BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_1014 (356 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QR77|A0QR77_MYCS2 Tax_Id=246196 (dinB)SubName: Full=DNA pol... 650 0.0 tr|Q1BB13|Q1BB13_MYCSS Tax_Id=164756 SubName: Full=DNA-directed ... 501 e-140 tr|A3PXF4|A3PXF4_MYCSJ Tax_Id=164757 SubName: Full=DNA-directed ... 501 e-140 tr|A1UE02|A1UE02_MYCSK Tax_Id=189918 SubName: Full=DNA-directed ... 501 e-140 tr|A1T6Q4|A1T6Q4_MYCVP Tax_Id=350058 SubName: Full=DNA-directed ... 499 e-139 tr|D5PIP3|D5PIP3_9MYCO Tax_Id=525368 (dinB)SubName: Full=DNA-dir... 484 e-135 tr|A4TDT5|A4TDT5_MYCGI Tax_Id=350054 SubName: Full=DNA-directed ... 481 e-134 tr|Q73VA8|Q73VA8_MYCPA Tax_Id=1770 (dinP)SubName: Full=DinP;[Myc... 472 e-131 tr|A0QJJ8|A0QJJ8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 467 e-129 sp|P63987|DPO42_MYCTU Tax_Id=1773 (dinB2)RecName: Full=DNA polym... 447 e-123 sp|P63988|DPO42_MYCBO Tax_Id=1765 (dinB2)RecName: Full=DNA polym... 447 e-123 tr|C6DVK3|C6DVK3_MYCTK Tax_Id=478434 SubName: Full=DNA-damage-in... 447 e-123 tr|C1AGH5|C1AGH5_MYCBT Tax_Id=561275 (dinP)SubName: Full=DNA pol... 447 e-123 tr|A5WRW1|A5WRW1_MYCTF Tax_Id=336982 SubName: Full=DNA-damage-in... 447 e-123 tr|A5U770|A5U770_MYCTA Tax_Id=419947 (dinP)SubName: Full=DNA-dam... 447 e-123 tr|A1KN54|A1KN54_MYCBP Tax_Id=410289 (dinP)SubName: Full=Possibl... 447 e-123 tr|D6G1B6|D6G1B6_MYCTU Tax_Id=478435 SubName: Full=DNA-damage-in... 447 e-123 tr|D6FQ34|D6FQ34_MYCTU Tax_Id=611304 SubName: Full=DNA-damage-in... 447 e-123 tr|D6FKV3|D6FKV3_MYCTU Tax_Id=611303 SubName: Full=DNA-damage-in... 447 e-123 tr|D6F938|D6F938_MYCTU Tax_Id=611302 SubName: Full=DNA-damage-in... 447 e-123 tr|D5ZKR2|D5ZKR2_MYCTU Tax_Id=537210 SubName: Full=DNA-damage-in... 447 e-123 tr|D5Z7P2|D5Z7P2_MYCTU Tax_Id=537209 SubName: Full=DNA-damage-in... 447 e-123 tr|D5YVZ9|D5YVZ9_MYCTU Tax_Id=515616 SubName: Full=DNA-damage-in... 447 e-123 tr|D5YJ18|D5YJ18_MYCTU Tax_Id=520140 SubName: Full=DNA polymeras... 447 e-123 tr|D5Y7X3|D5Y7X3_MYCTU Tax_Id=520141 SubName: Full=DNA polymeras... 447 e-123 tr|D5XY55|D5XY55_MYCTU Tax_Id=515617 SubName: Full=DNA-damage-in... 447 e-123 tr|A4KKV9|A4KKV9_MYCTU Tax_Id=395095 SubName: Full=DNA-damage-in... 447 e-123 tr|A2VNM2|A2VNM2_MYCTU Tax_Id=348776 SubName: Full=DNA-damage-in... 447 e-123 tr|C8X739|C8X739_NAKMY Tax_Id=479431 SubName: Full=DNA-directed ... 354 9e-96 tr|Q5YMX4|Q5YMX4_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p... 350 1e-94 tr|C7QDQ6|C7QDQ6_CATAD Tax_Id=479433 SubName: Full=DNA-directed ... 348 5e-94 tr|D2Q2J2|D2Q2J2_KRIFD Tax_Id=479435 SubName: Full=DNA-directed ... 345 4e-93 tr|D0L509|D0L509_GORB4 Tax_Id=526226 SubName: Full=DNA-directed ... 322 4e-86 tr|Q0SG21|Q0SG21_RHOSR Tax_Id=101510 SubName: Full=Probable DNA ... 318 9e-85 tr|C1AXE2|C1AXE2_RHOOB Tax_Id=632772 (dinB)SubName: Full=DNA pol... 317 2e-84 tr|A1SN18|A1SN18_NOCSJ Tax_Id=196162 SubName: Full=DNA-directed ... 312 5e-83 tr|C5C0B1|C5C0B1_BEUC1 Tax_Id=471853 SubName: Full=DNA-directed ... 308 6e-82 tr|A1RAR8|A1RAR8_ARTAT Tax_Id=290340 SubName: Full=Putative DNA ... 302 4e-80 tr|A0JWI1|A0JWI1_ARTS2 Tax_Id=290399 SubName: Full=DNA-directed ... 299 4e-79 tr|B8HF60|B8HF60_ARTCA Tax_Id=452863 SubName: Full=DNA-directed ... 297 2e-78 tr|A3TP81|A3TP81_9MICO Tax_Id=313589 SubName: Full=DNA polymeras... 286 4e-75 tr|A4FGB0|A4FGB0_SACEN Tax_Id=405948 (dinP)SubName: Full=DNA pol... 281 1e-73 tr|C7MZD4|C7MZD4_SACVD Tax_Id=471857 SubName: Full=Nucleotidyltr... 206 5e-51 tr|A8LY56|A8LY56_SALAI Tax_Id=391037 SubName: Full=DNA-directed ... 201 9e-50 tr|D2SA67|D2SA67_GEOOG Tax_Id=526225 SubName: Full=DNA-directed ... 200 2e-49 >tr|A0QR77|A0QR77_MYCS2 Tax_Id=246196 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 356 Score = 650 bits (1676), Expect = 0.0 Identities = 330/356 (92%), Positives = 330/356 (92%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG Sbjct: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD Sbjct: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 Query: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPP 180 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPP Sbjct: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPP 180 Query: 181 DALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSE 240 DALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPST DTEVSSE Sbjct: 181 DALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTGLWLLLLAKGGGDTEVSSE 240 Query: 241 PWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTR 300 PWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQG FYTR Sbjct: 241 PWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGRIVTRVAVTVRTSTFYTR 300 Query: 301 TKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVTAGT 356 TKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVTAGT Sbjct: 301 TKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVTAGT 356 >tr|Q1BB13|Q1BB13_MYCSS Tax_Id=164756 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 355 Score = 501 bits (1291), Expect = e-140 Identities = 254/350 (72%), Positives = 280/350 (80%), Gaps = 4/350 (1%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 M +W+LHVDLDQFLASVELRR P+L G PVIVGGSGDP+EPRKVVTCASY AREFGVHAG Sbjct: 1 MPRWILHVDLDQFLASVELRRHPELAGLPVIVGGSGDPTEPRKVVTCASYRAREFGVHAG 60 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 MPLR AARRCPDATFLPSD AAYDEASEQVMGLLRDLGHP+EVWGWDEAYLGAD+ D Sbjct: 61 MPLRVAARRCPDATFLPSDTAAYDEASEQVMGLLRDLGHPVEVWGWDEAYLGADV---ED 117 Query: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPP 180 P +AERIR VVA TGLSCSVGISDNKQRAKVATGF KPAG+++LT+ANWM VMGDRP Sbjct: 118 