BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_1327
         (1083 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QS29|A0QS29_MYCS2 Tax_Id=246196 (recB)SubName: Full=Exodeox...  1898   0.0  
tr|Q9RPH6|Q9RPH6_MYCSM Tax_Id=1772 (recB)SubName: Full=RecB;[Myc...  1898   0.0  
tr|B1MFU8|B1MFU8_MYCA9 Tax_Id=561007 SubName: Full=Exodeoxyribon...  1478   0.0  
tr|D5PC41|D5PC41_9MYCO Tax_Id=525368 (recB)SubName: Full=Exodeox...  1342   0.0  
tr|A0QL86|A0QL86_MYCA1 Tax_Id=243243 (recB)SubName: Full=Exodeox...  1339   0.0  
tr|A3PUY8|A3PUY8_MYCSJ Tax_Id=164757 SubName: Full=Exodeoxyribon...  1338   0.0  
tr|A1T4E4|A1T4E4_MYCVP Tax_Id=350058 SubName: Full=DNA helicase/...  1337   0.0  
tr|Q1BDL8|Q1BDL8_MYCSS Tax_Id=164756 SubName: Full=DNA helicase/...  1337   0.0  
tr|A1UBC3|A1UBC3_MYCSK Tax_Id=189918 SubName: Full=DNA helicase/...  1337   0.0  
tr|B2HSF6|B2HSF6_MYCMM Tax_Id=216594 (recB)SubName: Full=Exodeox...  1329   0.0  
tr|A0PLZ3|A0PLZ3_MYCUA Tax_Id=362242 (recB)SubName: Full=Exodeox...  1320   0.0  
tr|A4T1L3|A4T1L3_MYCGI Tax_Id=350054 SubName: Full=DNA helicase/...  1272   0.0  
tr|D5YNS9|D5YNS9_MYCTU Tax_Id=515616 SubName: Full=Exonuclease s...  1197   0.0  
sp|P96920|EX5B_MYCTU Tax_Id=1773 (recB)RecName: Full=Exodeoxyrib...  1196   0.0  
tr|C6DU07|C6DU07_MYCTK Tax_Id=478434 SubName: Full=Exonuclease s...  1196   0.0  
tr|A5WJZ5|A5WJZ5_MYCTF Tax_Id=336982 SubName: Full=Exonuclease V...  1196   0.0  
tr|A5U013|A5U013_MYCTA Tax_Id=419947 (recB)SubName: Full=Exodeox...  1196   0.0  
tr|D6FZS7|D6FZS7_MYCTU Tax_Id=478435 SubName: Full=Exonuclease s...  1196   0.0  
tr|D5Y0V3|D5Y0V3_MYCTU Tax_Id=520141 SubName: Full=Exonuclease s...  1196   0.0  
tr|D6FME1|D6FME1_MYCTU Tax_Id=611304 SubName: Full=Exonuclease s...  1194   0.0  
tr|D6FED6|D6FED6_MYCTU Tax_Id=611303 SubName: Full=Exonuclease s...  1194   0.0  
tr|D6F1P0|D6F1P0_MYCTU Tax_Id=611302 SubName: Full=Exodeoxyribon...  1192   0.0  
tr|D5YCX1|D5YCX1_MYCTU Tax_Id=520140 SubName: Full=Exonuclease s...  1192   0.0  
tr|D2PR47|D2PR47_KRIFD Tax_Id=479435 SubName: Full=Exodeoxyribon...  1178   0.0  
tr|Q7U1L0|Q7U1L0_MYCBO Tax_Id=1765 (recBa)SubName: Full=PROBABLE...   941   0.0  
tr|C1AKW1|C1AKW1_MYCBT Tax_Id=561275 (recBa)SubName: Full=Putati...   939   0.0  
tr|A1KGA8|A1KGA8_MYCBP Tax_Id=410289 (recBa)SubName: Full=Probab...   939   0.0  
tr|A1SDB2|A1SDB2_NOCSJ Tax_Id=196162 SubName: Full=Exodeoxyribon...   894   0.0  
tr|C8XGW9|C8XGW9_NAKMY Tax_Id=479431 SubName: Full=Exodeoxyribon...   850   0.0  
tr|D5XQQ7|D5XQQ7_MYCTU Tax_Id=515617 SubName: Full=Exonuclease V...   841   0.0  
tr|D5ZD19|D5ZD19_MYCTU Tax_Id=537210 SubName: Full=Exonuclease s...   752   0.0  
tr|C0ZQ88|C0ZQ88_RHOE4 Tax_Id=234621 (recB)SubName: Full=Exodeox...   735   0.0  
tr|A6W6P2|A6W6P2_KINRD Tax_Id=266940 SubName: Full=Exodeoxyribon...   732   0.0  
tr|C3JUW9|C3JUW9_RHOER Tax_Id=596309 (recB)SubName: Full=Exodeox...   728   0.0  
tr|Q73SI1|Q73SI1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   724   0.0  
tr|Q0SFN8|Q0SFN8_RHOSR Tax_Id=101510 SubName: Full=Exodeoxyribon...   715   0.0  
tr|C1AXR2|C1AXR2_RHOOB Tax_Id=632772 (recB)SubName: Full=Exodeox...   713   0.0  
tr|D5PVV9|D5PVV9_COREQ Tax_Id=525370 (recB)SubName: Full=Exodeox...   713   0.0  
tr|D5UHJ8|D5UHJ8_9CELL Tax_Id=446466 SubName: Full=Exodeoxyribon...   707   0.0  
tr|Q5YWP8|Q5YWP8_NOCFA Tax_Id=37329 (recB)SubName: Full=Putative...   683   0.0  
tr|D5UQD2|D5UQD2_TSUPA Tax_Id=521096 SubName: Full=Exodeoxyribon...   623   e-176
tr|D5Z0L0|D5Z0L0_MYCTU Tax_Id=537209 SubName: Full=Exodeoxyribon...   616   e-174
tr|D3FF74|D3FF74_CONWI Tax_Id=469383 SubName: Full=Exodeoxyribon...   597   e-168
tr|D0L8X3|D0L8X3_GORB4 Tax_Id=526226 SubName: Full=Exodeoxyribon...   565   e-158
tr|Q73SI0|Q73SI0_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   473   e-131

>tr|A0QS29|A0QS29_MYCS2 Tax_Id=246196 (recB)SubName:
            Full=Exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Mycobacterium smegmatis]
          Length = 1083

 Score = 1898 bits (4916), Expect = 0.0
 Identities = 973/1083 (89%), Positives = 973/1083 (89%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ
Sbjct: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVKTDQQXXXXXXXXXXXXXXXXTIATTHQ 120
            ELRERVRAQIVAALVALDDPSRACNDLEEYLVKTDQQ                TIATTHQ
Sbjct: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVKTDQQARRRRLRDALAGFDAATIATTHQ 120

Query: 121  FCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLAR 180
            FCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLAR
Sbjct: 121  FCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLAR 180

Query: 181  VVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALEP 240
            VVVGNPATQL        SPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALEP
Sbjct: 181  VVVGNPATQLRPRDPDPDSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALEP 240

Query: 241  EDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGDI 300
            EDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGDI
Sbjct: 241  EDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGDI 300

Query: 301  ATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLVG 360
            ATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLVG
Sbjct: 301  ATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLVG 360

Query: 361  APRNDPFRLRVVSRKPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQAKDIA 420
            APRNDPFRLRVVSRKPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQAKDIA
Sbjct: 361  APRNDPFRLRVVSRKPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQAKDIA 420

Query: 421  VITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLVRAAA 480
            VITETHKD               VYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLVRAAA
Sbjct: 421  VITETHKDARACHAALLAAGIPAVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLVRAAA 480

Query: 481  ATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVLSWQG 540
            ATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVLSWQG
Sbjct: 481  ATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVLSWQG 540

Query: 541  GERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDAAAVQIM 600
            GERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQ             LDSDAAAVQIM
Sbjct: 541  GERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQRSERGGESERNRRLDSDAAAVQIM 600

Query: 601  TVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHVXXXXXXXXXXXXXXXXXXX 660
            TVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV                   
Sbjct: 601  TVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHVGGADPAVARAGRAEAAGDD 660

Query: 661  XXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPKISDEDALE 720
              LTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPKISDEDALE
Sbjct: 661  SRLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPKISDEDALE 720

Query: 721  RLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRTSYSGLLRAAET 780
            RLRAWEAAGGPVIEESVIG            DLAARKFFRAIDMAWKRTSYSGLLRAAET
Sbjct: 721  RLRAWEAAGGPVIEESVIGAVSPVPPEPAPEDLAARKFFRAIDMAWKRTSYSGLLRAAET 780

Query: 781  AGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLVHAVLETADPFA 840
            AGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLVHAVLETADPFA
Sbjct: 781  AGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLVHAVLETADPFA 840

Query: 841  EDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCEL 900
            EDLTAELATHIDAHSQHWP             PMHD            RQIGLRDRLCEL
Sbjct: 841  EDLTAELATHIDAHSQHWPVEVETAELAAALVPMHDTPLGPLAPGLTLRQIGLRDRLCEL 900

Query: 901  DFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGS 960
            DFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGS
Sbjct: 901  DFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGS 960

Query: 961  VDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHR 1020
            VDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHR
Sbjct: 961  VDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHR 1020

Query: 1021 YLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDA 1080
            YLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDA
Sbjct: 1021 YLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDA 1080

Query: 1081 EAP 1083
            EAP
Sbjct: 1081 EAP 1083


>tr|Q9RPH6|Q9RPH6_MYCSM Tax_Id=1772 (recB)SubName:
            Full=RecB;[Mycobacterium smegmatis]
          Length = 1083

 Score = 1898 bits (4916), Expect = 0.0
 Identities = 973/1083 (89%), Positives = 973/1083 (89%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ
Sbjct: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVKTDQQXXXXXXXXXXXXXXXXTIATTHQ 120
            ELRERVRAQIVAALVALDDPSRACNDLEEYLVKTDQQ                TIATTHQ
Sbjct: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVKTDQQARRRRLRDALAGFDAATIATTHQ 120

Query: 121  FCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLAR 180
            FCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLAR
Sbjct: 121  FCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLAR 180

Query: 181  VVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALEP 240
            VVVGNPATQL        SPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALEP
Sbjct: 181  VVVGNPATQLRPRDPDPDSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALEP 240

Query: 241  EDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGDI 300
            EDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGDI
Sbjct: 241  EDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGDI 300

Query: 301  ATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLVG 360
            ATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLVG
Sbjct: 301  ATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLVG 360

Query: 361  APRNDPFRLRVVSRKPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQAKDIA 420
            APRNDPFRLRVVSRKPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQAKDIA
Sbjct: 361  APRNDPFRLRVVSRKPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQAKDIA 420

Query: 421  VITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLVRAAA 480
            VITETHKD               VYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLVRAAA
Sbjct: 421  VITETHKDARACHAALLAAGIPAVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLVRAAA 480

Query: 481  ATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVLSWQG 540
            ATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVLSWQG
Sbjct: 481  ATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVLSWQG 540

Query: 541  GERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDAAAVQIM 600
            GERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQ             LDSDAAAVQIM
Sbjct: 541  GERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQRSERGGESERNRRLDSDAAAVQIM 600

Query: 601  TVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHVXXXXXXXXXXXXXXXXXXX 660
            TVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV                   
Sbjct: 601  TVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHVGGADPAVARAGRAEAAGDD 660

Query: 661  XXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPKISDEDALE 720
              LTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPKISDEDALE
Sbjct: 661  SRLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPKISDEDALE 720

Query: 721  RLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRTSYSGLLRAAET 780
            RLRAWEAAGGPVIEESVIG            DLAARKFFRAIDMAWKRTSYSGLLRAAET
Sbjct: 721  RLRAWEAAGGPVIEESVIGAVSPVPPEPAPEDLAARKFFRAIDMAWKRTSYSGLLRAAET 780

Query: 781  AGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLVHAVLETADPFA 840
            AGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLVHAVLETADPFA
Sbjct: 781  AGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLVHAVLETADPFA 840

Query: 841  EDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCEL 900
            EDLTAELATHIDAHSQHWP             PMHD            RQIGLRDRLCEL
Sbjct: 841  EDLTAELATHIDAHSQHWPVEVETAELAAALVPMHDTPLGPLAPGLTLRQIGLRDRLCEL 900

Query: 901  DFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGS 960
            DFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGS
Sbjct: 901  DFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGS 960

Query: 961  VDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHR 1020
            VDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHR
Sbjct: 961  VDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHR 1020

Query: 1021 YLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDA 1080
            YLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDA
Sbjct: 1021 YLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDA 1080

Query: 1081 EAP 1083
            EAP
Sbjct: 1081 EAP 1083


>tr|B1MFU8|B1MFU8_MYCA9 Tax_Id=561007 SubName:
            Full=Exodeoxyribonuclease V, beta subunit
            (RecB);[Mycobacterium abscessus]
          Length = 1081

 Score = 1478 bits (3826), Expect = 0.0
 Identities = 766/1082 (70%), Positives = 838/1082 (77%), Gaps = 6/1082 (0%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            MK FDLLGPLPA  +TTVLEASAGTGKTFALAGLVTR+VAEGVATLDQMLLITFGRAASQ
Sbjct: 1    MKRFDLLGPLPADRSTTVLEASAGTGKTFALAGLVTRYVAEGVATLDQMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVKTDQQXXXXXXXXXXXXXXXXTIATTHQ 120
            ELR+RVR QIV AL A  DPS A  DL +YL+  +Q                 TIATTHQ
Sbjct: 61   ELRDRVRGQIVDALRAFADPSTARTDLTQYLISAEQDTRQRRLRDALAGFDAATIATTHQ 120

Query: 121  FCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLAR 180
            FC IVLKSLGVAGDSD+GVTLVE+LD+LV EIV+D YL HFG  +D P LSYP AL+LAR
Sbjct: 121  FCHIVLKSLGVAGDSDSGVTLVENLDELVCEIVNDRYLTHFGKDRDAPPLSYPAALRLAR 180

Query: 181  VVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALEP 240
             VV NPATQL        S A   L FARDVL +LEIRKRRRG+LG+DDLLTRLADAL  
Sbjct: 181  EVVRNPATQLRPLQPEADSYAFAALGFARDVLEQLEIRKRRRGILGFDDLLTRLADALNA 240

Query: 241  EDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGDI 300
             DSPARVRM QRWPIVMVDEFQDTDPVQWQV+ERAFSG STLVLIGDPKQAIYAFRGGDI
Sbjct: 241  TDSPARVRMHQRWPIVMVDEFQDTDPVQWQVLERAFSGHSTLVLIGDPKQAIYAFRGGDI 300

Query: 301  ATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLVG 360
             TYLRAAATAGDKQTLGTNWRSD ALVDRLQ VLRGAQLGGPDIVVHDVQA HQGHRL G
Sbjct: 301  ETYLRAAATAGDKQTLGTNWRSDAALVDRLQVVLRGAQLGGPDIVVHDVQAHHQGHRLAG 360

Query: 361  APRNDPFRLRVVSRKPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQAKDIA 420
            AP NDPFRLRVVSR     +VIPI  LRR IGRDLAADI ALL+SGAT+  +PV+A+DIA
Sbjct: 361  APHNDPFRLRVVSRNRDGIKVIPIADLRRSIGRDLAADIGALLSSGATFDGRPVRARDIA 420

Query: 421  VITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLVRAAA 480
            VI E HKD               VYTGD+DVF+S+AA+DWLYLLEAFDQPHRPGLVRAAA
Sbjct: 421  VIVEAHKDARACHTALTEAGIPAVYTGDTDVFSSDAAQDWLYLLEAFDQPHRPGLVRAAA 480

Query: 481  ATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVLSWQG 540
            AT+FFGETAE+LA GG++LTD +A TLR WA  ARERGVAA+FEAAQLAGMGKRVLSW+G
Sbjct: 481  ATVFFGETAETLAVGGESLTDEIAGTLRTWAARARERGVAAVFEAAQLAGMGKRVLSWRG 540

Query: 541  GERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDAAAVQIM 600
            GER+MTDLAH+T+LLQ+TAHR GFG AALRDWLRTQ             LDSDAAAVQIM
Sbjct: 541  GERMMTDLAHLTELLQETAHRNGFGPAALRDWLRTQCSEGGAEAERNRRLDSDAAAVQIM 600

Query: 601  TVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----XXXXXXXXXXXXXXX 656
            TVWVSKGLQFPVVYLPF+FNRYVPE + VL+H+DG RCLH+                   
Sbjct: 601  TVWVSKGLQFPVVYLPFSFNRYVPEREYVLYHEDGLRCLHIGGREDPDYSMADLAGRTEA 660

Query: 657  XXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPKISDE 716
                  L YVALTRAQSQVVAWWAPS+DEPNGGLSRL+RGRAPG   VPDKCSP KISD 
Sbjct: 661  ARDASRLAYVALTRAQSQVVAWWAPSFDEPNGGLSRLLRGRAPGNPSVPDKCSPAKISDA 720

Query: 717  DALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRTSYSGLLR 776
            D L+RLRAWEA GGPV+E++++             +LA R F R ID AW+RTSYSGLLR
Sbjct: 721  DVLKRLRAWEAQGGPVVEDALVTGFVPAATSSPSDNLAVRVFDRPIDTAWRRTSYSGLLR 780

Query: 777  AAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLVHAVLETA 836
            AAE +  GVSSEPE+ E DDE D+IP+ +   GADVPSPMA LP GAAFGSLVHAVLET 
Sbjct: 781  AAEES--GVSSEPEIAELDDEVDEIPLRSMPAGADVPSPMAQLPAGAAFGSLVHAVLETT 838

Query: 837  DPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDR 896
            DP A DL AEL T I  H + WP             PMHD            RQIGLRDR
Sbjct: 839  DPLAPDLVAELQTQIIRHRERWPVEIPAAELAAALEPMHDTPLGPLLPGVTLRQIGLRDR 898

Query: 897  LCELDFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGY 956
            LCELDFEFP+AGGD     FARL+DVG LLRE+L ADDPL VYA RL+   LG Q LRGY
Sbjct: 899  LCELDFEFPLAGGDAAADSFARLADVGMLLREHLAADDPLGVYASRLTGPGLGGQSLRGY 958

Query: 957  LSGSVDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAV 1016
            LSGSVDAVLRVG ++V+VDYKTNWLGTGD  LTAADY R RMVEAMLHSDYPLQALLY+V
Sbjct: 959  LSGSVDAVLRVGSRYVVVDYKTNWLGTGDAPLTAADYSRPRMVEAMLHSDYPLQALLYSV 1018

Query: 1017 VLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSK 1076
            VLHR+L WRL GY P  HLGG +YLFVRGMCGA TPVV+GHPAGVFSW+PP+ LVVALS+
Sbjct: 1019 VLHRFLSWRLPGYRPEEHLGGAVYLFVRGMCGATTPVVEGHPAGVFSWQPPSALVVALSE 1078

Query: 1077 LL 1078
            LL
Sbjct: 1079 LL 1080


>tr|D5PC41|D5PC41_9MYCO Tax_Id=525368 (recB)SubName:
            Full=Exodeoxyribonuclease V beta subunit;
            EC=3.1.11.5;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 1103

 Score = 1342 bits (3472), Expect = 0.0
 Identities = 715/1095 (65%), Positives = 803/1095 (73%), Gaps = 17/1095 (1%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   +TTVL+ASAGTGKTFALAGLVTR+VAEG ATLDQMLLITFGRAASQ
Sbjct: 5    MARFELLGPLPTARSTTVLQASAGTGKTFALAGLVTRYVAEGAATLDQMLLITFGRAASQ 64

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR Q+V A+ A DD + A N+L  +L+     ++                 TIAT
Sbjct: 65   ELRERVRGQMVDAVAAFDDGAGA-NELVAHLLDGTDAERASRRQRLRDALAGFDAATIAT 123

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            THQFCQ+VLKSLGVAGD+ A VTL+ESLD+L+ EIVDDLYLAHFG ++DDP L+Y +AL+
Sbjct: 124  THQFCQLVLKSLGVAGDTAANVTLLESLDELIVEIVDDLYLAHFGRERDDPALAYRDALR 183

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LAR VV NP+TQL        S AAV + FA++VLAEL+ RKRR GVL YDDLL+RLADA
Sbjct: 184  LAREVVRNPSTQLRPLHPEPGSRAAVCVGFAKEVLAELDTRKRRLGVLDYDDLLSRLADA 243

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            L  +DSPARVRM  RWPIVMVDEFQDTDPVQWQVI+RAFSGRST++LIGDPKQAIYAFRG
Sbjct: 244  LATDDSPARVRMHHRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTVILIGDPKQAIYAFRG 303

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYLRAA TAG+K+TL TNWRSD ALV+RLQ VL GAQLG P IVV DV   H+GHR
Sbjct: 304  GDIVTYLRAAETAGEKKTLATNWRSDAALVERLQVVLLGAQLGDPAIVVDDVDTYHRGHR 363

