BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_0918 (142 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QQY3|A0QQY3_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 269 7e-71 tr|Q1BEC1|Q1BEC1_MYCSS Tax_Id=164756 SubName: Full=Transcription... 216 9e-55 tr|A3PU69|A3PU69_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 216 9e-55 tr|A1UAL3|A1UAL3_MYCSK Tax_Id=189918 SubName: Full=Transcription... 216 9e-55 tr|A1T395|A1T395_MYCVP Tax_Id=350058 SubName: Full=Transcription... 213 6e-54 tr|A4T304|A4T304_MYCGI Tax_Id=350054 SubName: Full=Transcription... 211 3e-53 tr|Q73SV6|Q73SV6_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 193 7e-48 tr|A0QLL6|A0QLL6_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 193 7e-48 tr|Q6GVN9|Q6GVN9_MYCAV Tax_Id=1764 SubName: Full=Possible transc... 193 7e-48 tr|D5PBN9|D5PBN9_9MYCO Tax_Id=525368 SubName: Full=PbsX family t... 192 1e-47 tr|B1MID6|B1MID6_MYCA9 Tax_Id=561007 SubName: Full=Possible tran... 186 6e-46 sp|O53759|Y474_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized H... 184 4e-45 tr|Q7U1W9|Q7U1W9_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC... 184 4e-45 tr|C6DT56|C6DT56_MYCTK Tax_Id=478434 SubName: Full=Transcription... 184 4e-45 tr|C1AKF2|C1AKF2_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 184 4e-45 tr|A5WJI6|A5WJI6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 184 4e-45 tr|A5TZK2|A5TZK2_MYCTA Tax_Id=419947 SubName: Full=PbsX family t... 184 4e-45 tr|A1KFU8|A1KFU8_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 184 4e-45 tr|D6FYY5|D6FYY5_MYCTU Tax_Id=478435 SubName: Full=Transcription... 184 4e-45 tr|D6FY82|D6FY82_MYCTU Tax_Id=611304 SubName: Full=Transcription... 184 4e-45 tr|D6FDW8|D6FDW8_MYCTU Tax_Id=611303 SubName: Full=Transcription... 184 4e-45 tr|D6F174|D6F174_MYCTU Tax_Id=611302 SubName: Full=Transcription... 184 4e-45 tr|D5ZCJ5|D5ZCJ5_MYCTU Tax_Id=537210 SubName: Full=Transcription... 184 4e-45 tr|D5Z049|D5Z049_MYCTU Tax_Id=537209 SubName: Full=Putative unch... 184 4e-45 tr|D5YNA6|D5YNA6_MYCTU Tax_Id=515616 SubName: Full=Transcription... 184 4e-45 tr|D5Y0E1|D5Y0E1_MYCTU Tax_Id=520141 SubName: Full=Transcription... 184 4e-45 tr|D5XQ90|D5XQ90_MYCTU Tax_Id=515617 SubName: Full=Transcription... 184 4e-45 tr|A4KEG3|A4KEG3_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 184 4e-45 tr|A2VFG0|A2VFG0_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 184 4e-45 tr|D5YCF5|D5YCF5_MYCTU Tax_Id=520140 SubName: Full=Transcription... 183 7e-45 tr|B2HQT9|B2HQT9_MYCMM Tax_Id=216594 SubName: Full=Transcription... 179 1e-43 tr|A0PVX9|A0PVX9_MYCUA Tax_Id=362242 SubName: Full=Transcription... 178 2e-43 tr|D0L2W4|D0L2W4_GORB4 Tax_Id=526226 SubName: Full=Helix-turn-he... 169 1e-40 tr|D5PS47|D5PS47_COREQ Tax_Id=525370 SubName: Full=PbsX family t... 167 4e-40 tr|Q0SEX4|Q0SEX4_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 163 7e-39 tr|C1AZE3|C1AZE3_RHOOB Tax_Id=632772 SubName: Full=Putative Xre ... 163 7e-39 tr|Q5YP30|Q5YP30_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-b... 162 9e-39 tr|C0ZUQ1|C0ZUQ1_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre ... 162 1e-38 tr|C3JIK7|C3JIK7_RHOER Tax_Id=596309 SubName: Full=Transcription... 