PFALAERIREVVAG-TGLSCSVGISDNKQRAKVATGFGKPAGVFMLTDANWMAVMGDRPV 176 Query: 181 DALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSE 240 DALWGVGPKT KKL A+GITTVADLA TD +VLT+ FGP+T D VS+ Sbjct: 177 DALWGVGPKTAKKLTALGITTVADLAATDAAVLTSTFGPTTGLWILLLAKGGGDDTVSAA 236 Query: 241 PWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTR 300 PWVPRSRSHVVTFP DLT+R EM +AV LA QTL E+VE G FYTR Sbjct: 237 PWVPRSRSHVVTFPHDLTDRAEMTAAVTRLAEQTLTEVVEAGRVVTRVAVTVRTSTFYTR 296 Query: 301 TKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRP 350 TKIRKL AP+T+AG + TAL VL F+LDRP+RLLGVRLELAM + P+P Sbjct: 297 TKIRKLSAPTTEAGVVTATALDVLALFDLDRPIRLLGVRLELAMPEAPKP 346 >tr|A3PXF4|A3PXF4_MYCSJ Tax_Id=164757 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 355 Score = 501 bits (1291), Expect = e-140 Identities = 254/350 (72%), Positives = 280/350 (80%), Gaps = 4/350 (1%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 M +W+LHVDLDQFLASVELRR P+L G PVIVGGSGDP+EPRKVVTCASY AREFGVHAG Sbjct: 1 MPRWILHVDLDQFLASVELRRHPELAGLPVIVGGSGDPTEPRKVVTCASYRAREFGVHAG 60 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 MPLR AARRCPDATFLPSD AAYDEASEQVMGLLRDLGHP+EVWGWDEAYLGAD+ D Sbjct: 61 MPLRVAARRCPDATFLPSDTAAYDEASEQVMGLLRDLGHPVEVWGWDEAYLGADV---ED 117 Query: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPP 180 P +AERIR VVA TGLSCSVGISDNKQRAKVATGF KPAG+++LT+ANWM VMGDRP Sbjct: 118 PFALAERIREVVAG-TGLSCSVGISDNKQRAKVATGFGKPAGVFMLTDANWMAVMGDRPV 176 Query: 181 DALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSE 240 DALWGVGPKT KKL A+GITTVADLA TD +VLT+ FGP+T D VS+ Sbjct: 177 DALWGVGPKTAKKLTALGITTVADLAATDAAVLTSTFGPTTGLWILLLAKGGGDDTVSAA 236 Query: 241 PWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTR 300 PWVPRSRSHVVTFP DLT+R EM +AV LA QTL E+VE G FYTR Sbjct: 237 PWVPRSRSHVVTFPHDLTDRAEMTAAVTRLAEQTLTEVVEAGRVVTRVAVTVRTSTFYTR 296 Query: 301 TKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRP 350 TKIRKL AP+T+AG + TAL VL F+LDRP+RLLGVRLELAM + P+P Sbjct: 297 TKIRKLSAPTTEAGVVTATALDVLALFDLDRPIRLLGVRLELAMPEAPKP 346 >tr|A1UE02|A1UE02_MYCSK Tax_Id=189918 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 355 Score = 501 bits (1291), Expect = e-140 Identities = 254/350 (72%), Positives = 280/350 (80%), Gaps = 4/350 (1%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 M +W+LHVDLDQFLASVELRR P+L G PVIVGGSGDP+EPRKVVTCASY AREFGVHAG Sbjct: 1 MPRWILHVDLDQFLASVELRRHPELAGLPVIVGGSGDPTEPRKVVTCASYRAREFGVHAG 60 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 MPLR AARRCPDATFLPSD AAYDEASEQVMGLLRDLGHP+EVWGWDEAYLGAD+ D Sbjct: 61 MPLRVAARRCPDATFLPSDTAAYDEASEQVMGLLRDLGHPVEVWGWDEAYLGADV---ED 117 Query: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPP 180 P +AERIR VVA TGLSCSVGISDNKQRAKVATGF KPAG+++LT+ANWM VMGDRP Sbjct: 118 PFALAERIREVVAG-TGLSCSVGISDNKQRAKVATGFGKPAGVFMLTDANWMAVMGDRPV 176 Query: 181 DALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSE 240 DALWGVGPKT KKL A+GITTVADLA TD +VLT+ FGP+T D VS+ Sbjct: 177 DALWGVGPKTAKKLTALGITTVADLAATDAAVLTSTFGPTTGLWILLLAKGGGDDTVSAA 236 Query: 241 PWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTR 300 PWVPRSRSHVVTFP DLT+R EM +AV LA QTL E+VE G FYTR Sbjct: 237 PWVPRSRSHVVTFPHDLTDRAEMTAAVTRLAEQTLTEVVEAGRVVTRVAVTVRTSTFYTR 296 Query: 301 TKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRP 350 TKIRKL AP+T+AG + TAL VL F+LDRP+RLLGVRLELAM + P+P Sbjct: 297 TKIRKLSAPTTEAGVVTATALDVLALFDLDRPIRLLGVRLELAMPEAPKP 346 >tr|A1T6Q4|A1T6Q4_MYCVP Tax_Id=350058 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 354 Score = 499 bits (1285), Expect = e-139 Identities = 251/347 (72%), Positives = 282/347 (81%), Gaps = 3/347 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVD+DQFLASVEL+R P+L G PVIVGGSGDP+EPRKVVTCASYEAR+FGVHAGMP Sbjct: 11 EWILHVDMDQFLASVELQRHPELVGHPVIVGGSGDPTEPRKVVTCASYEARQFGVHAGMP 70 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR+AARRCPDATFLPSDP AYD ASE+VMGLLRDLGHP+EVWGWDEAY+GA + +DP+ Sbjct: 71 LRSAARRCPDATFLPSDPEAYDAASERVMGLLRDLGHPIEVWGWDEAYVGARV---ADPL 127 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 +A RI+ VVAAETGLSCSVGISDNKQRAKVATGF KPAG++ LT+ NWM MGDRP DA Sbjct: 128 ALAHRIQHVVAAETGLSCSVGISDNKQRAKVATGFGKPAGVHALTDDNWMLTMGDRPVDA 187 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKT KKLAAMGITTVADLA TD +VLTTAFGP+T DT+VS+EPW Sbjct: 188 LWGVGPKTAKKLAAMGITTVADLAGTDAAVLTTAFGPTTGLWILLLAKGGGDTKVSAEPW 247 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSHVVTFPQDLT+R EM AV DLA TLAE+ EQ FYTRTK Sbjct: 248 VPRSRSHVVTFPQDLTDRSEMARAVADLAQYTLAEVTEQQRVVTRVAVTVRTSTFYTRTK 307 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPR 349 IRKL +P+TD+ +V TAL +L QF+LDRPVRLLGVRLEL M D R Sbjct: 308 IRKLSSPTTDSDPVVGTALDLLGQFDLDRPVRLLGVRLELVMPDSER 354 >tr|D5PIP3|D5PIP3_9MYCO Tax_Id=525368 (dinB)SubName: Full=DNA-directed DNA polymerase IV; EC=2.7.7.7;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 347 Score = 484 bits (1247), Expect = e-135 Identities = 245/343 (71%), Positives = 273/343 (79%), Gaps = 3/343 (0%) Query: 4 WVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPL 63 WVLHVDLDQFLASVELRR P+L G PVIVGG+GDP+EPRKVVTCASYEAREFGVHAGMPL Sbjct: 8 WVLHVDLDQFLASVELRRHPELAGLPVIVGGNGDPTEPRKVVTCASYEAREFGVHAGMPL 67 Query: 64 RAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPVE 123 RAAARRCP+ATFLPSD AAYD ASEQVMGLLRD+GHP+EVWGWDEAY+G +DP Sbjct: 68 RAAARRCPEATFLPSDAAAYDAASEQVMGLLRDVGHPVEVWGWDEAYVGVAT---ADPTG 124 Query: 124 VAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDAL 183 VAE IRTV+A+ETGLSCS+GISDNKQRAKVATGFAKPAGI+ LT+ANWMT+M DRP DAL Sbjct: 125 VAEEIRTVIASETGLSCSIGISDNKQRAKVATGFAKPAGIFTLTDANWMTLMADRPVDAL 184 Query: 184 WGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPWV 243 WGVGPKT KKLAA+ ITTV +LA +D LT+AFGP T DT VS+EPW+ Sbjct: 185 WGVGPKTAKKLAALEITTVRELAHSDAEPLTSAFGPRTGLWLLLLAKGGGDTGVSAEPWI 244 Query: 244 PRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTKI 303 PRSRSHVVTFP+DLT+R EMDS+V L Q L +++ G FYTRTKI Sbjct: 245 PRSRSHVVTFPRDLTDRAEMDSSVTQLTEQALTDVLAAGRVVTRVAVTVRTATFYTRTKI 304 Query: 304 RKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDD 346 RKL AP+TD IV AL VLD FELDRPVRLLGVRLELAM + Sbjct: 305 RKLEAPTTDRDTIVAAALRVLDLFELDRPVRLLGVRLELAMPE 347 >tr|A4TDT5|A4TDT5_MYCGI Tax_Id=350054 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium gilvum] Length = 357 Score = 481 bits (1239), Expect = e-134 Identities = 242/351 (68%), Positives = 278/351 (79%), Gaps = 8/351 (2%) Query: 4 WVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPL 63 WVLHVD+DQFLASVEL+RRPDL G PVIVGG+GDP+EPRKVVTCASYEAR FGVHAGMPL Sbjct: 12 WVLHVDMDQFLASVELQRRPDLVGLPVIVGGNGDPAEPRKVVTCASYEARTFGVHAGMPL 71 Query: 64 RAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPVE 123 RAAARRCPDATFLPSDP AYD AS++VMG+LRDLGHP+EVWGWDEAY+GA + SDP Sbjct: 72 RAAARRCPDATFLPSDPEAYDAASDRVMGILRDLGHPVEVWGWDEAYVGARV---SDPFA 128 Query: 124 VAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDAL 183 +A I+TVVA++TGL+CSVGISDNKQRAKVATGF KPAG+++LT+ NWM VMGDRP DAL Sbjct: 129 LARHIQTVVASQTGLTCSVGISDNKQRAKVATGFGKPAGVHMLTDENWMPVMGDRPVDAL 188 Query: 184 WGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPWV 243 WGVGPKT KKLAA+GITTVADLA TD + LT FGP+T DT VS+EPWV Sbjct: 189 WGVGPKTAKKLAAIGITTVADLAGTDSAELTKTFGPTTGLWILLLAKGGGDTTVSAEPWV 248 Query: 244 PRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTKI 303 PRSRSHV+TFPQDLTER MD AV +LA +TL E++ Q F+TR+KI Sbjct: 249 PRSRSHVITFPQDLTERAAMDEAVTELARRTLDEVIAQQRIVTHVAVTLRTSSFHTRSKI 308 Query: 304 RKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVTA 354 RKLP P+ DA ++ TA +LD F+L RPVRLLGVRLELAM P+ TA Sbjct: 309 RKLPEPTIDADAVISTATTLLDAFDLQRPVRLLGVRLELAM-----PSATA 354 >tr|Q73VA8|Q73VA8_MYCPA Tax_Id=1770 (dinP)SubName: Full=DinP;[Mycobacterium paratuberculosis] Length = 347 Score = 472 bits (1214), Expect = e-131 Identities = 241/347 (69%), Positives = 271/347 (78%), Gaps = 6/347 (1%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +WVLHVDLDQFLASVELRRRP+L G PVIVGG+GDP+EPRKVVTCASYEAREFGV AGMP Sbjct: 4 RWVLHVDLDQFLASVELRRRPELAGLPVIVGGNGDPNEPRKVVTCASYEAREFGVRAGMP 63 Query: 63 LRAAARRCPD---ATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDES 119 LRAAARRCP TFLPSDPAAYD AS+QVMGLLRDLGHP+EVWGWDEAYL + Sbjct: 64 LRAAARRCPPDSGVTFLPSDPAAYDAASDQVMGLLRDLGHPVEVWGWDEAYLAVTA---T 120 Query: 120 DPVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRP 179 DP+EVAE+IR V+++ETGL+CSVGISDNKQRAK+ATGFAKP G++VLT+ANWM +M DRP Sbjct: 121 DPIEVAEQIRGVISSETGLTCSVGISDNKQRAKIATGFAKPDGVFVLTDANWMALMADRP 180 Query: 180 PDALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSS 239 DALWGVGPKT KKLA + ITTV LA +D +LT FGP T D VS+ Sbjct: 181 VDALWGVGPKTAKKLADLQITTVWQLAHSDAELLTATFGPRTGLWLLLLAKGGGDDHVSA 240 Query: 240 EPWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYT 299 +PWVPRSRSHVVTFP+DLT+R EM++AV DLA Q +AE++ G FYT Sbjct: 241 QPWVPRSRSHVVTFPRDLTDRAEMETAVTDLADQAVAEVLTAGRVVTRVAVTVRTATFYT 300 Query: 300 RTKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDD 346 RTKIRKL APSTD IV AL VLD FELDRPVRLLGVRLEL M D Sbjct: 301 RTKIRKLDAPSTDRDVIVAAALRVLDLFELDRPVRLLGVRLELVMPD 347 >tr|A0QJJ8|A0QJJ8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase IV 2; EC=2.7.7.7;[Mycobacterium avium] Length = 342 Score = 467 bits (1201), Expect = e-129 Identities = 240/345 (69%), Positives = 269/345 (77%), Gaps = 6/345 (1%) Query: 5 VLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPLR 64 +LHVDLDQFLASVELRRRP+L G PVIVGG+GDP+EPRKVVTCASYEAREFGV AGMPLR Sbjct: 1 MLHVDLDQFLASVELRRRPELAGLPVIVGGNGDPNEPRKVVTCASYEAREFGVRAGMPLR 60 Query: 65 AAARRCPD---ATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDP 121 AAARRCP TFLPSDPAAYD AS+QVMGLLRDLGHP+EVWGWDEAYL +DP Sbjct: 61 AAARRCPPDSGVTFLPSDPAAYDAASDQVMGLLRDLGHPVEVWGWDEAYLAVTA---TDP 117 Query: 122 VEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPD 181 +EVAE+IR V+++ETGLSCSVGISDNKQRAK+ATGFAKP G++VLT+ANWM +M DRP D Sbjct: 118 IEVAEQIRGVISSETGLSCSVGISDNKQRAKIATGFAKPDGVFVLTDANWMALMADRPVD 177 Query: 182 ALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEP 241 ALWGVGPKT KKLA + ITTV LA +D +LT FGP T D VS++P Sbjct: 178 ALWGVGPKTAKKLADLQITTVWQLAHSDAELLTATFGPRTGLWLLLLAKGGGDDHVSAQP 237 Query: 242 WVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRT 301 WVPRSRSHVVTFP+DLT+R EM++AV DLA Q +AE++ G FYTRT Sbjct: 238 WVPRSRSHVVTFPRDLTDRAEMETAVTDLADQAVAEVLAAGRVVTRVAVTVRTATFYTRT 297 Query: 302 KIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDD 346 KIRKL APSTD IV AL VLD FELDRPVRLLGVRLEL M D Sbjct: 298 KIRKLDAPSTDRDVIVAAALRVLDLFELDRPVRLLGVRLELVMPD 342 >sp|P63987|DPO42_MYCTU Tax_Id=1773 (dinB2)RecName: Full=DNA polymerase IV 2; Short=Pol IV 2; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >sp|P63988|DPO42_MYCBO Tax_Id=1765 (dinB2)RecName: Full=DNA polymerase IV 2; Short=Pol IV 2; EC=2.7.7.7;[Mycobacterium bovis] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|C6DVK3|C6DVK3_MYCTK Tax_Id=478434 SubName: Full=DNA-damage-inducible protein P dinP;[Mycobacterium tuberculosis] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|C1AGH5|C1AGH5_MYCBT Tax_Id=561275 (dinP)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Mycobacterium bovis] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|A5WRW1|A5WRW1_MYCTF Tax_Id=336982 SubName: Full=DNA-damage-inducible protein P dinP (DNA polymerase V);[Mycobacterium