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L GAPRNDPFRLRVV R+       + +PID+LR HIG D+AADI ALL + AT+  +P+
Sbjct: 364  LAGAPRNDPFRLRVVQRETLGRSGIQNMPIDELRAHIGADVAADIRALLAARATFEGRPL 423

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
            QA+DIAVI E HKD               VYTGDSDVF S+AAEDWL LLEAFDQPHRPG
Sbjct: 424  QARDIAVIVEKHKDAAACFKALCDAGVPAVYTGDSDVFASDAAEDWLCLLEAFDQPHRPG 483

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            +VRAAAATMFFGETAESLAAGGDALTDRVA+TLREWAGHARERGVAAIFEAAQL+GMG R
Sbjct: 484  MVRAAAATMFFGETAESLAAGGDALTDRVAETLREWAGHARERGVAAIFEAAQLSGMGDR 543

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS QGGER MTDLAH+ QLL    HRE   L ALRDWLR Q             LDSDA
Sbjct: 544  VLSAQGGERHMTDLAHIAQLLGQVTHRERSSLPALRDWLRRQREERVGAPERNRRLDSDA 603

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----XXXXXXXXX 650
            AAVQIMTV+VSKGLQ+P+VYLPFAFNR   + D+VLFHDDG RCLH+             
Sbjct: 604  AAVQIMTVFVSKGLQYPIVYLPFAFNRNTQDRDVVLFHDDGVRCLHIGGKDSPDFKAVEI 663

Query: 651  XXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSP 710
                        LTYVALTRAQSQVVAWW+P++DEPNGGLSRL+RGR PGEA VPD+C P
Sbjct: 664  LGRKEDASDDSRLTYVALTRAQSQVVAWWSPAFDEPNGGLSRLLRGRRPGEAFVPDRCEP 723

Query: 711  PKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRTS 770
             KISDEDAL+RLR WEAAGGPVIE SV+              L  R F R ID  W+RTS
Sbjct: 724  AKISDEDALDRLREWEAAGGPVIERSVVAAAPSVPPEPVPSGLDNRHFHRGIDTGWRRTS 783

Query: 771  YSGLLRAAET-AGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            YSGL+R  ET    GV SEPEVTE DDE  D+PV   A G   PSPMA LP GA FGSLV
Sbjct: 784  YSGLIRVTETFETTGVGSEPEVTELDDEAGDVPVAQGASGPAAPSPMADLPVGAKFGSLV 843

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXR 889
            HAVLETADP A DL AELA  +  HS  WP             PMHD            R
Sbjct: 844  HAVLETADPLAADLAAELAARVRTHSVWWPVDVPPDALAAALVPMHDTPLGPLAGGRTLR 903

Query: 890  QIGLRDRLCELDFEFPMAGGD-LRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGIL 948
            QIGL DRL ELDFEFP+AGGD +  G   RL+D+G  LR +LPADD LA YA RL +  L
Sbjct: 904  QIGLADRLRELDFEFPLAGGDAVSAGPEIRLADLGAALRTHLPADDALAPYAGRLLSRPL 963

Query: 949  GVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLH 1004
            G QPLRGYL+GSVDAVLRV      ++++VDYKTNWLG  D  LT+ADY R R+VEAMLH
Sbjct: 964  GEQPLRGYLTGSVDAVLRVPDGAARRYLVVDYKTNWLGDPDRPLTSADYDRPRLVEAMLH 1023

Query: 1005 SDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSW 1064
            SDYPLQALLY+VVLHR+L WRL  Y P  HLGGVLYLFVRGMCGA TP  DGHP+GVFSW
Sbjct: 1024 SDYPLQALLYSVVLHRFLRWRLPDYHPDRHLGGVLYLFVRGMCGAATPAADGHPSGVFSW 1083

Query: 1065 EPPADLVVALSKLLD 1079
             PP+ L+  +S +LD
Sbjct: 1084 RPPSALIAEVSDVLD 1098


>tr|A0QL86|A0QL86_MYCA1 Tax_Id=243243 (recB)SubName:
            Full=Exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Mycobacterium avium]
          Length = 1100

 Score = 1339 bits (3465), Expect = 0.0
 Identities = 718/1098 (65%), Positives = 802/1098 (73%), Gaps = 19/1098 (1%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M+ FDLLG LPA  +TTVLEASAGTGKTFALAGLVTR++A+G ATLDQMLLITFGRAASQ
Sbjct: 1    MERFDLLGALPAARSTTVLEASAGTGKTFALAGLVTRYLADGAATLDQMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSRAC-NDLEEYLVKTDQQXXXXXXXXXXXXXXXX---TIA 116
            ELRERVR QIV A+ A  DPSRA  N+L  YL+   +                    TIA
Sbjct: 61   ELRERVRCQIVDAVAAFADPSRAGDNELVAYLLDGTEDRLAARRQRLRDGLAGFDAATIA 120

Query: 117  TTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEAL 176
            TTHQFCQ+VL+SLGVAGD+ AGVTL++SLD+LV+EIVDDLYLAHFG   DDP L Y EAL
Sbjct: 121  TTHQFCQLVLRSLGVAGDTAAGVTLLDSLDELVAEIVDDLYLAHFGQDHDDPVLHYREAL 180

Query: 177  KLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLAD 236
            +LAR VV NP+ QL        S AAV L+FA DVLAEL+ RKRR GVLGYDDLLTRLAD
Sbjct: 181  RLARDVVNNPSAQLRPLHPEPGSRAAVSLRFANDVLAELDTRKRRLGVLGYDDLLTRLAD 240

Query: 237  ALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFR 296
            AL  E SPAR+RM QRWPIVMVDEFQDTDPVQWQVI+RAFSGRSTL+LIGDPKQAIYAFR
Sbjct: 241  ALATEHSPARLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTLILIGDPKQAIYAFR 300

Query: 297  GGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGH 356
            GGDI TYLRAA TAG K+TL TNWRSD AL+ RLQ VLRGAQLG P IVV+DV A H+GH
Sbjct: 301  GGDIVTYLRAAETAGQKKTLDTNWRSDSALLQRLQVVLRGAQLGDPAIVVNDVAAHHRGH 360

Query: 357  RLVGAPRNDPFRLRVVSRKPGNTRVI---PIDQLRRHIGRDLAADISALLNSGATWCDQP 413
            RL GAPRNDPFRLRVVSR     R I   PID+LR+HIG DLAADI ALL +GAT+  +P
Sbjct: 361  RLSGAPRNDPFRLRVVSRNTLGRRGIANLPIDELRQHIGADLAADIRALLAAGATFDGKP 420

Query: 414  VQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRP 473
            V+A DIAVI E H+D               VYTG+SDVFTS+AAEDWL LLEAFDQPHRP
Sbjct: 421  VRAGDIAVIVERHRDAQACFTALCDAGVPAVYTGNSDVFTSQAAEDWLCLLEAFDQPHRP 480

Query: 474  GLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGK 533
            G+VRAAAATMFFGETAE+LAAGGDALTDR+A TLREWAGHARERGVAAIFEAAQL GMG 
Sbjct: 481  GVVRAAAATMFFGETAETLAAGGDALTDRIAQTLREWAGHARERGVAAIFEAAQLLGMGN 540

Query: 534  RVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSD 593
            RVL WQGG R MTDLAH+TQLL + AH E   L ALRDWLR Q             LDSD
Sbjct: 541  RVLGWQGGARHMTDLAHLTQLLGEVAHCEHHNLPALRDWLRRQRDERSGAPERNRRLDSD 600

Query: 594  AAAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHD-DGQRCLHV----XXXXXXX 648
            AAAVQIMTV+VSKGLQ+P+VYLPFAF+R   + D+VLFHD DG RCLHV           
Sbjct: 601  AAAVQIMTVFVSKGLQYPIVYLPFAFHRNTTDSDVVLFHDEDGTRCLHVGGKDSPDFKTV 660

Query: 649  XXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKC 708
                          LTYVALTRAQ+QVVAWW+P+Y EPNGGLSRL+RGR PGE +VPD+C
Sbjct: 661  ERLGRKEDASDDSRLTYVALTRAQAQVVAWWSPAYHEPNGGLSRLLRGRRPGEPVVPDRC 720

Query: 709  SPPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKR 768
             P KISDEDAL RLR WEAAGGPVIEE+V               L  R F R ID  W+R
Sbjct: 721  EPAKISDEDALARLREWEAAGGPVIEEAVPAPAPPLPGVPVPARLENRHFHRGIDTGWRR 780

Query: 769  TSYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSL 828
            TSYSGL+R A+ +GVG  SEPE    DDE  DI +       DV SPMA LP GA FG+L
Sbjct: 781  TSYSGLIRQAQPSGVG--SEPEAAGLDDEVGDILLAPATSVGDVASPMADLPAGATFGTL 838

Query: 829  VHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXX 888
            VHAVL+TADPFA DL AEL   I  HS  WP             PMHD            
Sbjct: 839  VHAVLQTADPFAPDLAAELTARIREHSVWWPVAATPEDMAAAMVPMHDTPLGPLAGGLTL 898

Query: 889  RQIGLRDRLCELDFEFPMAGGDLRGG-RFARLSDVGELLREYLPADDPLAVYAERLSTGI 947
            R+IGL DRLCELDFE P+AGGD R      RL+D+  LLR +LPADD LA YA+RL+   
Sbjct: 899  RRIGLSDRLCELDFELPLAGGDRRSAPPEVRLADLAPLLRAHLPADDVLACYADRLTDRS 958

Query: 948  LGVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            LG + LRGYL+GS+DAVLR+    G ++++VDYKTN LG     LTAADY R RMVEAML
Sbjct: 959  LGAESLRGYLTGSIDAVLRIPDGAGHRYLVVDYKTNRLGDAQHPLTAADYDRPRMVEAML 1018

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY+ VLHR+L WRL+GYDP  HLGG+LYLFVRGMCG  TPV DGHP+GVF 
Sbjct: 1019 HSDYPLQALLYSAVLHRFLRWRLAGYDPDRHLGGILYLFVRGMCGPDTPVRDGHPSGVFD 1078

Query: 1064 WEPPADLVVALSKLLDAE 1081
            W PP+ L+ ALS LLDA+
Sbjct: 1079 WRPPSSLIAALSDLLDAQ 1096


>tr|A3PUY8|A3PUY8_MYCSJ Tax_Id=164757 SubName:
            Full=Exodeoxyribonuclease V, beta subunit;[Mycobacterium
            sp.]
          Length = 1115

 Score = 1338 bits (3463), Expect = 0.0
 Identities = 712/1098 (64%), Positives = 796/1098 (72%), Gaps = 19/1098 (1%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDLLGPLPAP TTTVLEASAGTGKTFALAGLVTR++AEG ATLDQMLL+TFGRAASQELR
Sbjct: 15   FDLLGPLPAPLTTTVLEASAGTGKTFALAGLVTRYIAEGAATLDQMLLVTFGRAASQELR 74

Query: 64   ERVRAQIVAALVALDDPSRAC-NDLEEYLVKT---DQQXXXXXXXXXXXXXXXXTIATTH 119
            ERVR Q++ ALVA +DPS    N L  +L+     ++                 TIATTH
Sbjct: 75   ERVRCQMLDALVAFEDPSTVGDNQLVAHLIDAPDDERHLRKQRLKDALAGFDAATIATTH 134

Query: 120  QFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLA 179
            QFCQ+VLKSLGVAGD+D GV LVESLDDL +EIVDDLYLAHFG Q+DDP ++  +AL+LA
Sbjct: 135  QFCQLVLKSLGVAGDTDTGVQLVESLDDLTAEIVDDLYLAHFGQQRDDPVMTRGQALELA 194

Query: 180  RVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALE 239
              VVGN  T+L        + +AVR++FA+ V AELE RKRR G+L YDDLL+RLA+AL 
Sbjct: 195  HEVVGNAGTELRPQNPPPGTESAVRVEFAKAVCAELERRKRRLGILHYDDLLSRLANALT 254

Query: 240  PEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGD 299
             EDSPAR RM +RW IVMVDEFQDTDPVQWQV++RAF+GRSTL+LIGDPKQAIYAFRGGD
Sbjct: 255  GEDSPARTRMHRRWSIVMVDEFQDTDPVQWQVLDRAFTGRSTLILIGDPKQAIYAFRGGD 314

Query: 300  IATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLV 359
            IATYL AA+TAG +QTLGTNWRSD  LVDRLQ VLR A+LG P+IVV  V+ARH+GHRL 
Sbjct: 315  IATYLHAASTAGHRQTLGTNWRSDGDLVDRLQVVLRDAELGDPEIVVRPVEARHKGHRLA 374

Query: 360  GAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQA 416
            GAP NDPFRLR+VSR        R I ID+LR HI  DLAADI  LL SGAT+CD+ ++A
Sbjct: 375  GAPHNDPFRLRIVSRDTFGIRGDRTIAIDRLRAHISADLAADIGRLLASGATFCDKKIEA 434

Query: 417  KDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLV 476
            KDIAVI E HKD               VYTGDSDVF S A +DWL LLEAFDQPHRPGLV
Sbjct: 435  KDIAVIVEKHKDARACFDALSVAGIPAVYTGDSDVFNSPAGDDWLCLLEAFDQPHRPGLV 494

Query: 477  RAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVL 536
            RAAA TMFFG TAE LAA GD LTD +AD LREWA HARERGVAAIFEAA + GMG+RVL
Sbjct: 495  RAAATTMFFGRTAEELAARGDRLTDEIADRLREWADHARERGVAAIFEAANMTGMGRRVL 554

Query: 537  SWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDAAA 596
            SW+ GER MTDLAH+TQ+L +TAHRE F L ALRDWLRTQ             LD+DAAA
Sbjct: 555  SWRDGERHMTDLAHLTQVLHETAHREHFNLPALRDWLRTQREERSGATERNRRLDNDAAA 614

Query: 597  VQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----XXXXXXXXXXX 652
            VQIMTVWVSKGLQ+PVVYLPFAFNR +   D VLFHDD  RCLH+               
Sbjct: 615  VQIMTVWVSKGLQYPVVYLPFAFNRNIQTRDCVLFHDDRTRCLHIGGDDSPDHAQVERLG 674

Query: 653  XXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPK 712
                      LTYVALTRAQSQVVAWWAPS+DEPNGGLSRL+RGRAPGE  VPD+C PPK
Sbjct: 675  RKEAAGDDVRLTYVALTRAQSQVVAWWAPSWDEPNGGLSRLLRGRAPGETTVPDRCDPPK 734

Query: 713  ISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRTSYS 772
            + D DA   LRAW   GGPV+E+S I             DL  R F R ID AW+RTSYS
Sbjct: 735  VDDADARTALRAWADLGGPVLEDSEIAAPAAPEPREHPTDLDVRHFHRGIDTAWRRTSYS 794

Query: 773  GLLRAAE--TAGVGVSSEPEVTERDDEFDDIPVVAPAEGAD-VPSPMAHLPTGAAFGSLV 829
            GLLRAAE   A  GV+SEPEV E DDE  ++PV       D VPSPMA LPTGA FGSLV
Sbjct: 795  GLLRAAEGSPAVAGVTSEPEVGELDDEAAEVPVSESHTDVDPVPSPMAELPTGAKFGSLV 854

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXR 889
            HAVLE ADPFA DL AEL   I  H   WP             PMHD            R
Sbjct: 855  HAVLEHADPFAADLKAELEHRIREHMVWWPVDVEAEALADALLPMHDTPLGPLVPNVTLR 914

Query: 890  QIGLRDRLCELDFEFPMAGGDLRGGRFA-RLSDVGELLREYLPADDPLAVYAERLSTGIL 948
            QIGLRDRL ELDFEFP+AGGD+RGG  A  L+DVG LL  +L ADDP+A Y +RL+   L
Sbjct: 915  QIGLRDRLRELDFEFPLAGGDVRGGAPAITLADVGHLLGAHLSADDPMAPYVDRLTDRAL 974

Query: 949  GVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLH 1004
            G Q L+GYL+GS+D VLRV    G ++V+ D+KTNWLG  +  LTAADY R RM EAMLH
Sbjct: 975  GGQSLKGYLTGSIDVVLRVRDTTGVRYVVADWKTNWLGEPEKPLTAADYSRTRMAEAMLH 1034

Query: 1005 SDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSW 1064
            SDYPLQALLY VVLHR+L WR  GYDPA HLGGVLYLFVRGMCGA TPV+DG P GVFSW
Sbjct: 1035 SDYPLQALLYCVVLHRFLRWRQPGYDPAKHLGGVLYLFVRGMCGASTPVIDGDPTGVFSW 1094

Query: 1065 EPPADLVVALSKLLDAEA 1082
             PPA L+VALS LLDA A
Sbjct: 1095 RPPASLIVALSDLLDAGA 1112


>tr|A1T4E4|A1T4E4_MYCVP Tax_Id=350058 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Mycobacterium vanbaalenii]
          Length = 1097

 Score = 1337 bits (3461), Expect = 0.0
 Identities = 707/1093 (64%), Positives = 802/1093 (73%), Gaps = 13/1093 (1%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M+ FDLLGPLPAP TTTVLEASAGTGKTFALAGLVTR+VAEGVATLDQMLLITFGRAASQ
Sbjct: 1    MEPFDLLGPLPAPRTTTVLEASAGTGKTFALAGLVTRYVAEGVATLDQMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSRAC-NDLEEYLVKTDQ---QXXXXXXXXXXXXXXXXTIA 116
            ELRERVRAQI+ AL A DDPS A  N++  +L+                        TIA
Sbjct: 61   ELRERVRAQILDALRAFDDPSHAADNEIVAHLLTGSHGELTERRQRLRDALAGFDAATIA 120

Query: 117  TTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEAL 176
            TTHQFCQ+VL+SLGVAGD+D+GV LVESLDDLV+EIVDDLYLAHFG   D+P L+Y +AL
Sbjct: 121  TTHQFCQLVLRSLGVAGDTDSGVELVESLDDLVTEIVDDLYLAHFGQDHDEPLLTYADAL 180

Query: 177  KLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLAD 236
             LAR VVGN  T+L        S   VR++FAR V AELE RKRR G+L YDDLL+RLA 
Sbjct: 181  SLAREVVGNAHTELRPTDPPPGSDPFVRVQFARAVCAELETRKRRLGILHYDDLLSRLAK 240

Query: 237  ALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFR 296
            ALEP+DSPAR+RMQ RW IVMVDEFQDTDPVQWQVI+ AFSG +T++LIGDPKQAIYAFR
Sbjct: 241  ALEPQDSPARMRMQHRWSIVMVDEFQDTDPVQWQVIDCAFSGHATVILIGDPKQAIYAFR 300

Query: 297  GGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGH 356
            GGDI TYL A +TA  ++TLGTN+RSD  LVD LQAV+R AQLG P IV H V+A H+ H
Sbjct: 301  GGDIVTYLHAVSTADRQKTLGTNYRSDGPLVDSLQAVMRDAQLGDPRIVAHRVEAHHRDH 360

Query: 357  RLVGAPRNDPFRLRVVSRKPGNT---RVIPIDQLRRHIGRDLAADISALLNSGATWCDQP 413
            RL GAPRN PFRLRVV+R    T   RV+ IDQLRRHI +D+AADI+ALL S AT+CD+P
Sbjct: 361  RLAGAPRNAPFRLRVVTRDQFGTRPDRVVAIDQLRRHIPQDMAADIAALLASDATFCDRP 420

Query: 414  VQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRP 473
            VQ  D+AVI E+H+D               VYTGDSDVFTS AA+DW+ LLEAFDQPHR 
Sbjct: 421  VQPGDVAVIVESHRDGHACFDALTAAGIPAVYTGDSDVFTSPAADDWMCLLEAFDQPHRS 480

Query: 474  GLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGK 533
            GLVRAAA TMFFGETAESLAA GD LTDRVA+TLR+WA  AR+RGVAA+FEAAQL GMG+
Sbjct: 481  GLVRAAATTMFFGETAESLAAEGDTLTDRVAETLRQWADFARDRGVAAVFEAAQLGGMGE 540

Query: 534  RVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSD 593
            RVLSW  GER MTDLAH+TQ+L  TAHRE F L ALRDWLR Q             LDSD
Sbjct: 541  RVLSWVDGERHMTDLAHLTQVLHGTAHREHFSLPALRDWLRGQRDERSGAPERNRRLDSD 600

