BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_0428
         (122 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QPK3|A0QPK3_MYCS2 Tax_Id=246196 SubName: Full=Nitrite reduc...   246   7e-64
tr|Q1BFF4|Q1BFF4_MYCSS Tax_Id=164756 SubName: Full=Nitrite reduc...   182   1e-44
tr|A3PT35|A3PT35_MYCSJ Tax_Id=164757 SubName: Full=Nitrite reduc...   182   1e-44
tr|A1U9H8|A1U9H8_MYCSK Tax_Id=189918 SubName: Full=Nitrite reduc...   182   1e-44
tr|A1T1U7|A1T1U7_MYCVP Tax_Id=350058 SubName: Full=Nitrite reduc...   173   7e-42
tr|A0QM86|A0QM86_MYCA1 Tax_Id=243243 (nirD)SubName: Full=Nitrite...   168   2e-40
tr|D5PAY4|D5PAY4_9MYCO Tax_Id=525368 (nirD)SubName: Full=Nitrite...   166   1e-39
tr|B2HN42|B2HN42_MYCMM Tax_Id=216594 (nirD)SubName: Full=Nitrite...   165   1e-39
tr|Q7U2G1|Q7U2G1_MYCBO Tax_Id=1765 (nirD)SubName: Full=PROBABLE ...   164   3e-39
tr|O53675|O53675_MYCTU Tax_Id=1773 (nirD)SubName: Full=PROBABLE ...   164   3e-39
tr|C6DRR0|C6DRR0_MYCTK Tax_Id=478434 SubName: Full=Nitrite reduc...   164   3e-39
tr|C1AJS9|C1AJS9_MYCBT Tax_Id=561275 (nirD)SubName: Full=Putativ...   164   3e-39
tr|A5WIW0|A5WIW0_MYCTF Tax_Id=336982 SubName: Full=Nitrite reduc...   164   3e-39
tr|A5TYX9|A5TYX9_MYCTA Tax_Id=419947 (nirD)SubName: Full=Putativ...   164   3e-39
tr|A1KF74|A1KF74_MYCBP Tax_Id=410289 (nirD)SubName: Full=Probabl...   164   3e-39
tr|D6G9B2|D6G9B2_MYCTU Tax_Id=478435 SubName: Full=Nitrite reduc...   164   3e-39
tr|D6FWT5|D6FWT5_MYCTU Tax_Id=611304 SubName: Full=Nitrite reduc...   164   3e-39
tr|D6FD87|D6FD87_MYCTU Tax_Id=611303 SubName: Full=Nitrite reduc...   164   3e-39
tr|D6F0J8|D6F0J8_MYCTU Tax_Id=611302 SubName: Full=Nitrite reduc...   164   3e-39
tr|D5ZBV9|D5ZBV9_MYCTU Tax_Id=537210 SubName: Full=Nitrite reduc...   164   3e-39
tr|D5ZA58|D5ZA58_MYCTU Tax_Id=537209 SubName: Full=Nitrite reduc...   164   3e-39
tr|D5YZA7|D5YZA7_MYCTU Tax_Id=515616 SubName: Full=Nitrite reduc...   164   3e-39
tr|D5YMU0|D5YMU0_MYCTU Tax_Id=520140 SubName: Full=Nitrite reduc...   164   3e-39
tr|D5YBA1|D5YBA1_MYCTU Tax_Id=520141 SubName: Full=Nitrite reduc...   164   3e-39
tr|D5XN74|D5XN74_MYCTU Tax_Id=515617 SubName: Full=Nitrite reduc...   164   3e-39
tr|A4KNS1|A4KNS1_MYCTU Tax_Id=395095 SubName: Full=Nitrite reduc...   164   3e-39
tr|A2VNG8|A2VNG8_MYCTU Tax_Id=348776 SubName: Full=Nitrite reduc...   164   3e-39
tr|A0PN38|A0PN38_MYCUA Tax_Id=362242 (nirD)SubName: Full=Nitrite...   163   6e-39
tr|A4T0N9|A4T0N9_MYCGI Tax_Id=350054 SubName: Full=Nitrite reduc...   157   4e-37
tr|Q5YQY0|Q5YQY0_NOCFA Tax_Id=37329 (nirD)SubName: Full=Putative...   140   7e-32
tr|D5UWY5|D5UWY5_TSUPA Tax_Id=521096 SubName: Full=Nitrite reduc...   137   4e-31
tr|C1B1I0|C1B1I0_RHOOB Tax_Id=632772 (nirD)SubName: Full=Nitrite...   130   5e-29
tr|Q0S2U2|Q0S2U2_RHOSR Tax_Id=101510 SubName: Full=Nitrite reduc...   129   1e-28
tr|Q73TL5|Q73TL5_MYCPA Tax_Id=1770 (nirD)SubName: Full=NirD;[Myc...   129   2e-28
tr|D5PQE5|D5PQE5_COREQ Tax_Id=525370 (nirD)SubName: Full=Nitrite...   126   1e-27
tr|C3JKV2|C3JKV2_RHOER Tax_Id=596309 (nirD)SubName: Full=Nitrite...   120   7e-26
tr|C0ZX31|C0ZX31_RHOE4 Tax_Id=234621 (nirD)SubName: Full=Putativ...   119   9e-26
tr|B1MEZ1|B1MEZ1_MYCA9 Tax_Id=561007 SubName: Full=Probable nitr...   115   2e-24
tr|D2AU03|D2AU03_STRRD Tax_Id=479432 SubName: Full=Nitrite reduc...   109   1e-22
tr|D4SCG0|D4SCG0_9ACTO Tax_Id=585531 (nasB)SubName: Full=Nitrate...   108   2e-22
tr|C7QIF1|C7QIF1_CATAD Tax_Id=479433 SubName: Full=Nitrite reduc...   108   3e-22
tr|D1A3S1|D1A3S1_THECD Tax_Id=471852 SubName: Full=Nitrite reduc...   107   4e-22
tr|D6AUU0|D6AUU0_STRFL Tax_Id=457431 SubName: Full=Nitrite reduc...   107   4e-22
tr|C6WM66|C6WM66_ACTMD Tax_Id=446462 SubName: Full=Nitrite reduc...   107   6e-22
tr|D0LF04|D0LF04_GORB4 Tax_Id=526226 SubName: Full=Nitrite reduc...   105   2e-21