tuberculosis] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|A5U770|A5U770_MYCTA Tax_Id=419947 (dinP)SubName: Full=DNA-damage-inducible protein P DinP;[Mycobacterium tuberculosis] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|A1KN54|A1KN54_MYCBP Tax_Id=410289 (dinP)SubName: Full=Possible DNA-damage-inducible protein P dinP;[Mycobacterium bovis] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D6G1B6|D6G1B6_MYCTU Tax_Id=478435 SubName: Full=DNA-damage-inducible protein P dinP;[Mycobacterium tuberculosis KZN 605] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D6FQ34|D6FQ34_MYCTU Tax_Id=611304 SubName: Full=DNA-damage-inducible protein P dinP;[Mycobacterium tuberculosis K85] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D6FKV3|D6FKV3_MYCTU Tax_Id=611303 SubName: Full=DNA-damage-inducible protein P dinP;[Mycobacterium tuberculosis CPHL_A] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D6F938|D6F938_MYCTU Tax_Id=611302 SubName: Full=DNA-damage-inducible protein P dinP;[Mycobacterium tuberculosis T46] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKCGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D5ZKR2|D5ZKR2_MYCTU Tax_Id=537210 SubName: Full=DNA-damage-inducible protein P dinP;[Mycobacterium tuberculosis T17] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKCGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D5Z7P2|D5Z7P2_MYCTU Tax_Id=537209 SubName: Full=DNA-damage-inducible protein P dinP (DNA polymerase V);[Mycobacterium tuberculosis GM 1503] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D5YVZ9|D5YVZ9_MYCTU Tax_Id=515616 SubName: Full=DNA-damage-inducible protein P DinP;[Mycobacterium tuberculosis 02_1987] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D5YJ18|D5YJ18_MYCTU Tax_Id=520140 SubName: Full=DNA polymerase IV 2;[Mycobacterium tuberculosis EAS054] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D5Y7X3|D5Y7X3_MYCTU Tax_Id=520141 SubName: Full=DNA polymerase IV 2;[Mycobacterium tuberculosis T85] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|D5XY55|D5XY55_MYCTU Tax_Id=515617 SubName: Full=DNA-damage-inducible protein P dinP;[Mycobacterium tuberculosis T92] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKCGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|A4KKV9|A4KKV9_MYCTU Tax_Id=395095 SubName: Full=DNA-damage-inducible protein P dinP (DNA polymerase V);[Mycobacterium tuberculosis str. Haarlem] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|A2VNM2|A2VNM2_MYCTU Tax_Id=348776 SubName: Full=DNA-damage-inducible protein P dinP (DNA polymerase V);[Mycobacterium tuberculosis C] Length = 346 Score = 447 bits (1149), Expect = e-123 Identities = 227/341 (66%), Positives = 260/341 (76%), Gaps = 1/341 (0%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQFLASVEL R P+L G PVIVGG+GDP+EPRKVVTCASYEAR +GV AGMP Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 LR AARRCP+ATFLPS+PAAY+ ASE+V+ LLRDLG+P+EVWGWDEAYL DP+ Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI 126 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 EVAE IR V+ ++TGLSCS+GISDNKQRAK+ATG AKPAGIY LT+ANWM +MGDR +A Sbjct: 127 EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEA 186 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVGPKTTK+LA +GI TV LA TD +L + FGP T DTEVS++ W Sbjct: 187 LWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRT-ALWLLLAKGGGDTEVSAQAW 245 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 VPRSRSH VTFP+DLT R EM+SAV +LA +TL E+V FYTRTK Sbjct: 246 VPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTK 305 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 IRKL APSTD I A VLD FELDRPVRLLGVRLELA Sbjct: 306 IRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA 346 >tr|C8X739|C8X739_NAKMY Tax_Id=479431 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Nakamurella multipartita] Length = 344 Score = 354 bits (909), Expect = 9e-96 Identities = 180/340 (52%), Positives = 224/340 (65%), Gaps = 3/340 (0%) Query: 4 WVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPL 63 W+ HVDLDQF SVE RRPDLRG+PV+VGG GDP+ R+VVTCASYEAR GV AG+P+ Sbjct: 5 WLFHVDLDQFQVSVERLRRPDLRGRPVVVGGDGDPARARQVVTCASYEARALGVRAGLPM 64 Query: 64 RAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPVE 123 R AAR+ PDA FLP D A Y+ AS QVM LR G PLEVWGWDEA+LG DP Sbjct: 65 RVAARKAPDAVFLPLDHAGYEAASAQVMDTLRGTGRPLEVWGWDEAFLGV---TADDPEP 121 Query: 124 VAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDAL 183 VA ++ +V TGL CS+GI DNK RAK ATGF KPAG+Y LT ANWM++MGDRP AL Sbjct: 122 VAAGLQALVRDTTGLPCSIGIGDNKLRAKTATGFGKPAGMYRLTGANWMSIMGDRPVRAL 181 Query: 184 WGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPWV 243 WGVG + + A GI TV +LA DP+ L +GP+T +TE+ EPW+ Sbjct: 182 WGVGARGAARFAEHGIATVRELAAADPAELVRWWGPTTGPRYRALARGEGETEIRIEPWI 241 Query: 244 PRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTKI 303 RSRSH T+ QDLTER ++ +R LA Q + ++V F+T + + Sbjct: 242 ARSRSHQRTYEQDLTERGVVERELRVLADQVVTDVVADDRVITRVAVVVRNSSFFTESHL 301 Query: 304 RKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 R LP P+T A + + A+++LD+FEL RPVRLLGVR+ELA Sbjct: 302 RTLPEPTTSAAVVGEAAVSLLDRFELRRPVRLLGVRVELA 341 >tr|Q5YMX4|Q5YMX4_NOCFA Tax_Id=37329 SubName: Full=Putative DNA polymerase IV family protein;[Nocardia farcinica] Length = 355 Score = 350 bits (899), Expect = 1e-94 Identities = 189/358 (52%), Positives = 226/358 (63%), Gaps = 19/358 (5%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 M +W+LHVDLDQF A+VE RR P+LRG+PVIVGG+GDP EPRKVVTCASY AR +GV AG Sbjct: 1 MARWLLHVDLDQFQAAVEFRRHPELRGRPVIVGGNGDPQEPRKVVTCASYPARAYGVRAG 60 