BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_1125
         (217 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QRI1|A0QRI1_MYCS2 Tax_Id=246196 SubName: Full=Regulatory pr...   424   e-117
tr|A0QIE3|A0QIE3_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...   199   1e-49
tr|Q73WD5|Q73WD5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   199   2e-49
tr|D5PI80|D5PI80_9MYCO Tax_Id=525368 SubName: Full=Regulatory pr...   194   5e-48
tr|A1SCA7|A1SCA7_NOCSJ Tax_Id=196162 SubName: Full=Transcription...   189   3e-46
tr|Q1B143|Q1B143_MYCSS Tax_Id=164756 SubName: Full=Transcription...   188   4e-46
tr|A3Q8F5|A3Q8F5_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   188   4e-46
tr|A1UP07|A1UP07_MYCSK Tax_Id=189918 SubName: Full=Transcription...   188   4e-46
tr|B2HM67|B2HM67_MYCMM Tax_Id=216594 SubName: Full=Transcription...   187   8e-46
tr|A0PSZ9|A0PSZ9_MYCUA Tax_Id=362242 SubName: Full=Transcription...   187   8e-46
tr|O06191|O06191_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE TRANSC...   180   9e-44
tr|C6DM72|C6DM72_MYCTK Tax_Id=478434 SubName: Full=Transcription...   180   9e-44
tr|A5WQM8|A5WQM8_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   180   9e-44
tr|A5U5X2|A5U5X2_MYCTA Tax_Id=419947 SubName: Full=Putative tran...   180   9e-44
tr|A1THG3|A1THG3_MYCVP Tax_Id=350058 SubName: Full=Transcription...   180   9e-44
tr|D6G3R0|D6G3R0_MYCTU Tax_Id=478435 SubName: Full=Transcription...   180   9e-44
tr|D6FMR2|D6FMR2_MYCTU Tax_Id=611304 SubName: Full=Transcription...   180   9e-44
tr|D6FJJ1|D6FJJ1_MYCTU Tax_Id=611303 SubName: Full=Transcription...   180   9e-44
tr|D6F786|D6F786_MYCTU Tax_Id=611302 SubName: Full=Transcription...   180   9e-44
tr|D5ZJE4|D5ZJE4_MYCTU Tax_Id=537210 SubName: Full=Transcription...   180   9e-44
tr|D5YV38|D5YV38_MYCTU Tax_Id=515616 SubName: Full=Hypothetical ...   180   9e-44
tr|D5YKL8|D5YKL8_MYCTU Tax_Id=520140 SubName: Full=Transcription...   180   9e-44
tr|D5Y6P4|D5Y6P4_MYCTU Tax_Id=520141 SubName: Full=Transcription...   180   9e-44
tr|D5XWS3|D5XWS3_MYCTU Tax_Id=515617 SubName: Full=Transcription...   180   9e-44
tr|A2VKX3|A2VKX3_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   180   9e-44
tr|A4KJR2|A4KJR2_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   178   5e-43
tr|Q7TY77|Q7TY77_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC...   176   1e-42
tr|C1AF94|C1AF94_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   176   1e-42
tr|A1KLX3|A1KLX3_MYCBP Tax_Id=410289 SubName: Full=Possible tran...   176   1e-42
tr|D5Z6F2|D5Z6F2_MYCTU Tax_Id=537209 SubName: Full=Hypothetical ...   172   3e-41
tr|A1SII0|A1SII0_NOCSJ Tax_Id=196162 SubName: Full=Transcription...   169   2e-40
tr|C7MRY4|C7MRY4_SACVD Tax_Id=471857 SubName: Full=Predicted tra...   155   2e-36
tr|Q0RZI1|Q0RZI1_RHOSR Tax_Id=101510 SubName: Full=Possible tran...   154   5e-36
tr|C1AS60|C1AS60_RHOOB Tax_Id=632772 SubName: Full=Putative SufR...   148   5e-34
tr|C8XFI6|C8XFI6_NAKMY Tax_Id=479431 SubName: Full=Putative tran...   143   1e-32
tr|A0LS64|A0LS64_ACIC1 Tax_Id=351607 SubName: Full=Transcription...   137   7e-31
tr|C1AS79|C1AS79_RHOOB Tax_Id=632772 SubName: Full=Putative SufR...   137   1e-30
tr|Q0RZF9|Q0RZF9_RHOSR Tax_Id=101510 SubName: Full=Possible tran...   131   6e-29
tr|Q47L46|Q47L46_THEFY Tax_Id=269800 SubName: Full=Transcription...   130   1e-28
tr|A1SPR7|A1SPR7_NOCSJ Tax_Id=196162 SubName: Full=Transcription...   129   2e-28
tr|A8LYJ6|A8LYJ6_SALAI Tax_Id=391037 SubName: Full=Putative tran...   118   6e-25
tr|A4X1H1|A4X1H1_SALTO Tax_Id=369723 SubName: Full=Putative tran...   115   4e-24
tr|A1SNU3|A1SNU3_NOCSJ Tax_Id=196162 SubName: Full=Transcription...   114   8e-24
tr|D1VPH4|D1VPH4_9ACTO Tax_Id=298654 SubName: Full=Putative tran...   107   1e-21
tr|A1SGC3|A1SGC3_NOCSJ Tax_Id=196162 SubName: Full=Transcription...   102   2e-20

>tr|A0QRI1|A0QRI1_MYCS2 Tax_Id=246196 SubName: Full=Regulatory
           protein, ArsR;[Mycobacterium smegmatis]
          Length = 217

 Score =  424 bits (1090), Expect = e-117
 Identities = 211/217 (97%), Positives = 211/217 (97%)

Query: 1   MDTDTSLPPRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVV 60
           MDTDTSLPPRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVV
Sbjct: 1   MDTDTSLPPRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVV 60

Query: 61  GEAFGRGRPPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLV 120
           GEAFGRGRPPVLYRASRRMDPSGPTNYRLLASILTGYVARHPD      DLGRSTSPGLV
Sbjct: 61  GEAFGRGRPPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDAAAVAADLGRSTSPGLV 120

Query: 121 TTAPHGPSTRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCAL 180
           TTAPHGPSTRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCAL
Sbjct: 121 TTAPHGPSTRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCAL 180

Query: 181 HLGLMQGALRDLQAPVTVDRLEPFVEPDLCVAHLAPR 217
           HLGLMQGALRDLQAPVTVDRLEPFVEPDLCVAHLAPR
Sbjct: 181 HLGLMQGALRDLQAPVTVDRLEPFVEPDLCVAHLAPR 217


>tr|A0QIE3|A0QIE3_MYCA1 Tax_Id=243243 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium avium]
          Length = 234

 Score =  199 bits (507), Expect = 1e-49
 Identities = 107/207 (51%), Positives = 134/207 (64%), Gaps = 3/207 (1%)

Query: 11  GRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPP 70
           GRR A+L++LRASP+P +IAGIAD LGVHPNTVRFHL++L   G+VE V  +  G GRPP
Sbjct: 21  GRRRAVLRLLRASPEPMSIAGIADVLGVHPNTVRFHLDSLVADGQVEHVELDRKGPGRPP 80

Query: 71  VLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVT---TAPHGP 127
           +++RA R+MD  G  +YRLLA IL    A   D        GR+    L       P   
Sbjct: 81  LMFRAVRQMDRGGTRHYRLLAEILAKAFAAETDPAPKALAAGRAWGQQLDAERRRLPRDA 140

Query: 128 STRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQG 187
           +   QA+ +LVD+L ELGF PE       +++ LRHCPF  LAE    V C +HLGLMQG
Sbjct: 141 AGAEQAIAQLVDVLDELGFAPERRVIDGEQQVGLRHCPFLELAENSSNVVCPVHLGLMQG 200

Query: 188 ALRDLQAPVTVDRLEPFVEPDLCVAHL 214
           A+    APV+VDRL+PFVEPDLC+AHL
Sbjct: 201 AMESWGAPVSVDRLDPFVEPDLCLAHL 227


>tr|Q73WD5|Q73WD5_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 234

 Score =  199 bits (506), Expect = 2e-49
 Identities = 107/207 (51%), Positives = 134/207 (64%), Gaps = 3/207 (1%)

Query: 11  GRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPP 70
           GRR A+L++LRASP+P +IAGIAD LGVHPNTVRFHL++L   G+VE V  +  G GRPP
Sbjct: 21  GRRRAVLRLLRASPEPMSIAGIADVLGVHPNTVRFHLDSLVADGQVEHVELDRKGPGRPP 80

Query: 71  VLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVT---TAPHGP 127
           +++RA R+MD  G  +YRLLA IL    A   D        GR+    L       P   
Sbjct: 81  LMFRAVRQMDRGGTRHYRLLAEILAKAFAAETDPAPKALAAGRAWGQQLDAERRRLPRDA 140

Query: 128 STRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQG 187
           +   QA+ +LVD+L ELGF PE       +++ LRHCPF  LAE    V C +HLGLMQG
Sbjct: 141 AGAEQAIAQLVDVLDELGFAPERRVIDGEQQVGLRHCPFLELAENSSNVVCPVHLGLMQG 200

Query: 188 ALRDLQAPVTVDRLEPFVEPDLCVAHL 214
           A+    APV+VDRL+PFVEPDLC+AHL
Sbjct: 201 AMETWGAPVSVDRLDPFVEPDLCLAHL 227


>tr|D5PI80|D5PI80_9MYCO Tax_Id=525368 SubName: Full=Regulatory
           protein;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 226

 Score =  194 bits (494), Expect = 5e-48
 Identities = 104/207 (50%), Positives = 132/207 (63%), Gaps = 3/207 (1%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR  +L+VLR SP P +IA IAD LGVHPNTVRFHL++L   G+VE V  +  G GRPP+
Sbjct: 14  RRREVLRVLRMSPDPMSIAAIADVLGVHPNTVRFHLDSLVGDGQVEHVELDRKGPGRPPL 73

Query: 72  LYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGL---VTTAPHGPS 128
           ++RA R+MD  G  +YRLLA +L    A  PD        GR+    L   +   P G +
Sbjct: 74  MFRAVRQMDRGGTRHYRLLAEVLATAFAAEPDAGAKAVAAGRAWGQKLDSSLEAVPAGTT 133

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
           +  +A+  LV++L ELGF PE       +++ LRHCPF  LAE    V C +HLGLMQGA
Sbjct: 134 SAEEAIDHLVNMLDELGFAPERRTADGEQQVGLRHCPFLELAENRTAVVCPVHLGLMQGA 193

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLA 215
           +    APV+VDRL+ FVEPDLCVAHLA
Sbjct: 194 MDAWGAPVSVDRLDAFVEPDLCVAHLA 220


>tr|A1SCA7|A1SCA7_NOCSJ Tax_Id=196162 SubName: Full=Transcriptional
           regulator;[Nocardioides sp.]
          Length = 215

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/205 (46%), Positives = 131/205 (63%), Gaps = 2/205 (0%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR+A+L  LR+S  P +I  +A +LG+H NTVRFHL+ LA +GRVE+V       GRPP+
Sbjct: 4   RREAVLDALRSSEAPMSILDLAHQLGLHANTVRFHLQVLADSGRVERVEPTRSSPGRPPL 63

Query: 72  LYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLV--TTAPHGPST 129
           ++RA R MDP+GP NY+LLA  L   ++   +      + GR+    L   T +    +T
Sbjct: 64  MFRAHRGMDPAGPRNYQLLADALATRLSADNESTDKAVEAGRAWGHRLAAGTRSTTAVTT 123

Query: 130 RTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGAL 189
             QA  +LV++L ELGF P+     R  +I LRHCPF +L  EH  V C +HLGLMQGA+
Sbjct: 124 DDQATDQLVEMLGELGFSPQRRSSGRRAQIALRHCPFLDLVPEHENVICPVHLGLMQGAM 183