Query: 594  AAAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----XXXXXXXX 649
            AAAVQIMTVWVSKGLQFPVVYLPFAFNR +   D+V FHD   RCLH+            
Sbjct: 601  AAAVQIMTVWVSKGLQFPVVYLPFAFNRNIQTRDVVTFHDGDIRCLHIGGERSPDHAAAQ 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVA+TRAQSQVVAWWAPS DEPNGGLSRL+RGRAPG+ +VPD+C 
Sbjct: 661  QQGRREAAGDDVRLTYVAMTRAQSQVVAWWAPSNDEPNGGLSRLLRGRAPGDPVVPDRCD 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
            PP+I D DA+ +LRAW  AGGPV+EESVI             DL  R F R ID +W+RT
Sbjct: 721  PPRIDDPDAMAQLRAWSDAGGPVLEESVIAASVTVELPSPAEDLDVRHFHRRIDTSWRRT 780

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGAD-VPSPMAHLPTGAAFGSL 828
            SYSGL+RAAE+   GV SEPEV E DDE  ++PV     G D +PSPMA LP GA FG+L
Sbjct: 781  SYSGLIRAAESEQTGVGSEPEVVELDDEAGEVPVPGAGGGGDQMPSPMADLPMGAKFGTL 840

Query: 829  VHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXX 888
            VHAVLETADPFA DL AEL +H+  HS  WP             P+HD            
Sbjct: 841  VHAVLETADPFATDLAAELESHVRRHSLWWPVDVPAADLAAALVPLHDTPLGPLAPGVTL 900

Query: 889  RQIGLRDRLCELDFEFPMAGGDLR-GGRFARLSDVGELLREYLPADDPLAVYAERLSTGI 947
            R IGLRDRL E++FEFP+AGGD R       L+DVG LL  +LPADDPLA YAERL+ G 
Sbjct: 901  RDIGLRDRLREMEFEFPLAGGDRRVEVPDISLADVGRLLAAHLPADDPLAPYAERLTGGT 960

Query: 948  LGVQPLRGYLSGSVDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDY 1007
            L  Q L+GYL+GSVDAVLRVG+++++VDYKTNWLG     LTAADYG+ R+ E MLHSDY
Sbjct: 961  LAAQSLKGYLNGSVDAVLRVGDRYLVVDYKTNWLGDPARPLTAADYGKARLTEVMLHSDY 1020

Query: 1008 PLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPP 1067
            PLQALLY VVLHR+L WR  GY   +H+ GVLYLFVRGMCGA TPVVDGHPAGVFSW+PP
Sbjct: 1021 PLQALLYCVVLHRFLRWRAPGYRAESHIAGVLYLFVRGMCGADTPVVDGHPAGVFSWQPP 1080

Query: 1068 ADLVVALSKLLDA 1080
            A L+ ALS LLDA
Sbjct: 1081 AALIEALSDLLDA 1093


>tr|Q1BDL8|Q1BDL8_MYCSS Tax_Id=164756 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Mycobacterium sp.]
          Length = 1115

 Score = 1337 bits (3460), Expect = 0.0
 Identities = 713/1098 (64%), Positives = 795/1098 (72%), Gaps = 19/1098 (1%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDLLG LPAP TTTVLEASAGTGKTFALAGLVTR++AEG ATLDQMLL+TFGRAASQELR
Sbjct: 15   FDLLGRLPAPLTTTVLEASAGTGKTFALAGLVTRYIAEGAATLDQMLLVTFGRAASQELR 74

Query: 64   ERVRAQIVAALVALDDPSRAC-NDLEEYLVKT---DQQXXXXXXXXXXXXXXXXTIATTH 119
            ERVR Q++ ALVA +DPS    N L E+L+     ++                 TIATTH
Sbjct: 75   ERVRCQMLDALVAFEDPSTVGDNQLVEHLIDAPDDERHLRKQRLKDALAGFDAATIATTH 134

Query: 120  QFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLA 179
            QFCQ+VLKSLGVAGD+D GV LVESLDDL +EIVDDLYLAHFG Q+DDP ++  +AL+LA
Sbjct: 135  QFCQLVLKSLGVAGDTDTGVQLVESLDDLTAEIVDDLYLAHFGQQRDDPVMTRGQALELA 194

Query: 180  RVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALE 239
            R VVGN  T+L        + AA R++FA+ V AELE RKRR G+L YDDLL+RLA+AL 
Sbjct: 195  REVVGNAGTELRPQNPPPETEAAARVEFAKAVCAELERRKRRLGILHYDDLLSRLANALT 254

Query: 240  PEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGD 299
             EDSPAR RM +RW IVMVDEFQDTDPVQWQV++RAF+GRSTL+LIGDPKQAIYAFRGGD
Sbjct: 255  GEDSPARTRMHRRWSIVMVDEFQDTDPVQWQVLDRAFTGRSTLILIGDPKQAIYAFRGGD 314

Query: 300  IATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLV 359
            IATYL AA+TAG +QTLGTNWRSD  LVDRLQ VLR A+LG P+IVV  V+ARH+GHRL 
Sbjct: 315  IATYLHAASTAGHRQTLGTNWRSDGDLVDRLQVVLRDAELGDPEIVVRPVEARHKGHRLA 374

Query: 360  GAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQA 416
            GAP NDPFRLR+VSR        R IPID+LR HI  DLAADI  LL SGAT+CD+ ++A
Sbjct: 375  GAPHNDPFRLRIVSRDTFGIRGDRTIPIDRLRPHISADLAADIGRLLASGATFCDKKIEA 434

Query: 417  KDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLV 476
            KDIAVI E HKD               VYTGDSDVF S A +DWL LLEAFDQPHR GLV
Sbjct: 435  KDIAVIVEKHKDARACFDALSVAGIPAVYTGDSDVFNSPAGDDWLCLLEAFDQPHRSGLV 494

Query: 477  RAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVL 536
            RAAA TMFFG TAE LAA GD LTD +AD LREWA HARERGVAAIFEAA + GMG+RVL
Sbjct: 495  RAAATTMFFGRTAEELAARGDRLTDEIADRLREWADHARERGVAAIFEAANMTGMGRRVL 554

Query: 537  SWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDAAA 596
            SW+ GER MTDLAH+TQ+L +TAHRE F L ALRDWLRTQ             LD+DAAA
Sbjct: 555  SWRDGERHMTDLAHLTQVLHETAHREHFNLPALRDWLRTQREERSGATERNRRLDNDAAA 614

Query: 597  VQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----XXXXXXXXXXX 652
            VQIMTVWVSKGLQ+PVVYLPFAFNR +   D VLFHDD  RCLH+               
Sbjct: 615  VQIMTVWVSKGLQYPVVYLPFAFNRNIQTRDCVLFHDDRTRCLHIGGDDSPDHAQVERLG 674

Query: 653  XXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPK 712
                      LTYVALTRAQSQVVAWWAPS+DEPNGGLSRL+RGRAPGE  VPD+C PPK
Sbjct: 675  RKEAAGDDIRLTYVALTRAQSQVVAWWAPSWDEPNGGLSRLLRGRAPGETTVPDRCDPPK 734

Query: 713  ISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRTSYS 772
            + D DA   LRAW   GGPV+E+S I             DL  R F R ID AW+RTSYS
Sbjct: 735  LDDADARTALRAWADLGGPVLEDSEIAAPAAPELREHPTDLDVRHFHRGIDTAWRRTSYS 794

Query: 773  GLLRAAE--TAGVGVSSEPEVTERDDEFDDIPVVAPAEGAD-VPSPMAHLPTGAAFGSLV 829
            GLLRAAE   A  GV+SEPEV E DDE  ++PV       D VPSPMA LPTGA FGSLV
Sbjct: 795  GLLRAAEGSPAVAGVTSEPEVGELDDEAAEVPVSESHTDVDPVPSPMAELPTGAKFGSLV 854

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXR 889
            HAVLE ADPFA DL AEL   I  H   WP             PMHD            R
Sbjct: 855  HAVLEHADPFAADLKAELEHRIREHMVWWPVDVEAEALADALLPMHDTPLGPLAPNVTLR 914

Query: 890  QIGLRDRLCELDFEFPMAGGDLRGGRFA-RLSDVGELLREYLPADDPLAVYAERLSTGIL 948
            QIG RDRL ELDFEFP+AGGD+RGG  A  L+DVG LL  +LPADDP+  Y +RL+   L
Sbjct: 915  QIGPRDRLRELDFEFPLAGGDVRGGAPAITLADVGRLLGAHLPADDPMTPYVDRLTDRAL 974

Query: 949  GVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLH 1004
            G Q L+GYL+GS+D VLRV    G ++V+ D+KTNWLG  +  LTAADY R RM EAMLH
Sbjct: 975  GGQSLKGYLTGSIDVVLRVRDTTGVRYVVADWKTNWLGEREKPLTAADYSRTRMAEAMLH 1034

Query: 1005 SDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSW 1064
            SDYPLQALLY VVLHR+L WR  GYDPA HLGGVLYLFVRGMCGA TPVVDG P GVFSW
Sbjct: 1035 SDYPLQALLYCVVLHRFLRWRQPGYDPAKHLGGVLYLFVRGMCGASTPVVDGDPTGVFSW 1094

Query: 1065 EPPADLVVALSKLLDAEA 1082
             PPA L+VALS LLDA A
Sbjct: 1095 RPPASLIVALSDLLDAGA 1112


>tr|A1UBC3|A1UBC3_MYCSK Tax_Id=189918 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Mycobacterium sp.]
          Length = 1115

 Score = 1337 bits (3460), Expect = 0.0
 Identities = 713/1098 (64%), Positives = 795/1098 (72%), Gaps = 19/1098 (1%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDLLG LPAP TTTVLEASAGTGKTFALAGLVTR++AEG ATLDQMLL+TFGRAASQELR
Sbjct: 15   FDLLGRLPAPLTTTVLEASAGTGKTFALAGLVTRYIAEGAATLDQMLLVTFGRAASQELR 74

Query: 64   ERVRAQIVAALVALDDPSRAC-NDLEEYLVKT---DQQXXXXXXXXXXXXXXXXTIATTH 119
            ERVR Q++ ALVA +DPS    N L E+L+     ++                 TIATTH
Sbjct: 75   ERVRCQMLDALVAFEDPSTVGDNQLVEHLIDAPDDERHLRKQRLKDALAGFDAATIATTH 134

Query: 120  QFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALKLA 179
            QFCQ+VLKSLGVAGD+D GV LVESLDDL +EIVDDLYLAHFG Q+DDP ++  +AL+LA
Sbjct: 135  QFCQLVLKSLGVAGDTDTGVQLVESLDDLTAEIVDDLYLAHFGQQRDDPVMTRGQALELA 194

Query: 180  RVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADALE 239
            R VVGN  T+L        + AA R++FA+ V AELE RKRR G+L YDDLL+RLA+AL 
Sbjct: 195  REVVGNAGTELRPQNPPPETEAAARVEFAKAVCAELERRKRRLGILHYDDLLSRLANALT 254

Query: 240  PEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRGGD 299
             EDSPAR RM +RW IVMVDEFQDTDPVQWQV++RAF+GRSTL+LIGDPKQAIYAFRGGD
Sbjct: 255  GEDSPARTRMHRRWSIVMVDEFQDTDPVQWQVLDRAFTGRSTLILIGDPKQAIYAFRGGD 314

Query: 300  IATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHRLV 359
            IATYL AA+TAG +QTLGTNWRSD  LVDRLQ VLR A+LG P+IVV  V+ARH+GHRL 
Sbjct: 315  IATYLHAASTAGHRQTLGTNWRSDGDLVDRLQVVLRDAELGDPEIVVRPVEARHKGHRLA 374

Query: 360  GAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPVQA 416
            GAP NDPFRLR+VSR        R IPID+LR HI  DLAADI  LL SGAT+CD+ ++A
Sbjct: 375  GAPHNDPFRLRIVSRDTFGIRGDRTIPIDRLRPHISADLAADIGRLLASGATFCDKKIEA 434

Query: 417  KDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPGLV 476
            KDIAVI E HKD               VYTGDSDVF S A +DWL LLEAFDQPHR GLV
Sbjct: 435  KDIAVIVEKHKDARACFDALSVAGIPAVYTGDSDVFNSPAGDDWLCLLEAFDQPHRSGLV 494

Query: 477  RAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKRVL 536
            RAAA TMFFG TAE LAA GD LTD +AD LREWA HARERGVAAIFEAA + GMG+RVL
Sbjct: 495  RAAATTMFFGRTAEELAARGDRLTDEIADRLREWADHARERGVAAIFEAANMTGMGRRVL 554

Query: 537  SWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDAAA 596
            SW+ GER MTDLAH+TQ+L +TAHRE F L ALRDWLRTQ             LD+DAAA
Sbjct: 555  SWRDGERHMTDLAHLTQVLHETAHREHFNLPALRDWLRTQREERSGATERNRRLDNDAAA 614

Query: 597  VQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----XXXXXXXXXXX 652
            VQIMTVWVSKGLQ+PVVYLPFAFNR +   D VLFHDD  RCLH+               
Sbjct: 615  VQIMTVWVSKGLQYPVVYLPFAFNRNIQTRDCVLFHDDRTRCLHIGGDDSPDHAQVERLG 674

Query: 653  XXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCSPPK 712
                      LTYVALTRAQSQVVAWWAPS+DEPNGGLSRL+RGRAPGE  VPD+C PPK
Sbjct: 675  RKEAAGDDIRLTYVALTRAQSQVVAWWAPSWDEPNGGLSRLLRGRAPGETTVPDRCDPPK 734

Query: 713  ISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRTSYS 772
            + D DA   LRAW   GGPV+E+S I             DL  R F R ID AW+RTSYS
Sbjct: 735  LDDADARTALRAWADLGGPVLEDSEIAAPAAPELREHPTDLDVRHFHRGIDTAWRRTSYS 794

Query: 773  GLLRAAE--TAGVGVSSEPEVTERDDEFDDIPVVAPAEGAD-VPSPMAHLPTGAAFGSLV 829
            GLLRAAE   A  GV+SEPEV E DDE  ++PV       D VPSPMA LPTGA FGSLV
Sbjct: 795  GLLRAAEGSPAVAGVTSEPEVGELDDEAAEVPVSESHTDVDPVPSPMAELPTGAKFGSLV 854

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXR 889
            HAVLE ADPFA DL AEL   I  H   WP             PMHD            R
Sbjct: 855  HAVLEHADPFAADLKAELEHRIREHMVWWPVDVEAEALADALLPMHDTPLGPLAPNVTLR 914

Query: 890  QIGLRDRLCELDFEFPMAGGDLRGGRFA-RLSDVGELLREYLPADDPLAVYAERLSTGIL 948
            QIG RDRL ELDFEFP+AGGD+RGG  A  L+DVG LL  +LPADDP+  Y +RL+   L
Sbjct: 915  QIGPRDRLRELDFEFPLAGGDVRGGAPAITLADVGRLLGAHLPADDPMTPYVDRLTDRAL 974

Query: 949  GVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLH 1004
            G Q L+GYL+GS+D VLRV    G ++V+ D+KTNWLG  +  LTAADY R RM EAMLH
Sbjct: 975  GGQSLKGYLTGSIDVVLRVRDTTGVRYVVADWKTNWLGEREKPLTAADYSRTRMAEAMLH 1034

Query: 1005 SDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSW 1064
            SDYPLQALLY VVLHR+L WR  GYDPA HLGGVLYLFVRGMCGA TPVVDG P GVFSW
Sbjct: 1035 SDYPLQALLYCVVLHRFLRWRQPGYDPAKHLGGVLYLFVRGMCGASTPVVDGDPTGVFSW 1094

Query: 1065 EPPADLVVALSKLLDAEA 1082
             PPA L+VALS LLDA A
Sbjct: 1095 RPPASLIVALSDLLDAGA 1112


>tr|B2HSF6|B2HSF6_MYCMM Tax_Id=216594 (recB)SubName:
            Full=Exodeoxyribonuclease V (Beta chain),
            RecB;[Mycobacterium marinum]
          Length = 1110

 Score = 1329 bits (3440), Expect = 0.0
 Identities = 710/1107 (64%), Positives = 803/1107 (72%), Gaps = 29/1107 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M+ FDLLGPLPA N+TTVLEASAGTGKTFALA LVTR+VAEG A LD+MLLITFGRAASQ
Sbjct: 1    MRPFDLLGPLPAENSTTVLEASAGTGKTFALAALVTRYVAEGRARLDEMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEE--------YLVK---TDQQXXXXXXXXXXXX 109
            ELRERVR Q+V A+    D     +D +         +L+     ++             
Sbjct: 61   ELRERVRCQMVDAVRVFHDSRNGSDDADPAGDNQLLAHLLDGTAAERDARQQRLRDALAG 120

Query: 110  XXXXTIATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPE 169
                TIATTHQFCQ+VLKSLGVAGD+DAGVTLVE LD+LV+EIVDDLYL HFG  +DDP 
Sbjct: 121  FDAATIATTHQFCQLVLKSLGVAGDTDAGVTLVEDLDELVTEIVDDLYLVHFGRDRDDPP 180

Query: 170  LSYPEALKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDD 229
            L+Y +AL++AR VV NP+TQL        S AA+ + FA  VL ELE RKRRRG+LGYDD
Sbjct: 181  LTYRDALRIARAVVANPSTQLRPLDAPPGSRAAICVGFAHHVLEELETRKRRRGILGYDD 240

Query: 230  LLTRLADALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPK 289
            LL RLADAL  EDS AR RMQQRWP+VMVDEFQDTD VQWQVI+ AFSGR TL+LIGDPK
Sbjct: 241  LLLRLADALASEDSAARARMQQRWPVVMVDEFQDTDAVQWQVIDSAFSGRCTLILIGDPK 300

Query: 290  QAIYAFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDV 349
            QAIYAFRGGDI TYL AA TAGDK+TL TNWRSD ALVDRLQ VLRGA+LG P IVV DV
Sbjct: 301  QAIYAFRGGDIVTYLHAAQTAGDKRTLATNWRSDSALVDRLQVVLRGAELGDPAIVVRDV 360

Query: 350  QARHQGHRLVGAPRNDPFRLRVVSRKPGNTRVI---PIDQLRRHIGRDLAADISALLNSG 406
            +A HQGHRL GAP ND  RLRVV R     R I   PID LR HIGRDLA+DI ALL SG
Sbjct: 361  KAHHQGHRLAGAPHNDALRLRVVRRATLGRRGIQNLPIDILRDHIGRDLASDIGALLASG 420

Query: 407  ATWCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEA 466
            AT+  + +QA DIAVI E HKD               VYTGD+DVF+SEAA+DWL LLEA
Sbjct: 421  ATFAGRALQANDIAVIVEKHKDARACHRALTDAGIHAVYTGDTDVFSSEAADDWLALLEA 480

Query: 467  FDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAA 526
            FDQPHRPG+VRAAAATMFFG+TA  LA GGDALTDRVA+TLREWA +ARERGVAAIFEAA
Sbjct: 481  FDQPHRPGIVRAAAATMFFGKTANDLARGGDALTDRVAETLREWADYARERGVAAIFEAA 540

Query: 527  QLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXX 586
            QL GM  RVLSWQ G+R MTDLAH+TQLLQ  +HRE + L ALRDWLR Q          
Sbjct: 541  QLGGMSDRVLSWQEGQRHMTDLAHVTQLLQKVSHRERYTLPALRDWLRGQREDRGGATER 600

Query: 587  XXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----X 642
               +DSDAAAVQIMTVWVSKGLQ+PVVYLPFAFNR + E +LVLFHD G RCLH+     
Sbjct: 601  NRRIDSDAAAVQIMTVWVSKGLQYPVVYLPFAFNRNIQERELVLFHDGGTRCLHIGGKDS 660

Query: 643  XXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEA 702
                                LTYVA+TRAQSQVVAWW+P+YDEPNGGLSRL+RGR PG++
Sbjct: 661  PDFGTVERLGAKEAANDDSRLTYVAMTRAQSQVVAWWSPAYDEPNGGLSRLLRGRRPGDS 720

Query: 703  IVPDKCSPPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAI 762
            +VPD+ +P KI+DEDA +R + W+AAGGP +EESVI             +LA R+F R I
Sbjct: 721  VVPDRATPAKITDEDAWDRFQQWQAAGGPTVEESVIAAAPAIAGRPAPSELATRRFDRGI 780

Query: 763  DMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVV-APAEGADVPSPMAHLPT 821
            D+ W+RTSYSGL+R AE    GVSSEPEVTERDDE  ++P+      G + PSPMA LP+
Sbjct: 781  DIRWRRTSYSGLIRMAE--ATGVSSEPEVTERDDEVAEVPLTEVVMSGPEQPSPMADLPS 838

Query: 822  GAAFGSLVHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXX 881
            GA FGSLVHAVLET+DPFA DL AEL + I   S  WP             PMHD     
Sbjct: 839  GAKFGSLVHAVLETSDPFAIDLAAELESQIRVQSAWWPVQVPAAQLAAALVPMHDTPLGP 898