>tr|A0QPK3|A0QPK3_MYCS2 Tax_Id=246196 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit;
           EC=1.7.1.4;[Mycobacterium smegmatis]
          Length = 122

 Score =  246 bits (628), Expect = 7e-64
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNID 60
           MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNID
Sbjct: 1   MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNID 60

Query: 61  PFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVE 120
           PFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVE
Sbjct: 61  PFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVE 120

Query: 121 IA 122
           IA
Sbjct: 121 IA 122


>tr|Q1BFF4|Q1BFF4_MYCSS Tax_Id=164756 SubName: Full=Nitrite
           reductase (NAD(P)H) large subunit, NirD;[Mycobacterium
           sp.]
          Length = 123

 Score =  182 bits (462), Expect = 1e-44
 Identities = 91/121 (75%), Positives = 99/121 (81%)

Query: 1   MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNID 60
           MTL DDR ++     + WT AC YD+LIP RGV VLL DG+QAALF+LDDGS+HAIGNID
Sbjct: 1   MTLLDDRNELNGPPDTRWTVACRYDYLIPCRGVGVLLPDGAQAALFRLDDGSLHAIGNID 60

Query: 61  PFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVE 120
           PFSGAAVMSRGITGDRGG   VQSPIKKQAFA  DG CLDDP VSLPVYRTR +ADG VE
Sbjct: 61  PFSGAAVMSRGITGDRGGRAIVQSPIKKQAFAFDDGSCLDDPSVSLPVYRTRRTADGIVE 120

Query: 121 I 121
           I
Sbjct: 121 I 121


>tr|A3PT35|A3PT35_MYCSJ Tax_Id=164757 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Mycobacterium sp.]
          Length = 123

 Score =  182 bits (462), Expect = 1e-44
 Identities = 91/121 (75%), Positives = 99/121 (81%)

Query: 1   MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNID 60
           MTL DDR ++     + WT AC YD+LIP RGV VLL DG+QAALF+LDDGS+HAIGNID
Sbjct: 1   MTLLDDRNELNGPPDTRWTVACRYDYLIPCRGVGVLLPDGAQAALFRLDDGSLHAIGNID 60