Query: 190 RDLQAPVTVDRLEPFVEPDLCVAHL 214
             + A VT++RLEPF EPDLC+AH+
Sbjct: 184 AAMSAAVTIERLEPFAEPDLCLAHV 208


>tr|Q1B143|Q1B143_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator;[Mycobacterium sp.]
          Length = 212

 Score =  188 bits (477), Expect = 4e-46
 Identities = 109/207 (52%), Positives = 130/207 (62%), Gaps = 5/207 (2%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR  +L VLR +    +IA IA EL VHPNT RFHLEALA  G+VE V  +    GRPP+
Sbjct: 4   RRQDVLAVLREAGTALSIAQIAGELAVHPNTARFHLEALAGTGQVEAVEADRAKPGRPPL 63

Query: 72  LYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           ++RA   MDP+GP +YR LA IL   +AR P+        GRS   G  T  P    +R 
Sbjct: 64  MFRAVAGMDPAGPRDYRTLAGILADALARQPNAARRAVTAGRSW--GEHTAEPTRTRSRR 121

Query: 132 QAVTELVDLLAELGFEPE--PADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGAL 189
           QAV  L DLLA LGF PE  P  G    EI LR+CPF +LA+   +V C +HLGLMQGAL
Sbjct: 122 QAVDRLTDLLAGLGFAPEARPTAG-GIGEIGLRNCPFLDLADTRRDVVCPVHLGLMQGAL 180

Query: 190 RDLQAPVTVDRLEPFVEPDLCVAHLAP 216
              +AP+TV+ L PF EPDLCVAHLAP
Sbjct: 181 SRWKAPITVEALIPFAEPDLCVAHLAP 207


>tr|A3Q8F5|A3Q8F5_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator;[Mycobacterium sp.]
          Length = 212

 Score =  188 bits (477), Expect = 4e-46
 Identities = 109/207 (52%), Positives = 130/207 (62%), Gaps = 5/207 (2%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR  +L VLR +    +IA IA EL VHPNT RFHLEALA  G+VE V  +    GRPP+
Sbjct: 4   RRQDVLAVLREAGTALSIAQIAGELAVHPNTARFHLEALAGTGQVEAVEADRAKPGRPPL 63

Query: 72  LYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           ++RA   MDP+GP +YR LA IL   +AR P+        GRS   G  T  P    +R 
Sbjct: 64  MFRAVAGMDPAGPRDYRTLAGILADALARQPNAARRAVTAGRSW--GEHTAEPTRTRSRR 121

Query: 132 QAVTELVDLLAELGFEPE--PADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGAL 189
           QAV  L DLLA LGF PE  P  G    EI LR+CPF +LA+   +V C +HLGLMQGAL
Sbjct: 122 QAVDRLTDLLAGLGFAPEARPTAG-GIGEIGLRNCPFLDLADTRRDVVCPVHLGLMQGAL 180

Query: 190 RDLQAPVTVDRLEPFVEPDLCVAHLAP 216
              +AP+TV+ L PF EPDLCVAHLAP
Sbjct: 181 SRWKAPITVEALIPFAEPDLCVAHLAP 207


>tr|A1UP07|A1UP07_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator;[Mycobacterium sp.]
          Length = 212

 Score =  188 bits (477), Expect = 4e-46
 Identities = 109/207 (52%), Positives = 130/207 (62%), Gaps = 5/207 (2%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR  +L VLR +    +IA IA EL VHPNT RFHLEALA  G+VE V  +    GRPP+
Sbjct: 4   RRQDVLAVLREAGTALSIAQIAGELAVHPNTARFHLEALAGTGQVEAVEADRAKPGRPPL 63

Query: 72  LYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           ++RA   MDP+GP +YR LA IL   +AR P+        GRS   G  T  P    +R 
Sbjct: 64  MFRAVAGMDPAGPRDYRTLAGILADALARQPNAARRAVTAGRSW--GEHTAEPTRTRSRR 121

Query: 132 QAVTELVDLLAELGFEPE--PADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGAL 189
           QAV  L DLLA LGF PE  P  G    EI LR+CPF +LA+   +V C +HLGLMQGAL
Sbjct: 122 QAVDRLTDLLAGLGFAPEARPTAG-GIGEIGLRNCPFLDLADTRRDVVCPVHLGLMQGAL 180

Query: 190 RDLQAPVTVDRLEPFVEPDLCVAHLAP 216
              +AP+TV+ L PF EPDLCVAHLAP
Sbjct: 181 SRWKAPITVEALIPFAEPDLCVAHLAP 207


>tr|B2HM67|B2HM67_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulator;[Mycobacterium marinum]
          Length = 223

 Score =  187 bits (475), Expect = 8e-46
 Identities = 100/208 (48%), Positives = 131/208 (62%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+VLRA   P +I  IA+ LGVHPNTVRFHL+ L   G+VE+V     G GR
Sbjct: 13  PAGRRRAVLRVLRALGHPLSIVAIAEHLGVHPNTVRFHLDGLVDDGQVERVQPSRRGPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA ++MD  G  +Y+LLA IL+  +A   D        GR+    L   AP    
Sbjct: 73  PPLMFRAVQQMDRGGARHYQLLAEILSNGLAAESDSVDKALAAGRAWGERL--QAPTTAH 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
           +  +++  LV +L  LGF PE       +++ LRHCPF  LAE    V C +HLGLM+GA
Sbjct: 131 SAEKSIDHLVGVLDGLGFAPERRVSDGQQQVALRHCPFLELAENRSGVVCPIHLGLMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L    APVTV+RL+PFVEPDLC+AHL+P
Sbjct: 191 LESWGAPVTVERLDPFVEPDLCLAHLSP 218


>tr|A0PSZ9|A0PSZ9_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulator;[Mycobacterium ulcerans]
          Length = 223

