BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_0545 (175 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QPW8|A0QPW8_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 336 6e-91 tr|D5PBU5|D5PBU5_9MYCO Tax_Id=525368 SubName: Full=LuxR family t... 124 4e-27 tr|D5PFJ5|D5PFJ5_9MYCO Tax_Id=525368 SubName: Full=LuxR family t... 117 7e-25 tr|B2HEY2|B2HEY2_MYCMM Tax_Id=216594 SubName: Full=Transcription... 111 4e-23 tr|A1THP1|A1THP1_MYCVP Tax_Id=350058 SubName: Full=Regulatory pr... 106 9e-22 tr|B2HJC4|B2HJC4_MYCMM Tax_Id=216594 SubName: Full=Transcription... 105 2e-21 tr|Q7U243|Q7U243_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC... 103 6e-21 tr|O53720|O53720_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSC... 103 6e-21 tr|C6DSH6|C6DSH6_MYCTK Tax_Id=478434 SubName: Full=Transcription... 103 6e-21 tr|C1AK61|C1AK61_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 103 6e-21 tr|A5WJ95|A5WJ95_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 103 6e-21 tr|A5TZB3|A5TZB3_MYCTA Tax_Id=419947 SubName: Full=LuxR family t... 103 6e-21 tr|A1KFK7|A1KFK7_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 103 6e-21 tr|Q7D9W9|Q7D9W9_MYCTU Tax_Id=1773 SubName: Full=Transcriptional... 103 6e-21 tr|D6G9K2|D6G9K2_MYCTU Tax_Id=478435 SubName: Full=Transcription... 103 6e-21 tr|D6FXK8|D6FXK8_MYCTU Tax_Id=611304 SubName: Full=Transcription... 103 6e-21 tr|D6FDM5|D6FDM5_MYCTU Tax_Id=611303 SubName: Full=Transcription... 103 6e-21 tr|D6F0Y3|D6F0Y3_MYCTU Tax_Id=611302 SubName: Full=Transcription... 103 6e-21 tr|D5YZV5|D5YZV5_MYCTU Tax_Id=537209 SubName: Full=LuxR family t... 103 6e-21 tr|D5YN17|D5YN17_MYCTU Tax_Id=515616 SubName: Full=LuxR family t... 103 6e-21 tr|D5YC64|D5YC64_MYCTU Tax_Id=520140 SubName: Full=LuxR/UHPA fam... 103 6e-21 tr|D5Y046|D5Y046_MYCTU Tax_Id=520141 SubName: Full=Transcription... 103 6e-21 tr|D5XPZ6|D5XPZ6_MYCTU Tax_Id=515617 SubName: Full=LuxR family t... 103 6e-21 tr|A2VF81|A2VF81_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 103 6e-21 sp|P59970|Y915_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized p... 100 5e-20 sp|Q10551|Y891_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized p... 100 5e-20 tr|C6DWK2|C6DWK2_MYCTK Tax_Id=478434 SubName: Full=Transcription... 100 5e-20 tr|C1ALM5|C1ALM5_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 100 5e-20 tr|A5WKR4|A5WKR4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 100 5e-20 tr|A5U0T0|A5U0T0_MYCTA Tax_Id=419947 SubName: Full=Putative tran... 100 5e-20 tr|A1KH23|A1KH23_MYCBP Tax_Id=410289 SubName: Full=Possible tran... 100 5e-20 tr|D6G1R5|D6G1R5_MYCTU Tax_Id=478435 SubName: Full=Transcription... 100 5e-20 tr|D6FNZ5|D6FNZ5_MYCTU Tax_Id=611304 SubName: Full=Transcription... 100 5e-20 tr|D6FF59|D6FF59_MYCTU Tax_Id=611303 SubName: Full=Transcription... 100 5e-20 tr|D6F2H1|D6F2H1_MYCTU Tax_Id=611302 SubName: Full=Transcription... 100 5e-20 tr|D5ZDW0|D5ZDW0_MYCTU Tax_Id=537210 SubName: Full=Transcription... 100 5e-20 tr|D5Z1D2|D5Z1D2_MYCTU Tax_Id=537209 SubName: Full=Transcription... 100 5e-20 tr|D5YPJ3|D5YPJ3_MYCTU Tax_Id=515616 SubName: Full=Transcription... 100 5e-20 tr|D5YD67|D5YD67_MYCTU Tax_Id=520140 SubName: Full=Transcription... 100 5e-20 tr|D5Y1L9|D5Y1L9_MYCTU Tax_Id=520141 SubName: Full=Predicted pro... 100 5e-20 tr|D5XRI9|D5XRI9_MYCTU Tax_Id=515617 SubName: Full=Transcription... 100 5e-20 tr|C6DMZ5|C6DMZ5_MYCTK Tax_Id=478434 SubName: Full=Transcription... 98 4e-19 tr|D6G4H4|D6G4H4_MYCTU Tax_Id=478435 SubName: Full=Transcription... 98 4e-19 tr|A4KFJ6|A4KFJ6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 96 2e-18 tr|D5Y578|D5Y578_MYCTU Tax_Id=520141 SubName: Full=Transcription... 