Query: 882  XXXXXXXRQIGLRDRLCELDFEFPMAGGDL--RGGRF--ARLSDVGELLREYLPADDPLA 937
                   RQIGL DRL E+DFEFP+AGGD    GG     RL+DVG LLR +L A DPLA
Sbjct: 899  LAGGLTLRQIGLPDRLREMDFEFPLAGGDEADAGGHAPDLRLADVGALLRAHLDASDPLA 958

Query: 938  VYAERLSTGILGVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADY 993
             YA+RLS   LG Q LRGYLSGSVDAVLR+    G+++++VDYKTNWLG  D  LTAADY
Sbjct: 959  PYADRLSGDALGGQSLRGYLSGSVDAVLRIPDGPGQRYLVVDYKTNWLGDPDRPLTAADY 1018

Query: 994  GRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPV 1053
             R R++EAMLHSDYPLQALLY VVLHR+L WR  GYDPA HLGGVLYLFVRGMCG  TP+
Sbjct: 1019 HRPRLIEAMLHSDYPLQALLYTVVLHRFLRWRQPGYDPARHLGGVLYLFVRGMCGPDTPM 1078

Query: 1054 VDGHPAGVFSWEPPADLVVALSKLLDA 1080
            +DGHPAGVFSW PPA LV ALS LLDA
Sbjct: 1079 LDGHPAGVFSWSPPAALVTALSDLLDA 1105


>tr|A0PLZ3|A0PLZ3_MYCUA Tax_Id=362242 (recB)SubName:
            Full=Exodeoxyribonuclease V (Beta chain),
            RecB;[Mycobacterium ulcerans]
          Length = 1110

 Score = 1320 bits (3417), Expect = 0.0
 Identities = 707/1107 (63%), Positives = 799/1107 (72%), Gaps = 29/1107 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M+ FDLLGPLPA N+TTVLEASAGTGKTFALA LVTR+VAEG A LD+MLLITFGRAASQ
Sbjct: 1    MRPFDLLGPLPAENSTTVLEASAGTGKTFALAALVTRYVAEGRARLDEMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEE--------YLVK---TDQQXXXXXXXXXXXX 109
            ELRERVR Q+V A+    D     +D +         +L+     ++             
Sbjct: 61   ELRERVRCQMVDAVRVFHDSRNGSDDADPAGDNQLLAHLLDGTAAERDARQQRLRDALAG 120

Query: 110  XXXXTIATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPE 169
                TIATTHQFCQ+VLKSLGVAGD+DAGVTLVE LD+LV+EIVDDLYL HFG  +DDP 
Sbjct: 121  FDAATIATTHQFCQLVLKSLGVAGDTDAGVTLVEDLDELVTEIVDDLYLVHFGRDRDDPP 180

Query: 170  LSYPEALKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDD 229
            L+Y +AL++AR VV NP+TQL        S AA  + FA  VL  LE RKRRRG+LGYDD
Sbjct: 181  LTYRDALRIARAVVANPSTQLRPLDAPPGSRAAACVGFAHHVLEGLETRKRRRGILGYDD 240

Query: 230  LLTRLADALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPK 289
            LL RLADAL  EDS AR RMQQRWP+VMVDEFQDTD VQWQVI+ AFSGR TL+LIGDPK
Sbjct: 241  LLLRLADALASEDSAARARMQQRWPVVMVDEFQDTDAVQWQVIDSAFSGRCTLILIGDPK 300

Query: 290  QAIYAFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDV 349
            QAIYAFRGGDI TYL AA TAGDK+TL TNWRSD ALVDRLQ VLRGA+LG P IVV DV
Sbjct: 301  QAIYAFRGGDIVTYLHAAQTAGDKRTLATNWRSDSALVDRLQVVLRGAELGDPAIVVRDV 360

Query: 350  QARHQGHRLVGAPRNDPFRLRVVSRKPGNTRVI---PIDQLRRHIGRDLAADISALLNSG 406
            +A HQGHRL GAP ND  RLRVV R     R I   PID LR HIGRDLA+DI ALL SG
Sbjct: 361  KAHHQGHRLAGAPHNDALRLRVVRRATLGRRGIQNLPIDILRDHIGRDLASDIGALLASG 420

Query: 407  ATWCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEA 466
            AT+  + +QA DIAVI E HKD               VYTGD+DVF+SEAA+DWL LLEA
Sbjct: 421  ATFAGRALQANDIAVIVEKHKDARACHRALTDAGIHAVYTGDTDVFSSEAADDWLALLEA 480

Query: 467  FDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAA 526
            FDQPHRPG+VRAAAATMFFG+TA  LA GGDALTDRVA+TLREWA +ARERGVAAIFEAA
Sbjct: 481  FDQPHRPGIVRAAAATMFFGKTANDLARGGDALTDRVAETLREWADYARERGVAAIFEAA 540

Query: 527  QLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXX 586
            QL GM  RVLSWQ G+R MTDLAH+TQLLQ  +HRE + L ALRDWLR Q          
Sbjct: 541  QLGGMSDRVLSWQEGQRHMTDLAHVTQLLQKVSHRERYTLPALRDWLRGQREDRGGATER 600

Query: 587  XXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV----X 642
               +DSDAAAVQIMTVWVSKGLQ+PVVYLPFAFNR + E +LVLFHD G RCLH+     
Sbjct: 601  NRRIDSDAAAVQIMTVWVSKGLQYPVVYLPFAFNRNIQERELVLFHDRGTRCLHIGGKDS 660

Query: 643  XXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEA 702
                                LTYVA+TRAQSQVVAWW+P+YDEPNGGLSRL+RGR PG++
Sbjct: 661  PDFGTVERLGAKEAANDDSRLTYVAMTRAQSQVVAWWSPAYDEPNGGLSRLLRGRRPGDS 720

Query: 703  IVPDKCSPPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAI 762
            +VPD+ +P KI+DEDA +R + W+AAGGP +EESVI             +LA R+F R I
Sbjct: 721  VVPDRATPAKITDEDAWDRFQQWQAAGGPTVEESVIAAAPAIAGQPAPSELATRRFDRDI 780

Query: 763  DMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVV-APAEGADVPSPMAHLPT 821
            D+ W+RTSYSGL+R AE    GVSSEPEVTERDDE  ++P+      G + PSPMA LP+
Sbjct: 781  DIRWRRTSYSGLIRMAE--ATGVSSEPEVTERDDEVAEVPLTEVVMSGPEQPSPMADLPS 838

Query: 822  GAAFGSLVHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXX 881
            GA FGSLVHAVLET+DPFA DL AEL + I   S  WP             PMHD     
Sbjct: 839  GAKFGSLVHAVLETSDPFAIDLAAELESQIRVQSAWWPVQVPAAQLAAALVPMHDTPLGP 898

Query: 882  XXXXXXXRQIGLRDRLCELDFEFPMAGGDL--RGGRF--ARLSDVGELLREYLPADDPLA 937
                   RQIGL DRL E+DFEFP+AGGD    GG     RL+DVG LLR +L A DPLA
Sbjct: 899  LAGGLTLRQIGLPDRLREMDFEFPLAGGDEADAGGHAPDLRLADVGALLRAHLDASDPLA 958

Query: 938  VYAERLSTGILGVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADY 993
             Y +RLS   LG Q LRGYLSGSVD VLR+    G+++++VDYKTNWLG  D  LTAADY
Sbjct: 959  PYDDRLSGDALGGQTLRGYLSGSVDVVLRIPDGPGQRYLVVDYKTNWLGDPDRPLTAADY 1018

Query: 994  GRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPV 1053
             R R++EAMLHSDYPLQALLY VVLHR+L WR  GYDPA HLGGVLYLFVRGMCG  TP+
Sbjct: 1019 HRPRLIEAMLHSDYPLQALLYTVVLHRFLRWRQPGYDPARHLGGVLYLFVRGMCGPDTPM 1078

Query: 1054 VDGHPAGVFSWEPPADLVVALSKLLDA 1080
            +DGHPAGVFSW PPA LV ALS LLDA
Sbjct: 1079 LDGHPAGVFSWSPPAALVTALSDLLDA 1105


>tr|A4T1L3|A4T1L3_MYCGI Tax_Id=350054 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Mycobacterium gilvum]
          Length = 1109

 Score = 1272 bits (3292), Expect = 0.0
 Identities = 691/1107 (62%), Positives = 790/1107 (71%), Gaps = 26/1107 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M+ FDLLG LP P TTTVLEASAGTGKTFALAGLVTR+VAEGVATLD+MLLITFGRAASQ
Sbjct: 1    MEPFDLLGALPEPRTTTVLEASAGTGKTFALAGLVTRYVAEGVATLDRMLLITFGRAASQ 60

Query: 61   ELRERVRAQIVAALVALDDPSR-ACNDLEEYLVKTDQQXXXXXXXXXXXXXXXX---TIA 116
            ELRERVR+QIV AL A DDP+    N++  +LV  D +                   TIA
Sbjct: 61   ELRERVRSQIVDALRAFDDPAAIGDNEVVRHLVTGDAEECDARRRRLRDALAGFDAATIA 120

Query: 117  TTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEAL 176
            TTHQFCQ+VL+SLGVAGD+D+GV LVESLDDLV+EIVDDLYLAHFG  +D+P L++  AL
Sbjct: 121  TTHQFCQLVLRSLGVAGDTDSGVELVESLDDLVAEIVDDLYLAHFGQDRDEPLLTHESAL 180

Query: 177  KLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLAD 236
            +LA  VVGN  T+L        S AAVR++FA+ V AELE RKR+ G+L YDDLL+RLAD
Sbjct: 181  RLAHAVVGNAHTELRPRDPAPGSDAAVRVEFAKAVCAELETRKRKLGILHYDDLLSRLAD 240

Query: 237  ALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFR 296
            ALE  DSPAR RMQ+RW IVMVDEFQDTDPVQWQVI+RAF G +TL+LIGDPKQAIYAFR
Sbjct: 241  ALEAPDSPARARMQRRWSIVMVDEFQDTDPVQWQVIDRAFRGHATLILIGDPKQAIYAFR 300

Query: 297  GGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGH 356
            GGDI TYL AAATAG ++TLGTN+RSD  LV+ LQAV+R AQLG P IVV  V A H+ H
Sbjct: 301  GGDIVTYLHAAATAGVQRTLGTNYRSDAPLVEGLQAVMRDAQLGDPRIVVRRVDAHHREH 360

Query: 357  RLVGAPRNDPFRLRVVSR---KPGNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQP 413
            RL GAP N+PFRLRV +R   +    R+IPID LR HI +D+AADI+ALLNSGAT C + 
Sbjct: 361  RLQGAPHNEPFRLRVCTRDQFRVRPDRMIPIDVLRNHIPKDMAADIAALLNSGATHCGEK 420

Query: 414  VQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRP 473
            +    IAVI E+H+D               VYTGDSDVF+S AA+DW+ LLEAFDQPHR 
Sbjct: 421  LAPGHIAVIVESHRDGHACFAALADAGIPAVYTGDSDVFSSPAADDWMCLLEAFDQPHRS 480

Query: 474  GLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGK 533
            GLVRAAA TMFFGETAE+LA  GD+LTDR+A+TLR+WA  ARERGVAA+FEAAQL GMG 
Sbjct: 481  GLVRAAATTMFFGETAEALALQGDSLTDRIAETLRQWADFARERGVAAVFEAAQLRGMGA 540

Query: 534  RVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQ---XXXXXXXXXXXXXL 590
            RVL W  GER MTDLAH+TQLL DTAHRE + L ALRDWLR Q                L
Sbjct: 541  RVLRWVDGERHMTDLAHLTQLLHDTAHREQYSLPALRDWLRAQRDDRGGLRGTVERNRRL 600

Query: 591  DSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHD----DGQ---RCLHV-- 641
            DSDAAAVQIMTVWVSKGLQFPVVYLPFAFNR V   D+V+FH+    DG    RCLH+  
Sbjct: 601  DSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRNVQPRDVVVFHEPATSDGAGDIRCLHIGG 660

Query: 642  --XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAP 699
                                   LTYVA+TRAQSQVVAWWAPS DE NGGLSRL+RGRAP
Sbjct: 661  ESSPDFAAVAQQARLEAAGDDVRLTYVAMTRAQSQVVAWWAPSRDELNGGLSRLLRGRAP 720

Query: 700  GEAIVPDKCSPPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFF 759
            G+ +VPD+C P +I D +A+ RLRAW   GGPV+EES+I              LA R F 
Sbjct: 721  GDPVVPDRCDPARIDDAEAMARLRAWADEGGPVLEESIIAERVEVELPAPPDTLAVRHFH 780

Query: 760  RAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFDDI--PVVAPA-EGADVPSPM 816
            R ID  W+RTSYSGL+RAAE    GV SEPEV E DDE  ++  P   PA    D+ SPM
Sbjct: 781  RRIDPLWRRTSYSGLIRAAEQES-GVGSEPEVVELDDEVAELRAPDTEPATPDVDMASPM 839

Query: 817  AHLPTGAAFGSLVHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHD 876
            A LP GA FG+LVHAVLETADPFA DL AEL   +  HS  WP             P+HD
Sbjct: 840  AGLPMGAKFGTLVHAVLETADPFAVDLAAELEAAVVEHSLWWPVDVPPAELAAALVPLHD 899

Query: 877  XXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGR-FARLSDVGELLREYLPADDP 935
                        R IGLRDRL E++FEFP+AGGD R       L+DVG LLR +LPADDP
Sbjct: 900  TPLGPLAPGVTLRDIGLRDRLREMEFEFPLAGGDRRDDTPDITLADVGRLLRAHLPADDP 959

Query: 936  LAVYAERLSTGILGVQPLRGYLSGSVDAVLRVGEKFVIVDYKTNWLGTGDGTLTAADYGR 995
            LA YA RL+TG L  QPL+GYL+GS+DAVLRV  ++++VDYKTNWLG   G LTAADY  
Sbjct: 960  LAPYAARLTTGALAGQPLKGYLNGSLDAVLRVDGRYLVVDYKTNWLGDPAGELTAADYAP 1019

Query: 996  RRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVD 1055
             R+ EAMLHSDYPLQALLY VVLHR+L WR  GY    H+ GVLYLFVRGMCG  TPV+D
Sbjct: 1020 ARLAEAMLHSDYPLQALLYCVVLHRFLRWRQPGYSARRHIAGVLYLFVRGMCGPDTPVLD 1079

Query: 1056 GHPAGVFSWEPPADLVVALSKLLDAEA 1082
            GHPAGVFSW+PPA L+  LS LLDA A
Sbjct: 1080 GHPAGVFSWQPPAALIEELSDLLDAGA 1106


>tr|D5YNS9|D5YNS9_MYCTU Tax_Id=515616 SubName: Full=Exonuclease
            subunit V beta recB;[Mycobacterium tuberculosis 02_1987]
          Length = 1094

 Score = 1197 bits (3096), Expect = 0.0
 Identities = 657/1096 (59%), Positives = 757/1096 (69%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID+ W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDITWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>sp|P96920|EX5B_MYCTU Tax_Id=1773 (recB)RecName:
            Full=Exodeoxyribonuclease V beta chain;
            EC=3.1.11.5;[Mycobacterium tuberculosis]
          Length = 1094

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 657/1096 (59%), Positives = 756/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|C6DU07|C6DU07_MYCTK Tax_Id=478434 SubName: Full=Exonuclease
            subunit V beta recB;[Mycobacterium tuberculosis]
          Length = 1094

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 657/1096 (59%), Positives = 756/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|A5WJZ5|A5WJZ5_MYCTF Tax_Id=336982 SubName: Full=Exonuclease V beta
            subunit recB;[Mycobacterium tuberculosis]
          Length = 1094

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 657/1096 (59%), Positives = 756/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|A5U013|A5U013_MYCTA Tax_Id=419947 (recB)SubName:
            Full=Exodeoxyribonuclease V subunit beta;[Mycobacterium
            tuberculosis]
          Length = 1094

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 657/1096 (59%), Positives = 756/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|D6FZS7|D6FZS7_MYCTU Tax_Id=478435 SubName: Full=Exonuclease
            subunit V beta recB;[Mycobacterium tuberculosis KZN 605]
          Length = 1094

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 657/1096 (59%), Positives = 756/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|D5Y0V3|D5Y0V3_MYCTU Tax_Id=520141 SubName: Full=Exonuclease
            subunit V beta;[Mycobacterium tuberculosis T85]
          Length = 1094

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 657/1096 (59%), Positives = 756/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|D6FME1|D6FME1_MYCTU Tax_Id=611304 SubName: Full=Exonuclease
            subunit V beta recB;[Mycobacterium tuberculosis K85]
          Length = 1094

 Score = 1194 bits (3089), Expect = 0.0
 Identities = 656/1096 (59%), Positives = 755/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +     AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVFAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|D6FED6|D6FED6_MYCTU Tax_Id=611303 SubName: Full=Exonuclease
            subunit V beta recB;[Mycobacterium tuberculosis CPHL_A]
          Length = 1094

 Score = 1194 bits (3089), Expect = 0.0
 Identities = 656/1096 (59%), Positives = 755/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
             P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +     AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVFAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|D6F1P0|D6F1P0_MYCTU Tax_Id=611302 SubName:
            Full=Exodeoxyribonuclease V, beta subunit;[Mycobacterium
            tuberculosis T46]
          Length = 1094

 Score = 1192 bits (3084), Expect = 0.0
 Identities = 656/1096 (59%), Positives = 755/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
              +++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -LRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|D5YCX1|D5YCX1_MYCTU Tax_Id=520140 SubName: Full=Exonuclease
            subunit V beta;[Mycobacterium tuberculosis EAS054]
          Length = 1094

 Score = 1192 bits (3084), Expect = 0.0
 Identities = 656/1096 (59%), Positives = 755/1096 (68%), Gaps = 25/1096 (2%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1    MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61   ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
            ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61   ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121  THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181  LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238  LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
            LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241  LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298  GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
            GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301  GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358  LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
            L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361  LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415  QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
             A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421  VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481  LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541  VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
            AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601  AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661  GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
              +++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721  -LRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYS L+R +E   V V+SEP    R DE +   V AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780  SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHW----PXXXXXXXXXXXXXPMHDXXXXXXXXX 885
            HAVLETADP A DL AEL   +  H+  W                  PMHD         
Sbjct: 838  HAVLETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAA 897

Query: 886  XXXRQIGLRDRLCELDFEFPMAGGDLRG-GRFARLSDVGELLREYLPADDPLAVYAERLS 944
               RQIG+RDRL ELDFE P+AGGDLRG      L+DVGELL  +LP DDPL+ YA+RL 
Sbjct: 898  LTLRQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLG 957

Query: 945  TGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAML 1003
            +  LG QPLRGYL+GS+D VLR+ G+++++VDYKTN LG      TAADYG  R+ EAML
Sbjct: 958  SAGLGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGD-----TAADYGFERLTEAML 1012

Query: 1004 HSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFS 1063
            HSDYPLQALLY VVLHR+L WR   Y PA HLGGVLYLFVRGMCGA TPV  GHPAGVF+
Sbjct: 1013 HSDYPLQALLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFT 1072

Query: 1064 WEPPADLVVALSKLLD 1079
            W PP  LVVALS LLD
Sbjct: 1073 WNPPTALVVALSDLLD 1088


>tr|D2PR47|D2PR47_KRIFD Tax_Id=479435 SubName:
            Full=Exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Kribbella flavida]
          Length = 1098

 Score = 1178 bits (3048), Expect = 0.0
 Identities = 646/1097 (58%), Positives = 752/1097 (68%), Gaps = 21/1097 (1%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            M  FDLLGPLP    TTVLEASAGTGKT+ALAGLVTR+VAEG A LD+MLLITFGRAASQ
Sbjct: 1    MDAFDLLGPLPTG--TTVLEASAGTGKTYALAGLVTRYVAEGAARLDEMLLITFGRAASQ 58

Query: 61   ELRERVRAQIVAALVALDDPSRACND--LEEYLVK---TDQQXXXXXXXXXXXXXXXXTI 115
            ELRERVR Q++ A  AL  P    ND  L  +LV     +                  TI
Sbjct: 59   ELRERVRCQLLEAEQALAAPEPWRNDPGLLGHLVDGSAAELAVRHGRLRDALATFDAATI 118

Query: 116  ATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEA 175
            ATTHQFCQ+VL+SLGVAGD+DAGVTLVE L DLV+E+VDDLYL  F G  + P ++   A
Sbjct: 119  ATTHQFCQLVLRSLGVAGDTDAGVTLVEDLTDLVAEVVDDLYLNLFAGSAEPPPITRATA 178

Query: 176  LKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLA 235
            L+LA  VVGNP T+L        SP  VR++FA+ VLAE+E RKRR GVLGYDDLLTRLA
Sbjct: 179  LELALKVVGNPHTRLVPEKYAEASPEGVRVEFAKAVLAEVERRKRRLGVLGYDDLLTRLA 238

