BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_0601
         (102 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QQ24|A0QQ24_MYCS2 Tax_Id=246196 SubName: Full=Putative unch...   183   7e-45
tr|Q1BF51|Q1BF51_MYCSS Tax_Id=164756 SubName: Full=Putative unch...   130   4e-29
tr|A3PTD7|A3PTD7_MYCSJ Tax_Id=164757 SubName: Full=Putative unch...   130   4e-29
tr|A1U9T1|A1U9T1_MYCSK Tax_Id=189918 SubName: Full=Putative unch...   130   4e-29
tr|A4T0T4|A4T0T4_MYCGI Tax_Id=350054 SubName: Full=Putative unch...    87   9e-16
tr|D5PXS4|D5PXS4_COREQ Tax_Id=525370 SubName: Full=Putative unch...    83   9e-15
tr|A1T250|A1T250_MYCVP Tax_Id=350058 SubName: Full=Putative unch...    82   3e-14
tr|Q5YX06|Q5YX06_NOCFA Tax_Id=37329 SubName: Full=Putative uncha...    67   7e-10
tr|Q0S5D3|Q0S5D3_RHOSR Tax_Id=101510 SubName: Full=Putative unch...    65   3e-09
tr|B1MBI1|B1MBI1_MYCA9 Tax_Id=561007 SubName: Full=Putative unch...    63   1e-08
tr|B2HDY6|B2HDY6_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp...    60   1e-07
tr|A0PRK3|A0PRK3_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp...    60   1e-07
tr|Q7TWT3|Q7TWT3_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSM...    58   4e-07
tr|P96894|P96894_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE TRANSM...    58   4e-07
tr|C6DL26|C6DL26_MYCTK Tax_Id=478434 SubName: Full=Transmembrane...    58   4e-07
tr|C1AH63|C1AH63_MYCBT Tax_Id=561275 SubName: Full=Putative tran...    58   4e-07
tr|A5WSK4|A5WSK4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...    58   4e-07
tr|A5U7W3|A5U7W3_MYCTA Tax_Id=419947 SubName: Full=Putative tran...    58   4e-07
tr|A1KNU1|A1KNU1_MYCBP Tax_Id=410289 SubName: Full=Possible tran...    58   4e-07
tr|D6G379|D6G379_MYCTU Tax_Id=478435 SubName: Full=Transmembrane...    58   4e-07
tr|D6FRJ1|D6FRJ1_MYCTU Tax_Id=611304 SubName: Full=Transmembrane...    58   4e-07
tr|D6FLJ6|D6FLJ6_MYCTU Tax_Id=611303 SubName: Full=Transmembrane...    58   4e-07
tr|D6F9T9|D6F9T9_MYCTU Tax_Id=611302 SubName: Full=Transmembrane...    58   4e-07
tr|D5ZLG8|D5ZLG8_MYCTU Tax_Id=537210 SubName: Full=Transmembrane...    58   4e-07
tr|D5Z8D4|D5Z8D4_MYCTU Tax_Id=537209 SubName: Full=Transmembrane...    58   4e-07
tr|D5YWP1|D5YWP1_MYCTU Tax_Id=515616 SubName: Full=Transmembrane...    58   4e-07
tr|D5YJQ7|D5YJQ7_MYCTU Tax_Id=520140 SubName: Full=Transmembrane...    58   4e-07
tr|D5Y8M2|D5Y8M2_MYCTU Tax_Id=520141 SubName: Full=Putative unch...    58   4e-07
tr|D5XYW0|D5XYW0_MYCTU Tax_Id=515617 SubName: Full=Transmembrane...    58   4e-07
tr|A4KLI5|A4KLI5_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...    58   4e-07
tr|A2VP85|A2VP85_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    58   4e-07
tr|Q73UF9|Q73UF9_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...    57   6e-07
tr|A0QKG4|A0QKG4_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...    57   6e-07
tr|D5PCX5|D5PCX5_9MYCO Tax_Id=525368 SubName: Full=Putative unch...    56   2e-06
tr|Q0RZ42|Q0RZ42_RHOSR Tax_Id=101510 SubName: Full=Putative unch...    50   9e-05
tr|D0L6X1|D0L6X1_GORB4 Tax_Id=526226 SubName: Full=Putative unch...    44   0.005
tr|C7NUK2|C7NUK2_HALUD Tax_Id=519442 SubName: Full=Transport sys...    35   2.9  
tr|C7QZU5|C7QZU5_JONDD Tax_Id=471856 SubName: Full=Glycosyltrans...    35   3.8  
tr|Q2JHH8|Q2JHH8_SYNJB Tax_Id=321332 SubName: Full=K+ transporte...    34   5.0  
tr|D2Q2N8|D2Q2N8_KRIFD Tax_Id=479435 SubName: Full=Major facilit...    34   6.6  
tr|C1A7I2|C1A7I2_GEMAT Tax_Id=379066 RecName: Full=Sensor protei...    33   8.6  
tr|B1VIU5|B1VIU5_CORU7 Tax_Id=504474 SubName: Full=Putative drug...    33   8.6  
tr|D3A6V4|D3A6V4_NEISU Tax_Id=546268 SubName: Full=RHS family pr...    33   8.6  