Query: 61  PFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVE 120
           PFSGAAVMSRGITGDRGG   VQSPIKKQAFA  DG CLDDP VSLPVYRTR +ADG VE
Sbjct: 61  PFSGAAVMSRGITGDRGGRAIVQSPIKKQAFAFDDGSCLDDPSVSLPVYRTRRTADGIVE 120

Query: 121 I 121
           I
Sbjct: 121 I 121


>tr|A1U9H8|A1U9H8_MYCSK Tax_Id=189918 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Mycobacterium sp.]
          Length = 123

 Score =  182 bits (462), Expect = 1e-44
 Identities = 91/121 (75%), Positives = 99/121 (81%)

Query: 1   MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNID 60
           MTL DDR ++     + WT AC YD+LIP RGV VLL DG+QAALF+LDDGS+HAIGNID
Sbjct: 1   MTLLDDRNELNGPPDTRWTVACRYDYLIPCRGVGVLLPDGAQAALFRLDDGSLHAIGNID 60

Query: 61  PFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVE 120
           PFSGAAVMSRGITGDRGG   VQSPIKKQAFA  DG CLDDP VSLPVYRTR +ADG VE
Sbjct: 61  PFSGAAVMSRGITGDRGGRAIVQSPIKKQAFAFDDGSCLDDPSVSLPVYRTRRTADGIVE 120

Query: 121 I 121
           I
Sbjct: 121 I 121


>tr|A1T1U7|A1T1U7_MYCVP Tax_Id=350058 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Mycobacterium
           vanbaalenii]
          Length = 115

 Score =  173 bits (438), Expect = 7e-42
 Identities = 88/122 (72%), Positives = 97/122 (79%), Gaps = 8/122 (6%)

Query: 1   MTLTDDRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNID 60
           MTL +D K         WT AC YDFLIP RGV VLL DG+QAALF+LDDG+VHA+GNID
Sbjct: 1   MTLLNDVKT--------WTTACRYDFLIPNRGVGVLLPDGAQAALFRLDDGTVHAVGNID 52

Query: 61  PFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVE 120
           PFSGAAVMSRGI GDRGG  TVQSPIKKQAFAL DG CLDDP+ SLPVY TRI+ DG V+
Sbjct: 53  PFSGAAVMSRGIVGDRGGRATVQSPIKKQAFALDDGTCLDDPDHSLPVYETRITPDGEVQ 112

Query: 121 IA 122
           +A
Sbjct: 113 LA 114


>tr|A0QM86|A0QM86_MYCA1 Tax_Id=243243 (nirD)SubName: Full=Nitrite
           reductase [NAD(P)H], small subunit;
           EC=1.7.1.4;[Mycobacterium avium]
          Length = 122

 Score =  168 bits (425), Expect = 2e-40
 Identities = 78/104 (75%), Positives = 90/104 (86%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT AC+YD LIPGRGV VLL DGSQAALF+LDDG+V A+GN+DPFSGAAV+SRGI GDR 
Sbjct: 10  WTSACSYDHLIPGRGVGVLLDDGSQAALFRLDDGTVRAVGNVDPFSGAAVLSRGIVGDRN 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
           GC TVQSPI KQAF+L DG CLDDP VS+PVY  RI+ADG+V++
Sbjct: 70  GCPTVQSPILKQAFSLEDGTCLDDPSVSVPVYPVRITADGYVQV 113


>tr|D5PAY4|D5PAY4_9MYCO Tax_Id=525368 (nirD)SubName: Full=Nitrite
           reductase small subunit; EC=1.7.1.4;[Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 118

 Score =  166 bits (419), Expect = 1e-39
 Identities = 78/104 (75%), Positives = 90/104 (86%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT AC YD LIPGRGV VLL DGSQAALF+LDDGSV+A+GN+DPFSGAAV+SRGI GDRG
Sbjct: 10  WTTACEYDRLIPGRGVGVLLDDGSQAALFRLDDGSVYAVGNVDPFSGAAVLSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
           G +TVQSPI KQAF+L DG CLDDP  S+PVY  R++ADGFV++
Sbjct: 70  GRVTVQSPILKQAFSLEDGSCLDDPNFSVPVYPARVTADGFVQV 113