Query: 236  DALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAF 295
             ALE   +PAR RMQ+RW +VMVDEFQDTDPVQW+VI+ AF+G STLVLIGDPKQAIYAF
Sbjct: 239  VALEDPTAPARRRMQRRWSVVMVDEFQDTDPVQWKVIDAAFNGHSTLVLIGDPKQAIYAF 298

Query: 296  RGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQG 355
            RGGDIATYL AAATAG ++TLGTNWRSD+ LVD LQ VL GA+LG  DIVVH V A HQG
Sbjct: 299  RGGDIATYLTAAATAGQRRTLGTNWRSDQPLVDCLQVVLGGARLGHEDIVVHPVDAHHQG 358

Query: 356  HRLVGAPRNDPFRLRVVSRKPGNT---RVIPIDQLRRHIGRDLAADISALLNSGATWCDQ 412
             RL GAP + PFRLRV  R    +   + IP+D+LR HI RDLAADI  LL +GAT+  +
Sbjct: 359  SRLAGAPCDAPFRLRVALRDQFGSAARKNIPMDELRDHITRDLAADIGQLLAAGATYAGR 418

Query: 413  PVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHR 472
            P++A DIAVI E HKD               VY+GD D+F+S+AA+DWL LLEAF+QPHR
Sbjct: 419  PLRAGDIAVIVEAHKDARACREALAQAGIPAVYSGDLDIFSSQAAQDWLCLLEAFEQPHR 478

Query: 473  PGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMG 532
             GLVRAAA TMFFGETA SL AGG+ LTDR+  TLR WA H R +GVAA+FEAAQL GM 
Sbjct: 479  SGLVRAAATTMFFGETAASLHAGGEELTDRIGQTLRAWADHLRAKGVAAVFEAAQLKGMA 538

Query: 533  KRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDS 592
             RVL+W+GGER +TDLAH+ +LL +TAHREGFGL AL DWLR +             LDS
Sbjct: 539  DRVLAWRGGERDLTDLAHLAELLHETAHREGFGLPALLDWLRQECTGKGRTTERTRRLDS 598

Query: 593  DAAAVQIMTVWVSKGLQFPVVYLPFAFNRYV-PEPDLVLFHDDGQRCLHV----XXXXXX 647
            D AAVQIMTVWVSKGLQ+PVVYLPF FNR++  E +L+LFH+DG R L +          
Sbjct: 599  DVAAVQIMTVWVSKGLQYPVVYLPFGFNRHIYDEDELLLFHEDGVRSLDIGGRKRAEYRA 658

Query: 648  XXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDK 707
                           LTYVALTRAQSQVVAWWAPS+DE NGG+SRL+RGR  G+ +VPD+
Sbjct: 659  NEKRWRAEVAGDDIRLTYVALTRAQSQVVAWWAPSWDEVNGGISRLLRGRKQGDPVVPDQ 718

Query: 708  CSPPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWK 767
               P  SDE+ L  LR W+ AGGPV+E+S I              L    F R +D+ W+
Sbjct: 719  LDRPS-SDEEVLVWLRRWQQAGGPVVEQSAIAEHVEPVAEQLPGGLRVATFSREVDLTWR 777

Query: 768  RTSYSGLLRAAETAGVGVSSEPEVTE-RDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFG 826
            RTSYSGL+R AE    GV+SE E ++  D+  D +P+ A A    +PSPM   P GA FG
Sbjct: 778  RTSYSGLVRDAEQQSAGVASEHEESQLADESVDPVPMPAAAAPDALPSPMEGFPVGATFG 837

Query: 827  SLVHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXX 886
            SLVHAVLE ADP A DL AELA  I      W              PMH           
Sbjct: 838  SLVHAVLEEADPHAADLHAELAGRIREQLPFWRVDATPDALATAMLPMHATPLGPLVPGL 897

Query: 887  XXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTG 946
              R +G  DRL ELDFE P+AGGD    R  RL+++  LLR +LPADDPL  YA+RL   
Sbjct: 898  TLRDLGRGDRLRELDFEIPLAGGDRAAPREVRLAELAPLLRAHLPADDPLLAYADRLEQP 957

Query: 947  ILGVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAM 1002
            +LG Q LRGYL+GS+D VLRV      +FV+VDYKTN LG  D   T+A YGR ++  AM
Sbjct: 958  LLGGQSLRGYLTGSIDVVLRVPDGGSHRFVVVDYKTNRLGDPDQPATSAQYGRDQLGAAM 1017

Query: 1003 LHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVF 1062
            LHSDYPLQALLY+VVLHRYL WRL GY P THLGGV+YL++RGMCG  TPVVDGHPAGVF
Sbjct: 1018 LHSDYPLQALLYSVVLHRYLRWRLPGYAPETHLGGVVYLYLRGMCGPETPVVDGHPAGVF 1077

Query: 1063 SWEPPADLVVALSKLLD 1079
            SW  P+ LVVALS LLD
Sbjct: 1078 SWSLPSALVVALSDLLD 1094


>tr|Q7U1L0|Q7U1L0_MYCBO Tax_Id=1765 (recBa)SubName: Full=PROBABLE
           EXONUCLEASE V (BETA CHAIN) RECBA [FIRST PART]
           (EXODEOXYRIBONUCLEASE V BETA CHAIN)(EXODEOXYRIBONUCLEASE
           V POLYPEPTIDE); EC=3.1.11.5;[Mycobacterium bovis]
          Length = 897

 Score =  941 bits (2431), Expect = 0.0
 Identities = 518/862 (60%), Positives = 597/862 (69%), Gaps = 14/862 (1%)

Query: 1   MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
           M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1   MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61  ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
           ELRERVR QIV AL AL   +    +L E+L++    ++                 TIAT
Sbjct: 61  ELRERVRGQIVEALGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118 THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
           TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121 THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178 LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
           LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181 LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238 LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
           LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241 LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298 GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
           GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301 GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358 LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
           L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361 LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415 QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
            A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421 VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475 LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
           LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481 LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535 VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
           VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541 VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595 AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
           AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601 AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650 XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                        LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661 GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710 PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
            P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721 -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770 SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
           SYS L+R +E   V V+SEP    R DE +     AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780 SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVFAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830 HAVLETADPFAEDLTAELATHI 851
           HAVLETADP A DL AEL   +
Sbjct: 838 HAVLETADPAAPDLAAELEAQV 859


>tr|C1AKW1|C1AKW1_MYCBT Tax_Id=561275 (recBa)SubName: Full=Putative
           exonuclease V subunit beta; EC=3.1.11.5;[Mycobacterium
           bovis]
          Length = 897

 Score =  939 bits (2426), Expect = 0.0
 Identities = 517/862 (59%), Positives = 596/862 (69%), Gaps = 14/862 (1%)

Query: 1   MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
           M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1   MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61  ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
           ELRERVR QIV AL AL   +    +L E+L++    ++                 TIAT
Sbjct: 61  ELRERVRGQIVEALGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118 THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
           TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121 THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178 LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
           LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181 LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238 LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
           LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241 LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298 GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
           GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301 GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358 LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
           L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361 LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415 QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
            A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421 VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475 LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
           LVRAAA TMFFGETAESLAA GDALTDRVA TL EWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481 LVRAAACTMFFGETAESLAAEGDALTDRVAGTLHEWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535 VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
           VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541 VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595 AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
           AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601 AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650 XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                        LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661 GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710 PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
            P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721 -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770 SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
           SYS L+R +E   V V+SEP    R DE +     AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780 SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVFAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830 HAVLETADPFAEDLTAELATHI 851
           HAVLETADP A DL AEL   +
Sbjct: 838 HAVLETADPAAPDLAAELEAQV 859


>tr|A1KGA8|A1KGA8_MYCBP Tax_Id=410289 (recBa)SubName: Full=Probable
           exonuclease V (Beta chain) recBa [first part];
           EC=3.1.11.5;[Mycobacterium bovis]
          Length = 897

 Score =  939 bits (2426), Expect = 0.0
 Identities = 517/862 (59%), Positives = 596/862 (69%), Gaps = 14/862 (1%)

Query: 1   MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
           M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1   MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61  ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
           ELRERVR QIV AL AL   +    +L E+L++    ++                 TIAT
Sbjct: 61  ELRERVRGQIVEALGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118 THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
           TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121 THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178 LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
           LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181 LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238 LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
           LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241 LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298 GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
           GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301 GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358 LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
           L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361 LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415 QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
            A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421 VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475 LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
           LVRAAA TMFFGETAESLAA GDALTDRVA TL EWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481 LVRAAACTMFFGETAESLAAEGDALTDRVAGTLHEWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535 VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
           VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541 VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595 AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
           AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601 AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650 XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                        LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661 GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710 PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
            P+++DE A      WEAAGGP +EESVIG                R F R ID  W+RT
Sbjct: 721 -PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRT 779

Query: 770 SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
           SYS L+R +E   V V+SEP    R DE +     AP  GAD+ SP+A LP+GA+FGSLV
Sbjct: 780 SYSDLVRGSE--AVTVTSEPAAGGRADEVEIAVFAAPGSGADLTSPLAALPSGASFGSLV 837

Query: 830 HAVLETADPFAEDLTAELATHI 851
           HAVLETADP A DL AEL   +
Sbjct: 838 HAVLETADPAAPDLAAELEAQV 859


>tr|A1SDB2|A1SDB2_NOCSJ Tax_Id=196162 SubName:
            Full=Exodeoxyribonuclease V, beta subunit;[Nocardioides
            sp.]
          Length = 1111

 Score =  894 bits (2310), Expect = 0.0
 Identities = 534/1120 (47%), Positives = 655/1120 (58%), Gaps = 52/1120 (4%)

Query: 1    MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
            ++ F +  PLPA   T +LEASAGTGKT+ +  L+TR+VAEGVA LDQ+L++TFGRAASQ
Sbjct: 4    VRPFAITDPLPAG--TVLLEASAGTGKTWTIGALLTRYVAEGVARLDQLLVVTFGRAASQ 61

Query: 61   ELRERVRAQIVAALVALDD---------PSRACNDLEEYLVKT-------DQQXXXXXXX 104
            ELRERVRAQ+V A   L D         P    +  +  LV         +++       
Sbjct: 62   ELRERVRAQLVEAERVLGDDPVAGDSGDPGDPGDPGDSELVTLLRSWGADERRRGHRRVT 121

Query: 105  XXXXXXXXXTIATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQ 164
                     TIATTHQFC +VL SLGVAGD+D+   LVE LDDLV E VDDLYL  F   
Sbjct: 122  EALAGFDAATIATTHQFCSMVLDSLGVAGDTDSRARLVEDLDDLVKETVDDLYLRAFADA 181

Query: 165  KDDPELSYPEALKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGV 224
              +P  ++ EA+ +AR  VG+P  +L        + A  ++ FA  V  EL+ RKRR G+
Sbjct: 182  --EPAFTHDEAMAIARAAVGDPQARLEPAGADRSTIAGRKVSFADAVRTELDRRKRRLGI 239

Query: 225  LGYDDLLTRLADALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVL 284
            L YDDLL++LADAL    S A  RM+ RW IV+VDEFQDTDPVQW+V++RAFSG +T+VL
Sbjct: 240  LSYDDLLSQLADALAQPGSAAAQRMRARWRIVLVDEFQDTDPVQWEVLDRAFSGHATMVL 299

Query: 285  IGDPKQAIYAFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDI 344
            IGDPKQAIYAFRGGD+ TYLRAA TA  +QTL  N RSD  L+  +Q +L GA+LG   I
Sbjct: 300  IGDPKQAIYAFRGGDVTTYLRAAETAQTRQTLAVNRRSDGPLLAAVQTLLAGAELGDERI 359

Query: 345  VVHDVQARHQGHRLVGAPRNDPFRLRVVSRKPGNTR---VIPIDQLRRHIGRDLAADISA 401
            VVHDV A H   RL GAP   PFRLRVV R     R    + + Q+R H+ RDLA D+  
Sbjct: 360  VVHDVTAHHGESRLAGAPVPHPFRLRVVRRDTFGRRGGSTLTVGQVRPHVARDLALDVRR 419

Query: 402  LLNSGATWCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWL 461
            LL SGATWC +P++ +D+AVI+  H D               V  G   VF + AA +WL
Sbjct: 420  LLASGATWCGEPIRPRDVAVISYRHADLATVREALLEVGVPAVIAGGGSVFATPAAIEWL 479

Query: 462  YLLEAFDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAA 521
             LLEA +QPHR   VR+AA T FFG TA  L A GD LTD VADTLR W      RG+AA
Sbjct: 480  TLLEALEQPHRSTRVRSAALTCFFGHTAVELDARGDDLTDEVADTLRGWVELFAGRGLAA 539

Query: 522  IFEAAQLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQ--XXX 579
            + EAA +AG+ +RVL+  GG+R +TDL H+ + L +       GL +L  WLR Q     
Sbjct: 540  VLEAANVAGLPERVLAEIGGDRRLTDLRHIGEALHEVTLVARHGLPSLLTWLRGQVTEGR 599

Query: 580  XXXXXXXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDD-GQRC 638
                      LDSDAAAVQ++T+  SKGL++PVVY+P   +R+VP+P   LFHDD G RC
Sbjct: 600  AGRGVERTRRLDSDAAAVQLVTIHASKGLEYPVVYVPALADRFVPKPTRPLFHDDGGTRC 659

Query: 639  LHV-----XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRL 693
            L V                          L YVA TRA+SQVVAWWAP+ +     L R+
Sbjct: 660  LDVGGARSDDGWADHCRRWADEEAGEWLRLLYVATTRAKSQVVAWWAPTKNAVASPLHRM 719

Query: 694  MR--GRAPGEAIVPDKCSPPKISDEDALERL-RAWEAAGGPVIEESVIGXXXXXXXXXXX 750
            +   G  P   +     + P + D+DA+  L   W   GGP  E ++             
Sbjct: 720  LMRDGDGPDGEMSASVPAAPAVPDDDAVVTLFSRWRERGGPSPEAAIHADPGADPPRPAT 779

Query: 751  XDLAARKFFRAIDMAWKRTSYSGLLRAAETAGVG-VSSEPEVTERDDEF---DDIPVVAP 806
             DLAAR F R ID  W+R SYS L R    A  G V SEPE+T ++DE    + +P VAP
Sbjct: 780  PDLAARTFTRTIDTEWRRASYSSLSRVEVAAPAGAVVSEPEITGKEDEALAPEAVP-VAP 838

Query: 807  AEGADVPSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXX 866
               +DVPSPMA LP GA FGSLVHAVLE  DP A DL AEL  HID     WP       
Sbjct: 839  LLASDVPSPMAGLPVGATFGSLVHAVLEHTDPEAVDLRAELLGHIDEQLGWWPVDLDREE 898

Query: 867  XXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGELL 926
                   + D            RQ+ L DRL E++FE P+  G         L D+  LL
Sbjct: 899  LADALVAVCDSPLGPLAAGTTLRQVTLGDRLREMEFELPLGDG--------LLGDLRPLL 950

Query: 927  REYLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLG 982
              +LP  DP+  Y   L  G LG Q LRGYL+GSVD VLR+    G ++++VDYKTNWLG
Sbjct: 951  ERHLPPGDPVRAYTAHLD-GPLGEQTLRGYLTGSVDVVLRLRSEAGPRYLVVDYKTNWLG 1009

Query: 983  TGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLF 1042
              D  LTA  Y    +  AM HSDYPLQALLY  VLHR+L WR  GYDP  HLGGVLYL+
Sbjct: 1010 PTDEPLTAHSYASVALDAAMGHSDYPLQALLYVAVLHRFLRWRQPGYDPEQHLGGVLYLY 1069

Query: 1043 VRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDAEA 1082
            +RGMCG  TP VDG P GVF+W PP  LV  LS LLD  A
Sbjct: 1070 LRGMCGPDTPSVDGAPCGVFAWRPPVALVEELSDLLDGGA 1109


>tr|C8XGW9|C8XGW9_NAKMY Tax_Id=479431 SubName:
            Full=Exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Nakamurella multipartita]
          Length = 1139

 Score =  850 bits (2195), Expect = 0.0
 Identities = 524/1137 (46%), Positives = 648/1137 (56%), Gaps = 68/1137 (5%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FD  GPLP    TT+LEASAGTGKT A+  LVTR++AEGVA  DQ+L+ITFGRAASQELR
Sbjct: 12   FDACGPLP--RGTTLLEASAGTGKTHAIGDLVTRYIAEGVARPDQLLVITFGRAASQELR 69

Query: 64   ERVRAQIVAALVALDDPSRA----------------CNDLEEYLVKTDQQXXXXXXXXXX 107
            ERVR  +V A  AL DP+ A                 +D++E  V   +           
Sbjct: 70   ERVRDHLVRAERALADPAAARAGADPVHALLAGGPGAHDVDEAQVGRRRDRLRAALAGYD 129

Query: 108  XXXXXXTIATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDD 167
                  TI TTHQFCQ VL  LGVAGD+D  V LV++LDDL+ ++VDDLY+A F  +   
Sbjct: 130  AS----TILTTHQFCQFVLTGLGVAGDADPDVELVDTLDDLIVQVVDDLYIAAFARRDLP 185

Query: 168  PELSYPEALKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGY 227
            P      AL LAR VV +P   L        SPA  R+KF + V  E+E RKR+R +LGY
Sbjct: 186  PVFDRDTALALARRVVDDPQALLAPPDPDPISPANWRIKFGQRVRREVEERKRQRRILGY 245

Query: 228  DDLLTRLADALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGD 287
            DDLL RLA AL P D+PAR RM++RW  V+VDEFQDTDPVQWQ+++RAFSG +T+VLIGD
Sbjct: 246  DDLLGRLATALAPADAPARERMRRRWSFVLVDEFQDTDPVQWQILDRAFSGHATMVLIGD 305

Query: 288  PKQAIYAFRGGDIATYLRAAATAGD-KQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVV 346
            PKQ+IYAFRGGD+ TYL AA TAG  + TL  NWR+D  LV  LQ +L    LG P+IVV
Sbjct: 306  PKQSIYAFRGGDVPTYLAAAHTAGPARATLDRNWRTDPPLVTALQVLLHELTLGSPEIVV 365

Query: 347  HDVQARHQGHRLVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALL 403
              V +   G RL GAP   P RLRV+ R     G   +IPID+ R  I RDLAAD++ LL
Sbjct: 366  RPVVSALPGPRLHGAPSAAPLRLRVLRRDQVNCGAGELIPIDRARELIARDLAADLAELL 425

Query: 404  NSGATWCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYL 463
             +GAT+  +P+QA  +AVI  THK                V  G S VF +EAA+ W+ L
Sbjct: 426  GAGATFDHKPLQAGHVAVIVGTHKQARTVQTALIRVGIPAVVAGSSSVFQTEAADQWVTL 485

Query: 464  LEAFDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIF 523
            LEA +QPHR   VRAAA T F G +A  LAA G+  TD ++  +  WAG    RGVAA+ 
Sbjct: 486  LEALEQPHRAARVRAAALTAFVGWSAADLAARGEEATDELSVLISGWAGVLATRGVAALL 545

Query: 524  EAAQL-AGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQ--XXXX 580
            E   +  G+  RVL   GGERL+TDL H+ QLLQ  A ++  G+AAL +WLR +      
Sbjct: 546  EVVGVETGLPARVLGRVGGERLLTDLRHVGQLLQTAAVQDSLGVAALAEWLRRRRADDRL 605

Query: 581  XXXXXXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNR-YVPEPDLVLFHDDGQRCL 639
                     L++DAAA Q++T+  SKGLQ+PVVYLPFAF+R Y  EPD++L H DG R L
Sbjct: 606  DVTADRVRRLETDAAACQVVTLHASKGLQYPVVYLPFAFDRWYNDEPDVLLLHQDGHRVL 665

Query: 640  HVXXXXXXXXXXXXXXXXXXXXXLT----YVALTRAQSQVVAWWAPSYDEPNGGLSRLMR 695
             +                           YV LTRAQSQVV WWAP+ +    GL R++ 
Sbjct: 666  DIGGPDTPGRGRRRDQALAEEAGEALRHLYVGLTRAQSQVVTWWAPTKNTRTSGLHRVLF 725

Query: 696  GRAPGEAIVPDKCSPPKISDEDALERLRAWEAAGGPVIEE-SVIGXXXXXXXXXXXXDLA 754
            G    +  VPD    P  SDE A  RL  W+  G  V+E+  V              +LA
Sbjct: 726  GDRDFDGGVPDSVKVP--SDEAARTRLDGWQQRGALVLEQVGVSAARPPAADAPRPDELA 783

Query: 755  ARKFFRAIDM-AWKRTSY--------SGLLRAAETAGV----GVSSEPEVTERDDEFDDI 801
                 R +++  W+R SY        SGLL  A+   V    GV SEPE  E  DE  D 
Sbjct: 784  VAVLHRDLELQRWRRVSYSSLSAAGSSGLLIGADAGPVAGDLGVGSEPEHPELADE--DG 841