>tr|A0QQ24|A0QQ24_MYCS2 Tax_Id=246196 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium smegmatis]
          Length = 102

 Score =  183 bits (464), Expect = 7e-45
 Identities = 90/102 (88%), Positives = 90/102 (88%)

Query: 1   MIMTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVMDRTLLPAILVPTIMFVGGVG 60
           MIMTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVMDRTLLPAILVPTIMFVGGVG
Sbjct: 1   MIMTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVMDRTLLPAILVPTIMFVGGVG 60

Query: 61  AFIRTYQVWRAEGTWPIWHGAGWXXXXXXXXXXXXPGAALTS 102
           AFIRTYQVWRAEGTWPIWHGAGW            PGAALTS
Sbjct: 61  AFIRTYQVWRAEGTWPIWHGAGWFLLALSLFCLAFPGAALTS 102


>tr|Q1BF51|Q1BF51_MYCSS Tax_Id=164756 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 102

 Score =  130 bits (328), Expect = 4e-29
 Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 2/101 (1%)

Query: 3   MTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVM--DRTLLPAILVPTIMFVGGVG 60
           MTNDVEKRW DP  F SAV YV++V+A+AGV   FY +  D +L+ AILVP ++F GGVG
Sbjct: 1   MTNDVEKRWHDPQAFHSAVTYVVAVIAVAGVCFAFYAIPDDHSLIAAILVPVVLFAGGVG 60

Query: 61  AFIRTYQVWRAEGTWPIWHGAGWXXXXXXXXXXXXPGAALT 101
           AFI+TY+VW+  GTWPIWHGAGW            PG+ALT
Sbjct: 61  AFIQTYRVWKFRGTWPIWHGAGWFLFMLFLLCLSVPGSALT 101


>tr|A3PTD7|A3PTD7_MYCSJ Tax_Id=164757 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 102

 Score =  130 bits (328), Expect = 4e-29
 Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 2/101 (1%)

Query: 3   MTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVM--DRTLLPAILVPTIMFVGGVG 60
           MTNDVEKRW DP  F SAV YV++V+A+AGV   FY +  D +L+ AILVP ++F GGVG
Sbjct: 1   MTNDVEKRWHDPQAFHSAVTYVVAVIAVAGVCFAFYAIPDDHSLIAAILVPVVLFAGGVG 60

Query: 61  AFIRTYQVWRAEGTWPIWHGAGWXXXXXXXXXXXXPGAALT 101
           AFI+TY+VW+  GTWPIWHGAGW            PG+ALT
Sbjct: 61  AFIQTYRVWKFRGTWPIWHGAGWFLFMLFLLCLSVPGSALT 101


>tr|A1U9T1|A1U9T1_MYCSK Tax_Id=189918 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 102

 Score =  130 bits (328), Expect = 4e-29
 Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 2/101 (1%)

Query: 3   MTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVM--DRTLLPAILVPTIMFVGGVG 60
           MTNDVEKRW DP  F SAV YV++V+A+AGV   FY +  D +L+ AILVP ++F GGVG
Sbjct: 1   MTNDVEKRWHDPQAFHSAVTYVVAVIAVAGVCFAFYAIPDDHSLIAAILVPVVLFAGGVG 60

