BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_0904
         (89 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QQW9|A0QQW9_MYCS2 Tax_Id=246196 SubName: Full=Probable cons...   134   4e-30
tr|Q1BED1|Q1BED1_MYCSS Tax_Id=164756 SubName: Full=Putative memb...    94   7e-18
tr|A3PU59|A3PU59_MYCSJ Tax_Id=164757 SubName: Full=Putative unch...    94   7e-18
tr|A1UAK3|A1UAK3_MYCSK Tax_Id=189918 SubName: Full=Putative unch...    94   7e-18
tr|A1T383|A1T383_MYCVP Tax_Id=350058 SubName: Full=Putative unch...    74   6e-12
tr|A4T2Z5|A4T2Z5_MYCGI Tax_Id=350054 SubName: Full=Putative unch...    57   7e-07
tr|Q7U1Y0|Q7U1Y0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSER...    49   2e-04
tr|O53748|O53748_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSER...    49   2e-04
tr|C6DT44|C6DT44_MYCTK Tax_Id=478434 SubName: Full=Conserved mem...    49   2e-04
tr|C1AKE0|C1AKE0_MYCBT Tax_Id=561275 SubName: Full=Putative unch...    49   2e-04
tr|A5WJH4|A5WJH4_MYCTF Tax_Id=336982 SubName: Full=Conserved mem...    49   2e-04
tr|A5TZJ0|A5TZJ0_MYCTA Tax_Id=419947 SubName: Full=Putative cons...    49   2e-04
tr|A1KFT6|A1KFT6_MYCBP Tax_Id=410289 SubName: Full=Probable cons...    49   2e-04
tr|D6G9T0|D6G9T0_MYCTU Tax_Id=478435 SubName: Full=Conserved mem...    49   2e-04
tr|D6FY70|D6FY70_MYCTU Tax_Id=611304 SubName: Full=Conserved mem...    49   2e-04
tr|D6FDV6|D6FDV6_MYCTU Tax_Id=611303 SubName: Full=Conserved mem...    49   2e-04
tr|D6F162|D6F162_MYCTU Tax_Id=611302 SubName: Full=Conserved mem...    49   2e-04
tr|D5ZCI3|D5ZCI3_MYCTU Tax_Id=537210 SubName: Full=Conserved mem...    49   2e-04
tr|D5Z037|D5Z037_MYCTU Tax_Id=537209 SubName: Full=Putative unch...    49   2e-04
tr|D5YN94|D5YN94_MYCTU Tax_Id=515616 SubName: Full=Putative unch...    49   2e-04
tr|D5YCE3|D5YCE3_MYCTU Tax_Id=520140 SubName: Full=Putative unch...    49   2e-04
tr|D5XQ76|D5XQ76_MYCTU Tax_Id=515617 SubName: Full=Conserved mem...    49   2e-04
tr|A4KEF1|A4KEF1_MYCTU Tax_Id=395095 SubName: Full=Conserved mem...    49   2e-04
tr|A2VFE8|A2VFE8_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    49   2e-04
tr|D5PBM8|D5PBM8_9MYCO Tax_Id=525368 SubName: Full=Putative unch...    48   3e-04
tr|Q50067|Q50067_MYCLE Tax_Id=1769 SubName: Full=Possible membra...    46   0.001
tr|B8ZT49|B8ZT49_MYCLB Tax_Id=561304 SubName: Full=Possible memb...    46   0.001
tr|B2HQS6|B2HQS6_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp...    45   0.004
tr|A0PQJ1|A0PQJ1_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp...    45   0.004
tr|Q73SW6|Q73SW6_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...    44   0.006
tr|A0QLM6|A0QLM6_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...    44   0.006

>tr|A0QQW9|A0QQW9_MYCS2 Tax_Id=246196 SubName: Full=Probable
          conserved membrane protein;[Mycobacterium smegmatis]
          Length = 89

 Score =  134 bits (337), Expect = 4e-30
 Identities = 69/89 (77%), Positives = 69/89 (77%)