 Score =  187 bits (475), Expect = 8e-46
 Identities = 100/208 (48%), Positives = 131/208 (62%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+VLRA   P +I  IA+ LGVHPNTVRFHL+ L   G+VE+V     G GR
Sbjct: 13  PAGRRRAVLRVLRALGHPLSIVAIAEHLGVHPNTVRFHLDGLVDDGQVERVQPSRRGPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA ++MD  G  +Y+LLA IL+  +A   D        GR+    L   AP    
Sbjct: 73  PPLMFRAVQQMDRGGARHYQLLAEILSNGLAAESDSVDKALAAGRAWGERL--QAPTTAH 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
           +  +++  LV +L  LGF PE       +++ LRHCPF  LAE    V C +HLGLM+GA
Sbjct: 131 SAEKSIDHLVGVLDGLGFAPERRVSDGQQQVALRHCPFLELAENRSGVVCPIHLGLMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L    APVTV+RL+PFVEPDLC+AHL+P
Sbjct: 191 LESWGAPVTVERLDPFVEPDLCLAHLSP 218


>tr|O06191|O06191_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE
           TRANSCRIPTIONAL REGULATORY PROTEIN; SubName:
           Full=Putative uncharacterized protein;[Mycobacterium
           tuberculosis]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|C6DM72|C6DM72_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|A5WQM8|A5WQM8_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|A5U5X2|A5U5X2_MYCTA Tax_Id=419947 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|A1THG3|A1THG3_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator;[Mycobacterium vanbaalenii]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 1/210 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR  +L+ L+A+  P +I  IAD L +HPNTVRFHL+ L   G+VE++  +    GR
Sbjct: 9   PPGRRRDVLRTLKAASGPMSIGAIADALDIHPNTVRFHLDRLVSQGQVERIEPDRRRPGR 68

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGP- 127
           PP ++RA  +MD +GP +YRLLA +L   +A   D        GR+    L   AP    
Sbjct: 69  PPQMFRAMPQMDRAGPRHYRLLAEMLAMSLAADGDPPTRAQAGGRAWGRELNVRAPRRKQ 128

Query: 128 STRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQG 187
           S   +AV  LV++L ++GF PE       ++I LRHCPF  LAE    V C +HLGLMQG
Sbjct: 129 SGAEEAVDRLVEVLDDVGFVPERLGAGEKQQIGLRHCPFLELAETQSRVVCGIHLGLMQG 188

Query: 188 ALRDLQAPVTVDRLEPFVEPDLCVAHLAPR 217
            L    APVTVDRLEPF +PDLC+AHL  R
Sbjct: 189 VLERQGAPVTVDRLEPFAQPDLCLAHLTLR 218


>tr|D6G3R0|D6G3R0_MYCTU Tax_Id=478435 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis KZN 605]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D6FMR2|D6FMR2_MYCTU Tax_Id=611304 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis K85]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D6FJJ1|D6FJJ1_MYCTU Tax_Id=611303 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis CPHL_A]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D6F786|D6F786_MYCTU Tax_Id=611302 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis T46]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D5ZJE4|D5ZJE4_MYCTU Tax_Id=537210 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis T17]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D5YV38|D5YV38_MYCTU Tax_Id=515616 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis 02_1987]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRVMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D5YKL8|D5YKL8_MYCTU Tax_Id=520140 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium tuberculosis EAS054]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D5Y6P4|D5Y6P4_MYCTU Tax_Id=520141 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium tuberculosis T85]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRVMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|D5XWS3|D5XWS3_MYCTU Tax_Id=515617 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis T92]
          Length = 224

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|A2VKX3|A2VKX3_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 253

 Score =  180 bits (457), Expect = 9e-44
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|A4KJR2|A4KJR2_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 224

 Score =  178 bits (451), Expect = 5e-43
 Identities = 98/208 (47%), Positives = 125/208 (60%), Gaps = 2/208 (0%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+G 
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGD 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQTWGAPVTVDRLDAFVEPDLCLAHFTP 218


>tr|Q7TY77|Q7TY77_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE
           TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis]
          Length = 223

 Score =  176 bits (447), Expect = 1e-42
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 3/208 (1%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQ-TWAPVTVDRLDAFVEPDLCLAHFTP 217


>tr|C1AF94|C1AF94_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 223

 Score =  176 bits (447), Expect = 1e-42
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 3/208 (1%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQ-TWAPVTVDRLDAFVEPDLCLAHFTP 217


>tr|A1KLX3|A1KLX3_MYCBP Tax_Id=410289 SubName: Full=Possible
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 223

 Score =  176 bits (447), Expect = 1e-42
 Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 3/208 (1%)

Query: 9   PRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGR 68
           P GRR A+L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GR
Sbjct: 13  PVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGR 72

Query: 69  PPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPS 128
           PP+++RA RR D +G   YRLLA IL   +A   D        GR+   G    AP   +
Sbjct: 73  PPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGA 130

Query: 129 TRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
              + +  LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GA
Sbjct: 131 DTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGA 190

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L+   APVTVDRL+ FVEPDLC+AH  P
Sbjct: 191 LQ-TWAPVTVDRLDAFVEPDLCLAHFTP 217


>tr|D5Z6F2|D5Z6F2_MYCTU Tax_Id=537209 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis GM 1503]
          Length = 221

 Score =  172 bits (435), Expect = 3e-41
 Identities = 94/201 (46%), Positives = 121/201 (60%), Gaps = 2/201 (0%)

Query: 16  ILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPVLYRA 75
           +L+ L AS  P +IA IA +LGVHPNTVRFHL+ L   G+VE+V       GRPP+++RA
Sbjct: 17  VLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGRPPLMFRA 76

Query: 76  SRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRTQAVT 135
            RR D +G   YRLLA IL   +A   D        GR+   G    AP   +   + + 
Sbjct: 77  VRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAW--GRQLEAPPAGADTEETID 134

Query: 136 ELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGALRDLQAP 195
            LV +L +LGF PE       +++ LRHCPF  LAE    V C +HLG+M+GAL+   AP
Sbjct: 135 HLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVCPVHLGIMRGALQTWGAP 194

Query: 196 VTVDRLEPFVEPDLCVAHLAP 216
           VTVDRL+ FVEPDLC+AH  P
Sbjct: 195 VTVDRLDAFVEPDLCLAHFTP 215


>tr|A1SII0|A1SII0_NOCSJ Tax_Id=196162 SubName: Full=Transcriptional
           regulator;[Nocardioides sp.]
          Length = 225