Query: 61  AFIRTYQVWRAEGTWPIWHGAGWXXXXXXXXXXXXPGAALT 101
           AFI+TY+VW+  GTWPIWHGAGW            PG+ALT
Sbjct: 61  AFIQTYRVWKFRGTWPIWHGAGWFLFMLFLLCLSVPGSALT 101


>tr|A4T0T4|A4T0T4_MYCGI Tax_Id=350054 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium gilvum]
          Length = 106

 Score = 86.7 bits (213), Expect = 9e-16
 Identities = 46/102 (45%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 3   MTND---VEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVMDR--TLLPAILVPTIMFVG 57
           MTND   VEKR+  P  +RSAV Y L VVA+A  A + Y      ++  A LVP  +F G
Sbjct: 1   MTNDRDFVEKRFNRPGEYRSAVVYSLIVVALAAAAFVVYAFGPRDSVFSAALVPAFLFAG 60

Query: 58  GVGAFIRTYQVWRAEGTWPIWHGAGWXXXXXXXXXXXXPGAA 99
           GVGA IRTY+ W+A   W  W GAGW            PG+A
Sbjct: 61  GVGALIRTYREWKAGSGWTAWQGAGWFLLLLMLLTLAVPGSA 102


>tr|D5PXS4|D5PXS4_COREQ Tax_Id=525370 SubName: Full=Putative
          uncharacterized protein;[Rhodococcus equi ATCC 33707]
          Length = 118

 Score = 83.2 bits (204), Expect = 9e-15
 Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 18/99 (18%)

Query: 3  MTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVM-----------------DRTLL 45
          MT DVEKRW DP TFR A  Y  + + +A +A++  ++                 D   +
Sbjct: 1  MTRDVEKRWSDPQTFRRAALYDGATIVLALIAMVVTIVVGSGAGDCAPDEGRLCTDTARI 60

Query: 46 PAILVPT-IMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
            ++VP+ ++ +GG+GAF++ Y+VWR  GTWPIW  AGW
Sbjct: 61 VVVVVPSALLLLGGIGAFVQAYRVWRRAGTWPIWQAAGW 99


>tr|A1T250|A1T250_MYCVP Tax_Id=350058 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium vanbaalenii]
          Length = 106

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 3   MTND---VEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVM-DRT-LLPAILVPTIMFVG 57
           M+ND   VEKR+  P  +R+AV Y   VV +A +A   Y   DR+ +  A LVP  +F G
Sbjct: 1   MSNDRDFVEKRFSRPGEYRAAVIYTFVVVVLAAIAFAVYAFGDRSSVFSAALVPVFLFAG 60

Query: 58  GVGAFIRTYQVWRAEGTWPIWHGAGWXXXXXXXXXXXXPGAALTS 102
           GVGA +RTY+ W+  G W  W GAGW            PG A  S
Sbjct: 61  GVGALLRTYRQWKGGGGWTAWQGAGWFLLLLMLLTLAVPGGAAFS 105


>tr|Q5YX06|Q5YX06_NOCFA Tax_Id=37329 SubName: Full=Putative
          uncharacterized protein;[Nocardia farcinica]
          Length = 117

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 3  MTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFY---------------VMDRTLLPA 47
          M +DVEKRW DP  FR AV + L VVA+A +  +                 + D     A
Sbjct: 1  MVDDVEKRWSDPEGFRKAVRFGLGVVALAALVAVIIGIWAASRDACETGPMLCDTASRVA 60

Query: 48 ILV--PTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
          ++V    ++  G +GAF+ TY  WR    WPIW G GW
Sbjct: 61 MVVGPAVVLAAGWIGAFVITYLRWRQGRVWPIWQGTGW 98


>tr|Q0S5D3|Q0S5D3_RHOSR Tax_Id=101510 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus sp.]
          Length = 133

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 12/94 (12%)

Query: 2   IMTNDVEKRWRDPATFRSAV---AYVLSVVAIAGVALIFYVMDRTLLPA------ILV-- 50
           +MT+  +  +R  AT+ +AV   A V++++++A +++       +++        +LV  
Sbjct: 20  MMTSGADLTFRRAATYTAAVMGGAIVVALLSVAWMSIGSGDCAESMMECAGGEKYVLVFG 79