Query: 1  MRNEIVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQ 60
          MRNEIVSGIAGLVAGHILWLAAITLATDSSRVTRW                    RRYQQ
Sbjct: 1  MRNEIVSGIAGLVAGHILWLAAITLATDSSRVTRWVLVVAALSFVGGAAAAWVGWRRYQQ 60

Query: 61 RSRVWAAFLWCLPVSPVLFSLTLLGVTYL 89
          RSRVWAAFLWCLPVSPVLFSLTLLGVTYL
Sbjct: 61 RSRVWAAFLWCLPVSPVLFSLTLLGVTYL 89


>tr|Q1BED1|Q1BED1_MYCSS Tax_Id=164756 SubName: Full=Putative
          membrane protein;[Mycobacterium sp.]
          Length = 89

 Score = 93.6 bits (231), Expect = 7e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%)

Query: 1  MRNEIVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQ 60
          MRNEIV+G+ G V GHILWL AITLAT++S V+ W                    RR+Q+
Sbjct: 1  MRNEIVAGVGGFVIGHILWLIAITLATNTSDVSTWVLVVAALSFVVGAALGYLGWRRFQR 60

Query: 61 RSRVWAAFLWCLPVSPVLFSLTLLGVTYL 89
          +  VW++F+W L VSPVLFS+ +LGVTYL
Sbjct: 61 KEHVWSSFVWGLAVSPVLFSIVVLGVTYL 89


>tr|A3PU59|A3PU59_MYCSJ Tax_Id=164757 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium sp.]
          Length = 89

 Score = 93.6 bits (231), Expect = 7e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%)

Query: 1  MRNEIVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQ 60
          MRNEIV+G+ G V GHILWL AITLAT++S V+ W                    RR+Q+
Sbjct: 1  MRNEIVAGVGGFVIGHILWLIAITLATNTSDVSTWVLVVAALSFVVGAALGYLGWRRFQR 60

Query: 61 RSRVWAAFLWCLPVSPVLFSLTLLGVTYL 89
          +  VW++F+W L VSPVLFS+ +LGVTYL
Sbjct: 61 KEHVWSSFVWGLAVSPVLFSIVVLGVTYL 89


>tr|A1UAK3|A1UAK3_MYCSK Tax_Id=189918 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium sp.]
          Length = 89

 Score = 93.6 bits (231), Expect = 7e-18
 Identities = 45/89 (50%), Positives = 58/89 (65%)

Query: 1  MRNEIVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQ 60
          MRNEIV+G+ G V GHILWL AITLAT++S V+ W                    RR+Q+
Sbjct: 1  MRNEIVAGVGGFVIGHILWLIAITLATNTSDVSTWVLVVAALSFVVGAALGYLGWRRFQR 60

Query: 61 RSRVWAAFLWCLPVSPVLFSLTLLGVTYL 89
          +  VW++F+W L VSPVLFS+ +LGVTYL
Sbjct: 61 KEHVWSSFVWGLAVSPVLFSIVVLGVTYL 89


>tr|A1T383|A1T383_MYCVP Tax_Id=350058 SubName: Full=Putative
          uncharacterized protein; Flags:
          Precursor;[Mycobacterium vanbaalenii]
          Length = 92

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 1  MRNEIVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQ 60
          MR   V+GI GLV GHILWLA I+ A  S+ V  W                    R+ Q+
Sbjct: 1  MRAIWVAGIGGLVVGHILWLAGISAAIASANVPTWVLVVAGVSLILGLASALLGRRKLQR 60

Query: 61 RSR---VWAAFLWCLPVSPVLFSLTLLGVTYL 89
          + R   +WAAFL+ L +SPVLFSL +LGVTYL
Sbjct: 61 KDRKSEIWAAFLFGLSISPVLFSLAVLGVTYL 92


>tr|A4T2Z5|A4T2Z5_MYCGI Tax_Id=350054 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium gilvum]
          Length = 80