95 3e-18 >tr|A0QPW8|A0QPW8_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, LuxR family protein;[Mycobacterium smegmatis] Length = 175 Score = 336 bits (862), Expect = 6e-91 Identities = 170/175 (97%), Positives = 170/175 (97%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGTLQRDASDS 60 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGTLQRDASDS Sbjct: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGTLQRDASDS 60 Query: 61 FVAAFDRASDAVMCALDLQLAPLEPFALCIGVHAVEHTDSADSDGAARLRDIARGGQTLI 120 FVAAFDRASDAVMCALDLQLAPLEPFALCIGVHAVEHTDSADSDGAARLRDIARGGQTLI Sbjct: 61 FVAAFDRASDAVMCALDLQLAPLEPFALCIGVHAVEHTDSADSDGAARLRDIARGGQTLI 120 Query: 121 SXXXXXLVSARMPAHAALTPLRDRVRHEPVYQLNHPGLRTEADEVPHLPYGRVVR 175 S LVSARMPAHAALTPLRDRVRHEPVYQLNHPGLRTEADEVPHLPYGRVVR Sbjct: 121 SAAAAALVSARMPAHAALTPLRDRVRHEPVYQLNHPGLRTEADEVPHLPYGRVVR 175 >tr|D5PBU5|D5PBU5_9MYCO Tax_Id=525368 SubName: Full=LuxR family transcriptional regulator; Flags: Fragment;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 1102 Score = 124 bits (311), Expect = 4e-27 Identities = 78/172 (45%), Positives = 104/172 (60%), Gaps = 14/172 (8%) Query: 4 KLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSF 61 +L TGT TLL+A V+ + LW+T+ D AA+ L ++ L+A + G +++ DSF Sbjct: 26 ELPTGTVTLLLADVEGSTRLWETQSDTMTAALEQLNQTVNDLVAAHGGVRPVEQGEGDSF 85 Query: 62 VAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRDIAR 114 V AF RASDAV CAL +QL+ L P + IG+H V+ D+ + G ARLRD+A Sbjct: 86 VLAFARASDAVACALQIQLSVLPPIRIRIGLHTGEVQLRDAGNYAGPTINRTARLRDLAH 145 Query: 115 GGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 GGQT++S LV R+PA A LT PLRD R E V QLNHPGLR + Sbjct: 146 GGQTVLSGATEPLVIDRLPADAWLTELGVHPLRDLPRPERVVQLNHPGLRND 197 >tr|D5PFJ5|D5PFJ5_9MYCO Tax_Id=525368 SubName: Full=LuxR family transcriptional regulator;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 1109 Score = 117 bits (292), Expect = 7e-25 Identities = 80/188 (42%), Positives = 106/188 (56%), Gaps = 17/188 (9%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 ++E L TGT TLL+A V+ + LW+T+ +Q AA+ L ++ + + G L++ Sbjct: 29 VSELLPTGTVTLLLADVEGSTRLWETQPEQMTAALARLNKTVNDAVDAHAGVRPLEQGEG 88 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFVAAF RASDAV CAL +Q APL P L IG+H ++ D A+ G ARLRD Sbjct: 89 DSFVAAFSRASDAVACALAVQRAPLAPIRLRIGIHTGEIQLRDDANYAGPTINRTARLRD 148 Query: 112 IARGGQTLISXXXXXLVSARMP-----AHAALTPLRDRVRHEPVYQLNHPGLRTEADEVP 166 +A GGQT++S +V R+P A PLRD R E V QL HP L A+E P Sbjct: 149 LAHGGQTVLSGATESMVVDRLPDGVWLADLGSYPLRDLPRPERVVQLCHPDL---ANEFP 205 Query: 167 HLPYGRVV 174 L G V Sbjct: 206 PLRVGSAV 213 >tr|B2HEY2|B2HEY2_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 1078 Score = 111 bits (277), Expect = 4e-23 Identities = 73/176 (41%), Positives = 93/176 (52%), Gaps = 15/176 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M E L T T TLL A ++ + L QT+ + AA+ L + ++ G +++ Sbjct: 1 MDELLLTDTVTLLSADIEDSARLRQTQPTELSAALERLDQILTDAVSAYGGVRAVEQSPG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHAVEHTDSADS--------DGAARLR 110 +S V AF RA DAV CAL LQ APL P LCIG+H E D D ARLR Sbjct: 61 ESLVVAFGRAQDAVECALQLQQAPLAPIRLCIGIHTGEVAQPRDDGTYVGPTIDRTARLR 120 Query: 111 DIARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 D+ARGGQTL+S +V ++P A LT PLRD + E V QL HP LR E Sbjct: 121 DLARGGQTLLSAATKDIVINQLPEQAWLTDRGLAPLRDLIHFERVAQLCHPNLRNE 176 >tr|A1THP1|A1THP1_MYCVP Tax_Id=350058 SubName: Full=Regulatory protein, LuxR;[Mycobacterium vanbaalenii] Length = 1085 Score = 106 bits (265), Expect = 9e-22 Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M+E + TGT TLL+A V + +LW+T+ + AA+ L ++ L++ +DG +++ Sbjct: 1 MSELVPTGTVTLLLADVQGSTQLWETQPETMTAAVAQLDRTLTDLVSDHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF RASDAV CAL LQ APL P L IGVH V D + G ARLR+ Sbjct: 61 DSFVVAFTRASDAVACALALQRAPLAPIRLRIGVHTGEVRLRDEGNYVGPTINRTARLRE 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALTP-----LRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV+ +P L+ LRD R E V QL H L E Sbjct: 121 LAHGGQTVLSGTTSDLVADLLPDGGWLSDLGTHRLRDLPRPERVVQLCHADLSNE 175 >tr|B2HJC4|B2HJC4_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein (LuxR-family);[Mycobacterium marinum] Length = 1117 Score = 105 bits (263), Expect = 2e-21 Identities = 71/178 (39%), Positives = 98/178 (55%), Gaps = 17/178 (9%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M E L TGT TLL+A V+ + LWQ + + AA+ L + +A +A + G +++ Sbjct: 24 MGELLPTGTVTLLLADVEGSTRLWQNQPEPMTAAVAHLDSVLATTVATHHGVRPVEQGEG 83 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADS--------DGAAR 108 DSFV AF A +A+ CALDLQ +PL P L IGVH ++ D D + AR Sbjct: 84 DSFVVAFASAREAIACALDLQRSPLGPIRLRIGVHTGDIQLRDPNDPTNYIGPTINRTAR 143 Query: 109 LRDIARGGQTLISXXXXXLVSARMP-----AHAALTPLRDRVRHEPVYQLNHPGLRTE 161 +R++A GGQT+IS LV ++P A L PLRD R E V QL H GL+ + Sbjct: 144 IRELAHGGQTVISGATQLLVVDQLPDGAWLADLGLHPLRDLPRPERVMQLCHSGLQND 201 >tr|Q7U243|Q7U243_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY LUXR/UHPA-FAMILY);[Mycobacterium bovis] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|O53720|O53720_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY LUXR/UHPA-FAMILY);[Mycobacterium tuberculosis] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|C6DSH6|C6DSH6_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator, luxR/uhpA-family;[Mycobacterium tuberculosis] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|C1AK61|C1AK61_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|A5WJ95|A5WJ95_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein, luxR/uhpA-family;[Mycobacterium tuberculosis] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|A5TZB3|A5TZB3_MYCTA Tax_Id=419947 SubName: Full=LuxR family transcriptional regulator;[Mycobacterium tuberculosis] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|A1KFK7|A1KFK7_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulatory protein (Probably luxR/uhpA-family);[Mycobacterium bovis] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|Q7D9W9|Q7D9W9_MYCTU Tax_Id=1773 SubName: Full=Transcriptional regulator, LuxR family;[Mycobacterium tuberculosis] Length = 1092 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 8 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 67 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 68 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 127 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 128 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 182 >tr|D6G9K2|D6G9K2_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator, luxR/uhpA-family;[Mycobacterium tuberculosis KZN 605] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|D6FXK8|D6FXK8_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator, luxR/uhpA-family;[Mycobacterium tuberculosis K85] Length = 486 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|D6FDM5|D6FDM5_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator, luxR/uhpA-family;[Mycobacterium tuberculosis CPHL_A] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|D6F0Y3|D6F0Y3_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator, luxR/uhpA-family;[Mycobacterium tuberculosis T46] Length = 791 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|D5YZV5|D5YZV5_MYCTU Tax_Id=537209 SubName: Full=LuxR family transcriptional regulator;[Mycobacterium tuberculosis GM 1503] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|D5YN17|D5YN17_MYCTU Tax_Id=515616 SubName: Full=LuxR family transcriptional regulator;[Mycobacterium tuberculosis 02_1987] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|D5YC64|D5YC64_MYCTU Tax_Id=520140 SubName: Full=LuxR/UHPA family transcriptional regulator;[Mycobacterium tuberculosis EAS054] Length = 1085 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >tr|D5Y046|D5Y046_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulator; Flags: Fragment;[Mycobacterium tuberculosis T85] Length = 943 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 8 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 67 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 68 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 127 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 128 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 182 >tr|D5XPZ6|D5XPZ6_MYCTU Tax_Id=515617 