162 1e-38 tr|D5UY00|D5UY00_TSUPA Tax_Id=521096 SubName: Full=Transcription... 158 2e-37 tr|A4FQ27|A4FQ27_SACEN Tax_Id=405948 SubName: Full=Transcription... 151 2e-35 tr|C6WPM0|C6WPM0_ACTMD Tax_Id=446462 SubName: Full=Transcription... 144 5e-33 tr|D1A4M3|D1A4M3_THECD Tax_Id=471852 SubName: Full=Transcription... 143 6e-33 tr|D3DCB4|D3DCB4_9ACTO Tax_Id=102897 SubName: Full=Transcription... 143 6e-33 tr|D1VCC6|D1VCC6_9ACTO Tax_Id=298654 SubName: Full=Transcription... 143 8e-33 >tr|A0QQY3|A0QQY3_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, XRE family protein;[Mycobacterium smegmatis] Length = 142 Score = 269 bits (688), Expect = 7e-71 Identities = 142/142 (100%), Positives = 142/142 (100%) Query: 1 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD Sbjct: 1 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 Query: 61 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN 120 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN Sbjct: 61 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN 120 Query: 121 EAAGEPEGAAVIPSPDEEPATD 142 EAAGEPEGAAVIPSPDEEPATD Sbjct: 121 EAAGEPEGAAVIPSPDEEPATD 142 >tr|Q1BEC1|Q1BEC1_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 161 Score = 216 bits (549), Expect = 9e-55 Identities = 117/141 (82%), Positives = 124/141 (87%), Gaps = 8/141 (5%) Query: 1 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 M+QDENLAAVV+NAAQDIGSFIR+QREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD Sbjct: 1 MSQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 Query: 61 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN 120 VLNQIAKALRVSAEVLYVRAGILEPSE +VRDAI++D +ITERQKQVLLDIYTSF QQN Sbjct: 61 VLNQIAKALRVSAEVLYVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQN 120 Query: 121 EAAGEPEGAAVIPSPDEEPAT 141 E AG DEEP T Sbjct: 121 EVAGS--------EVDEEPTT 133 >tr|A3PU69|A3PU69_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 161 Score = 216 bits (549), Expect = 9e-55 Identities = 117/141 (82%), Positives = 124/141 (87%), Gaps = 8/141 (5%) Query: 1 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 M+QDENLAAVV+NAAQDIGSFIR+QREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD Sbjct: 1 MSQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 Query: 61 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN 120 VLNQIAKALRVSAEVLYVRAGILEPSE +VRDAI++D +ITERQKQVLLDIYTSF QQN Sbjct: 61 VLNQIAKALRVSAEVLYVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQN 120 Query: 121 EAAGEPEGAAVIPSPDEEPAT 141 E AG DEEP T Sbjct: 121 EVAGS--------EVDEEPTT 133 >tr|A1UAL3|A1UAL3_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 161 Score = 216 bits (549), Expect = 9e-55 Identities = 117/141 (82%), Positives = 124/141 (87%), Gaps = 8/141 (5%) Query: 1 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 M+QDENLAAVV+NAAQDIGSFIR+QREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD Sbjct: 1 MSQDENLAAVVTNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 Query: 61 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN 120 VLNQIAKALRVSAEVLYVRAGILEPSE +VRDAI++D +ITERQKQVLLDIYTSF QQN Sbjct: 61 VLNQIAKALRVSAEVLYVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQN 120 Query: 121 EAAGEPEGAAVIPSPDEEPAT 141 E AG DEEP T Sbjct: 121 EVAGS--------EVDEEPTT 133 >tr|A1T395|A1T395_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium vanbaalenii] Length = 176 Score = 213 bits (542), Expect = 6e-54 Identities = 121/149 (81%), Positives = 126/149 (84%), Gaps = 8/149 (5%) Query: 1 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 M QDENLAAV+S+AAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD Sbjct: 1 MPQDENLAAVMSSAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 Query: 61 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN 120 VLNQIAKALRVSAEVLYVRAGILEPSE +EVRDAIV D +I ERQKQVLLDIYTSF QQN Sbjct: 61 VLNQIAKALRVSAEVLYVRAGILEPSETNEVRDAIVTDTAINERQKQVLLDIYTSFCQQN 120 Query: 121 EA-------AGEPEGAAVIPSPDEEPATD 142 EA A E G V DEEP T+ Sbjct: 121 EAVLAEAVSATEARGDNV-TDVDEEPTTE 148 >tr|A4T304|A4T304_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium gilvum] Length = 182 Score = 211 bits (536), Expect = 3e-53 Identities = 115/149 (77%), Positives = 125/149 (83%), Gaps = 9/149 (6%) Query: 3 QDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVL 62 QDENLAAVVSNAAQDIGSFIR+QREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVL Sbjct: 6 QDENLAAVVSNAAQDIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVL 65 Query: 63 NQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEA 122 NQIAKALRVSAEVLY++AGILEP + +EVRDAI+ D++I ERQKQVLLDIYTSF QQNEA Sbjct: 66 NQIAKALRVSAEVLYIQAGILEPGDTNEVRDAIITDMAINERQKQVLLDIYTSFCQQNEA 125 Query: 123 AGEPEGAA---------VIPSPDEEPATD 142 A AA + DEEP T+ Sbjct: 126 ALAEAAAADEMAKASADSVSDADEEPTTE 154 >tr|Q73SV6|Q73SV6_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 138 Score = 193 bits (490), Expect = 7e-48 Identities = 104/129 (80%), Positives = 113/129 (87%), Gaps = 4/129 (3%) Query: 1 MAQDENLAAVVSNAAQD----IGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 MA +E L+A VSNAA D IGSFIR+QRE AQVSVRQLAEK+GVSNPYLSQ+ERGLRK Sbjct: 1 MAPEEKLSAKVSNAASDMASDIGSFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVLNQIAKALRVSAEVLYVRAGILEPS+ S+VRDAIV D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLNQIAKALRVSAEVLYVRAGILEPSDKSQVRDAIVTDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGE 125 QQNEA E Sbjct: 121 TQQNEATHE 129 >tr|A0QLL6|A0QLL6_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, XRE family protein;[Mycobacterium avium] Length = 138 Score = 193 bits (490), Expect = 7e-48 Identities = 104/129 (80%), Positives = 113/129 (87%), Gaps = 4/129 (3%) Query: 1 MAQDENLAAVVSNAAQD----IGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 MA +E L+A VSNAA D IGSFIR+QRE AQVSVRQLAEK+GVSNPYLSQ+ERGLRK Sbjct: 1 MAPEEKLSAKVSNAASDMASDIGSFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVLNQIAKALRVSAEVLYVRAGILEPS+ S+VRDAIV D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLNQIAKALRVSAEVLYVRAGILEPSDKSQVRDAIVTDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGE 125 QQNEA E Sbjct: 121 TQQNEATHE 129 >tr|Q6GVN9|Q6GVN9_MYCAV Tax_Id=1764 SubName: Full=Possible transcriptional regulator;[Mycobacterium avium] Length = 138 Score = 193 bits (490), Expect = 7e-48 Identities = 104/129 (80%), Positives = 113/129 (87%), Gaps = 4/129 (3%) Query: 1 