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 13 VAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQ---QRSRVWAAFL 69
          + GH+LWLA I+ A  S+ ++ W                    R +Q   ++S   AAFL
Sbjct: 1  MVGHVLWLAGISFAISSTDISTWVLVVAAVSFVVGVSAALLGRRLWQRKDEKSEARAAFL 60

Query: 70 WCLPVSPVLFSLTLLGVTYL 89
          W L +SPVL SL +LGVTYL
Sbjct: 61 WGLSISPVLLSLIVLGVTYL 80


>tr|Q7U1Y0|Q7U1Y0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE
          CONSERVED MEMBRANE PROTEIN;[Mycobacterium bovis]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|O53748|O53748_MYCTU Tax_Id=1773 SubName: Full=PROBABLE
          CONSERVED MEMBRANE PROTEIN; SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|C6DT44|C6DT44_MYCTK Tax_Id=478434 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|C1AKE0|C1AKE0_MYCBT Tax_Id=561275 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium bovis]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|A5WJH4|A5WJH4_MYCTF Tax_Id=336982 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|A5TZJ0|A5TZJ0_MYCTA Tax_Id=419947 SubName: Full=Putative
          conserved membrane protein;[Mycobacterium tuberculosis]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|A1KFT6|A1KFT6_MYCBP Tax_Id=410289 SubName: Full=Probable
          conserved membrane protein;[Mycobacterium bovis]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D6G9T0|D6G9T0_MYCTU Tax_Id=478435 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis KZN 605]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D6FY70|D6FY70_MYCTU Tax_Id=611304 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis K85]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D6FDV6|D6FDV6_MYCTU Tax_Id=611303 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis CPHL_A]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D6F162|D6F162_MYCTU Tax_Id=611302 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis T46]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D5ZCI3|D5ZCI3_MYCTU Tax_Id=537210 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis T17]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D5Z037|D5Z037_MYCTU Tax_Id=537209 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis GM
          1503]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D5YN94|D5YN94_MYCTU Tax_Id=515616 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis
          02_1987]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D5YCE3|D5YCE3_MYCTU Tax_Id=520140 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis
          EAS054]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D5XQ76|D5XQ76_MYCTU Tax_Id=515617 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis T92]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|A4KEF1|A4KEF1_MYCTU Tax_Id=395095 SubName: Full=Conserved
          membrane protein;[Mycobacterium tuberculosis str.
          Haarlem]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|A2VFE8|A2VFE8_MYCTU Tax_Id=348776 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 97

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I+  I G+V G+ILWLAAI++    + V++W                    R   +    
Sbjct: 13 IMGAIGGVVTGYILWLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLA 72

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
          W+AF + LP+ PV+ ++ +L   YL
Sbjct: 73 WSAFAFSLPIPPVVLTVAVLADIYL 97


>tr|D5PBM8|D5PBM8_9MYCO Tax_Id=525368 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium parascrofulaceum
          ATCC BAA-614]
          Length = 90

 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 1  MRNEIVSG-IAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQ 59
          MR+++V G + GL AG++LWLAA ++  D++ V +W                       +
Sbjct: 1  MRSDVVLGAVGGLAAGYVLWLAAFSIVDDNAAVGQWAPTVLLLSLALAVCATTWASLLRR 60

Query: 60 QRSRVWAAFLWCLPVSPVLFSLTLLGVTYL 89
          +R   W+ F + L + P+L +L +    YL
Sbjct: 61 RRKYAWSGFGFALSLPPLLLTLAVFANVYL 90


>tr|Q50067|Q50067_MYCLE Tax_Id=1769 SubName: Full=Possible membrane
           protein; SubName: Full=U1740k;[Mycobacterium leprae]
          Length = 101

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 6   VSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRVW 65
           V  I G+  G++LWL  +++  + + V++W                       Q+R   W
Sbjct: 18  VGAIGGVATGYVLWLVVMSIGYNITTVSQWSLIVLILSMVSVFCSGMCGWWLRQRRKHAW 77