 Score =  169 bits (429), Expect = 2e-40
 Identities = 92/218 (42%), Positives = 128/218 (58%), Gaps = 5/218 (2%)

Query: 2   DTDTSLPPRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVG 61
           D    LP R RR  +L +LR + QP ++A +A+ +G+H NT RFHL+ L   G  E+   
Sbjct: 8   DQPAQLPARVRRTEVLSMLRQADQPLSVAEVAEAMGLHVNTARFHLDGLVEDGLAERTTE 67

Query: 62  EAFGRGRPPVLYRASRRMDPS-GPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLV 120
                GRP +LY +     PS GP +Y LLA +LTG+V+   D      +LG++    L+
Sbjct: 68  PRETPGRPRILYASD---GPSLGPRSYELLAEMLTGFVSSLQDTGSGTVELGKAWGRHLI 124

Query: 121 T-TAPHGPSTRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCA 179
             +AP      ++AV  L  +L  +GF+PE        E+RL  CPF+ +AE+H +V CA
Sbjct: 125 ERSAPSERVDTSEAVVRLDRMLDAIGFQPESETTDAGAEVRLHRCPFREVAEKHTDVVCA 184

Query: 180 LHLGLMQGALRDLQAPVTVDRLEPFVEPDLCVAHLAPR 217
           +HLGLMQGAL ++ APVT   L+PFV P LCVA L PR
Sbjct: 185 IHLGLMQGALEEIDAPVTATSLQPFVTPHLCVARLEPR 222


>tr|C7MRY4|C7MRY4_SACVD Tax_Id=471857 SubName: Full=Predicted
           transcriptional regulator;[Saccharomonospora viridis]
          Length = 227

 Score =  155 bits (393), Expect = 2e-36
 Identities = 89/213 (41%), Positives = 119/213 (55%), Gaps = 3/213 (1%)

Query: 4   DTSLPPRGR-RDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGE 62
           + S P  GR R  +L++LR +  P     +A  +G H NT RFHL+AL  AG  ++    
Sbjct: 9   EASGPALGRSRTRVLELLRTTDGPLTAHQVAQRVGFHVNTARFHLDALVEAGLAQRGTEG 68

Query: 63  AFGRGRPPVLYRASRRMDPSGPTNYRLLASILTGYVAR-HPDXXXXXXDLGRSTSPGLVT 121
           A   GRP ++YRA       GP +YRLLA++L+  + R  P+        GR     L  
Sbjct: 69  AGRPGRPRMVYRAVAHRASEGPRSYRLLATMLSTLIDRVMPEPREAAIAAGREWGRYLAK 128

Query: 122 T-APHGPSTRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCAL 180
             AP       + +  + ++LAE GF P    G   R + LRHCPFQ +A  HG+V C+L
Sbjct: 129 RPAPFEHVDAEEGIRRVANVLAEAGFAPGEVSGAGPRVLPLRHCPFQEVARVHGDVVCSL 188

Query: 181 HLGLMQGALRDLQAPVTVDRLEPFVEPDLCVAH 213
           HLGLMQG L ++ APVT  RLEPFVEP LC+AH
Sbjct: 189 HLGLMQGVLAEVGAPVTARRLEPFVEPSLCLAH 221


>tr|Q0RZI1|Q0RZI1_RHOSR Tax_Id=101510 SubName: Full=Possible
           transcriptional regulator, MarR family
           protein;[Rhodococcus sp.]
          Length = 227

 Score =  154 bits (390), Expect = 5e-36
 Identities = 87/208 (41%), Positives = 121/208 (58%), Gaps = 6/208 (2%)

Query: 13  RDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPVL 72
           R+ +L +L A+ +P  +  IAD + +HPNT RFHL+ L  AG  E+   ++   GRP ++
Sbjct: 19  RNRVLDLLCAAAEPMGVQDIADRVDLHPNTARFHLDGLVDAGLAERRAEDSRRPGRPRMV 78

Query: 73  YRASRRMDPSGPTNYRLLASILTGYVARH-PDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           Y A+     +G  +YRLLA +LTG +A   P+        G +   G        PS R 
Sbjct: 79  YAATPSDASTGQRSYRLLAEMLTGLIADTLPEPGRAAETAGEAW--GRYLAERPAPSQRV 136

Query: 132 QA---VTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
            A   V  L  +LAE GF P   +      I LRHCPF+ +AE H +V C+LHLGL++GA
Sbjct: 137 DAADGVRRLSTVLAESGFAPGVVENLDRPVIPLRHCPFREVAERHRDVVCSLHLGLIRGA 196

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L +++AP+  DRLEPFVEP LC+AHL P
Sbjct: 197 LAEVRAPLAADRLEPFVEPSLCLAHLIP 224


>tr|C1AS60|C1AS60_RHOOB Tax_Id=632772 SubName: Full=Putative SufR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 230

 Score =  148 bits (373), Expect = 5e-34
 Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 6/208 (2%)

Query: 13  RDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPVL 72
           R+ +L++L  + +P  +  IA+ + +HPNT RFHL+ L   G  E+   +    GRP ++
Sbjct: 19  RNRVLELLCVAAEPMGVQDIAERVDLHPNTARFHLDGLVDTGLAERRAEDRRRPGRPRMV 78

Query: 73  YRASRRMDPSGPTNYRLLASILTGYVARH-PDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           Y A+     +G  +YRLLA +LTG +    P+        G +   G        PS R 
Sbjct: 79  YAATTSDASTGRRSYRLLAEMLTGLIGDTLPEPGQAAETAGEAW--GRYLAERPAPSQRV 136

Query: 132 QA---VTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGA 188
            A   V  L  +LAE GF P   D      I LRHCPF+ +AE H +V C+LHLGL++GA
Sbjct: 137 DAADGVRRLSTVLAESGFAPGVVDDLTRPVIPLRHCPFREVAERHRDVVCSLHLGLIRGA 196