SubName: Full=LuxR family transcriptional regulator; Flags: Fragment;[Mycobacterium tuberculosis T92] Length = 846 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 8 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 67 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 68 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 127 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 128 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 182 >tr|A2VF81|A2VF81_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 1090 Score = 103 bits (258), Expect = 6e-21 Identities = 76/175 (43%), Positives = 97/175 (55%), Gaps = 14/175 (8%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 M++ L GT TLL+A V+ + LW+T D AA+ L +++ +IA +DG +++ Sbjct: 1 MSKLLPRGTVTLLLADVEGSTWLWETHPDDMGAAVARLDKAVSGVIAAHDGVRPVEQGEG 60 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTDSADSDG-----AARLRD 111 DSFV AF ASDAV ALDLQ A L P L IGVH V D + G ARLRD Sbjct: 61 DSFVLAFACASDAVAAALDLQRARLAPIRLRIGVHTGEVALRDEGNYAGPTINRTARLRD 120 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLRTE 161 +A GGQT++S LV R+P A L LRD R E V QL HP LR + Sbjct: 121 LAHGGQTVLSGVTESLVIDRLPDKAWLVDLGTHALRDLSRPERVMQLCHPELRID 175 >sp|P59970|Y915_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized protein Mb0915c;[Mycobacterium bovis] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >sp|Q10551|Y891_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv0891c/MT0915;[Mycobacterium tuberculosis] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|C6DWK2|C6DWK2_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|C1ALM5|C1ALM5_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|A5WKR4|A5WKR4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|A5U0T0|A5U0T0_MYCTA Tax_Id=419947 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|A1KH23|A1KH23_MYCBP Tax_Id=410289 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium bovis] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D6G1R5|D6G1R5_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis KZN 605] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D6FNZ5|D6FNZ5_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis K85] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D6FF59|D6FF59_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis CPHL_A] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D6F2H1|D6F2H1_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T46] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D5ZDW0|D5ZDW0_MYCTU Tax_Id=537210 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T17] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D5Z1D2|D5Z1D2_MYCTU Tax_Id=537209 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis GM 1503] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D5YPJ3|D5YPJ3_MYCTU Tax_Id=515616 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis 02_1987] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D5YD67|D5YD67_MYCTU Tax_Id=520140 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis EAS054] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D5Y1L9|D5Y1L9_MYCTU Tax_Id=520141 SubName: Full=Predicted protein;[Mycobacterium tuberculosis T85] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|D5XRI9|D5XRI9_MYCTU Tax_Id=515617 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T92] Length = 285 Score = 100 bits (250), Expect = 5e-20 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 13/166 (7%) Query: 7 TGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAA 64 TGT TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAA Sbjct: 88 TGTVTLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAA 147 Query: 65 FDRASDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQT 118 F RASDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ Sbjct: 148 FTRASDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQV 207 Query: 119 LISXXXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 ++S LV+ R+PA A L PLR