Query: 66  AAFLWCLPVSPVLFSLTLLGVTYL 89
            AF + LPV PV+ +L +L   YL
Sbjct: 78  GAFTFGLPVFPVVLTLAVLAKIYL 101


>tr|B8ZT49|B8ZT49_MYCLB Tax_Id=561304 SubName: Full=Possible
           membrane protein;[Mycobacterium leprae]
          Length = 101

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 6   VSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRVW 65
           V  I G+  G++LWL  +++  + + V++W                       Q+R   W
Sbjct: 18  VGAIGGVATGYVLWLVVMSIGYNITTVSQWSLIVLILSMVSVFCSGMCGWWLRQRRKHAW 77

Query: 66  AAFLWCLPVSPVLFSLTLLGVTYL 89
            AF + LPV PV+ +L +L   YL
Sbjct: 78  GAFTFGLPVFPVVLTLAVLAKIYL 101


>tr|B2HQS6|B2HQS6_MYCMM Tax_Id=216594 SubName: Full=Conserved
          hypothetical membrane protein;[Mycobacterium marinum]
          Length = 91

 Score = 44.7 bits (104), Expect = 0.004
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          ++ G  G+ AG++LWL AI++  D + V +W                        +    
Sbjct: 7  VLGGAGGVTAGYLLWLVAISIGDDLTTVGQWSLVILLLSGLLAVGAALVGLLMRWRNRYG 66

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTY 88
          W+AF++ LPV PV+ +L +L   Y
Sbjct: 67 WSAFVFGLPVLPVVLTLAVLADIY 90


>tr|A0PQJ1|A0PQJ1_MYCUA Tax_Id=362242 SubName: Full=Conserved
          hypothetical membrane protein;[Mycobacterium ulcerans]
          Length = 91

 Score = 44.7 bits (104), Expect = 0.004
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          ++ G  G+ AG++LWL AI++  D + V +W                        +    
Sbjct: 7  VLGGAGGVTAGYLLWLVAISIGDDLTTVGQWSLVILLLSGLLAVGAALVGLLMRWRNRYG 66

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTY 88
          W+AF++ LPV PV+ +L +L   Y
Sbjct: 67 WSAFVFGLPVLPVVLTLAVLADIY 90


>tr|Q73SW6|Q73SW6_MYCPA Tax_Id=1770 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium
          paratuberculosis]
          Length = 93

 Score = 43.9 bits (102), Expect = 0.006
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I + + GL  G++LWL AI+   D++ V +W                     + ++ SR 
Sbjct: 10 IAAALGGLATGYVLWLLAISNG-DNATVGQWGPLVLVASVVLGGAAAVWGAWQRRRGSRP 68

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
           AAF + LPV PVL +L +L   YL
Sbjct: 69 RAAFAFALPVLPVLLTLAILADVYL 93


>tr|A0QLM6|A0QLM6_MYCA1 Tax_Id=243243 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium avium]
          Length = 93

 Score = 43.9 bits (102), Expect = 0.006
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 5  IVSGIAGLVAGHILWLAAITLATDSSRVTRWXXXXXXXXXXXXXXXXXXXXRRYQQRSRV 64
          I + + GL  G++LWL AI+   D++ V +W                     + ++ SR 
Sbjct: 10 IAAALGGLATGYVLWLLAISNG-DNATVGQWGPLVLVASVVLGGAAAVWGAWQRRRGSRP 68

Query: 65 WAAFLWCLPVSPVLFSLTLLGVTYL 89
           AAF + LPV PVL +L +L   YL
Sbjct: 69 RAAFAFALPVLPVLLTLAILADVYL 93


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.329    0.137    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 542,623,214
Number of extensions: 10580245
Number of successful extensions: 34902
Number of sequences better than 10.0: 31
Number of HSP's gapped: 34881
Number of HSP's successfully gapped: 31
Length of query: 89
Length of database: 4,236,830,644
Length adjustment: 59
Effective length of query: 30
Effective length of database: 3,498,866,668
Effective search space: 104966000040
Effective search space used: 104966000040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 75 (33.5 bits)