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 MPLRAAAR+CPD FLP D AAY++AS++VM +LR +EVWGWDEA+L A D D Sbjct: 61 MPLRAAARKCPDGVFLPLDMAAYEDASDEVMAVLRTFPGTVEVWGWDEAFLAA---DTDD 117 Query: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPA---------------GIYV 165 P +A IR + AE L C++GI DNK AK+ATGFAK A G + Sbjct: 118 PELLAREIRGAI-AELDLGCAIGIGDNKLTAKLATGFAKSAGKSSAAPADDPGAATGTFR 176 Query: 166 LTEANWMTVMGDRPPDALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXX 225 LT ANW VMG RP ALWG+G + +LA +GI TVADL D L FGPST Sbjct: 177 LTAANWAEVMGHRPTAALWGIGNRIAARLAGLGIETVADLMAADRHRLAAEFGPSTGPYL 236 Query: 226 XXXXXXXXDTEVSSEPWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXX 285 DTEVSSEP VP RS TFP+DLT+ E+ + V +A E+ E G Sbjct: 237 WVLGHGKGDTEVSSEPRVPVGRSRSETFPRDLTDPAEIRAQVARIATAVAEEMAEAGRIT 296 Query: 286 XXXXXXXXXXXFYTRTKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 F+TR+K KLP P+ D I + AL V+D+FELDRPVRLLGVRLE A Sbjct: 297 VRVSVTVRTKTFFTRSKQTKLPEPTADVATITEAALRVIDRFELDRPVRLLGVRLEFA 354 >tr|C7QDQ6|C7QDQ6_CATAD Tax_Id=479433 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Catenulispora acidiphila] Length = 353 Score = 348 bits (894), Expect = 5e-94 Identities = 184/352 (52%), Positives = 229/352 (65%), Gaps = 4/352 (1%) Query: 2 TKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGM 61 T WVLHVDLDQF+A+VE+ RRP+LRG+PV+VGG+GDP+ R VV ASYEAREFGVH+GM Sbjct: 4 TDWVLHVDLDQFIAAVEVARRPELRGRPVVVGGAGDPTR-RGVVATASYEAREFGVHSGM 62 Query: 62 PLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDP 121 P+R AA++CP+ FLP+D AAY+ SE+VM LR+ +EV GWDEA++GA DP Sbjct: 63 PMRTAAKKCPECVFLPADRAAYEAVSERVMATLREFPVVVEVMGWDEAFVGART---DDP 119 Query: 122 VEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPD 181 +A IR V ETGLSCSVGI DNK RAK ATGFAKPAG++ LT +W VMGDRP D Sbjct: 120 EALAADIREAVLGETGLSCSVGIGDNKLRAKTATGFAKPAGVHRLTRESWAAVMGDRPTD 179 Query: 182 ALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEP 241 ALWG+G +T+KKLAA+G+ TVA+LA D +VL FGP D EV+ P Sbjct: 180 ALWGIGSRTSKKLAALGLHTVAELARADRAVLADQFGPKMGPYFWLLAQGAGDAEVTGTP 239 Query: 242 WVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRT 301 V + RS TF QD+ E E+ VR LA Q ++ ++ F T+T Sbjct: 240 HVAKGRSRETTFQQDIAEPAELAEHVRQLARQVAQDVADEARPAARVGLKIRYAPFVTKT 299 Query: 302 KIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVT 353 + LPAPS+DA +I AL V + ELDRPVRLLGVR+E D A T Sbjct: 300 RSITLPAPSSDAEEIERAALEVFELLELDRPVRLLGVRVEFVETDAGTVADT 351 >tr|D2Q2J2|D2Q2J2_KRIFD Tax_Id=479435 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Kribbella flavida] Length = 352 Score = 345 bits (886), Expect = 4e-93 Identities = 180/351 (51%), Positives = 225/351 (64%), Gaps = 11/351 (3%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 M+ W+LHVD+DQF+A+VE+RRRP+LRG PV+VGGSGDP + R+VV ASYEAR FGVH+G Sbjct: 1 MSWWLLHVDMDQFIAAVEIRRRPELRGVPVVVGGSGDPQQARQVVATASYEARAFGVHSG 60 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 MPLRAA R+CP+A FLPSDPAAY+ AS +VM LR +EVWGWDE ++GA D Sbjct: 61 MPLRAAYRKCPEAVFLPSDPAAYEAASAEVMDALRSFPVVVEVWGWDECFVGA---STDD 117 Query: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKP--------AGIYVLTEANWM 172 P ++A +R V TGL+CS+GI DNK RAK+ATGFAKP G + LT+ANW Sbjct: 118 PEQLAAELRAAVLDRTGLTCSIGIGDNKVRAKLATGFAKPGPDQRAGDGGTFRLTQANWA 177 Query: 173 TVMGDRPPDALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXX 232 VM RP LWG+G + ++ L +G+ TVADLA D L FGP Sbjct: 178 EVMHHRPVRDLWGIGARMSQNLNELGLHTVADLAAADLETLRQRFGPKMGTWYLALGRGL 237 Query: 233 XDTEVSSEPWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXX 292 DT+V+ P P SRSH VT+P+DLT+ E+ VR LA + E+V +G Sbjct: 238 GDTDVTDVPREPVSRSHEVTYPEDLTDPAEIQDKVRQLAEELTREVVAEGRWIQRVHVKV 297 Query: 293 XXXXFYTRTKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELA 343 F+T K RKLPAP+ D + D AL VL +FEL RPVRLLGVR E A Sbjct: 298 RFITFFTPIKSRKLPAPTQDPSVVADAALTVLAKFELRRPVRLLGVRAEFA 348 >tr|D0L509|D0L509_GORB4 Tax_Id=526226 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; Flags: Precursor;[Gordonia bronchialis] Length = 371 Score = 322 bits (826), Expect = 4e-86 Identities = 176/360 (48%), Positives = 219/360 (60%), Gaps = 16/360 (4%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +W+LHVDLDQF SVE R P+L PVIVGG+GDP+E RKVVTCASYEAR+ GVHAGMP Sbjct: 10 RWLLHVDLDQFQVSVERLRSPELVDVPVIVGGNGDPTEARKVVTCASYEARDVGVHAGMP 69 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGAD-------L 115 LRAA R+ PDA +LP D AYD AS +VM +LR GHP+EVWGWDEAYLG Sbjct: 70 LRAAYRKLPDAVYLPLDMGAYDAASAEVMDVLRAHGHPVEVWGWDEAYLGVGPAGSEIAA 129 Query: 116 PDESDPVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAK------PAG---IYVL 166 PD++ ++A R+R + A GL+ VGISDNKQRAK+ATGFAK P G +++L Sbjct: 130 PDDAAITDLAIRLREDIRARCGLTSCVGISDNKQRAKMATGFAKRPPEPDPTGGSKVFLL 189 Query: 167 TEANWMTVMGDRPPDALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXX 226 NW+ +MGDRP LW VGPKT KL+ GI TV DL L FGP Sbjct: 190 DGRNWLDLMGDRPTRDLWSVGPKTAAKLSGAGIETVRDLIAAPRDDLIAIFGPHQGNWLY 249 Query: 227 XXXXXXXDTEVSSEPWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXX 286 D +++EPW+ RS S TFPQDL + E SAV L + L +++ + Sbjct: 250 VLCRGGGDATITAEPWLARSHSKSRTFPQDLVDFDEKRSAVGSLLRELLDQVIVEERLPF 309 Query: 287 XXXXXXXXXXFYTRTKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDD 346 FYTRTK RKL P+T + +L +F+ DRPVRLLGVRL+L ++ Sbjct: 310 RVAVTVRTATFYTRTKSRKLREPTTSFDVLEPEVTGLLAKFDADRPVRLLGVRLDLVTEE 369 >tr|Q0SG21|Q0SG21_RHOSR Tax_Id=101510 SubName: Full=Probable DNA polymerase IV;[Rhodococcus sp.] Length = 347 Score = 318 bits (814), Expect = 9e-85 Identities = 172/340 (50%), Positives = 211/340 (62%), Gaps = 4/340 (1%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +WVLHVDLDQF+A+VE+ R P+LRG+PV+VGG GDP+E R VV+ ASYEAREFGV +GMP Sbjct: 8 RWVLHVDLDQFIAAVEVLRHPELRGRPVVVGGRGDPTE-RAVVSTASYEAREFGVGSGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 +R AAR+ PDA FLP D AY E S VM LR LG +EV GWDEA+LG + DP Sbjct: 67 MRIAARKIPDAVFLPVDAEAYTEVSGVVMDTLRKLGVVVEVMGWDEAFLGVET---EDPE 123 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 A + V TGL CSVGI DNK RAK+AT F KP GIY LTE NW VMG+RP DA Sbjct: 124 AFARTVHDAVLDATGLHCSVGIGDNKLRAKIATDFGKPQGIYRLTEENWFAVMGERPTDA 183 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWG+G KT KKLAA+GI+TV +LA L T GP+ + VS+EPW Sbjct: 184 LWGIGKKTAKKLAALGISTVRELADASDQELATTLGPNMGPWYARIGRGIDLSPVSAEPW 243 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 V RS S TF Q+L R + + LA + +I+ + F T T Sbjct: 244 VARSHSRETTFQQNLAGREAVTEEIIRLASRVREDILAENRRAVRVALKVRYAPFDTHTT 303 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLEL 342 + LP P+ D I D A A++D+ + DR VRLLGVRLE+ Sbjct: 304 SKPLPEPTFDPDVITDAAAALVDRLDHDREVRLLGVRLEM 343 >tr|C1AXE2|C1AXE2_RHOOB Tax_Id=632772 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Rhodococcus opacus] Length = 347 Score = 317 bits (812), Expect = 2e-84 Identities = 171/340 (50%), Positives = 209/340 (61%), Gaps = 4/340 (1%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +WVLHVDLDQF+A+VE+ R P+LRG PV+VGG GDP+E R VV+ ASYEAREFGV +GMP Sbjct: 8 RWVLHVDLDQFIAAVEVLRHPELRGLPVVVGGRGDPTE-RAVVSTASYEAREFGVGSGMP 66 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDPV 122 +R AAR+ PDA FLP D AY E S VM LR L +EV GWDEA+LG + DP Sbjct: 67 MRIAARKIPDAVFLPVDAEAYTEVSGVVMDTLRKLDVVVEVMGWDEAFLGVET---DDPE 123 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 A + V TGL CSVGI DNK RAK+AT F KP G+Y LTE NW VMG+RP DA Sbjct: 124 AFARGVHDAVLDATGLHCSVGIGDNKLRAKIATDFGKPQGVYRLTEENWFDVMGERPTDA 183 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWG+G KT KKLAA+GI TV +LA L GP+ + VS+EPW Sbjct: 184 LWGIGKKTAKKLAALGIGTVRELADASDQELAATLGPTMGPWYARIGRGIDHSPVSAEPW 243 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 V RS S TF Q+L R + +R LA + +I+ + F T T Sbjct: 244 VARSHSRETTFQQNLAGREAVTEEIRRLAARVREDILAENRKAVRVALKVRYAPFDTHTT 303 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLEL 342 + LP P+ D I D A A++D+ +LDR VRLLGVRLE+ Sbjct: 304 SKPLPEPTFDPDVIADAAAALVDRLDLDREVRLLGVRLEM 343 >tr|A1SN18|A1SN18_NOCSJ Tax_Id=196162 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Nocardioides sp.] Length = 362 Score = 312 bits (799), Expect = 5e-83 Identities = 173/346 (50%), Positives = 217/346 (62%), Gaps = 8/346 (2%) Query: 4 WVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPL 63 WVLHVDLDQF+A+VE+ RRP+L G+PV+VGG GDP+E R VV ASYEAR FGV +GMPL Sbjct: 9 WVLHVDLDQFIAAVEVLRRPELAGRPVVVGGRGDPTE-RGVVATASYEARAFGVGSGMPL 67 Query: 64 RAAARRCPDATFLPSDPAAYDEASEQVMGLLRDL---GHP--LEVWGWDEAYL--GADLP 116 R AAR+CPDA FLP D AYD AS QVM LR L G P LEV GWDEA+L G D Sbjct: 68 RVAARKCPDAVFLPVDKEAYDAASAQVMTTLRGLEWGGVPVVLEVLGWDEAFLAAGEDHG 127 Query: 117 DESDPVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMG 176 + +P E AE +R V AET L CSVGI DNK RAK+AT F KP G++ LTEA+W VMG Sbjct: 128 ELGNPREFAEHLRAEVLAETRLHCSVGIGDNKLRAKIATDFGKPRGVWQLTEADWFPVMG 187 Query: 177 DRPPDALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTE 236 +RP ALWG+G +T KKL+A+GI TV LA +D VL GP+ + Sbjct: 188 ERPTTALWGIGARTAKKLSALGIDTVEQLARSDARVLAAELGPTMGPWFHRLGRGVDTSP 247 Query: 237 VSSEPWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXX 296 V + PWVPR+ T+ +DL + + VR L + + +I +G Sbjct: 248 VDATPWVPRAHGREETYQEDLEDWDRVTEEVRALTRRVVDDIDREGRPAARVGIKVRYRP 307 Query: 297 FYTRTKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLEL 342 F T ++ LP PS D + D A+++L++ E RPVRLLGVRLE+ Sbjct: 308 FSTVSRSLTLPEPSNDPAVLEDAAVSLLERVERGRPVRLLGVRLEM 353 >tr|C5C0B1|C5C0B1_BEUC1 Tax_Id=471853 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Beutenbergia cavernae] Length = 353 Score = 308 bits (790), Expect = 6e-82 Identities = 164/341 (48%), Positives = 212/341 (62%), Gaps = 4/341 (1%) Query: 2 TKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGM 61 T WVLH+DLDQF+A+VE+ RRP+L G+PV+VGGSGDP++ R+VV ASYEAREFGVH+GM Sbjct: 11 TAWVLHLDLDQFIAAVEVLRRPELAGKPVVVGGSGDPTQRRQVVATASYEAREFGVHSGM 70 Query: 62 PLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESDP 121 PL A RRCPDA FLPSD AAYDEAS V +R +E GWDE ++GA +DP Sbjct: 71 PLTVAHRRCPDAVFLPSDHAAYDEASLHVWATVRTFPVLVEELGWDEGFIGA---RTADP 127 Query: 122 VEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPD 181 +A ++ V TGL CS+G+ D++ RAK ATGFAKP G++ LT WM VMG RP Sbjct: 128 EALARAVQAAVLEATGLHCSIGVGDSRLRAKTATGFAKPRGVHRLTAETWMPVMGQRPTR 187 Query: 182 ALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEP 241 LWGVGP+ +++LA +GI TVADLA D + L FGP+ D V+S P Sbjct: 188 DLWGVGPRISERLAGLGIRTVADLAAADEAALVAEFGPTNGPYVLDLGRGGSDARVASGP 247 Query: 242 WVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRT 301 RS VTFP DLT+ ++ V ++A + + F+T T Sbjct: 248 PPRMGRSREVTFPIDLTDAVDVLGHVLEMARELTTATLADSRLVARVAVKVREAPFFTST 307 Query: 302 KIRK-LPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLE 341 KI K LP P+ + + +TA VL++F RPVRLLGVR+E Sbjct: 308 KIAKVLPGPTAEVAVVEETAARVLERFGELRPVRLLGVRVE 348 >tr|A1RAR8|A1RAR8_ARTAT Tax_Id=290340 SubName: Full=Putative DNA polymerase IV;[Arthrobacter aurescens] Length = 357 Score = 302 bits (774), Expect = 4e-80 Identities = 167/351 (47%), Positives = 216/351 (61%), Gaps = 6/351 (1%) Query: 4 WVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPL 63 WVLHVDLDQF+A+VE+ RRP+L G+PVIVGG GDP+E R VV+ ASYEAR FGV +GMPL Sbjct: 6 WVLHVDLDQFIAAVEVLRRPELAGKPVIVGGRGDPTE-RAVVSTASYEARAFGVGSGMPL 64 Query: 64 RAAARRCPDATFLPSDPAAYDEASEQVMGLLRDL-GHPLEVWGWDEAYLGADLPDESDPV 122 R AAR+ PDA LP D AY ASE VM LR+ G ++V