Query: 802  PVVAPAEGAD-----------VPSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATH 850
             + APA   D             SPMA LP GA FG+LVHAV ET DP A DL A++   
Sbjct: 842  ALAAPAGAPDPVADPMAALRATLSPMADLPVGATFGTLVHAVFETTDPRAADLPAQVRAR 901

Query: 851  IDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGD 910
                                  P+                +G RDRL EL+FE P+AGGD
Sbjct: 902  CAEQVARVGFPLDPDTLAAALVPVLRTSLGPLAGGLTLADLGTRDRLTELEFELPLAGGD 961

Query: 911  LRGGRFAR--LSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV- 967
               G      L D+  ++R +LPA DPLA YA+RL+       PLRGYL+GS+DAVLR+ 
Sbjct: 962  RAAGPVPDLVLGDLAPVIRRHLPAADPLAGYADRLAAPSFAELPLRGYLTGSLDAVLRLP 1021

Query: 968  GEKFVIVDYKTNWLGTGD--GTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWR 1025
            G ++++ DYKTNWLG  D    L+  DY    M  AM  SDYPLQA+LY V LHR+L WR
Sbjct: 1022 GPRYLVADYKTNWLGDFDSGAPLSLWDYRPAAMDAAMAGSDYPLQAMLYTVALHRFLRWR 1081

Query: 1026 LSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDAEA 1082
              GY P  H+ GVLYLFVRGM G  TP +DG P GVF W PP +L+ A+S LLD  A
Sbjct: 1082 QPGYHPGRHIAGVLYLFVRGMAGPDTPEIDGRPCGVFGWAPPVELITAVSDLLDGTA 1138


>tr|D5XQQ7|D5XQQ7_MYCTU Tax_Id=515617 SubName: Full=Exonuclease V
           beta subunit recB;[Mycobacterium tuberculosis T92]
          Length = 799

 Score =  841 bits (2173), Expect = 0.0
 Identities = 461/750 (61%), Positives = 531/750 (70%), Gaps = 12/750 (1%)

Query: 1   MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
           M  F+LLGPLP   TTTVLEASAGTGK FALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1   MDRFELLGPLPREGTTTVLEASAGTGKPFALAGLVTRYLAETDATLDEMLLITFNRAASR 60

Query: 61  ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
           ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61  ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118 THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
           TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121 THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178 LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
           LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181 LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238 LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
           LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241 LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298 GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
           GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301 GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358 LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
           L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361 LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415 QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
            A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421 VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475 LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
           LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481 LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535 VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
           VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541 VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595 AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV-----XXXXXXXX 649
           AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++             
Sbjct: 601 AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE 660

Query: 650 XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                        LTYVALTRAQSQVVAWWAP++DE NGGLSRL+RGR PG++ VPD+C+
Sbjct: 661 GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT 720

Query: 710 PPKISDEDALERLRAWEAAGGPVIEESVIG 739
             +++DE A      WEAAGGP +EESVIG
Sbjct: 721 -LRVTDEQAWAVFAQWEAAGGPSVEESVIG 749


>tr|D5ZD19|D5ZD19_MYCTU Tax_Id=537210 SubName: Full=Exonuclease
           subunit V beta recB;[Mycobacterium tuberculosis T17]
          Length = 906

 Score =  752 bits (1941), Expect = 0.0
 Identities = 409/647 (63%), Positives = 468/647 (72%), Gaps = 6/647 (0%)

Query: 1   MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
           M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1   MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61  ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
           ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61  ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118 THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
           TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121 THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178 LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
           LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181 LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238 LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
           LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241 LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298 GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
           GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301 GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358 LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
           L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361 LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415 QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
            A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421 VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475 LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
           LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HAR RGVAA+F+AAQLAGMG+R
Sbjct: 481 LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR 540

Query: 535 VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
           VLS +GGER +TDLAH+ QLL + AHRE  GL  LRDWLR Q             LDSDA
Sbjct: 541 VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA 600

Query: 595 AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHDDGQRCLHV 641
           AAVQIMTV+V+KGLQFP+VYLPFAFNR V   D++L+HDDG RCL++
Sbjct: 601 AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYI 647


>tr|C0ZQ88|C0ZQ88_RHOE4 Tax_Id=234621 (recB)SubName:
            Full=Exodeoxyribonuclease V beta chain;
            EC=3.1.11.5;[Rhodococcus erythropolis]
          Length = 1105

 Score =  735 bits (1897), Expect = 0.0
 Identities = 477/1111 (42%), Positives = 596/1111 (53%), Gaps = 58/1111 (5%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDLLGPLP    TTVLEASAGTGKT+A+ GL TR VAEG+A + Q+LL+TF RAA+QELR
Sbjct: 3    FDLLGPLPTG--TTVLEASAGTGKTYAIVGLATRCVAEGLADISQVLLVTFSRAATQELR 60

Query: 64   ERVRAQIVAALVALDDPS---RACNDLEEYLVKTDQQXXXXXXXXXXXXXXXX---TIAT 117
            ER R +      AL DP    R+ +DL  YL   D +                   TI T
Sbjct: 61   ERARERFAGVSAALVDPEAARRSDDDLVAYLATADDEEIGVRRRRLLRALAEFDAGTITT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH FCQ +L  LG+AG+ +   T VES+DDL+SE+V DLYL+ +      P  S  +AL 
Sbjct: 121  THSFCQRMLDGLGIAGEREPDTTFVESVDDLISEVVSDLYLSRYSRTDSSPPFSTKDALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            +AR+ VG+    L        +P   R+ FA     E+E RKR +G+  ++DLLT L   
Sbjct: 181  IARIAVGDGQAILEPDGEEETAPGQ-RVLFAAAARLEVERRKRTKGIRDFNDLLTLLHGV 239

Query: 238  L-EPEDSPARVR-MQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAF 295
            L +PE  P   R +++++ +V++DEFQDTDP+QW ++  AF G +TLVL+GDPKQAIYAF
Sbjct: 240  LTDPEYGPVACRRVREKFKVVLIDEFQDTDPLQWDILRLAFHGHTTLVLVGDPKQAIYAF 299

Query: 296  RGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQG 355
            RG ++ +YL A   A   Q L TNWRSD  L+  L+ +  GA LG   IV H V+A H+ 
Sbjct: 300  RGAEVLSYLDAVDQADAHQELTTNWRSDPGLLAALEHLYGGAALGNEGIVAHPVEASHKK 359

Query: 356  HRLVGAPRNDPFRLRVVSRK---PGNTRVIP-IDQLRRHIGRDLAADISALLNSGATWC- 410
             RL G     P R+R + R    P N    P + +LR  +  D+AAD+  LL S A    
Sbjct: 360  SRLSGPV---PMRVRHLPRTGAGPLNRSGFPAVGRLRSRVADDVAADVVGLLGSDARLAV 416

Query: 411  ---DQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAF 467
                +PV+  D+AV+  THK                V TG S VF + +A  WL+LL+A 
Sbjct: 417  DGDPRPVEPGDVAVLVRTHKQVAMIRDALDAVGVPSVLTGGSSVFATPSATQWLWLLQAI 476

Query: 468  DQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQ 527
            +QPHR   VR  A +  FG TAE L   GD +   +A  LR ++G     G AA+FE   
Sbjct: 477  EQPHRSDRVRLTALSPIFGRTAEELDVDGDNVVAELAGQLRSYSGLFARVGFAAVFERIS 536

Query: 528  L-AGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWL--RTQXXXXXXXX 584
                + KRVL+   GER  TDL H+ QLL   A  E FGL+AL  WL  R +        
Sbjct: 537  AETNLEKRVLAAPSGERDFTDLRHVAQLLGRVATEEAFGLSALVRWLSDRIKDPTSGSAT 596

Query: 585  XXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRY--VPEPDLVLFHDDGQRCLHV- 641
                 LDSDAAAVQI TV  +KGL+FP+VY+PF++        P  +L   DG+R L V 
Sbjct: 597  DRSRRLDSDAAAVQIATVHATKGLEFPIVYVPFSWESVGGFNSPTQLLHDPDGRRILDVG 656

Query: 642  ---XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRA 698
                                    L YVALTRAQ Q+V WWAPSY      L RLM GR 
Sbjct: 657  GQEGPGHNARKTVAEAEEAGEELRLLYVALTRAQCQLVLWWAPSYGTSRSPLHRLMLGRT 716

Query: 699  PGEAIVPDKCSPPKISDE-DALERLRAWEAAGGPVIEESVIG-----XXXXXXXXXXXXD 752
            PG   + +     K+ D+     RL  W AA   VI    +G                 +
Sbjct: 717  PG---IAEPARVVKVLDDGTTAARLATWPAAASDVISVEPVGPHPPSPVQWSGAAANVTE 773

Query: 753  LAARKFFRAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFD---DIPVVAPAEG 809
            LAA +F R +D  W+RTSYS L   A  A     SE E  E+DDE +   D   V P+  
Sbjct: 774  LAAARFDRDLDTLWRRTSYSALTAGAHHAVTSTDSEVEDPEKDDEPEDSVDFGTVTPSPL 833

Query: 810  ADVPSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATH-IDAHSQHWPXXXXXXXXX 868
              +PSPM  LP GAAFG+LVH VLE  D  A DL AEL     +A S             
Sbjct: 834  EALPSPMNGLPAGAAFGTLVHEVLEVVDTAASDLRAELGIRCAEAVSVRAAEVDSEALAD 893

Query: 869  XXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGELLRE 928
                 M                I  +DRL ELDFE P+AGGD        L  V ELLR 
Sbjct: 894  ALLLVMQ-----TPLGFGTLATIAPKDRLPELDFELPLAGGDDPVSMSVTLRGVSELLRR 948

Query: 929  YLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGT 987
            +LP DD LA YA+ L    +   P+RG+L+GS+DAVLR+ G  FVIVDYKTN LG GD  
Sbjct: 949  HLPPDDILASYADHLDR--VETSPMRGFLTGSIDAVLRIPGPSFVIVDYKTNRLGRGD-- 1004

Query: 988  LTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMC 1047
            LTAA+Y R  M   M+ S YPLQALLY+V LHRYL WRL  YDP  HLGG  Y FVRGM 
Sbjct: 1005 LTAANYTRELMATEMMRSHYPLQALLYSVALHRYLRWRLPDYDPHRHLGGAQYQFVRGML 1064

Query: 1048 GAGTPVVDGHPAGVFSWEPPADLVVALSKLL 1078
            G  +P       GVF W+PPA L V LS LL
Sbjct: 1065 GPDSP----PECGVFEWKPPAQLTVELSDLL 1091


>tr|A6W6P2|A6W6P2_KINRD Tax_Id=266940 SubName:
            Full=Exodeoxyribonuclease V, beta subunit;[Kineococcus
            radiotolerans]
          Length = 1125

 Score =  732 bits (1890), Expect = 0.0
 Identities = 492/1130 (43%), Positives = 616/1130 (54%), Gaps = 63/1130 (5%)

Query: 3    VFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQEL 62
            VFDL GPLP    TTVLEASAGTGKT+ +AGLVTR+VAEGVAT+DQ+L++TFGRAA+ EL
Sbjct: 10   VFDLAGPLPV--ATTVLEASAGTGKTYTIAGLVTRYVAEGVATVDQLLVVTFGRAATAEL 67

Query: 63   RERVRAQIVAALVALDDPSRACNDLEE---YLVKTDQQXXXXXXXXXXXXXXXXT--IAT 117
            R+RVR ++VA   AL DP+ A    +    +L   D +                T  +AT
Sbjct: 68   RDRVRERLVATRDALADPASARRSRDAVLAHLAADDARAAEHRARLSEALAGFDTATVAT 127

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDD--PELSYPEA 175
             H+FC+ VL SLG A D D   TLVE +DDLV E+ DDLYL  F  +     P    P A
Sbjct: 128  IHEFCRQVLTSLGTAADVDPSATLVEDVDDLVEEVCDDLYL-RFAVRPGAGVPPFDRPTA 186

Query: 176  LKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLA 235
            L++AR  V     ++        SP  +R++FA  V  E+E RKR R VLG+DDLLTRL 
Sbjct: 187  LRIARAAVDRADARIEPPDTLPGSPENLRVRFALGVRREVEARKRSRRVLGFDDLLTRLR 246

Query: 236  DAL-EPEDSP-ARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIY 293
            DAL +P   P A  R+++R+ +V+VDEFQDTD VQW V+  AF G+  LVLIGDPKQAIY
Sbjct: 247  DALTDPVAGPVACERLRRRYSVVLVDEFQDTDAVQWDVLRTAFHGQGPLVLIGDPKQAIY 306

Query: 294  AFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARH 353
            AFRG D+ +YL AA  AG   TL TN RSD  ++    A+LRGA LG   IVV  V A H
Sbjct: 307  AFRGADVRSYLDAAGVAGTTATLSTNHRSDPLVLAGTAALLRGAALGEQRIVVRPVDAAH 366

Query: 354  QGHRLV---GAPRNDPFRLRVVSRK--PGNTRVIP-IDQLRRHIGRDLAADISALLNSGA 407
                LV   GAP   P R+RV+ R   P   R +P + + R  + RD AA + A+L  G 
Sbjct: 367  AAAALVDGSGAPDPAPVRVRVLERDGLPTTGRGLPPVGEARAVVARDTAAQVVAVLREGL 426

Query: 408  T-----WCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLY 462
                    ++ ++A D+AV+  T                  V +    VF + AA++W+ 
Sbjct: 427  RVRPRDGGERDLEAGDVAVLVRTGAQAALVQEELRRRGVPCVLSRGPSVFATPAAQEWIS 486

Query: 463  LLEAFDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAI 522
            LLEA +QPHR   VR  A + F G +A  L A GD  TD ++  LREW     ERGVA  
Sbjct: 487  LLEAVEQPHRAPRVRRVALSSFVGRSAAELDAAGDRATDELSVQLREWGAVLTERGVAGA 546

Query: 523  F----EAAQLAGMGKRVLSWQGGERLMTDLAHMTQLL-QDTAHREGFGLAALRDWLRT-- 575
            F    EA +L G   R+L  +GGER +TDL H+ ++L +++A   G G+++L  WLR   
Sbjct: 547  FAVVGEAHRLPG---RLLGVEGGERRLTDLRHIAEVLHRESALNPGGGVSSLLSWLRARV 603

Query: 576  QXXXXXXXXXXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRYV---PEPDLVLFH 632
            +             LD+D AAVQI TV  SKGL+F VV +PF ++       +  L + H
Sbjct: 604  EEAAGDADRERSRRLDTDRAAVQIATVHTSKGLEFEVVCVPFGWDAPGGGGSKDRLPVAH 663

Query: 633  -DDGQRCLHVXXXXXXXXXXXXXXXXXXXXX----LTYVALTRAQSQVVAWWAPSYDEPN 687
              DG R LHV                         L YVA+TRA S+++ WWAPS +   
Sbjct: 664  APDGPRALHVGGPGAPGYAAACRAADTEDLGEELRLLYVAVTRAVSRLLVWWAPSQNTEE 723

Query: 688  GGLSRLMRGRAPGEAIVPDKCSPPKISDEDALERLRAWEAAGGPVIEESV---IGXXXXX 744
            G L RL+    P    VP+    P   DE    RL +   AGGPV  E+V          
Sbjct: 724  GALHRLLLAEDP--LAVPESLPVP--GDEVLSSRLASRFPAGGPVAVETVPLRTPEDRLP 779

Query: 745  XXXXXXXDLAARKFFRAIDMAWKRTSYSGLLRAAET---AGVGVSSEPEVTERDDEFDDI 801
                    LA  +F  A+D+ W+RTSYSGL R       AG  V + PEV   DDE D  
Sbjct: 780  AVAAPAAHLAVARFRGAVDLGWRRTSYSGLTRGVHDGPGAGHAVLAGPEVDVTDDEVDLD 839

Query: 802  PVVAPAEGAD------VPSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATHIDAHS 855
               A A   D        SPMA LP G  FG+LVHAVLE  DP   D TA LA    A  
Sbjct: 840  AAGATAADDDPRGWRATVSPMADLPAGTGFGTLVHAVLEGFDPAVPDRTAHLAAL--ARE 897

Query: 856  QHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGR 915
            Q  P             P+                  + DRL ELDFE P+AGGD  G  
Sbjct: 898  QFDPQPAEDLALALG--PVLRTGLGPLAGGAALEGFPVADRLAELDFEMPLAGGDAAGPA 955

Query: 916  FARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRVGEK-FVIV 974
              R+ DV  LLR +LP  DP+  YA+ L   +LG + LRGYL+GS+DAVLR  E  F++V
Sbjct: 956  GPRVGDVAGLLRRHLPPGDPVHRYADALEDPVLGEEGLRGYLTGSIDAVLRRREGGFLVV 1015

Query: 975  DYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATH 1034
            DYKTN LG     LTA  Y R  + EA+L + YPLQALLY V LHR+L WR  GYDPA H
Sbjct: 1016 DYKTNRLGAPGEILTAWHYRREALDEAVLAAHYPLQALLYCVALHRFLRWRQPGYDPAVH 1075

Query: 1035 LGGVLYLFVRGMCGAGTPV-VDGHPAGVFSWEPPADLVVALSKLLDAEAP 1083
            LGGVLYLF+RGMCG   P   DG P GV+SW PPA LVV LS+LL    P
Sbjct: 1076 LGGVLYLFLRGMCGPEVPAGEDGVPPGVWSWRPPAGLVVDLSELLAGRTP 1125


>tr|C3JUW9|C3JUW9_RHOER Tax_Id=596309 (recB)SubName:
            Full=Exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Rhodococcus erythropolis SK121]
          Length = 1105

 Score =  728 bits (1879), Expect = 0.0
 Identities = 474/1111 (42%), Positives = 596/1111 (53%), Gaps = 58/1111 (5%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDLLGPLP    TTVLEASAGTGKT+A+ GL TR VAEG+A + Q+LL+TF RAA+QELR
Sbjct: 3    FDLLGPLPTG--TTVLEASAGTGKTYAIVGLATRCVAEGLADISQVLLVTFSRAATQELR 60

Query: 64   ERVRAQIVAALVALDDPS---RACNDLEEYLVKTDQQXXXXXXXXXXXXXXXX---TIAT 117
            ER R +      AL DP    R+ +DL  YL   D +                   TI T
Sbjct: 61   ERARERFAGVSAALVDPEAARRSDDDLVAYLATADDEEIGVRRRRLLRALAEFDAGTITT 120

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH FCQ +L  LG+AG+ +   T VES+DDL+SE+V DLYL+ +      P  S  +AL 
Sbjct: 121  THSFCQRMLDGLGIAGEREPDTTFVESVDDLISEVVSDLYLSRYSRTDSSPPFSTKDALA 180

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
            +AR  VG+    L        +P   R+ FA     E+E RKR +G+  ++DLLT L   
Sbjct: 181  IARSAVGDGQAILEPDGEEETAPGQ-RVLFAAAARLEVERRKRTKGIRDFNDLLTLLHGV 239

Query: 238  L-EPEDSPARVR-MQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAF 295
            L +PE  P   R +++++ +V++DEFQDTDP+QW ++  AF G +TLVL+GDPKQAIYAF
Sbjct: 240  LTDPEYGPVACRRVREKFKVVLIDEFQDTDPLQWDILRLAFHGHTTLVLVGDPKQAIYAF 299

Query: 296  RGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQG 355
            RG ++ +YL A   A   Q L TNWRSD  L+  L+ +  GA LG   IV H V+A H+ 
Sbjct: 300  RGAEVLSYLDAVDQADAHQELTTNWRSDPGLLAALEHLYGGAALGNEGIVAHPVEASHKK 359

Query: 356  HRLVGAPRNDPFRLRVVSRK---PGNTRVIP-IDQLRRHIGRDLAADISALLNSGATWC- 410
             RL G     P R+R + R    P N    P + +LR  +  D+AAD+ ALL   A    
Sbjct: 360  SRLFGPV---PMRVRHLPRTGAGPLNRSGFPAVGRLRSRVADDVAADVVALLGGDARLAV 416

Query: 411  ---DQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAF 467
                +PV+  D+AV+  THK                V TG S VF + +A  WL+LL+A 
Sbjct: 417  DGDPRPVEPGDVAVLVRTHKHVAMIRDALDAVGVPSVLTGGSSVFATPSATQWLWLLQAI 476

Query: 468  DQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQ 527
            +QPHR   VR  A +  FG T+E L   GD +   +A  LR ++G     G AA+FE   
Sbjct: 477  EQPHRSDRVRLTALSPIFGRTSEELDKDGDNVVAELAGQLRSYSGLFARVGFAAVFERIS 536