Query: 189 LRDLQAPVTVDRLEPFVEPDLCVAHLAP 216
           L +++AP+  DRLEPFVEP LC+A+L P
Sbjct: 197 LAEVRAPLAADRLEPFVEPSLCLAYLTP 224


>tr|C8XFI6|C8XFI6_NAKMY Tax_Id=479431 SubName: Full=Putative
           transcriptional regulator;[Nakamurella multipartita]
          Length = 242

 Score =  143 bits (361), Expect = 1e-32
 Identities = 86/220 (39%), Positives = 121/220 (55%), Gaps = 7/220 (3%)

Query: 2   DTDTSLPPRGRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVG 61
           DT T       R  +L++LR S  P  +  +A+  G+H  TVRFHL+ L +AG+V     
Sbjct: 11  DTPTDPTASKPRRRLLKLLRRSTIPLDVYQLAEATGLHITTVRFHLDVLVKAGQVSAQKT 70

Query: 62  EAFGRGRPPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXD-LGRSTSPGLV 120
                GRP  +Y A     P  P  YR LA++L   +   P       +  GR  +  L+
Sbjct: 71  PRTTPGRPRTVYAAHAEESP--PDGYRPLAALLAANLGPTPRTRRRRAEKAGRDWATSLI 128

Query: 121 TTAPHGPSTRTQAVTELVDLLAELGFEPE---PADGRRAREIRLRHCPFQNLAEEHGEVT 177
            T     +T  +A   +VDL AE+ F+PE   PA     REIRLR CP++++A EH +V 
Sbjct: 129 PTVDD-VATPDEAAHRIVDLFAEMNFDPELVHPASATGEREIRLRACPYRDVAREHPDVV 187

Query: 178 CALHLGLMQGALRDLQAPVTVDRLEPFVEPDLCVAHLAPR 217
           CA+HLGL++GAL  L  P+T  RL PFV+P LC+A+L P+
Sbjct: 188 CAIHLGLLEGALTQLGKPLTTVRLVPFVKPHLCLAYLTPQ 227


>tr|A0LS64|A0LS64_ACIC1 Tax_Id=351607 SubName: Full=Transcriptional
           regulator; Flags: Precursor;[Acidothermus
           cellulolyticus]
          Length = 255

 Score =  137 bits (346), Expect = 7e-31
 Identities = 89/213 (41%), Positives = 113/213 (53%), Gaps = 6/213 (2%)

Query: 6   SLPPR---GRRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGE 62
           S PP     RR AIL  LRA+ +P +I  IA+  GVH NT RFHL+ L   G V +    
Sbjct: 8   SAPPAVDSARRAAILDHLRAADRPLSITEIAEATGVHANTARFHLDRLVDEGLVSRSAEP 67

Query: 63  AFGRGRPPVLYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTT 122
               GRP +LY A+   DP GP +Y LLA +LTG VA            GR     LV  
Sbjct: 68  RDTPGRPRILYAATAT-DP-GPRSYALLAEMLTGLVASIEKSTDGARKTGRQWGQHLVER 125

Query: 123 -APHGPSTRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALH 181
            AP    +  +AV  +  +L  +GF PE        E  LRHCPF+ +A  H ++ CALH
Sbjct: 126 PAPSEQISTDEAVRRVNAVLDAIGFRPEMRKLDGETEFLLRHCPFREVALRHTDIVCALH 185

Query: 182 LGLMQGALRDLQAPVTVDRLEPFVEPDLCVAHL 214
            GL++GA+ +L AP+ V  L PFV P LC A L
Sbjct: 186 RGLIEGAVGELHAPLEVMDLRPFVTPTLCTARL 218


>tr|C1AS79|C1AS79_RHOOB Tax_Id=632772 SubName: Full=Putative SufR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 229

 Score =  137 bits (344), Expect = 1e-30
 Identities = 85/208 (40%), Positives = 111/208 (53%), Gaps = 2/208 (0%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR  +L  LRASP P AI  +A    +H  TVRFHL+AL  AG V         RGRP  
Sbjct: 22  RRVQLLDALRASPTPMAIGELAALCELHVTTVRFHLDALTSAGLVSAEPERNPARGRPRR 81

Query: 72  LYRASRRMDPS-GPTNYRLLASILTGYVARHPDXXXXXXDL-GRSTSPGLVTTAPHGPST 129
           LYRA   ++P    + Y+ LA +L  + A   D      +  GR+ +   +T  P  P +
Sbjct: 82  LYRALAPLEPGHADSGYQRLARVLAAHWASSEDDPVARAEAAGRAWARDDLTETPGSPRS 141

Query: 130 RTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGAL 189
              A + L  L AE+GF+PE         IRL  CPF+++A +   V CALHLGLM+G L
Sbjct: 142 IEDAASTLTTLFAEMGFDPELEASEDEMRIRLHACPFESVARQSPNVVCALHLGLMRGVL 201

Query: 190 RDLQAPVTVDRLEPFVEPDLCVAHLAPR 217
             L AP + +RL P+  P  CVAHLA R
Sbjct: 202 DRLGAPESDNRLIPWETPRTCVAHLARR 229


>tr|Q0RZF9|Q0RZF9_RHOSR Tax_Id=101510 SubName: Full=Possible
           transcriptional regulator, ArsR family
           protein;[Rhodococcus sp.]
          Length = 229

 Score =  131 bits (329), Expect = 6e-29
 Identities = 82/208 (39%), Positives = 109/208 (52%), Gaps = 2/208 (0%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR  +L  LRASP P  +  +A    +H  TVRFHL+AL  AG V         RGRP  
Sbjct: 22  RRVQLLDALRASPTPMTVGELAALCELHVTTVRFHLDALTGAGLVSAEPERNPARGRPRR 81

Query: 72  LYRASRRMDPS-GPTNYRLLASILTGYVARHPDXXXXXXDL-GRSTSPGLVTTAPHGPST 129
           LYRA   ++P    + Y+ LA +L  + A   D      +  GR+ +   +T     P +
Sbjct: 82  LYRALAPLEPGHADSGYQGLARVLAAHWASSEDDPVGRAEAAGRAWALDDLTGTSGAPRS 141