GWDEA++G + DP Sbjct: 65 RIAARKVPDAIILPVDQEAYLAASEMVMATLREQPGATVQVLGWDEAFVGIET---EDPE 121 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 A++I+ V T L CSVGI D RAK AT F KPAGI+ LT+ NW+ VMG RP Sbjct: 122 AYAKQIQAAVLERTQLHCSVGIGDTLVRAKNATDFGKPAGIFRLTKENWLDVMGSRPTKE 181 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVG K +++LA ITTVA+LA ++P L FGP +EV PW Sbjct: 182 LWGVGSKVSQRLAKHHITTVAELAASNPQDLVPEFGPKMGPWYAELGRGDGASEVDDTPW 241 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 V R S T+ QDLTE +++ AV++L L ++ +G F+T+T Sbjct: 242 VARGHSRETTYQQDLTEPSQIEDAVKELTAHVLEDVAAEGRPVIGLTLKVRYVPFFTKTY 301 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVT 353 RK+P S D G+++ AL + + E DRP+RLLG+R E++M D R T Sbjct: 302 ARKIP-ESFDRGEVLAQALDLTGKIEPDRPIRLLGLRAEMSMPDDARKGHT 351 >tr|A0JWI1|A0JWI1_ARTS2 Tax_Id=290399 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Arthrobacter sp.] Length = 357 Score = 299 bits (765), Expect = 4e-79 Identities = 165/352 (46%), Positives = 212/352 (60%), Gaps = 6/352 (1%) Query: 3 KWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMP 62 +WVLHVDLDQF+A+VE+ RRP+L G+P+IVGG GDP+E R VV ASYEAR FGV +GMP Sbjct: 5 RWVLHVDLDQFIAAVEVLRRPELAGKPIIVGGRGDPAE-RAVVATASYEARAFGVGSGMP 63 Query: 63 LRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDL-GHPLEVWGWDEAYLGADLPDESDP 121 LR AAR+ PDA LP D AY ASE VM LR G ++V GWDEA++G + +P Sbjct: 64 LRIAARKVPDAVILPVDQEAYLAASETVMATLRSQPGATVQVLGWDEAFVGTET---ENP 120 Query: 122 VEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPD 181 A +++ V T L CS+GI D RAKVATGF KPAG++ LT ANW+ VMGD P Sbjct: 121 EAYARQVQAAVLERTQLHCSIGIGDTLVRAKVATGFGKPAGVFRLTSANWLKVMGDLPTK 180 Query: 182 ALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEP 241 LWGVG K + +LA +GI TVA+LA TDP L FGP + V P Sbjct: 181 DLWGVGTKVSARLAKLGIHTVAELAATDPRDLVPEFGPRMGPWYAELGRGDGASVVDDTP 240 Query: 242 WVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRT 301 WV R S TF QDLT ++D AVR+L + L ++ +G F+T+T Sbjct: 241 WVARGHSRETTFQQDLTAPAQVDDAVRELTARVLEDVEAEGRPVVGLTLKVRYAPFFTKT 300 Query: 302 KIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVT 353 +K+P + D +I+ AL + E RP+RLLG+R E+AM + R T Sbjct: 301 HAKKIP-ETFDRDEILARALDLAAGIEAGRPIRLLGMRAEMAMPEDARKGHT 351 >tr|B8HF60|B8HF60_ARTCA Tax_Id=452863 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Arthrobacter chlorophenolicus] Length = 351 Score = 297 bits (760), Expect = 2e-78 Identities = 165/350 (47%), Positives = 212/350 (60%), Gaps = 6/350 (1%) Query: 5 VLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPLR 64 +LHVDLDQF+A+VE+ RRP+L G+PVIVGG GDP+E R VV+ ASYEAR FGV +GMPLR Sbjct: 1 MLHVDLDQFIAAVEVLRRPELAGKPVIVGGRGDPTE-RAVVSTASYEARAFGVGSGMPLR 59 Query: 65 AAARRCPDATFLPSDPAAYDEASEQVMGLLRDL-GHPLEVWGWDEAYLGADLPDESDPVE 123 AAR PDA LP D AY +AS +VMG+LR G ++V GWDEA++G SDP Sbjct: 60 IAARNVPDAVILPVDQEAYLQASGEVMGVLRSRPGAVVQVLGWDEAFVGVQ---SSDPEA 116 Query: 124 VAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDAL 183 A +++ V T L CSVGI D RAKVAT F KPAG++ LT NW+ VMG+RP L Sbjct: 117 YAGQLQQAVLEATRLHCSVGIGDTLVRAKVATTFGKPAGVFRLTAENWLDVMGNRPTIDL 176 Query: 184 WGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPWV 243 WGVG K +++LA +GITTVA+LA DP L FGP + V PWV Sbjct: 177 WGVGTKVSRRLATLGITTVAELAAVDPDFLVPEFGPKMGPWYAQLGRGDGSSVVDDTPWV 236 Query: 244 PRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTKI 303 R S TF DLTE ++D AVR+L L ++ +G F T+T Sbjct: 237 ARGHSRETTFQHDLTEPAQVDEAVRELVAAVLDDVAAEGRPVVGLTLKVRYAPFNTKTFA 296 Query: 304 RKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLELAMDDVPRPAVT 353 R++P + D +++ AL + + E DRP+RLLG+R E+ M D R T Sbjct: 297 RRIP-ETADPEEVLTRALDLRGKIEPDRPIRLLGLRAEMTMPDESRQGHT 345 >tr|A3TP81|A3TP81_9MICO Tax_Id=313589 SubName: Full=DNA polymerase IV;[Janibacter sp. HTCC2649] Length = 371 Score = 286 bits (731), Expect = 4e-75 Identities = 157/345 (45%), Positives = 204/345 (59%), Gaps = 4/345 (1%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 M +WVLHVDLDQF+A+VE+ RRP+L G PV+VGG GDP+E R VV+ ASYEAR FGVH+G Sbjct: 1 MARWVLHVDLDQFIAAVEILRRPELAGLPVVVGGRGDPTE-RAVVSTASYEARAFGVHSG 59 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDL-GHPLEVWGWDEAYLGADLP--D 117 MPL+ A R+ PDA FLP D AYD AS VM LR G ++V GWDEA++G P D Sbjct: 60 MPLKLAVRKIPDAVFLPVDGPAYDAASAVVMETLRAHDGAVVQVLGWDEAFVGISTPGDD 119 Query: 118 ESDPVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGD 177 ++ V A+ IR V + L CSVG+ D RAK+AT F KP G +VLT NW VMG+ Sbjct: 120 VAEAVAHADAIRAEVLEASELHCSVGVGDTTVRAKIATDFGKPQGTFVLTRDNWFEVMGE 179 Query: 178 RPPDALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEV 237 RP ALWGVG + +LA G +V LA D VLT FGP T + Sbjct: 180 RPTTALWGVGNRIAARLAEHGYESVQQLADADDEVLTAEFGPRMGPHYGRLGRGLGATVI 239 Query: 238 SSEPWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXF 297 PW+ R+ T+ +L E ++++A+ LA Q + +I + F Sbjct: 240 DDTPWIARAHGRETTYQSNLVEPDDIEAAIGTLADQVVEDIRREERACARVHLKVRFAPF 299 Query: 298 YTRTKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLEL 342 +T T+IRKLP P+ D I TA+ +L + RP+RLLGVR E+ Sbjct: 300 FTTTRIRKLPEPTYDPAVIAATAMELLHGLDDARPIRLLGVRAEM 344 >tr|A4FGB0|A4FGB0_SACEN Tax_Id=405948 (dinP)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 339 Score = 281 bits (718), Expect = 1e-73 Identities = 157/342 (45%), Positives = 205/342 (59%), Gaps = 4/342 (1%) Query: 1 MTKWVLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAG 60 M + VLHVDLDQF+ +VEL RRP+LRG+PV+VGG GDP+ R VV ASYEARE GV +G Sbjct: 1 MERIVLHVDLDQFIVAVELLRRPELRGRPVLVGGVGDPTR-RGVVAGASYEAREHGVRSG 59 Query: 61 MPLRAAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDESD 120 PLR AA RCPDA FLP D AY S + + +LR G +E GWDEA++ L D D Sbjct: 60 