Query: 528  L-AGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWL--RTQXXXXXXXX 584
                + KRVL+   GER  TDL H+ QLL   A  E FGL+AL  WL  R +        
Sbjct: 537  AETNLEKRVLAAPSGERDFTDLRHVAQLLGRVATEEAFGLSALVRWLSDRIKDPTSGSAT 596

Query: 585  XXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRY--VPEPDLVLFHDDGQRCLHV- 641
                 LDSDAAAVQI TV  +KGL+FP+VY+PF++        P  +L   +G+R L V 
Sbjct: 597  DRSRRLDSDAAAVQIATVHATKGLEFPIVYVPFSWESVGGFNSPTQLLHDPEGRRILDVG 656

Query: 642  ---XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRA 698
                                    L YVALTRAQ Q+V WWAPSY      L RLM GR 
Sbjct: 657  GQEGPGYNARKTVAEAEEAGEELRLLYVALTRAQCQLVLWWAPSYGTSRSPLHRLMLGRT 716

Query: 699  PGEAIVPDKCSPPKISDE-DALERLRAWEAAGGPVIEESVIG-----XXXXXXXXXXXXD 752
            PG   + +     K+ D+     RL  W AA   VI    +G                 +
Sbjct: 717  PG---IAEPARVVKVLDDGTTAARLATWPAAASDVISVEPVGPHPPSPVHWSRAAADVTE 773

Query: 753  LAARKFFRAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFD---DIPVVAPAEG 809
            LAA +F R +D  W+RTSYS L   A  A     SE E  E+DDE +   D+  + P+  
Sbjct: 774  LAAARFDRDLDTLWRRTSYSALTAGAHHAVTTTGSEVEDPEKDDEPEDSVDLGSITPSPL 833

Query: 810  ADVPSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATH-IDAHSQHWPXXXXXXXXX 868
               PSPM  LP GAAFG+LVH VLE  D  A DL AEL     +A S             
Sbjct: 834  EAFPSPMNGLPAGAAFGTLVHEVLEVVDTAAADLRAELGMRCAEAVSVRAAEVDSEALAD 893

Query: 869  XXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGELLRE 928
                 M                I  +DRL ELDFE P+AGGD        L  V ELLR 
Sbjct: 894  ALYLVMQ-----TPLGFGTLATIAPKDRLPELDFELPLAGGDDPVSMSVTLRGVSELLRR 948

Query: 929  YLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGT 987
            +LPADD LA YA+ L    +   P+RG+L+GS+DAVLR+ G  FVIVDYKTN +G GD  
Sbjct: 949  HLPADDILASYADYLDR--VETSPMRGFLTGSIDAVLRIPGPSFVIVDYKTNRIGRGD-- 1004

Query: 988  LTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMC 1047
            LTAA+Y R  M   M+ S YPLQALLY+V LHRYL WRL  YDP  HLGG  Y FVRGM 
Sbjct: 1005 LTAANYTRELMATEMMRSHYPLQALLYSVALHRYLRWRLPDYDPHRHLGGAQYQFVRGML 1064

Query: 1048 GAGTPVVDGHPAGVFSWEPPADLVVALSKLL 1078
            G  +P       GVF W+PPA L V LS LL
Sbjct: 1065 GPDSP----PECGVFEWKPPAQLTVELSDLL 1091


>tr|Q73SI1|Q73SI1_MYCPA Tax_Id=1770 SubName: Full=Putative
            uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 619

 Score =  724 bits (1869), Expect = 0.0
 Identities = 381/617 (61%), Positives = 430/617 (69%), Gaps = 12/617 (1%)

Query: 475  LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
            +VRAAAATMFFGETAE+LAAGGDALTDR+A TLREWAGH+RERGVAAIFEAAQL GM  R
Sbjct: 1    MVRAAAATMFFGETAETLAAGGDALTDRIAQTLREWAGHSRERGVAAIFEAAQLLGMSNR 60

Query: 535  VLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXXXXXLDSDA 594
            VL WQGG R MTDLAH+TQLL + AHRE   L ALRDWLR Q             LDSDA
Sbjct: 61   VLGWQGGARHMTDLAHLTQLLGEVAHREHHNLPALRDWLRRQRDERSGAPERNRRLDSDA 120

Query: 595  AAVQIMTVWVSKGLQFPVVYLPFAFNRYVPEPDLVLFHD-DGQRCLHV----XXXXXXXX 649
            AAVQIMTV+VSKGLQ+P+VYLPFAF+R   + D+VLFHD DG RCLHV            
Sbjct: 121  AAVQIMTVFVSKGLQYPIVYLPFAFHRNTTDSDVVLFHDEDGTRCLHVGGKDSPDFKTVE 180

Query: 650  XXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAPGEAIVPDKCS 709
                         LTYVALTRAQ+QVVAWW+P+Y EPNGGLSRL+RGR PGE +VPD+C 
Sbjct: 181  RLGRKEDASDDSRLTYVALTRAQAQVVAWWSPAYHEPNGGLSRLLRGRRPGEPVVPDRCE 240

Query: 710  PPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXXDLAARKFFRAIDMAWKRT 769
            P KISD DAL RLR WEAAGGPVIEESV               L  R F R ID  W+RT
Sbjct: 241  PAKISDADALARLREWEAAGGPVIEESVPAPAPPLSGVPVPARLENRHFHRGIDTGWRRT 300

Query: 770  SYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVPSPMAHLPTGAAFGSLV 829
            SYSGL+R A+ +GVG  SEPE    DDE  DI +       DV SPMA LP GA FG+LV
Sbjct: 301  SYSGLIRQAQPSGVG--SEPEAAGLDDEVGDILLAPATSVGDVASPMADLPAGATFGTLV 358

Query: 830  HAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXR 889
            HAVL+TADPFA DL AEL   I  HS  WP             PMHD            R
Sbjct: 359  HAVLQTADPFAPDLAAELTARIREHSVWWPVAATPEDMAAAMVPMHDTPLGPLAGGLTLR 418

Query: 890  QIGLRDRLCELDFEFPMAGGDLRGG-RFARLSDVGELLREYLPADDPLAVYAERLSTGIL 948
            +IGL DRLCELDFE P+AGGD R      RL+D+  LLR +LPADD LA YA+RL+   L
Sbjct: 419  RIGLSDRLCELDFELPLAGGDRRSAPPEVRLADLSPLLRAHLPADDVLACYADRLTDRSL 478

Query: 949  GVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLH 1004
            G +PLRGYL+GS+DAVLR+    G ++++VDYKTN LG     LTAADY R RMVEAMLH
Sbjct: 479  GAEPLRGYLTGSIDAVLRIPDGAGHRYLVVDYKTNRLGDAQHPLTAADYDRPRMVEAMLH 538

Query: 1005 SDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSW 1064
            SDYPLQALLY+ VLHR+L WRL+GY+P  HLGG+LYLFVRGMCG  TPV DGHP+GVF W
Sbjct: 539  SDYPLQALLYSAVLHRFLRWRLAGYEPDRHLGGILYLFVRGMCGPDTPVRDGHPSGVFDW 598

Query: 1065 EPPADLVVALSKLLDAE 1081
             PP+ L+ ALS LLDA+
Sbjct: 599  RPPSSLITALSDLLDAQ 615


>tr|Q0SFN8|Q0SFN8_RHOSR Tax_Id=101510 SubName:
            Full=Exodeoxyribonuclease V beta subunit;
            EC=3.1.11.5;[Rhodococcus sp.]
          Length = 1103

 Score =  715 bits (1845), Expect = 0.0
 Identities = 475/1115 (42%), Positives = 597/1115 (53%), Gaps = 61/1115 (5%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDLLGPLP    TTVLEASAGTGKT+A+ GL  RFVAEG   L Q+LL+TF RAA+QELR
Sbjct: 7    FDLLGPLP--EGTTVLEASAGTGKTYAIVGLAARFVAEGGVDLSQLLLVTFSRAATQELR 64

Query: 64   ERVRAQIVAALVALDDPSRA---CNDLEEYLVKTDQ---QXXXXXXXXXXXXXXXXTIAT 117
            ER R +  +A  AL DP+ A    + L  +L + D                     TI T
Sbjct: 65   ERTRERFGSAAAALADPAAARLSADQLIRHLAEADTGEVTLRRRRLLQALSDFDAATIVT 124

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH FCQ +L  LG+AG+ D    LVE+ DDL +E++ DLYL  +   +  P  +  EA  
Sbjct: 125  THSFCQRMLDGLGIAGERDPDTVLVEAADDLTTEVIADLYLRAYSRVESAP-FTPAEATA 183

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
             AR  + +P   L        +PA  R+ FA  V AE+E RKR  G+  +DDL   L   
Sbjct: 184  AARAAIFDPQAVLAPEDTRG-TPAGDRVAFAEAVRAEVERRKRAVGLRDFDDLPMLLHRV 242

Query: 238  L-EPEDSPARVR-MQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAF 295
            L +PE   A  R +++R+ +V+VDEFQDTDP+QW ++ R F G  T+VL+GDPKQAIYAF
Sbjct: 243  LSDPEHGAAACRRVRERYGVVLVDEFQDTDPLQWDILRRTFHGSGTVVLVGDPKQAIYAF 302

Query: 296  RGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQG 355
            RG ++ +YL A  +A   Q L TNWRSD+ L+D L+ +  GA LG P+IVVH V      
Sbjct: 303  RGAEVLSYLDAVRSADRHQELTTNWRSDQELLDGLEYLHGGAALGHPEIVVHRVDGARPK 362

Query: 356  HRLVGAPRNDPFRLRVVSRK---PGNTRVIP-IDQLRRHIGRDLAADISALLNSGAT--- 408
             RL GA    P RLR + R    P N    P +  LR+ I  DLAAD+ ALL+ GAT   
Sbjct: 363  SRLTGAA---PLRLRYLPRTGAGPINKSGYPAVGPLRKRIAADLAADVVALLDGGATLDV 419

Query: 409  -WCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAF 467
                + V+  DIAV+  T+                 V  G + VFT+ AA+ WL++L+A 
Sbjct: 420  GGDTRLVEPGDIAVLVRTNAQITLVHDALDRAGVPSVLAGGASVFTTPAAQHWLWILQAI 479

Query: 468  DQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFE-AA 526
            +QPHR   VR AA T   G TAE L A GD +   V   LRE      + G AA+FE  +
Sbjct: 480  EQPHRSDRVRLAALTPLLGHTAEELDARGDDIVAEVGGQLRELGAVFAQSGFAALFERLS 539

Query: 527  QLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWL-RTQXXXXXXXXX 585
             +A +  R+L    GER +TDL H+ QLL   A  +  GL A+  WL             
Sbjct: 540  AVAALEARLLRVAAGERALTDLRHVAQLLNGAAVEQSLGLTAVTRWLTERMKDPSSGGVD 599

Query: 586  XXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFN-RYVPEPDLVLFH-DDGQRCLHV-- 641
                LDSDAAAVQI TV  SKGL+FP+VYLP+A++   + +P  +L H DDG+R L V  
Sbjct: 600  RSRRLDSDAAAVQIATVHASKGLEFPLVYLPYAWDAAKISKPSKLLLHDDDGRRILDVGG 659

Query: 642  --XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAP 699
                                   L YVA+TRA   +V WWAP++      L R++ GR P
Sbjct: 660  PGSPGYADRRNRHDAEEAGEELRLLYVAVTRAMCGLVVWWAPAFTTAGAPLHRMILGRQP 719

Query: 700  GEAIVPDKCSPPKISDEDALERLRAWEAAGGPVIEESVIG-----XXXXXXXXXXXXDLA 754
            G+  VP K + P+  D    ERL AW  A    +    +G                 DL 
Sbjct: 720  GQREVPQKVTVPE--DPVVAERLSAWGTAAPETVTVEAVGSDPIVRVGWTPQREPRGDLE 777

Query: 755  ARKFFRAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAE-GADVP 813
            A +F R +D  W+RTSYS L  +A  A   V SE EV E+ DE  + P+ APA+  + V 
Sbjct: 778  AARFRRLLDTRWRRTSYSALTASAHDA-PAVGSEAEVEEKTDEPAEPPLQAPADITSGVA 836

Query: 814  SPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELA-----THIDAHSQHWPXXXXXXXXX 868
            S M  LP GA FG+LVHAV E  D  A DL AE+            S   P         
Sbjct: 837  STMNELPGGATFGTLVHAVFEIVDTAAPDLDAEVLRCCRDVIASTLSDIDPAQLATALLP 896

Query: 869  XXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGELLRE 928
                P+                I   D L ELDFE P+AGGD        L  VGELLR 
Sbjct: 897  VLRTPL------GAGAETTLADIAPADLLAELDFELPLAGGD-TPSLTVMLDGVGELLRT 949

Query: 929  YLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGT 987
            +LP DDPL  YA+ + T  L   PLRGYL+GS+DAVLR+ G ++V+VDYKTN L  GD  
Sbjct: 950  HLPVDDPLRSYADAVQT--LEPTPLRGYLTGSIDAVLRLPGPRYVVVDYKTNRLAQGD-- 1005

Query: 988  LTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMC 1047
            LT A Y R  M   M+ + YPLQALLY+V LHRYL WR   YDPA HLGGV YLFVRGM 
Sbjct: 1006 LTTAHYTRESMAAEMVRAHYPLQALLYSVALHRYLRWRQPNYDPAVHLGGVQYLFVRGMV 1065

Query: 1048 GAGTPVVDGHPAGVFSWEPPADLVVALSKLLDAEA 1082
            G  TP       GVF W PPA L+  LS LL   A
Sbjct: 1066 GPDTP----PGCGVFDWAPPAALITELSDLLSGSA 1096


>tr|C1AXR2|C1AXR2_RHOOB Tax_Id=632772 (recB)SubName:
            Full=Exodeoxyribonuclease V beta chain;
            EC=3.1.11.5;[Rhodococcus opacus]
          Length = 1103

 Score =  713 bits (1840), Expect = 0.0
 Identities = 473/1115 (42%), Positives = 592/1115 (53%), Gaps = 61/1115 (5%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDLLGPLP    TTVLEASAGTGKT+A+ GL  RFVAEG   L ++LL+TF RAA+QELR
Sbjct: 7    FDLLGPLP--EGTTVLEASAGTGKTYAIVGLAARFVAEGGVDLSRLLLVTFSRAATQELR 64

Query: 64   ERVRAQIVAALVALDDPSRACNDLEEYL------VKTDQQXXXXXXXXXXXXXXXXTIAT 117
            ER R +  +A  AL DP+ A    +  +         +                  TI T
Sbjct: 65   ERTRERFGSAAAALADPAAARLSADLVIRHLAEAAADEVALRRRRLLQALSDFDAATIVT 124

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH FCQ +L  LG+AG+ D    LVE+ DDL +E++ DLYL  +G + D    +  EA  
Sbjct: 125  THSFCQRMLDGLGIAGERDPDTVLVEAADDLTTEVIADLYLRAYG-RADSAPFTPAEATS 183

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
             AR  + +P   L        +PA  R+ FA  V AE+E RKR  G+  +DDL   L   
Sbjct: 184  AARAAIFDPQAVLAPEDARG-TPAGDRVAFAEAVRAEVERRKRAVGLRDFDDLPMLLHRV 242

Query: 238  L-EPEDSPARVR-MQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAF 295
            L +PE   A  R +++R+ +V+VDEFQDTDP+QW ++ R F G  TLVL+GDPKQAIYAF
Sbjct: 243  LSDPEHGAAACRRVRERYGVVLVDEFQDTDPLQWDILRRTFHGNGTLVLVGDPKQAIYAF 302

Query: 296  RGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQG 355
            RG ++ +YL A  +A   Q L TNWRSD+ L+D L+ +  GA+LG P+IVVH V      
Sbjct: 303  RGAEVLSYLDAVRSADRHQELTTNWRSDQELLDGLEYLHGGAELGHPEIVVHRVDGARPK 362

Query: 356  HRLVGAPRNDPFRLRVVSRK---PGNTRVIP-IDQLRRHIGRDLAADISALLNSGAT--- 408
             RL GA    P RLR + R    P N    P +  LR+ I  DLAAD+ ALL+ GAT   
Sbjct: 363  SRLTGAA---PLRLRYLPRTGAGPINKSGYPAVGALRKRIAADLAADLVALLDGGATLDV 419

Query: 409  -WCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAF 467
                + V+  DIAV+  T+                 V  G + VFT+ AA+ WL++L+A 
Sbjct: 420  GGTTRLVEPGDIAVLVRTNAQITVVHDALDRAGVPSVLAGGASVFTTPAAQHWLWILQAI 479

Query: 468  DQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQ 527
            +QPHR   VR AA T   G TAE L A GD +   V   LRE      + G AA+FE   
Sbjct: 480  EQPHRADRVRLAALTPLLGHTAEELDAHGDDIVAEVGAQLRELGAVFAQSGFAALFERLS 539

Query: 528  LAG-MGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWL-RTQXXXXXXXXX 585
              G +  R+L    GER +TDL H+ QLL   A  +  GL A+  WL             
Sbjct: 540  AVGALEARLLRVAAGERALTDLRHVAQLLNSAAVEQSLGLTAVTRWLTERMKDPTTGGVD 599

Query: 586  XXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFN-RYVPEPDLVLFH-DDGQRCLHV-- 641
                LDSDAAAVQI TV  SKGL+FP+VYLP+A++   + +P  +L H DDG+R L V  
Sbjct: 600  RSRRLDSDAAAVQIATVHASKGLEFPLVYLPYAWDAAKISKPSKLLLHDDDGRRILDVGG 659

Query: 642  --XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRAP 699
                                   L YVA+TRA   +V WWAP++  P   L R++ GR P
Sbjct: 660  PGSPGYADRRNRHDAEEAGEELRLLYVAVTRAMCGLVMWWAPAFTTPAAPLHRMILGRLP 719

Query: 700  GEAIVPDKCSPPKISDEDALERLRAWEAAGGPVIEESVIG-----XXXXXXXXXXXXDLA 754
            G+  VP K   P+  D    ERL AW  A    +    +G                 DL 
Sbjct: 720  GQREVPQKVIVPE--DPIVAERLSAWGTAAPETVTVEAVGCEPIPRVGWTPEREPSGDLE 777

Query: 755  ARKFFRAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAP-AEGADVP 813
            A +F R +D  W+RTSYS L  +A  A   V SE EV E+ DE D+ P+ AP    A VP
Sbjct: 778  AARFRRLLDTRWRRTSYSALTASAHDA-PAVGSEAEVEEKTDEPDEPPLHAPDGVTAGVP 836

Query: 814  SPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELA-----THIDAHSQHWPXXXXXXXXX 868
            S M  LP GA FG+LVHAV E  D  A DL  E+            S   P         
Sbjct: 837  STMNELPGGATFGTLVHAVFEIVDTAAPDLDDEVLRCCRDVIASTLSDVDPAQLATALVP 896

Query: 869  XXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGELLRE 928
                P+                +   D L ELDFE P+AGGD        L  VG LLR 
Sbjct: 897  VLRTPL------GAGAERTLADLAPADLLAELDFELPLAGGD-TPSLTVMLDGVGRLLRT 949

Query: 929  YLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGTGDGT 987
            +LP +DPL  YA+ + T  L   PLRGYL+GS+DAVLR+ G ++V+VDYKTN L  GD  
Sbjct: 950  HLPENDPLRSYADAVQT--LEPTPLRGYLTGSIDAVLRLPGPRYVVVDYKTNRLAQGD-- 1005

Query: 988  LTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMC 1047
            LT A Y R  M   ML + YPLQALLY+V LHRYL WR  GYDP  HLGGV YLFVRGM 
Sbjct: 1006 LTTAHYTRGSMAAEMLRAHYPLQALLYSVALHRYLRWRQPGYDPGLHLGGVQYLFVRGMV 1065

Query: 1048 GAGTPVVDGHPAGVFSWEPPADLVVALSKLLDAEA 1082
            G  TP       GVF W PPA L+  LS LL   A
Sbjct: 1066 GPDTP----PGCGVFDWAPPAALITELSDLLSGSA 1096


>tr|D5PVV9|D5PVV9_COREQ Tax_Id=525370 (recB)SubName:
            Full=Exodeoxyribonuclease V beta subunit;
            EC=3.1.11.5;[Rhodococcus equi ATCC 33707]
          Length = 1106

 Score =  713 bits (1840), Expect = 0.0
 Identities = 479/1116 (42%), Positives = 602/1116 (53%), Gaps = 66/1116 (5%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDL  PLP    TTVLEASAGTGKT+A+ GL  RFVAE    L Q+LL+TF RAA++ELR
Sbjct: 12   FDLFAPLP--QGTTVLEASAGTGKTYAIVGLAARFVAEEGIDLSQLLLVTFSRAATKELR 69