Query: 51  -PTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
            P ++ +GGVGAF++TY+VWRA G WPIW GAGW
Sbjct: 80  PPALLLLGGVGAFVQTYRVWRAGGRWPIWQGAGW 113


>tr|B1MBI1|B1MBI1_MYCA9 Tax_Id=561007 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium abscessus]
          Length = 121

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 18/99 (18%)

Query: 3   MTNDVEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVM-----------DRTLLP----- 46
           M +D E++ RD  T   AV +  + VA+A V  +  ++           D+TL       
Sbjct: 5   MYSDAERKDRDKRTHIHAVRFSAATVALAVVTFVTAIVWMGQCSVSVEVDKTLCGRHGTP 64

Query: 47  --AILVPTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
             A+  P ++ +GG+ AF++TY+VWR  G W +W GAGW
Sbjct: 65  AMAMAAPGVLMIGGIIAFVQTYRVWRRRGRWWVWQGAGW 103


>tr|B2HDY6|B2HDY6_MYCMM Tax_Id=216594 SubName: Full=Conserved
           hypothetical membrane protein;[Mycobacterium marinum]
          Length = 128

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 1/43 (2%)

Query: 41  DRTLLPAILVPTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +RTLL A+  P I+F  G+ AF+RTY+VWR  GTW  WHGAGW
Sbjct: 63  ERTLL-ALGAPAILFASGIWAFVRTYRVWRDGGTWWGWHGAGW 104


>tr|A0PRK3|A0PRK3_MYCUA Tax_Id=362242 SubName: Full=Conserved
           hypothetical membrane protein;[Mycobacterium ulcerans]
          Length = 128

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 1/43 (2%)

Query: 41  DRTLLPAILVPTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +RTLL A+  P I+F  G+ AF+RTY+VWR  GTW  WHGAGW
Sbjct: 63  ERTLL-ALGAPAILFASGIWAFVRTYRVWRDGGTWWGWHGAGW 104


>tr|Q7TWT3|Q7TWT3_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE
           TRANSMEMBRANE PROTEIN;[Mycobacterium bovis]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|P96894|P96894_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE
           TRANSMEMBRANE PROTEIN; SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|C6DL26|C6DL26_MYCTK Tax_Id=478434 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|C1AH63|C1AH63_MYCBT Tax_Id=561275 SubName: Full=Putative
           transmembrane protein;[Mycobacterium bovis]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|A5WSK4|A5WSK4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transmembrane protein;[Mycobacterium tuberculosis]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|A5U7W3|A5U7W3_MYCTA Tax_Id=419947 SubName: Full=Putative
           transmembrane protein;[Mycobacterium tuberculosis]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|A1KNU1|A1KNU1_MYCBP Tax_Id=410289 SubName: Full=Possible
           transmembrane protein;[Mycobacterium bovis]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D6G379|D6G379_MYCTU Tax_Id=478435 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis KZN 605]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D6FRJ1|D6FRJ1_MYCTU Tax_Id=611304 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis K85]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D6FLJ6|D6FLJ6_MYCTU Tax_Id=611303 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis CPHL_A]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D6F9T9|D6F9T9_MYCTU Tax_Id=611302 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis T46]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D5ZLG8|D5ZLG8_MYCTU Tax_Id=537210 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis T17]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D5Z8D4|D5Z8D4_MYCTU Tax_Id=537209 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis GM 1503]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D5YWP1|D5YWP1_MYCTU Tax_Id=515616 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis 02_1987]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D5YJQ7|D5YJQ7_MYCTU Tax_Id=520140 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis EAS054]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D5Y8M2|D5Y8M2_MYCTU Tax_Id=520141 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T85]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|D5XYW0|D5XYW0_MYCTU Tax_Id=515617 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis T92]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|A4KLI5|A4KLI5_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transmembrane protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|A2VP85|A2VP85_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 125

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 21/90 (23%)

Query: 12  RDPATFRSAVAYVLSVVAIAGVALIFYVMDRTL------------------LPAILVPTI 53
           RD +   SA+ + + V A+ GV   F +M   L                  L A+  P I
Sbjct: 15  RDDSEVHSAIRFAV-VAAVVGVG--FLIMGALLVSTCSGVDTAACGPPQRILLALGGPLI 71