>tr|B2HN42|B2HN42_MYCMM Tax_Id=216594 (nirD)SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit NirD;[Mycobacterium
           marinum]
          Length = 118

 Score =  165 bits (418), Expect = 1e-39
 Identities = 79/105 (75%), Positives = 90/105 (85%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQAALF+LDDGSVHA+GNIDPFSGAAV+SRGI GDR 
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQAALFRLDDGSVHALGNIDPFSGAAVLSRGIVGDRD 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI+KQAFAL DG CLDDP VS+PVY  R++A+G +++A
Sbjct: 70  GRAAVQSPIQKQAFALDDGSCLDDPRVSVPVYPARVTAEGKIQVA 114


>tr|Q7U2G1|Q7U2G1_MYCBO Tax_Id=1765 (nirD)SubName: Full=PROBABLE
           NITRITE REDUCTASE; EC=1.6.6.4;[Mycobacterium bovis]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|O53675|O53675_MYCTU Tax_Id=1773 (nirD)SubName: Full=PROBABLE
           NITRITE REDUCTASE [NAD(P)H] SMALL SUBUNIT NIRD;
           EC=1.6.6.4;[Mycobacterium tuberculosis]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|C6DRR0|C6DRR0_MYCTK Tax_Id=478434 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|C1AJS9|C1AJS9_MYCBT Tax_Id=561275 (nirD)SubName: Full=Putative
           nitrite reductase [NAD(P)H] small subunit;
           EC=1.7.1.4;[Mycobacterium bovis]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|A5WIW0|A5WIW0_MYCTF Tax_Id=336982 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|A5TYX9|A5TYX9_MYCTA Tax_Id=419947 (nirD)SubName: Full=Putative
           nitrite reductase;[Mycobacterium tuberculosis]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|A1KF74|A1KF74_MYCBP Tax_Id=410289 (nirD)SubName: Full=Probable
           nitrite reductase [NAD(P)H] small subunit nirD;
           EC=1.7.1.4;[Mycobacterium bovis]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D6G9B2|D6G9B2_MYCTU Tax_Id=478435 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis KZN 605]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D6FWT5|D6FWT5_MYCTU Tax_Id=611304 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis K85]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D6FD87|D6FD87_MYCTU Tax_Id=611303 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis CPHL_A]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D6F0J8|D6F0J8_MYCTU Tax_Id=611302 SubName: Full=Nitrite
           reductase [NAD(P)H], small subunit;[Mycobacterium
           tuberculosis T46]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D5ZBV9|D5ZBV9_MYCTU Tax_Id=537210 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis T17]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D5ZA58|D5ZA58_MYCTU Tax_Id=537209 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis GM 1503]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D5YZA7|D5YZA7_MYCTU Tax_Id=515616 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis 02_1987]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D5YMU0|D5YMU0_MYCTU Tax_Id=520140 SubName: Full=Nitrite
           reductase small subunit NirD;[Mycobacterium tuberculosis
           EAS054]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D5YBA1|D5YBA1_MYCTU Tax_Id=520141 SubName: Full=Nitrite
           reductase small subunit NirD;[Mycobacterium tuberculosis
           T85]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|D5XN74|D5XN74_MYCTU Tax_Id=515617 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis T92]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|A4KNS1|A4KNS1_MYCTU Tax_Id=395095 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 118

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 70  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 114


>tr|A2VNG8|A2VNG8_MYCTU Tax_Id=348776 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit nirD;[Mycobacterium
           tuberculosis C]
          Length = 135

 Score =  164 bits (415), Expect = 3e-39
 Identities = 78/105 (74%), Positives = 88/105 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQ ALF+LDDGSVHA+GN+DPFSGAAVMSRGI GDRG
Sbjct: 27  WTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRG 86

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI KQAFAL DG CLDDP VS+PVY  R++ +G +++A
Sbjct: 87  GRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVA 131


>tr|A0PN38|A0PN38_MYCUA Tax_Id=362242 (nirD)SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit NirD;[Mycobacterium
           ulcerans]
          Length = 118