R E V QL HP +R Sbjct: 208 VLSAATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 253 >tr|C6DMZ5|C6DMZ5_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator, luxR-family;[Mycobacterium tuberculosis] Length = 1137 Score = 97.8 bits (242), Expect = 4e-19 Identities = 70/172 (40%), Positives = 95/172 (55%), Gaps = 16/172 (9%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 ++E + TGT TLL+A ++ A L ++LD T AI L ++ L+ + G +++ Sbjct: 48 VSELVPTGTVTLLLADIEGATHLPGSQLDTT--AIAKLDRTLTELVREHRGVCPVEQGEG 105 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHAVEHTDSADS-------DGAARLRD 111 DSF+ AF RASDAV CAL LQ APL P L IG+H E + + D ARLR+ Sbjct: 106 DSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGEVSSPDEGNCVGPTIDRTARLRE 165 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALTP-----LRDRVRHEPVYQLNHPGL 158 +A GGQT++S LV+ +P A L L D R E V QL HPGL Sbjct: 166 LAHGGQTVLSGTTSDLVADLLPKDAWLNDLGTYRLDDLPRPERVVQLCHPGL 217 >tr|D6G4H4|D6G4H4_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator, luxR-family;[Mycobacterium tuberculosis KZN 605] Length = 1137 Score = 97.8 bits (242), Expect = 4e-19 Identities = 70/172 (40%), Positives = 95/172 (55%), Gaps = 16/172 (9%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 ++E + TGT TLL+A ++ A L ++LD T AI L ++ L+ + G +++ Sbjct: 48 VSELVPTGTVTLLLADIEGATHLPGSQLDTT--AIAKLDRTLTELVREHRGVCPVEQGEG 105 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHAVEHTDSADS-------DGAARLRD 111 DSF+ AF RASDAV CAL LQ APL P L IG+H E + + D ARLR+ Sbjct: 106 DSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGEVSSPDEGNCVGPTIDRTARLRE 165 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALTP-----LRDRVRHEPVYQLNHPGL 158 +A GGQT++S LV+ +P A L L D R E V QL HPGL Sbjct: 166 LAHGGQTVLSGTTSDLVADLLPKDAWLNDLGTYRLDDLPRPERVVQLCHPGL 217 >tr|A4KFJ6|A4KFJ6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 195 Score = 95.5 bits (236), Expect = 2e-18 Identities = 68/162 (41%), Positives = 87/162 (53%), Gaps = 13/162 (8%) Query: 11 TLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDASDSFVAAFDRA 68 TLL+A V+ + LWQ + AI L +++ I + G ++R DSFVAAF RA Sbjct: 2 TLLLADVEESTHLWQMCPEDMATAIAHLDHTVSEAITNHGGVQPVKRYEGDSFVAAFTRA 61 Query: 69 SDAVMCALDLQLAPLEPFALCIGVHA--VEHTD----SADSDGAARLRDIARGGQTLISX 122 SDA CALDLQ L P L IG+H V+ D + ARLRD+A GGQ ++S Sbjct: 62 SDAAACALDLQRTSLAPIRLRIGLHTGEVQLRDELYVGPTINRTARLRDLAHGGQVVLSA 121 Query: 123 XXXXLVSARMPAHAALT-----PLRDRVRHEPVYQLNHPGLR 159 LV+ R+PA A L PLR R E V QL HP +R Sbjct: 122 ATGDLVTGRLPADAWLVDLGRHPLRGLPRPEWVMQLCHPDIR 163 >tr|D5Y578|D5Y578_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulatory protein; Flags: Fragment;[Mycobacterium tuberculosis T85] Length = 317 Score = 95.1 bits (235), Expect = 3e-18 Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 16/172 (9%) Query: 1 MTEKLSTGTKTLLMARVDRAEELWQTELDQTIAAIPWLRASMAHLIALNDGT--LQRDAS 58 ++E + TGT TLL+A ++ A L ++LD T AI L ++ L+ + G +++ Sbjct: 48 VSELVPTGTVTLLLADIEGATHLPGSQLDTT--AIAKLDRTLTELVREHRGVCPVEQGEG 105 Query: 59 DSFVAAFDRASDAVMCALDLQLAPLEPFALCIGVHAVEHTDSADS-------DGAARLRD 111 DSF+ AF RASDAV CAL LQ APL P L IG+H E + + D ARLR+ Sbjct: 106 DSFLVAFARASDAVACALGLQRAPLAPIRLRIGMHTGEVSSPDEGNCVGPTIDRTARLRE 165 Query: 112 IARGGQTLISXXXXXLVSARMPAHAALTP-----LRDRVRHEPVYQLNHPGL 158 +A GGQT++S LV+ +P A L L D R E V QL HP L Sbjct: 166 LAHGGQTVLSGTTSDLVADLLPKDAWLNDLGTYRLDDLPRPERVVQLCHPDL 217 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.321 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,316,031,268 Number of extensions: 45773865 Number of successful extensions: 122708 Number of sequences better than 10.0: 167 Number of HSP's gapped: 123170 Number of HSP's successfully gapped: 167 Length of query: 175 Length of database: 4,236,830,644 Length adjustment: 128 Effective length of query: 47 Effective length of database: 2,635,824,052 Effective search space: 123883730444 Effective search space used: 123883730444 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 76 (33.9 bits)