Query: 130 RTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGAL 189
              A + L  L AE+GF+PE         IRL  CPF+++A +   V CALHLGLM+G L
Sbjct: 142 IEDAASTLTTLFAEMGFDPELESEPEEMRIRLHACPFESVARQSPNVVCALHLGLMRGVL 201

Query: 190 RDLQAPVTVDRLEPFVEPDLCVAHLAPR 217
             L AP T +RL P+  P  C+AHLA R
Sbjct: 202 DRLGAPETDNRLIPWETPRTCIAHLARR 229


>tr|Q47L46|Q47L46_THEFY Tax_Id=269800 SubName: Full=Transcriptional
           regulator; Flags: Precursor;[Thermobifida fusca]
          Length = 224

 Score =  130 bits (326), Expect = 1e-28
 Identities = 82/207 (39%), Positives = 105/207 (50%), Gaps = 7/207 (3%)

Query: 13  RDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPVL 72
           R A+ + LR +P P  +  +A  +G+H NTVR HL  LA  G V     E    GRP +L
Sbjct: 19  RVAVWEALRRAPGPLTVQDLAQRVGLHANTVRGHLAILAERGYVTSAPEERDQPGRPRLL 78

Query: 73  YRASRRMDPSGPTNYRLLASILTGYVARHP-DXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           Y A    + +   NYRLLA +L  Y+A    D      D GRS    +V     G     
Sbjct: 79  YSAVTD-ETAALRNYRLLAEMLVDYLAETAADHAAAAIDAGRSYGRRMVHAPQAGERVDA 137

Query: 132 Q-AVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGALR 190
             A+  +  LL + GF P     R A  I L  CPF+ LAE   ++ C +HLG+M+G L 
Sbjct: 138 DTAIRAVATLLDQAGFRPR----RSAAGIDLHRCPFRELAESAPDIVCGIHLGMMRGVLA 193

Query: 191 DLQAPVTVDRLEPFVEPDLCVAHLAPR 217
           +L APV   RL PF EPD CVA L PR
Sbjct: 194 ELGAPVEAVRLRPFAEPDRCVAELRPR 220


>tr|A1SPR7|A1SPR7_NOCSJ Tax_Id=196162 SubName: Full=Transcriptional
           regulator;[Nocardioides sp.]
          Length = 261

 Score =  129 bits (325), Expect = 2e-28
 Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 11/223 (4%)

Query: 3   TDTSLPPRG---------RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARA 53
           T+T  PPR           R  +L +L+ + +P   + +   LG+H N+ RFHL+ALA  
Sbjct: 33  TNTDDPPRSDDPAHGLGPTRARVLALLQDAGEPMTASAVGARLGLHVNSARFHLDALAED 92

Query: 54  GRVEQVVGEAFGRGRPPVLYRASRRMDPSGPTNYRLLASILTGYVA-RHPDXXXXXXDLG 112
             V +   +    GRP VLY  ++        +YRLLA ILT  +A R P+      + G
Sbjct: 93  ALVVREREDRSTPGRPKVLYTVAQAAPAVTHRSYRLLAEILTSILAGRLPEPSAAAEEAG 152

Query: 113 RSTSPGLVTTAP-HGPSTRTQAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAE 171
            +    L   AP +  + R++++  LVD L  +GF+    D      + + HCPF  +AE
Sbjct: 153 VAWGRYLAPAAPPYQRADRSESLVRLVDTLDRIGFDSHVVDEPGDLRLEVSHCPFLEVAE 212

Query: 172 EHGEVTCALHLGLMQGALRDLQAPVTVDRLEPFVEPDLCVAHL 214
           +H +V CA+HLGLM+G L    A V    LEP VEP  C+AHL
Sbjct: 213 QHHDVVCAVHLGLMRGILEQTGATVRATGLEPLVEPSRCIAHL 255


>tr|A8LYJ6|A8LYJ6_SALAI Tax_Id=391037 SubName: Full=Putative
           transcriptional regulator;[Salinispora arenicola]
          Length = 218

 Score =  118 bits (295), Expect = 6e-25
 Identities = 75/206 (36%), Positives = 99/206 (48%), Gaps = 1/206 (0%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR A+ QVL  +        +ADE+G    T R HLE L  A   E+V G   GRGRPP+
Sbjct: 9   RRTALRQVLHRATGAMTAQQVADEVGWPVETTRLHLEELVGAQLAERVPGAPRGRGRPPM 68

Query: 72  LYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
            YRA+  MD +GPT YRLLA +L   +   P+      D G++ +    T A  G +  T
Sbjct: 69  TYRATIGMDTTGPTQYRLLAGLLARTLRDRPNGRALARDAGQAWAFEHPTDAVDG-APLT 127

Query: 132 QAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGALRD 191
           +A T L        F P     R   +I L HCPF +L  ++G+V C+LH G++ G  R 
Sbjct: 128 RATTALTSRFGAHEFAPTATRTRDRADITLWHCPFLDLIADYGDVICSLHDGMVDGITRV 187

Query: 192 LQAPVTVDRLEPFVEPDLCVAHLAPR 217
                    L  F  PD C   L  R
Sbjct: 188 AAGTSVTAHLTAFPRPDSCRITLTRR 213


>tr|A4X1H1|A4X1H1_SALTO Tax_Id=369723 SubName: Full=Putative
           transcriptional regulator;[Salinispora tropica]
          Length = 218

 Score =  115 bits (288), Expect = 4e-24
 Identities = 72/206 (34%), Positives = 97/206 (47%), Gaps = 1/206 (0%)

Query: 12  RRDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPV 71
           RR  + Q L  +        +AD++G    T R HLE L  A   E+V G   GRGRPP+
Sbjct: 9   RRTTLRQALHRATGAMTAQQVADDVGWPVETTRLHLEELVGAQLAERVPGAPRGRGRPPM 68