 Score =  163 bits (413), Expect = 6e-39
 Identities = 78/105 (74%), Positives = 90/105 (85%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT ACAYD LIPGRGV VLL DGSQAALF+LDDGSVHA+GNIDPFSGAAV+SRGI GDR 
Sbjct: 10  WTTACAYDHLIPGRGVGVLLDDGSQAALFRLDDGSVHALGNIDPFSGAAVLSRGIVGDRD 69

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G   VQSPI+KQAFAL DG CLDDP VS+PV+  R++A+G +++A
Sbjct: 70  GRAAVQSPIQKQAFALDDGSCLDDPRVSVPVHPARVTAEGKIQVA 114


>tr|A4T0N9|A4T0N9_MYCGI Tax_Id=350054 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Mycobacterium
           gilvum]
          Length = 119

 Score =  157 bits (397), Expect = 4e-37
 Identities = 76/104 (73%), Positives = 87/104 (83%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           W  AC YDFLIP RGV VLL +G QAALF+LDDG++ A+GNIDPFSGAAVMSRGI GDRG
Sbjct: 14  WITACRYDFLIPNRGVGVLLPEGEQAALFRLDDGTLCAVGNIDPFSGAAVMSRGIVGDRG 73

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
           G LTVQSPIKKQAFAL DG CLD+ + +LPVY TRI+ DG V++
Sbjct: 74  GRLTVQSPIKKQAFALDDGSCLDNSDYALPVYPTRITEDGVVQV 117


>tr|Q5YQY0|Q5YQY0_NOCFA Tax_Id=37329 (nirD)SubName: Full=Putative
           nitrite reductase (NAD(P)H) subunit;[Nocardia farcinica]
          Length = 131

 Score =  140 bits (352), Expect = 7e-32
 Identities = 70/117 (59%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 6   DRKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGA 65
           D   +   T + WT+AC  DFLIPGRGVAVLL  G QAALF L DG+++A+GNIDPF  A
Sbjct: 5   DTPSISPATATGWTQACRLDFLIPGRGVAVLLRGGRQAALFLLPDGTLYAVGNIDPFGRA 64

Query: 66  AVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           AVMSRGI GDRGG   V SP+ KQAF+L+DG CLDD   +LPVY  R+  DG V ++
Sbjct: 65  AVMSRGIVGDRGGVPVVASPLLKQAFSLLDGHCLDDESAALPVYAVRVD-DGIVSVS 120


>tr|D5UWY5|D5UWY5_TSUPA Tax_Id=521096 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Tsukamurella
           paurometabola DSM 20162]
          Length = 136

 Score =  137 bits (345), Expect = 4e-31
 Identities = 70/106 (66%), Positives = 80/106 (75%)

Query: 17  EWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDR 76
           +WT AC    L P RGVAVLL DG+Q ALF+L D S+ AIGNIDP   AAVMSRGI GDR
Sbjct: 14  DWTAACPVGRLEPLRGVAVLLPDGAQVALFRLADDSIRAIGNIDPIGRAAVMSRGIVGDR 73

Query: 77  GGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           GG   VQSP+KKQAF+L+DG CLD P+ S+PVY TRIS DG V +A
Sbjct: 74  GGFPVVQSPLKKQAFSLLDGRCLDAPDFSIPVYDTRISLDGTVFVA 119


>tr|C1B1I0|C1B1I0_RHOOB Tax_Id=632772 (nirD)SubName: Full=Nitrite
           reductase small subunit; EC=1.7.1.4;[Rhodococcus opacus]
          Length = 134

 Score =  130 bits (327), Expect = 5e-29
 Identities = 69/115 (60%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 7   RKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAA 66
           R + V     EWT AC    LIPG GVAVLL  G Q ALF L+DGS+HA+GNIDPF  AA
Sbjct: 16  RFESVKSGRLEWTSACPLSQLIPGLGVAVLLRGGEQVALFLLEDGSLHAVGNIDPFGRAA 75

Query: 67  VMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
           VMSRG+ GDR G  TV SP+ KQ F+LVDG CLDD  V LPVY  R+ A G V++
Sbjct: 76  VMSRGLVGDRAGEPTVASPLLKQVFSLVDGRCLDDESVRLPVYDVRVWA-GVVQV 129