TPLRTAAARCPDAVFLPLDRDAYLAVSAEFIDVLRSGGGIVEEAGWDEAFM---LLDTDD 116 Query: 121 PVEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPP 180 + A ++ V TGL+CSVGI DNK RAK+A+GFAKPAG++ L NW V+G+RPP Sbjct: 117 AWQSALLVQAAVRERTGLACSVGIGDNKLRAKLASGFAKPAGVFRLDTRNWWEVVGERPP 176 Query: 181 DALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSE 240 +ALWG+G KT L+ GI+TV +LA DP+ L FGP+T T V+ E Sbjct: 177 EALWGIGRKTATYLSEFGISTVRELAGADPAALAARFGPNTGPWLVALARGYDPTPVTDE 236 Query: 241 PWVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTR 300 P+ RS TF ++L + E+ + + LA + A++ F T Sbjct: 237 PYQARSHGREETFERNLVDPDEVRANIARLAHRVAADLAAGDEVARRVVVKVRHAPFSTH 296 Query: 301 TKIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLEL 342 T R L +P+ + I AL L F+LDRP+RLLGVR E+ Sbjct: 297 THGRGLESPTREPEAIEAAALLALSAFDLDRPIRLLGVRAEI 338 >tr|C7MZD4|C7MZD4_SACVD Tax_Id=471857 SubName: Full=Nucleotidyltransferase/DNA polymerase involved in DNA repair; EC=2.7.7.7;[Saccharomonospora viridis] Length = 415 Score = 206 bits (523), Expect = 5e-51 Identities = 133/356 (37%), Positives = 186/356 (52%), Gaps = 18/356 (5%) Query: 5 VLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPLR 64 VLHVD+D F A+VELR RP+L QPV+V GSG PR VV A+Y AR FG+ + MP+ Sbjct: 29 VLHVDMDAFFAAVELRTRPELADQPVVVAGSG----PRAVVLSANYPARRFGISSAMPVA 84 Query: 65 AAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYL---GADLPDESDP 121 AA + CP A +LP Y E S VM L R++ +E DEA+L GA + Sbjct: 85 AARKLCPHAVYLPPSRGLYSEVSRSVMALFREITPLVEPLSLDEAFLDVGGALRRLGATA 144 Query: 122 VEVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPD 181 E+ R+R V AE G++CSVG++ K AK+A+G AKP G+ V+ ++ + P Sbjct: 145 TEIGARLRARVEAEHGVTCSVGVAGMKFVAKLASGMAKPDGMVVVPVEETVSFLHPLPVS 204 Query: 182 ALWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEP 241 ALWGVGPKT + L G+ T+AD+A T P L G +T + V E Sbjct: 205 ALWGVGPKTAEVLRGHGLHTIADIAATPPDRLRRWVGVATAEQLHALAHGRDERRVVPET 264 Query: 242 WVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRT 301 +S TF DL++R + DL+ + + + +G F T T Sbjct: 265 -EEKSLGAERTFDTDLSDREAQRRQLLDLSEKVASTLRHRGLRGRTVSIKVRFSDFRTVT 323 Query: 302 KIRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLE----------LAMDDV 347 + R LP+ + A +I TA+A+L++ PVRLLGVR+E L +DDV Sbjct: 324 RARTLPSATDVAREIHSTAVALLEEMGTTAPVRLLGVRVEGLSGATDAEQLTLDDV 379 >tr|A8LY56|A8LY56_SALAI Tax_Id=391037 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Salinispora arenicola] Length = 419 Score = 201 bits (512), Expect = 9e-50 Identities = 128/339 (37%), Positives = 178/339 (52%), Gaps = 7/339 (2%) Query: 5 VLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPLR 64 VLHVD+D F ASVE+R RP+LRG+PV+VGG G PR VV+ ASY AR +GV + MP Sbjct: 26 VLHVDMDAFFASVEVRHRPELRGRPVVVGGLG----PRGVVSSASYPARRYGVRSAMPTA 81 Query: 65 AAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDE--SDPV 122 A CP A FLP D AY AS VM + +D+ +E DEA+L P Sbjct: 82 RARALCPHAVFLPPDFTAYTTASRTVMQIFQDVTPLVEPLSLDEAFLDVAGAQRLFGQPS 141 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 +A IR VA E GL+CSVG++ +K AK+ + AKP G+ V+ A + + P +A Sbjct: 142 AIARLIRERVATEVGLTCSVGVASSKFVAKLGSTRAKPDGMLVVPTARVLDFLHPLPVEA 201 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTEVSSEPW 242 LWGVG ++ + L +G+TTV +LA +L A G + V+SE Sbjct: 202 LWGVGERSAETLRRLGLTTVGELAQAPDGMLRRALGTAAARHLRELAWGKDPRRVTSER- 260 Query: 243 VPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRTK 302 +S VTF D+T+RRE+ A+ LA + A + G F T ++ Sbjct: 261 EDKSIGAEVTFDADVTDRREIRRALLGLAEKVGARLRRSGQVGRTVALKVRLADFRTVSR 320 Query: 303 IRKLPAPSTDAGQIVDTALAVLDQFELDRPVRLLGVRLE 341 R L P+ ++ DTA A+ + P+RL+GVR E Sbjct: 321 SRSLDVPTDVGREMFDTAWALYTALDPGEPIRLVGVRAE 359 >tr|D2SA67|D2SA67_GEOOG Tax_Id=526225 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Geodermatophilus obscurus] Length = 402 Score = 200 bits (509), Expect = 2e-49 Identities = 137/342 (40%), Positives = 176/342 (51%), Gaps = 12/342 (3%) Query: 5 VLHVDLDQFLASVELRRRPDLRGQPVIVGGSGDPSEPRKVVTCASYEAREFGVHAGMPLR 64 VLHVD+D F ASVE+RRRP+L G PVIVGG+G+ R VVT A+YEAR +GVHA MP Sbjct: 14 VLHVDMDAFFASVEVRRRPELAGTPVIVGGAGN----RGVVTSATYEARRYGVHAAMPTS 69 Query: 65 AAARRCPDATFLPSDPAAYDEASEQVMGLLRDLGHPLEVWGWDEAYLGADLPDE--SDPV 122 A R CP AT LP D A Y E S VM L R + +E DEA+L D V Sbjct: 70 RALRLCPTATVLPGDVALYAEVSRSVMALFRSITPLVEPLSLDEAFLDVSGAGRRLGDAV 129 Query: 123 EVAERIRTVVAAETGLSCSVGISDNKQRAKVATGFAKPAGIYVLTEANWMTVMGDRPPDA 182 + E +R V E G++CSVG++ K AK+A+ AKP G+ V+ A M + P A Sbjct: 130 AIGEYLRARVFDEQGITCSVGVAGTKFVAKLASTAAKPDGLLVVRPAEVMAFLHPLPVGA 189 Query: 183 LWGVGPKTTKKLAAMGITTVADLAVTDPSVLTTAFGPSTXXXXXXXXXXXXDTE-VSSEP 241 LWGVG +T + L +G+ TV DLA L A GP+ V EP Sbjct: 190 LWGVGARTEEVLLRLGLRTVGDLAHVPVRTLQRAVGPAAGAHLHELSWGRDPRRVVPDEP 249 Query: 242 WVPRSRSHVVTFPQDLTERREMDSAVRDLALQTLAEIVEQGXXXXXXXXXXXXXXFYTRT 301 RS H TF D+ + + + L+ +T + G F T T Sbjct: 250 --ERSTGHEETFGTDVDDPAVIHRELLRLSERTAGRLRSGGWLARTVTIKVRFADFATIT 307 Query: 302 KIRKLPAPSTDAGQ-IVDTALAVLDQFELDRP-VRLLGVRLE 341 + R L +TD GQ + DTA A+ D LDR +RL+GVR E Sbjct: 308 RSRTLDV-ATDVGQEVYDTARALFDALGLDRARIRLVGVRAE 348 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.317 0.133 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,753,527,651 Number of extensions: 108904849 Number of successful extensions: 284893 Number of sequences better than 10.0: 3911 Number of HSP's gapped: 279330 Number of HSP's successfully gapped: 4171 Length of query: 356 Length of database: 4,236,830,644 Length adjustment: 139 Effective length of query: 217 Effective length of database: 2,498,237,548 Effective search space: 542117547916 Effective search space used: 542117547916 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 81 (35.8 bits)