Query: 54  MFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           +   G+ AF+RTY+VWRAEGTW  WHGAGW
Sbjct: 72  LCAAGLWAFLRTYRVWRAEGTWWGWHGAGW 101


>tr|Q73UF9|Q73UF9_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 127

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)

Query: 42  RTLLPAILVPTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           RTLL A   P I   GG+ AF+RTY+VW+A GTW  WHGAGW
Sbjct: 63  RTLL-AFGGPLIALAGGIWAFVRTYRVWKARGTWWGWHGAGW 103


>tr|A0QKG4|A0QKG4_MYCA1 Tax_Id=243243 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium avium]
          Length = 108

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)

Query: 42 RTLLPAILVPTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
          RTLL A   P I   GG+ AF+RTY+VW+A GTW  WHGAGW
Sbjct: 44 RTLL-AFGGPLIALAGGIWAFVRTYRVWKARGTWWGWHGAGW 84


>tr|D5PCX5|D5PCX5_9MYCO Tax_Id=525368 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 127

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)

Query: 42  RTLLPAILVPTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
           RTLL A+  P I+   G+ AF+RTY+VW+AEG W  WHGAGW
Sbjct: 63  RTLL-ALGGPLILLAAGLWAFLRTYRVWKAEGAWWGWHGAGW 103


>tr|Q0RZ42|Q0RZ42_RHOSR Tax_Id=101510 SubName: Full=Putative
          uncharacterized protein;[Rhodococcus sp.]
          Length = 114

 Score = 50.1 bits (118), Expect = 9e-05
 Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 20/97 (20%)

Query: 7  VEKRWRDPATFRSAVAYVLSVVAIAGVALIFYVM------------DRTLL---PAILV- 50
          +EKRW D + FRSA  Y   V+A+A  A+   V               TLL   PA +V 
Sbjct: 1  MEKRWSDRSAFRSAAIYAGVVIAVALAAMGLTVGWAATGRRECADDGHTLLCSGPARMVL 60

Query: 51 ----PTIMFVGGVGAFIRTYQVWRAEGTWPIWHGAGW 83
                I+ +GG+GAF+  Y+VWR         GAGW
Sbjct: 61 AFVATAILLLGGLGAFVVAYRVWRRVAAGQSGRGAGW 97


>tr|D0L6X1|D0L6X1_GORB4 Tax_Id=526226 SubName: Full=Putative
          uncharacterized protein;[Gordonia bronchialis]
          Length = 96

 Score = 44.3 bits (103), Expect = 0.005
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 18 RSAVAYVLSVVAIA-GVALIFYVMDRTLLPAILV--PTIMFVGGVGAFIRTYQVWRAEGT 74
          R+ + +V+  V  A G+A +       L   + V  P +  +G +    RTY+VWR  G 
Sbjct: 9  RAVIVHVIVTVGFALGLAAVGAASSTPLSTVLFVASPIVALLGALAMLWRTYRVWRRAGR 68

Query: 75 WPIWHGAGW 83
          W +W G  W
Sbjct: 69 WQLWQGGSW 77


>tr|C7NUK2|C7NUK2_HALUD Tax_Id=519442 SubName: Full=Transport system
           permease protein;[Halorhabdus utahensis]
          Length = 398

 Score = 35.0 bits (79), Expect = 2.9
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 24  VLSVVAIAGVALIF-YVMDRTLLP-AILVPTIMFVGGVGAFIRTYQVWRAEGTWPI 77
           +L +VA++G  L+  YV+    L  + L+P I  +GG+GAF+  Y +    GT P+
Sbjct: 149 LLVLVALSGATLVIPYVVGSVALDISSLLPIIAALGGIGAFLLVYAIAWKNGTSPV 204


>tr|C7QZU5|C7QZU5_JONDD Tax_Id=471856 SubName:
           Full=Glycosyltransferase-like protein; Flags:
           Precursor;[Jonesia denitrificans]
          Length = 1192