MAQDENLAAVVSNAAQD----IGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 MA +E L+A VSNAA D IGSFIR+QRE AQVSVRQLAEK+GVSNPYLSQ+ERGLRK Sbjct: 1 MAPEEKLSAKVSNAASDMASDIGSFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVLNQIAKALRVSAEVLYVRAGILEPS+ S+VRDAIV D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLNQIAKALRVSAEVLYVRAGILEPSDKSQVRDAIVTDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGE 125 QQNEA E Sbjct: 121 TQQNEATHE 129 >tr|D5PBN9|D5PBN9_9MYCO Tax_Id=525368 SubName: Full=PbsX family transcriptional regulator;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 142 Score = 192 bits (487), Expect = 1e-47 Identities = 102/127 (80%), Positives = 113/127 (88%), Gaps = 4/127 (3%) Query: 1 MAQDENLAAVVSNAAQD----IGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 MA +E L+A VSNAA D IG FIR+QRE AQVSVRQLAEK+GVSNPYLSQ+ERGLRK Sbjct: 1 MAPEEKLSAKVSNAASDMASDIGGFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSA+VLNQIAKALRVSAEVLYVRAGILEPS+ S+VRDAI+ D +ITERQKQVLLD+YTSF Sbjct: 61 PSAEVLNQIAKALRVSAEVLYVRAGILEPSDKSQVRDAIITDTAITERQKQVLLDVYTSF 120 Query: 117 RQQNEAA 123 QQNEAA Sbjct: 121 TQQNEAA 127 >tr|B1MID6|B1MID6_MYCA9 Tax_Id=561007 SubName: Full=Possible transcriptional regulator;[Mycobacterium abscessus] Length = 139 Score = 186 bits (473), Expect = 6e-46 Identities = 105/141 (74%), Positives = 115/141 (81%), Gaps = 4/141 (2%) Query: 1 MAQDENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSAD 60 M Q+ +LA VSNAA DIG FIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLR+PSA+ Sbjct: 1 MPQESDLATAVSNAASDIGGFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRRPSAE 60 Query: 61 VLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN 120 VLNQIAKALRVSAEVLYVRAGIL+ S+ S VRDAI+ D ITERQKQVLLD+Y+SF QQN Sbjct: 61 VLNQIAKALRVSAEVLYVRAGILDRSDASPVRDAIIADTFITERQKQVLLDVYSSFVQQN 120 Query: 121 EAAGEPEGAAVIPSPDEEPAT 141 A + V S E PAT Sbjct: 121 AEA----QSDVAESDLELPAT 137 >sp|O53759|Y474_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv0474/MT0491;[Mycobacterium tuberculosis] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|Q7U1W9|Q7U1W9_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|C6DT56|C6DT56_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|C1AKF2|C1AKF2_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|A5WJI6|A5WJI6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|A5TZK2|A5TZK2_MYCTA Tax_Id=419947 SubName: Full=PbsX family transcriptional regulator;[Mycobacterium tuberculosis] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|A1KFU8|A1KFU8_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulatory protein;[Mycobacterium bovis] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D6FYY5|D6FYY5_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis KZN 605] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D6FY82|D6FY82_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis K85] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D6FDW8|D6FDW8_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis CPHL_A] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D6F174|D6F174_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T46] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D5ZCJ5|D5ZCJ5_MYCTU