Query: 72  LYRASRRMDPSGPTNYRLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
            YRA+  MD +GPT YRLLA +L   +   P+      D GR+ +    T A  G +  +
Sbjct: 69  TYRATVGMDTAGPTQYRLLAGLLARTLREQPNGRALARDAGRAWASEQPTEAIDG-APLS 127

Query: 132 QAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGALRD 191
           +A T L        F P         +I L HCPF +L  +HG+V C+LH G++ G  R 
Sbjct: 128 RAATALTSRFEAHEFAPTSTVTGDRADITLWHCPFLDLIADHGDVICSLHDGMVDGITRA 187

Query: 192 LQAPVTVDRLEPFVEPDLCVAHLAPR 217
                   +L  F  PD C   L  R
Sbjct: 188 AAGTSVTAQLTAFPRPDSCRITLTRR 213


>tr|A1SNU3|A1SNU3_NOCSJ Tax_Id=196162 SubName: Full=Transcriptional
           regulator;[Nocardioides sp.]
          Length = 231

 Score =  114 bits (285), Expect = 8e-24
 Identities = 77/206 (37%), Positives = 98/206 (47%), Gaps = 5/206 (2%)

Query: 13  RDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPVL 72
           R A+LQ+L   P+   +A +A   G+HPNTVR HLEAL   G V +V  E  GRGRP   
Sbjct: 28  RAAVLQLLLDQPEAPRLAALAQASGLHPNTVREHLEALVADGWVRRVRSEPQGRGRPAWR 87

Query: 73  YRASRRMDPSGPTNYRLLASILTGYVA-RHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           Y++   ++  G   Y  LA+ L   +A   P         G      L       P T  
Sbjct: 88  YQS---VEERGRDEYAGLATALAASIASTSPAPTETARFAGEHWGRDLAAERDRRPETPE 144

Query: 132 QAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGALRD 191
            A  E+V +L ELGFEPE AD  R   +RL  CP    A  +  V C +H GL+ GAL  
Sbjct: 145 DARDEVVTMLDELGFEPE-ADAERDDVVRLTRCPLLEAAHRYPGVVCEVHRGLVSGALAT 203

Query: 192 LQAPVTVDRLEPFVEPDLCVAHLAPR 217
             A      L PF EP  C+  + PR
Sbjct: 204 YGADPEGTDLIPFAEPGACLLMVPPR 229


>tr|D1VPH4|D1VPH4_9ACTO Tax_Id=298654 SubName: Full=Putative
           transcriptional regulator;[Frankia sp. EuI1c]
          Length = 266

 Score =  107 bits (266), Expect = 1e-21
 Identities = 75/208 (36%), Positives = 101/208 (48%), Gaps = 11/208 (5%)

Query: 16  ILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPVLYRA 75
           +L++LRA+P P     +A E G+  +TVRFHL+ LA AG V          GRP V Y +
Sbjct: 48  LLRLLRAAPGPLDAHQLAQESGLAVSTVRFHLDRLAAAGLVVSEPRPRSTPGRPRVTYTS 107

Query: 76  SRRMDPSGPTNYRLLASILTGYVARHP-DXXXXXXDLGRSTSPGLVTT------APHGPS 128
           +   D  G   Y  LA  L   +A    D        GR+ +    +        P G  
Sbjct: 108 TSPGDDRGA--YEQLAGALAANLADSAADKAARAERAGRAWADERYSARSRDVDGPPGRE 165

Query: 129 TRT--QAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQ 186
            R     + E++ L  E+GF+PE       + + L  CPF  +A+ H +V C LHLGL++
Sbjct: 166 LRALGDVLQEVMALFTEVGFDPELDGEPGGQRLLLHACPFLGVAKAHPDVVCTLHLGLLR 225

Query: 187 GALRDLQAPVTVDRLEPFVEPDLCVAHL 214
           G L  L AP    RL PF EP LCVAHL
Sbjct: 226 GTLEHLGAPPLDTRLVPFAEPGLCVAHL 253


>tr|A1SGC3|A1SGC3_NOCSJ Tax_Id=196162 SubName: Full=Transcriptional
           regulator;[Nocardioides sp.]
          Length = 229

 Score =  102 bits (255), Expect = 2e-20
 Identities = 68/199 (34%), Positives = 90/199 (45%), Gaps = 7/199 (3%)

Query: 13  RDAILQVLRASPQPRAIAGIADELGVHPNTVRFHLEALARAGRVEQVVGEAFGRGRPPVL 72
           R AIL+ L   PQP  +A +A   G+HPNTVR HL+AL R G V ++ G   GRGRP  L
Sbjct: 30  RRAILEHLHGQPQPLTLAALARITGLHPNTVREHLDALVRRGLVRRLAGRPQGRGRPAYL 89

Query: 73  YRASRRMDPSGPTNY-RLLASILTGYVARHPDXXXXXXDLGRSTSPGLVTTAPHGPSTRT 131
           +         GP  Y RL  ++     +   D       +G      L            
Sbjct: 90  FEHVEH----GPGEYARLAVALADALASSSSDPAGHAAAVGVEWGRELARERRARTGAGE 145

Query: 132 QAVTELVDLLAELGFEPEPADGRRAREIRLRHCPFQNLAEEHGEVTCALHLGLMQGALRD 191
            A +E+V  L +LGFEP    G    E+ L  CP    A     V C +HLG+++G L +
Sbjct: 146 DARSEVVGQLDDLGFEPR--RGADDCEVLLTRCPLLEAAHRAPAVVCGIHLGIIRGMLDE 203

Query: 192 LQAPVTVDRLEPFVEPDLC 210
             A  +   LEPF  P  C
Sbjct: 204 FGADPSGSELEPFAAPGYC 222


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.321    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,810,336,074
Number of extensions: 71933213
Number of successful extensions: 171463
Number of sequences better than 10.0: 421
Number of HSP's gapped: 172836
Number of HSP's successfully gapped: 422
Length of query: 217
Length of database: 4,236,830,644
Length adjustment: 132
Effective length of query: 85
Effective length of database: 2,585,792,596
Effective search space: 219792370660
Effective search space used: 219792370660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)