 Score = 34.7 bits (78), Expect = 3.8
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 26  SVVAIAGVALIFYVMDRTLLPAILVPTIMFVGGVGAFIRTYQVW 69
           S+ A+ G AL+F V+     P +L+P ++ VG    F RT  +W
Sbjct: 651 SLAALGGAALVFAVLTAAA-PVLLLPGVVLVGTAAVFTRTRALW 693


>tr|Q2JHH8|Q2JHH8_SYNJB Tax_Id=321332 SubName: Full=K+ transporter,
           Trk family;[Synechococcus sp.]
          Length = 490

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 17/61 (27%), Positives = 34/61 (55%)

Query: 13  DPATFRSAVAYVLSVVAIAGVALIFYVMDRTLLPAILVPTIMFVGGVGAFIRTYQVWRAE 72
           DP ++  A+   +S +++ G++ I    D TLL  I++  ++ +GGVG  +    V++  
Sbjct: 88  DPLSWNEALFTAMSALSVTGLSTIVAAEDLTLLGQIVLLILIQIGGVGFMVLAVVVFQLI 147

Query: 73  G 73
           G
Sbjct: 148 G 148


>tr|D2Q2N8|D2Q2N8_KRIFD Tax_Id=479435 SubName: Full=Major
           facilitator superfamily MFS_1; Flags:
           Precursor;[Kribbella flavida]
          Length = 395

 Score = 33.9 bits (76), Expect = 6.6
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 11  WRDPATFRSAVAYVLSVVAIAGVALIFYVMDRTLLPAILVPTIMFVGGVGAFI 63
           W   AT  S  AY++S   ++ +     + D T LPA+ VP ++ + G+GAF+
Sbjct: 210 WVYAATLLSTAAYMISFNFLSAL-----LTDVTHLPAVWVPAVLALFGIGAFV 257


>tr|C1A7I2|C1A7I2_GEMAT Tax_Id=379066 RecName: Full=Sensor protein;
           EC=2.7.13.3;[Gemmatimonas aurantiaca]
          Length = 1389

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 16  TFRSAVAYVLSVVAIAGVALIFYVMD--RTLLPAILVPTIMFVGGVGAFIRTYQVWRAEG 73
           +++ A+A V + + +AG +    V+   R L P + +      GG+   +     W A G
Sbjct: 424 SWQLALALVGAAILLAGASAGRAVLGGRRGLPPVVTLLIAAIAGGLAPAL-----WEAPG 478

Query: 74  TWPIWHGAGW 83
           TWP W+ A W
Sbjct: 479 TWPAWYPALW 488


>tr|B1VIU5|B1VIU5_CORU7 Tax_Id=504474 SubName: Full=Putative drug
           exporter of the RND superfamily;[Corynebacterium
           urealyticum]
          Length = 801

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 19/67 (28%), Positives = 32/67 (47%)

Query: 16  TFRSAVAYVLSVVAIAGVALIFYVMDRTLLPAILVPTIMFVGGVGAFIRTYQVWRAEGTW 75
           T + A A  + +  + G+ALI  +M    +   L+  + F+  VGA      ++  EG W
Sbjct: 579 TDKLADAMPIYLGLVVGLALILLLMVFRSIVVTLIAALGFLLSVGAAFGVTVLFWQEGLW 638

Query: 76  PIWHGAG 82
            +WH  G
Sbjct: 639 GLWHSPG 645


>tr|D3A6V4|D3A6V4_NEISU Tax_Id=546268 SubName: Full=RHS family
           protein;[Neisseria subflava NJ9703]
          Length = 243

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 9   KRWRDPATFRSAVAYVLSVVAIAGVALIFYVMDRTLLPAILVP 51
           K+W++PA  RS V     VVA AG A I Y + R  LP++L P
Sbjct: 190 KQWKNPAVPRSTVETGAKVVAGAGAAYIVYRIVR-FLPSLLPP 231


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.328    0.139    0.467 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 718,791,544
Number of extensions: 23626914
Number of successful extensions: 93395
Number of sequences better than 10.0: 43
Number of HSP's gapped: 94019
Number of HSP's successfully gapped: 43
Length of query: 102
Length of database: 4,236,830,644
Length adjustment: 71
Effective length of query: 31
Effective length of database: 3,348,772,300
Effective search space: 103811941300
Effective search space used: 103811941300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 75 (33.5 bits)