Tax_Id=537210 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T17] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D5Z049|D5Z049_MYCTU Tax_Id=537209 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis GM 1503] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D5YNA6|D5YNA6_MYCTU Tax_Id=515616 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis 02_1987] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D5Y0E1|D5Y0E1_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis T85] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D5XQ90|D5XQ90_MYCTU Tax_Id=515617 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T92] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|A4KEG3|A4KEG3_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|A2VFG0|A2VFG0_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 140 Score = 184 bits (466), Expect = 4e-45 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGEPEGAAVIPSPD 136 QNEA E + P+ D Sbjct: 121 THQNEATREECPSDPTPTDD 140 >tr|D5YCF5|D5YCF5_MYCTU Tax_Id=520140 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis EAS054] Length = 140 Score = 183 bits (464), Expect = 7e-45 Identities = 97/129 (75%), Positives = 110/129 (85%), Gaps = 4/129 (3%) Query: 1 MAQDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRK 56 M+ +E LAA VS + A DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRK Sbjct: 1 MSSEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRK 60 Query: 57 PSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSF 116 PSADVL+QIAKALRVSAEVLYVRAGILEPSE S+VRDAI+ D +ITERQKQ+LLDIY SF Sbjct: 61 PSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASF 120 Query: 117 RQQNEAAGE 125 QNEA E Sbjct: 121 THQNEATRE 129 >tr|B2HQT9|B2HQT9_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 138 Score = 179 bits (453), Expect = 1e-43 Identities = 96/128 (75%), Positives = 106/128 (82%), Gaps = 3/128 (2%) Query: 1 MAQDENLAA---VVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKP 57 M +E L A VS+ A DIGSFIR QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKP Sbjct: 1 MPGEEKLGAKVSAVSSKASDIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP 60 Query: 58 SADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFR 117 SADVL QIAKALRVSAEVLYVRAGILEPSE S+VRD I+ D +ITERQKQ+LLDIY SF Sbjct: 61 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT 120 Query: 118 QQNEAAGE 125 QQNEA E Sbjct: 121 QQNEAVRE 128 >tr|A0PVX9|A0PVX9_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 138 Score = 178 bits (452), Expect = 2e-43 Identities = 96/128 (75%), Positives = 106/128 (82%), Gaps = 3/128 (2%) Query: 1 MAQDENLAA---VVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKP 57 M +E L A VS+ A DIGSFIR QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKP Sbjct: 1 MPGEEKLGAKVSAVSSKASDIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP 60 Query: 58 SADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFR 117 SADVL QIAKALRVSAEVLYVRAGILEPSE S+VRD I+ D +ITERQKQ+LLDIY SF Sbjct: 61 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT 120 Query: 118 QQNEAAGE 125 QQNEA E Sbjct: 121 QQNEAVCE 128 >tr|D0L2W4|D0L2W4_GORB4 Tax_Id=526226 SubName: Full=Helix-turn-helix