>tr|Q0S2U2|Q0S2U2_RHOSR Tax_Id=101510 SubName: Full=Nitrite
           reductase [NAD(P)H] small subunit;
           EC=1.7.1.4;[Rhodococcus sp.]
          Length = 133

 Score =  129 bits (324), Expect = 1e-28
 Identities = 68/115 (59%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 7   RKDVVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAA 66
           R++ V     EWT AC    LIPG GVAVLL  G Q ALF L+DGS+ A+GNIDPF  AA
Sbjct: 15  RRESVKSGRLEWTSACPLSQLIPGLGVAVLLRGGEQVALFLLEDGSLRAVGNIDPFGRAA 74

Query: 67  VMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
           VMSRG+ GDR G  TV SP+ KQ F+LVDG CLDD  V LPVY  R+ A G V++
Sbjct: 75  VMSRGLVGDRAGEPTVASPLLKQVFSLVDGRCLDDESVRLPVYDVRVWA-GVVQV 128


>tr|Q73TL5|Q73TL5_MYCPA Tax_Id=1770 (nirD)SubName:
           Full=NirD;[Mycobacterium paratuberculosis]
          Length = 99

 Score =  129 bits (323), Expect = 2e-28
 Identities = 59/81 (72%), Positives = 71/81 (87%)

Query: 41  SQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLD 100
           SQAALF+LDDG+V A+GN+DPFSGAAV+SRGI GDR GC TVQSPI KQAF+L DG+CLD
Sbjct: 10  SQAALFRLDDGTVRAVGNVDPFSGAAVLSRGIVGDRNGCPTVQSPILKQAFSLEDGICLD 69

Query: 101 DPEVSLPVYRTRISADGFVEI 121
           DP VS+PVY  RI+AD +V++
Sbjct: 70  DPSVSVPVYPVRITADSYVQV 90


>tr|D5PQE5|D5PQE5_COREQ Tax_Id=525370 (nirD)SubName: Full=Nitrite
           reductase; EC=1.7.1.4;[Rhodococcus equi ATCC 33707]
          Length = 140

 Score =  126 bits (316), Expect = 1e-27
 Identities = 63/96 (65%), Positives = 72/96 (75%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT AC    LIPGRGVAVLL  G+QAALF+L DGS+ A+GNIDP + AAVMSRG+ GDR 
Sbjct: 26  WTSACTRSHLIPGRGVAVLLRGGAQAALFRLADGSLRAVGNIDPVARAAVMSRGLVGDRH 85

Query: 78  GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRI 113
           G  TV SP+ KQ F+LVDG CLDD  V LPVY  R+
Sbjct: 86  GEPTVASPLLKQVFSLVDGRCLDDASVRLPVYPVRV 121


>tr|C3JKV2|C3JKV2_RHOER Tax_Id=596309 (nirD)SubName: Full=Nitrite
           reductase [NAD(P)H], small subunit;
           EC=1.7.1.4;[Rhodococcus erythropolis SK121]
          Length = 137

 Score =  120 bits (300), Expect = 7e-26
 Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 1/105 (0%)

Query: 17  EWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDR 76
           EWT AC    LIPGRGVAVLL  G Q ALF L+DG++ A+ N DP+  AAVMSRG+ GDR
Sbjct: 17  EWTSACPLSHLIPGRGVAVLLRGGEQVALFLLEDGTLRAVSNFDPYGRAAVMSRGLVGDR 76

Query: 77  GGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
            G   V SP+ KQAF+LVDG  LDD  V+LPVY  R+ A G V++
Sbjct: 77  DGEPIVVSPLLKQAFSLVDGRALDDSSVALPVYGVRVWA-GVVQV 120


>tr|C0ZX31|C0ZX31_RHOE4 Tax_Id=234621 (nirD)SubName: Full=Putative
           nitrite reductase small subunit; EC=1.7.1.4;[Rhodococcus
           erythropolis]
          Length = 137

 Score =  119 bits (299), Expect = 9e-26
 Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 1/105 (0%)