domain protein;[Gordonia bronchialis] Length = 141 Score = 169 bits (427), Expect = 1e-40 Identities = 90/120 (75%), Positives = 102/120 (85%) Query: 6 NLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQI 65 N V+NAAQDIG+FIR+QR AA+VS+RQLAE+AGVSNPYLSQIERGLRKPSADVL QI Sbjct: 21 NPVEAVANAAQDIGAFIRSQRVAAEVSLRQLAERAGVSNPYLSQIERGLRKPSADVLAQI 80 Query: 66 AKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGE 125 AK LRVSAEVLYVRAGILE S VRDA++ D SI ERQKQ+LL+IY SFR++N AA E Sbjct: 81 AKGLRVSAEVLYVRAGILEERPASPVRDALIADDSINERQKQMLLEIYDSFRKENAAADE 140 >tr|D5PS47|D5PS47_COREQ Tax_Id=525370 SubName: Full=PbsX family transcriptional regulator;[Rhodococcus equi ATCC 33707] Length = 155 Score = 167 bits (423), Expect = 4e-40 Identities = 93/131 (70%), Positives = 108/131 (82%), Gaps = 1/131 (0%) Query: 8 AAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAK 67 A VV+ AAQDIGSFIR+QREAAQVS+RQLA+ AGVSNPYLSQIERGLRKPSADVL QIAK Sbjct: 12 ARVVAGAAQDIGSFIRSQREAAQVSLRQLAQLAGVSNPYLSQIERGLRKPSADVLAQIAK 71 Query: 68 ALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGEPE 127 LRVS+EVLYV+AGILE S VRDA++ D +ITERQKQVLL+IY SFR++N+ + E Sbjct: 72 GLRVSSEVLYVQAGILEQRPHSPVRDALLADGAITERQKQVLLEIYESFRREND-PHQSE 130 Query: 128 GAAVIPSPDEE 138 A + DEE Sbjct: 131 SADQADASDEE 141 >tr|Q0SEX4|Q0SEX4_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator;[Rhodococcus sp.] Length = 168 Score = 163 bits (412), Expect = 7e-39 Identities = 89/135 (65%), Positives = 104/135 (77%) Query: 8 AAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAK 67 A VVSNAA DIG FIRAQREAAQVS+RQLA+ AGVSNPYLSQIERGLRKPSA+VL QIAK Sbjct: 16 ARVVSNAAHDIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSAEVLGQIAK 75 Query: 68 ALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGEPE 127 LRVS+EVLYV+AG LE +RDA++ D +ITERQKQVLL+IY SF ++NE+A E Sbjct: 76 GLRVSSEVLYVQAGYLEQRPHGPLRDALLADTAITERQKQVLLEIYESFCRENESAEAAE 135 Query: 128 GAAVIPSPDEEPATD 142 +E +D Sbjct: 136 SRTSELRTEEHQRSD 150 >tr|C1AZE3|C1AZE3_RHOOB Tax_Id=632772 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus opacus] Length = 168 Score = 163 bits (412), Expect = 7e-39 Identities = 89/135 (65%), Positives = 104/135 (77%) Query: 8 AAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAK 67 A VVSNAA DIG FIRAQREAAQVS+RQLA+ AGVSNPYLSQIERGLRKPSA+VL QIAK Sbjct: 16 ARVVSNAAHDIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSAEVLGQIAK 75 Query: 68 ALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGEPE 127 LRVS+EVLYV+AG LE +RDA++ D +ITERQKQVLL+IY SF ++NE+A E Sbjct: 76 GLRVSSEVLYVQAGYLEQRPHGPLRDALLADTAITERQKQVLLEIYESFCRENESAEAAE 135 Query: 128 GAAVIPSPDEEPATD 142 +E +D Sbjct: 136 SRTSELRTEEHQRSD 150 >tr|Q5YP30|Q5YP30_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-binding protein;[Nocardia farcinica] Length = 136 Score = 162 bits (411), Expect = 9e-39 Identities = 91/128 (71%), Positives = 100/128 (78%), Gaps = 3/128 (2%) Query: 11 VSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALR 70 V+NAA DIG FIRAQREAAQVS+RQLA AGVSNPYLSQIERGLR PSA+VL QIAKALR Sbjct: 10 VANAAHDIGGFIRAQREAAQVSLRQLAALAGVSNPYLSQIERGLRNPSAEVLAQIAKALR 69 Query: 71 VSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGEPEGAA 130 VS+EVLYVRAG LE VRDA++ D SITERQKQVLLDIY SFR++N GE E Sbjct: 70 VSSEVLYVRAGYLEQRPHGPVRDALLADTSITERQKQVLLDIYESFRREN---GENETTD 126 Query: 131 VIPSPDEE 138 P + E Sbjct: 127 TPPRQESE 134 >tr|C0ZUQ1|C0ZUQ1_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus erythropolis] Length = 168 Score = 162 bits (410), Expect = 1e-38 Identities = 90/134 (67%), Positives = 105/134 (78%), Gaps = 3/134 (2%) Query: 8 AAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAK 67 A VVS+AA DIG FIRAQREAAQVS+RQLA+ AGVSNPYLSQIERGLRKPSADVL QIAK Sbjct: 27 ARVVSSAAHDIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSADVLAQIAK 86 Query: 68 ALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEA---AG 124 LRVS+EVLYV+AG LE S +RDA++ + +I ERQKQVLL+IY SF ++NE+ A Sbjct: 87 GLRVSSEVLYVQAGYLEQRPHSPIRDAVLAETAINERQKQVLLEIYDSFCRENESSRPAA 146 Query: 125 EPEGAAVIPSPDEE 138 P+ A PD E Sbjct: 147 APDFAESAAIPDTE 160 >tr|C3JIK7|C3JIK7_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, XRE family;[Rhodococcus erythropolis SK121] Length = 168 Score = 162 bits (410), Expect = 1e-38 Identities = 90/134 (67%), Positives = 105/134 (78%), Gaps = 3/134 (2%) Query: 8 AAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAK 67 A VVS+AA DIG FIRAQREAAQVS+RQLA+ AGVSNPYLSQIERGLRKPSADVL QIAK Sbjct: 27 ARVVSSAAHDIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSADVLAQIAK 86 Query: 68 ALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEA---AG 124 LRVS+EVLYV+AG LE S +RDA++ + +I ERQKQVLL+IY SF ++NE+ A Sbjct: 87 GLRVSSEVLYVQAGYLEQRPHSPIRDAVLAETAINERQKQVLLEIYDSFCRENESSRPAA 146 Query: 125 EPEGAAVIPSPDEE 138 P+ A PD E Sbjct: 147 APDFAESAAIPDTE 160 >tr|D5UY00|D5UY00_TSUPA Tax_Id=521096 SubName: Full=Transcriptional regulator, XRE family;[Tsukamurella paurometabola DSM 20162] Length = 128 Score = 158 bits (400), Expect = 2e-37 Identities = 81/111 (72%), Positives = 96/111 (86%) Query: 13 NAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVS 72 ++ + +G FIRAQR AA+VS+RQLAEKAGVSNPYLSQIERGLR+PSADVL QIAKALR+S Sbjct: 11 SSGEGLGEFIRAQRIAAEVSIRQLAEKAGVSNPYLSQIERGLRRPSADVLGQIAKALRLS 70 Query: 73 AEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAA 123 AEVLYV+AGILE S VRDA++ D +ITERQKQ LL+IY SFR++NE A Sbjct: 71 AEVLYVQAGILEERPESPVRDALIADTAITERQKQALLEIYESFRRENETA 121 >tr|A4FQ27|A4FQ27_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator, XRE family;[Saccharopolyspora erythraea] Length = 148 Score = 151 bits (382), Expect = 2e-35 Identities = 80/143 (55%), Positives = 103/143 (72%), Gaps = 4/143 (2%) Query: 4 DENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLN 63 D+ + V+ A D+G++IR QR AQ+S+RQLA++AGVSNPYLSQ+ERGLRKPSA++L Sbjct: 5 DKTVNKAVNQAVSDLGAYIRTQRGNAQISLRQLAKRAGVSNPYLSQVERGLRKPSAEILQ 64 Query: 64 QIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQN--- 120 QIAKALR+SAE LYV+AGILE E V DAI+ D + ERQKQVLLDIY +FR++ Sbjct: 65 QIAKALRISAEALYVQAGILERREGGPVVDAILADPDLNERQKQVLLDIYGTFRREQGGP 124 Query: 121 -EAAGEPEGAAVIPSPDEEPATD 142 A G PEG + +P T+ Sbjct: 125 AAADGAPEGTTSATADAAQPQTE 147 >tr|C6WPM0|C6WPM0_ACTMD Tax_Id=446462 SubName: Full=Transcriptional regulator, XRE family;[Actinosynnema mirum] Length = 128 Score = 144 bits (362), Expect = 5e-33 Identities = 71/124 (57%), Positives = 94/124 (75%) Query: 4 DENLAAVVSNAAQDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLN 63 D+++ V++ + IG +I+ QR +A++S+RQL++ AGVSNPYLSQIERGLRKPSA++L Sbjct: 2 DKSIDEAVADLGRGIGDYIKEQRNSAKISLRQLSKLAGVSNPYLSQIERGLRKPSAEILQ 61 Query: 64 QIAKALRVSAEVLYVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAA 123 QIAK LR+SAE LYV AGIL+ E + DAI +TERQKQVLLD+Y SFR++N A Sbjct: 62 QIAKGLRISAEALYVEAGILQQREGGALADAITTASDLTERQKQVLLDVYASFRRENAAT 121 Query: 124 GEPE 127 PE Sbjct: 122 AVPE 125 >tr|D1A4M3|D1A4M3_THECD Tax_Id=471852 SubName: Full=Transcriptional regulator, XRE family;[Thermomonospora curvata] Length = 145 Score = 143 bits (361), Expect = 6e-33 Identities = 74/117 (63%), Positives = 94/117 (80%), Gaps = 1/117 (0%) Query: 18 IGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVLY 77 IG +IR QR+ A++S+RQLA+ +G+SNPYLSQIERGLRKPSA++L QIAK LR+SAE LY Sbjct: 9 IGEYIREQRQRAKISLRQLADVSGISNPYLSQIERGLRKPSAEILQQIAKGLRISAEALY 68 Query: 78 VRAGILEPSE-PSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGEPEGAAVIP 133 V+AGILE E ++V+ AI D+++TERQKQVLLDIY SFR++NEAA G P Sbjct: 69 VQAGILEDREADTDVQTAIRADLNLTERQKQVLLDIYESFRRENEAAATAAGGRARP 125 >tr|D3DCB4|D3DCB4_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, XRE family;[Frankia sp. EUN1f] Length = 284 Score = 143 bits (361), Expect = 6e-33 Identities = 75/121 (61%), Positives = 94/121 (77%), Gaps = 1/121 (0%) Query: 16 QDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEV 75 +D+G FIR QR AQ+S+RQLA +AGVSNPYLSQIERGLR+PSA++L QIAKALR+SAEV Sbjct: 7 KDVGDFIREQRHGAQISLRQLARQAGVSNPYLSQIERGLRRPSAEILQQIAKALRISAEV 66 Query: 76 LYVRAGILEPSEPSEVRDAIVN-DVSITERQKQVLLDIYTSFRQQNEAAGEPEGAAVIPS 134 LYV+AGILE E E A V+ D ++TERQKQV++DIY +FR++N G GA + Sbjct: 67 LYVQAGILEEREGGEDLIAAVHADDTLTERQKQVIVDIYDAFRRENALTGASSGAKPAET 126 Query: 135 P 135 P Sbjct: 127 P 127 >tr|D1VCC6|D1VCC6_9ACTO Tax_Id=298654 SubName: Full=Transcriptional regulator, XRE family;[Frankia sp. EuI1c] Length = 273 Score = 143 bits (360), Expect = 8e-33 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 10/135 (7%) Query: 16 QDIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEV 75 +++G +IR QR AA +S+RQLA++AGVSNPYLSQIERGLRKPSA++L QIAKALR+SAEV Sbjct: 7 RELGDYIRDQRRAAHISLRQLAQQAGVSNPYLSQIERGLRKPSAEILQQIAKALRISAEV 66 Query: 76 LYVRAGILEPSEPSE-VRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGE--------- 125 LYV+AGILE E E V A++ D +T RQKQV+LDIY +FR++N AA + Sbjct: 67 LYVQAGILEEREGGEDVHAAVLADEVLTARQKQVILDIYDAFRRENAAAADLAASAMTAA 126 Query: 126 PEGAAVIPSPDEEPA 140 E +A P P EP+ Sbjct: 127 DETSAEAPRPAAEPS 141 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.310 0.126 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 979,379,446 Number of extensions: 33884263 Number of successful extensions: 116521 Number of sequences better than 10.0: 6415 Number of HSP's gapped: 118979 Number of HSP's successfully gapped: 6431 Length of query: 142 Length of database: 4,236,830,644 Length adjustment: 106 Effective length of query: 36 Effective length of database: 2,910,997,060 Effective search space: 104795894160 Effective search space used: 104795894160 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 75 (33.5 bits)