Query: 17  EWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDR 76
           EWT AC    LIPGRGVAVLL  G Q ALF L+DG++ A+ N DP+  AAVMSRG+ GDR
Sbjct: 17  EWTSACPLSHLIPGRGVAVLLRGGEQVALFLLEDGTLRAVSNFDPYGRAAVMSRGLVGDR 76

Query: 77  GGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
            G   V SP+ KQAF+LVDG  LDD  V+LPVY  R+ A G V++
Sbjct: 77  DGEPIVVSPLLKQAFSLVDGRALDDSAVALPVYGVRVWA-GVVQV 120


>tr|B1MEZ1|B1MEZ1_MYCA9 Tax_Id=561007 SubName: Full=Probable nitrite
           reductase;[Mycobacterium abscessus]
          Length = 110

 Score =  115 bits (288), Expect = 2e-24
 Identities = 60/97 (61%), Positives = 71/97 (73%), Gaps = 1/97 (1%)

Query: 25  DFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRGGCLTVQS 84
           D L PGRG AVLLAD  QAALF +  G ++A+GNIDPF  AAVMSRG+TGDRGG  TV S
Sbjct: 2   DSLTPGRGAAVLLADDVQAALFLMPSGELYAVGNIDPFGQAAVMSRGLTGDRGGEPTVAS 61

Query: 85  PIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
           P+ KQ F+L+DG CLDD    LPV+  R+  +G VEI
Sbjct: 62  PLLKQVFSLIDGRCLDDASRRLPVFEVRV-INGNVEI 97


>tr|D2AU03|D2AU03_STRRD Tax_Id=479432 SubName: Full=Nitrite
           reductase (NAD(P)H);[Streptosporangium roseum]
          Length = 116

 Score =  109 bits (273), Expect = 1e-22
 Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 2/109 (1%)

Query: 14  THSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGIT 73
           T + WT  CAY  L+P RG   L+    Q ALF+  DG + AIGN DPFSGA V+SRGI 
Sbjct: 8   TTTVWTAVCAYTDLLPERGACALVGR-HQIALFRTFDGELFAIGNRDPFSGAQVLSRGIV 66

Query: 74  GDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           G R G  +V SP+ K+ F+LV GVCLDDP V++P Y  R+ ADG VE++
Sbjct: 67  GTRAGEPSVASPMHKEVFSLVTGVCLDDPAVAVPTYPIRV-ADGTVEVS 114


>tr|D4SCG0|D4SCG0_9ACTO Tax_Id=585531 (nasB)SubName: Full=Nitrate
           reductase electron transfer subunit;
           EC=1.7.1.4;[Aeromicrobium marinum DSM 15272]
          Length = 113

 Score =  108 bits (271), Expect = 2e-22
 Identities = 61/107 (57%), Positives = 72/107 (67%), Gaps = 3/107 (2%)

Query: 16  SEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGS-VHAIGNIDPFSGAAVMSRGITG 74
           S W R C  D L+P RG A L+  G Q ALF+   G  VHA+G+ DPFSGA VM+RG+ G
Sbjct: 2   SRWQRVCRLDDLLPDRGAAALVG-GIQIALFRSATGERVHAVGHRDPFSGANVMARGLVG 60

Query: 75  DRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
            R G  TV SP+ KQ F LV G+CLDDPEV L V+ TRI  DG+VEI
Sbjct: 61  TRQGVPTVASPMHKQTFDLVTGLCLDDPEVGLDVWPTRI-MDGWVEI 106


>tr|C7QIF1|C7QIF1_CATAD Tax_Id=479433 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Catenulispora
           acidiphila]
          Length = 140

 Score =  108 bits (269), Expect = 3e-22
 Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 18  WTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRG 77
           WT  C Y  L PGRGVA L+AD    A+F+L DGS++A+GN+DPF GA+V+SRGITG RG
Sbjct: 16  WTAVCKYTDLEPGRGVAALVAD-EPVAVFRLSDGSLYAVGNVDPFCGASVISRGITGMRG 74

Query: 78  -GCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTR 112
            G  TV SP+ K  F L  GV LD PEV LPV+  R
Sbjct: 75  DGTATVASPMYKDVFDLATGVALDTPEVRLPVFAVR 110


>tr|D1A3S1|D1A3S1_THECD Tax_Id=471852 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Thermomonospora
           curvata]
          Length = 124

 Score =  107 bits (268), Expect = 4e-22
 Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 1/113 (0%)

Query: 10  VVAQTHSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMS 69
           V  Q  + W + C YD L+P RGV  L+ +G Q A+F+  DG + A+ N DPFSGA V++
Sbjct: 11  VPPQPTTRWHQVCRYDDLLPERGVCALV-EGVQVAIFRTFDGELFALSNFDPFSGAYVIA 69

Query: 70  RGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEIA 122
           RGI G RGG  TV SP+ KQ F L  G CLDD +V+LP +R R +  G VE+A
Sbjct: 70  RGIVGTRGGIPTVASPMYKQVFDLRTGRCLDDGQVALPTFRIRRTPAGGVEVA 122


>tr|D6AUU0|D6AUU0_STRFL Tax_Id=457431 SubName: Full=Nitrite
           reductase (NAD(P)H) small subunit;[Streptomyces
           roseosporus NRRL 15998]
          Length = 119

 Score =  107 bits (268), Expect = 4e-22
 Identities = 54/96 (56%), Positives = 63/96 (65%)

Query: 17  EWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDR 76
           +W   C    LIPGRGVAVLL DG QAA+F    G V+AIGN DPF+GA V+SRG+ G  
Sbjct: 22  DWLTVCERGLLIPGRGVAVLLPDGDQAAVFMDRSGQVYAIGNRDPFTGAYVLSRGLLGSA 81

Query: 77  GGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTR 112
           GG   V SP+ KQ F L  G CLDD E S+PV+  R
Sbjct: 82  GGRPFVASPLLKQRFDLATGACLDDEEASVPVFAVR 117


>tr|C6WM66|C6WM66_ACTMD Tax_Id=446462 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Actinosynnema mirum]
          Length = 130

 Score =  107 bits (266), Expect = 6e-22
 Identities = 55/100 (55%), Positives = 66/100 (66%), Gaps = 1/100 (1%)

Query: 22  CAYDFLIPGRGVAVLLADGSQAALFKLDDGSVHAIGNIDPFSGAAVMSRGITGDRGGCLT 81
           C    L P RGVA LL DG+Q A+F   DG +HA+GN+DPFSGAAV+SRGI GDRGG   
Sbjct: 29  CDLSALQPERGVAALLPDGTQVAVFLTSDGGLHALGNVDPFSGAAVLSRGIVGDRGGVPV 88

Query: 82  VQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
           V SP+ KQAF L  G CLDDP V +  Y   +  +G V +
Sbjct: 89  VISPLYKQAFELSTGRCLDDPAVVVESYPVSV-VEGVVRV 127


>tr|D0LF04|D0LF04_GORB4 Tax_Id=526226 SubName: Full=Nitrite
           reductase (NAD(P)H), small subunit;[Gordonia
           bronchialis]
          Length = 134

 Score =  105 bits (261), Expect = 2e-21
 Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 12/119 (10%)

Query: 14  THSEWTRACAYDFLIPGRGVAVLLADGSQAALFKLDDGS-----------VHAIGNIDPF 62
           T   W  AC  D LI GRGVAVL  DG QAALF++               ++AIGNIDPF
Sbjct: 13  TTGAWIPACPIDDLIVGRGVAVLGPDGVQAALFRIPAVETDREAAPGRTRLYAIGNIDPF 72

Query: 63  SGAAVMSRGITGDRGGCLTVQSPIKKQAFALVDGVCLDDPEVSLPVYRTRISADGFVEI 121
             AAV+SRG+TGDR G  TV SP+ KQ FAL  GVCLDD  VS+P +  R+  D  VE+
Sbjct: 73  GRAAVLSRGLTGDRAGEPTVASPLGKQVFALRTGVCLDDESVSVPSFGVRV-IDRVVEV 130


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.321    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,018,924,907
Number of extensions: 37419871
Number of successful extensions: 76887
Number of sequences better than 10.0: 540
Number of HSP's gapped: 77634
Number of HSP's successfully gapped: 540
Length of query: 122
Length of database: 4,236,830,644
Length adjustment: 88
Effective length of query: 34
Effective length of database: 3,136,138,612
Effective search space: 106628712808
Effective search space used: 106628712808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)