Query: 64   ERVRAQIVAALVALDDPSRAC---NDLEEYLVKTDQQXXXXXXXXXXXXXXXX---TIAT 117
            ER R +  +A   L DP+ A    + L  +L  TD                     TI T
Sbjct: 70   ERTRERFASAAAGLADPAAARVSKDPLVAHLADTDDAEIARRRRRLMQALSDFDAGTIVT 129

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH FCQ +L  LG+AGD D    LVE  +DLVSE++ DL+L  F    D   L   +A  
Sbjct: 130  THSFCQRMLDGLGIAGDRDPDAVLVEEAEDLVSEVIADLFLHRFACA-DSRTLRPADARA 188

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
             AR  + +P + L        + A   + FA  V  E + RKR  G+  +DDL   L   
Sbjct: 189  AARAAIFDPQSVLAPEDAEG-TRAGDAVAFATAVRQETQRRKRLAGIRDFDDLPALLHGV 247

Query: 238  L-EPEDSPARVR-MQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAF 295
            L +PE   A  R ++ R+ +V+VDEFQDTDP QW ++  AF G STLVL+GDPKQAIYAF
Sbjct: 248  LTDPEHGEAACRRVRDRYRVVLVDEFQDTDPQQWGILRAAFHGHSTLVLVGDPKQAIYAF 307

Query: 296  RGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQG 355
            RG ++ +YL AA +A   Q L TNWRSD  LV  L  +  GA LG  DIVVH V A  QG
Sbjct: 308  RGAEVLSYLDAAGSAHSHQELTTNWRSDADLVAALGHLHGGAALGHRDIVVHPVSAAKQG 367

Query: 356  HRLVGAPRNDPFRLRVVSR----KPGNTRVIPIDQLRRHIGRDLAADISALLNSGATW-- 409
             RL GA    P RLR +SR    +  N+    +  LR  +  D+AADI  LL SGAT   
Sbjct: 368  SRLQGAA---PLRLRYLSRAGAGRLNNSGYPAVGALRSRVAADVAADIVELLGSGATLEL 424

Query: 410  --CDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAF 467
                +PV+  D+A++  T+                 V  G + VF + AA  WL +L+A 
Sbjct: 425  NGVTRPVEPGDVAILAGTNAQIALVREALDRVGVPSVLAGGTSVFETPAATQWLQVLQAL 484

Query: 468  DQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEA-A 526
            +QPHRP  VR AA T   G TA  + A  D +  RV   LRE A    + G AA+FE  A
Sbjct: 485  EQPHRPDRVRLAALTPLIGWTAADVDARSDEVVARVGGQLRELATVFAQSGFAALFERLA 544

Query: 527  QLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQXXXXXXXXXX 586
              +G+  R+L+   GER +TDL H+ QLL   A  E  GL AL  WL  +          
Sbjct: 545  AESGLEARLLTVASGERTLTDLRHIGQLLGAVAVDESLGLTALTGWLTDRIKDPKSGGGD 604

Query: 587  XXX-LDSDAAAVQIMTVWVSKGLQFPVVYLPFAFN--RYVPEPDLVLFHDD-GQRCLHVX 642
                LDSDAAAVQI TV  SKGL++P+VY+PF ++  RY  +P+ +L HD+ G+R L + 
Sbjct: 605  RSRRLDSDAAAVQIATVHASKGLEYPIVYVPFGWSTGRYA-DPNRLLLHDEHGRRILDIG 663

Query: 643  XXXXXXXXXXXXXXXXXXXX----LTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRA 698
                                    L YVALTRAQ Q+V WWAP+Y      L R++ GR 
Sbjct: 664  GEGSPGYGDRRRRRDAEAAGEDLRLLYVALTRAQCQLVLWWAPAYSTNEAPLHRMLFGRE 723

Query: 699  PGEAIVPDKCSPPKISDEDALERLRAWEAAGGPVIEESVIGXXXXXXXXXXXX-----DL 753
            PGE+ VP K   P+  D    E+L  W  A    +E   +G                 +L
Sbjct: 724  PGESDVPQKVGVPE--DPMVAEQLTRWAQAAPVTVEVQAVGADPIPQPSWTPPQEETGEL 781

Query: 754  AARKFFRAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAPAEGADVP 813
            AA  F R +D  W+RTSY+ L  +A     GV+SE E  E +DE ++  ++  A    +P
Sbjct: 782  AAAVFRRELDAGWRRTSYTALTASAHEHP-GVTSEAEEPEIEDEPEEPALITAAPVEGIP 840

Query: 814  SPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATHIDAH-----SQHWPXXXXXXXXX 868
            S M  +P GA FG+LVH +LE  D  A+DL  EL  H         SQ  P         
Sbjct: 841  STMNDMPYGAVFGTLVHEILEHVDTAADDLETELVRHCREAVAARMSQVDPVALADALLP 900

Query: 869  XXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGELLRE 928
                P+                I  RDRL ELDFE P+AGGD        L  + +LLR+
Sbjct: 901  VLRTPL--------AGGGTLADITPRDRLPELDFELPLAGGDDPAVLTVTLHRIVDLLRK 952

Query: 929  YLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTG 984
            +LP DD LA YA+RL+T  L   PLRGYL+GS+DAVLR+    G +FVIVDYKTN +  G
Sbjct: 953  HLPPDDVLAPYADRLAT--LDPTPLRGYLTGSIDAVLRLSGPDGPRFVIVDYKTNRIAPG 1010

Query: 985  DGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVR 1044
            +  +T AD+ R  M   M+ S YPLQALLYAV LHRYL WRL GY P THLGGV YLFVR
Sbjct: 1011 E--VTTADFTREAMAGEMMRSHYPLQALLYAVALHRYLRWRLPGYTPETHLGGVQYLFVR 1068

Query: 1045 GMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLDA 1080
            GM G  TP  DG  AGVF W+PPA LVV LS LL A
Sbjct: 1069 GMVGPDTP--DG--AGVFDWDPPAALVVELSDLLAA 1100


>tr|D5UHJ8|D5UHJ8_9CELL Tax_Id=446466 SubName:
            Full=Exodeoxyribonuclease V; EC=3.1.11.5;[Cellulomonas
            flavigena DSM 20109]
          Length = 1148

 Score =  707 bits (1826), Expect = 0.0
 Identities = 480/1152 (41%), Positives = 610/1152 (52%), Gaps = 84/1152 (7%)

Query: 3    VFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQEL 62
            VF++ GPLPA   TTVLEASAGTGKTF +A L  R+VAEG A L ++LL+TFGR A+ EL
Sbjct: 4    VFEVCGPLPAG--TTVLEASAGTGKTFTIAALAARYVAEGHALLPELLLVTFGRTATSEL 61

Query: 63   RERVRAQIVAALVALDDPSRACND--LEEYLVKTDQQXXXXXXXXXXXXXXXX---TIAT 117
            R+RVRA++VA   AL DP+   +D  L  +L   D                     TI T
Sbjct: 62   RDRVRARLVATERALRDPAARTSDDVLVRHLADVDDAELARRRDRLTVALSQVDAATITT 121

Query: 118  THQFCQIVLKSLGVA---GDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPE 174
            TH FCQ +L++LG     G  + G TLV  + DL +E+VDDLYLA + G  D P L+  +
Sbjct: 122  THGFCQQMLRALGTTTGGGVVEPGATLVPDVADLEAEVVDDLYLAAYAGA-DQPVLTVAD 180

Query: 175  ALKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRL 234
            A ++AR  V + A  L        +    R + AR V  E+  R+R   V+ YDDLLT L
Sbjct: 181  AREVARAAVSDHAALLAPDDAPPGTAPDHRYRLARAVRHEVVRRRRAAHVVDYDDLLTLL 240

Query: 235  ADALEPEDSPARVRMQQRWP--IVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAI 292
             DAL    + A    + R P  +VMVDEFQDTD VQWQ++  AF G  TLVLIGDPKQAI
Sbjct: 241  RDALTDPATGAAAAERVRAPYRVVMVDEFQDTDQVQWQILRTAFHGHRTLVLIGDPKQAI 300

Query: 293  YAFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQAR 352
            YAFRG D+ TYL A   A    TLG +WR+D  ++D L  ++ GA LG P IVVH V+A 
Sbjct: 301  YAFRGADVHTYLEARGVA-TTATLGRSWRTDAPVLDGLAHLMGGAALGDPRIVVHPVEAA 359

Query: 353  HQGHRLVGAPRNDPFRLRVVSRKP--GNTRVIPIDQLRRHIGRDLAADI-----SALLNS 405
            H   RL G P   P  +R V+R+     +    +D +R  + RD+AA +      + L  
Sbjct: 360  HTERRLDGGP---PVLVRRVTRRAVGAGSAAPKVDTVRSVVHRDVAARVVLTLTHSRLRD 416

Query: 406  GATWCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLE 465
            G  W  +PV   D+AV+   + D               V +G S VFT+ AA DWL LL 
Sbjct: 417  GDAW--RPVLPGDVAVLARRNADALAVREALAAVGVPAVVSGLSSVFTTAAARDWLVLLS 474

Query: 466  AFDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEA 525
            A         V AAA T F G  A  LA   DA  + +AD +R W+     +GVAA+ +A
Sbjct: 475  ALAATGDTARVAAAALTPFVGWDATRLAGASDAQREDLADRMRTWSHVLAGQGVAALLQA 534

Query: 526  AQLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRTQ--XXXXXXX 583
               AG+ +R+ +   GER++TD+ H+ ++L   A   G G AAL +WLR +         
Sbjct: 535  TAAAGLHERLAARVDGERVLTDVRHVGEVLHAAARDAGLGAAALTEWLRARIDEAAVDYA 594

Query: 584  XXXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRYVP-EPDLVLFH-DDGQRCLHV 641
                  L++DAAAVQ++TV  +KGL+FPVV +PFA++R+VP +P ++ +H DDG R LHV
Sbjct: 595  EERSRRLETDAAAVQVVTVHAAKGLEFPVVMVPFAWDRWVPRDPSVLRYHDDDGTRRLHV 654

Query: 642  ----XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGR 697
                                     L YVALTRA SQVV WWAPS    +G + RL+ G 
Sbjct: 655  GGRGSPGYDEARARHQAEEAGEDLRLAYVALTRASSQVVLWWAPSTVSASGAVGRLVLGA 714

Query: 698  APGEAIVPDKCSPPKISDEDALERLRAWEA-AGGPVIEESVIGXXXXXXXXXXXXD---L 753
               + + PD    P+  D+ A     A  A +GG V+ E+V              +   L
Sbjct: 715  RDADGLPPDTVPVPR--DDQAAAGFDALAAGSGGTVVHETVDAAPPVVRWEPVRGEPGPL 772

Query: 754  AARKFFRAIDMAWKRTSYSGLLRAAETAG---------VGVSSEPEVTERDDEFD-DIPV 803
               +  R +D+ W+RTSYSG+  AA  AG          GV+ EPE     DE D   P 
Sbjct: 773  EVARLGRGVDLTWRRTSYSGITAAAHDAGPAGPSVPDRPGVTDEPEDPGIQDETDGPAPT 832

Query: 804  VAPAEGAD-----------------------VPSPMAHLPTGAAFGSLVHAVLETADPFA 840
              P  GA                        V SP+A LP G AFG+LVH VLE  D  A
Sbjct: 833  PPPHAGAGDEPDLAVLAATTPDPALVAALRAVRSPLADLPGGTAFGTLVHHVLENVDTAA 892

Query: 841  EDLTAEL-ATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCE 899
             DL  EL A   +A                   P                Q+   DRL E
Sbjct: 893  ADLRGELRARCAEAAGGGGGLGLDPDALADALLPSMHTPAGPLLGGRTLAQVPPHDRLAE 952

Query: 900  LDFEFPMAGGDL--RGGRFARLSDVGELLREYLPADDPLAVYAERLS--TGILGVQP--L 953
            LD E P+AGGDL   G R A L+DV +LL  +L  DDP A YA RL       G +P  L
Sbjct: 953  LDLELPLAGGDLDPAGRRPATLADVADLLDAHLDPDDPFAAYAGRLRWLHADPGTRPAAL 1012

Query: 954  RGYLSGSVDAVLRV----GEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPL 1009
            RGYL+GS+DAVLRV      ++V+VDYKTN L   D  LTA  Y    M  AML + YPL
Sbjct: 1013 RGYLTGSIDAVLRVDVDGDTRYVVVDYKTNRLAPPDDPLTAWHYRPEAMRTAMLDAHYPL 1072

Query: 1010 QALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPAD 1069
            Q LLYAV LHR+L WRL GYDP  HLGG +YLFVRGMCG  TPVVDG P GV SW PPA 
Sbjct: 1073 QLLLYAVGLHRFLRWRLPGYDPDRHLGGGVYLFVRGMCGPDTPVVDGSPCGVVSWRPPAS 1132

Query: 1070 LVVALSKLLDAE 1081
            LVV +S LLD +
Sbjct: 1133 LVVGVSALLDGQ 1144


>tr|Q5YWP8|Q5YWP8_NOCFA Tax_Id=37329 (recB)SubName: Full=Putative RecB
            protein;[Nocardia farcinica]
          Length = 1113

 Score =  683 bits (1762), Expect = 0.0
 Identities = 467/1115 (41%), Positives = 581/1115 (52%), Gaps = 61/1115 (5%)

Query: 2    KVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQE 61
            + FD  GPLP    TTVLEASAGTGKT A+ GL  R+VAE    + ++LL+TF RAA+QE
Sbjct: 15   ETFDPCGPLP--RGTTVLEASAGTGKTHAIVGLAVRYVAEAGVRIAELLLVTFSRAATQE 72

Query: 62   LRERVRAQIVAALVALDDP--SRACND-LEEYLVKTDQQXXXXXXXXXXXXXXXX---TI 115
            LRER R + VA   AL DP  +RA  D L  +L   D                     TI
Sbjct: 73   LRERARDRFVAVAAALADPDSARAAGDELIAHLAAADDTEVALRRTRLLTALSDFDAGTI 132

Query: 116  ATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEA 175
            ATTH FCQ +L  LG+AG+ D    LVE++DDLV  + DDLYL  +   +  P     EA
Sbjct: 133  ATTHSFCQRMLDELGLAGERDTAARLVETVDDLVVTVADDLYLHRYA--RAQPPFGRKEA 190

Query: 176  LKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLA 235
              LA   V +   +L             R+ FA  V AE E RKR  G+  +DDLL  L 
Sbjct: 191  HTLALAAVRDRHARLVPDDEDEPGE---RVAFAAAVRAETERRKRLAGLRDFDDLLVLLH 247

Query: 236  DALEPED--SPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIY 293
            D L   D    A  R++ R+ + +VDEFQDTDP+QW ++ R+F G +TLVL+GDPKQAIY
Sbjct: 248  DVLADPDHGEGACARVRARYRVALVDEFQDTDPLQWDILRRSFHGHTTLVLVGDPKQAIY 307

Query: 294  AFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARH 353
            AFRG ++ +YL A A A  ++ L  NWRSD  L+  L  +  GA LG P+I V+ V+A  
Sbjct: 308  AFRGAEVLSYLDAVAHADSRKELTRNWRSDAGLLRALDHLQGGAALGHPEISVYPVEATR 367

Query: 354  QGHRLVG-APRNDPFRLRVVSRK---PGNTRVIP-IDQLRRHIGRDLAADISALLNSGAT 408
               RL G A    P RLR + R    P N    P + + R  +  DLAAD+  LL SGA 
Sbjct: 368  PWSRLSGPAELITPLRLRCLPRTGAGPLNKSGFPAVGRQRAKVADDLAADLVRLLESGAE 427

Query: 409  WCD--------QPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDW 460
              D        +PV A DIAV+  T                  V  G + VF + +A  W
Sbjct: 428  VTDGHGAGAVRRPVAAGDIAVLVRTRTQIDVVRAALDRVGVASVLAGGTSVFGTPSATHW 487

Query: 461  LYLLEAFDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVA 520
            L++L A +QPHR   VR AAAT   G     +  GG  L  RV+  LR+ A      G A
Sbjct: 488  LWVLRALEQPHRSDRVRLAAATPILGYPPAEIDRGGADLVGRVSAQLRDAARLFARAGFA 547

Query: 521  AIFE-AAQLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWL--RTQX 577
            A++E  A  A +  R+L  + GER +TDL H+ QLL   A  +G GL AL  WL  R + 
Sbjct: 548  AVYERLAAQARLAPRLLGIENGERTLTDLRHIAQLLDQVALADGLGLTALTRWLADRVRD 607

Query: 578  XXXXXXXXXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAF-NRYVPEPDLVLFH-DDG 635
                        LD DAAAVQI TV  SKGL+FP+VYLPFA+ N   P P  +LFH DDG
Sbjct: 608  PASGAVADRSRRLDRDAAAVQIATVHASKGLEFPIVYLPFAWDNAKNPYPGSLLFHDDDG 667

Query: 636  QRCLHV----XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLS 691
             R L V                         L YVALTRA+ QVVAWWAP++      L 
Sbjct: 668  TRVLDVGGPDAPGYAQRKLRCEAEEAGEELRLLYVALTRAKCQVVAWWAPAHSTAAAPLH 727

Query: 692  RLMRGRAPGEAIVPDKCSPPKISDEDALERLRAWEAAGGPVIEESVIG-----XXXXXXX 746
            R++ GR  G   VPD+   P  +D  A+    AW    G  I  + +             
Sbjct: 728  RMILGRPEGGPHVPDRAPVP--ADTAAVPMFTAWAEPAGAAISVTAVDTAEAVEIRRVRV 785

Query: 747  XXXXXDLAARKFFRAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEFDDIPVVAP 806
                 +LAA +F R++D+ W+RTSYS L   A    +   +EPE      +  + P +  
Sbjct: 786  EPVTGELAAARFDRSLDLLWRRTSYSALTAGAH--DLVTDAEPEDVRGPGDEPETPALLT 843

Query: 807  AEGA--DVPSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXX 864
             E A    PS M  LP GA FG+LVH VLE  D  A DL AE+ T     +         
Sbjct: 844  DEPAATAAPSLMNDLPYGAEFGTLVHGVLERIDTDAPDLAAEVRTRCREAAAELLADLDH 903

Query: 865  XXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGE 924
                     +                I  RDRL EL+FE P+ GGD    R A L  + E
Sbjct: 904  GVLATALLAV----LRTPLGFGTLADIAARDRLSELEFELPLGGGDTPAARAATLGAIAE 959

Query: 925  LLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV-GEKFVIVDYKTNWLGT 983
            L+R +L   D L+ Y + L+   L    LRGYL+GS+DAVLR+ G KFV+VDYKTN LGT
Sbjct: 960  LVRAHLGPADDLSGYPDLLAG--LDDVTLRGYLTGSIDAVLRLPGPKFVVVDYKTNRLGT 1017

Query: 984  GDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLYLFV 1043
            GD  LT   Y R RM   ML S YPLQALLY+V LHRYL WRL GYDPA HLGG  YLFV
Sbjct: 1018 GD--LTVGHYTRERMAAEMLRSHYPLQALLYSVALHRYLRWRLPGYDPARHLGGCRYLFV 1075

Query: 1044 RGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLL 1078
            RGM G  TP   GH  GVF W+PP  LV+ALS LL
Sbjct: 1076 RGMIGPETP--PGH--GVFDWDPPVPLVLALSDLL 1106


>tr|D5UQD2|D5UQD2_TSUPA Tax_Id=521096 SubName:
            Full=Exodeoxyribonuclease V; EC=3.1.11.5;[Tsukamurella
            paurometabola DSM 20162]
          Length = 1110

 Score =  623 bits (1607), Expect = e-176
 Identities = 433/1118 (38%), Positives = 567/1118 (50%), Gaps = 67/1118 (5%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            F+L G LPA  TTTVLEASAGTGKT+A+ GL+TR+VAEG+A L   LLITF RAA+QELR
Sbjct: 13   FELTGALPAGATTTVLEASAGTGKTYAIVGLLTRYVAEGLADLGSTLLITFSRAATQELR 72

Query: 64   ERVRAQIVAALVALDDP--SRACND-LEEYLVKTDQQXXXXXXXXXXXXXXXX---TIAT 117
            ER RA++VAA VAL DP  +R C D L  +L     +                   TI T
Sbjct: 73   ERARARLVAAEVALRDPETARVCGDELIRHLAAASPEEVRVRHRRLVAALSDFDAATITT 132

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH FCQ +L +LG+AGD + GV  VE + DLV E+ +D+YL  F G +  P      AL 
Sbjct: 133  THGFCQRMLDALGMAGDLEPGVQFVEDIGDLVQEVAEDVYLGMFAG-RPHPPFPLATALL 191

Query: 178  LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
             AR VV NP   +        +    R+++A  V  E+E RKR   +  +DDL   L +A
Sbjct: 192  YARTVVANPRAAVTPRDGEPGTDVQARVRYAEAVRREVERRKRLGRLRDFDDLQGLLREA 251

Query: 238  L--EPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAF 295
            L  E     A  R+++ + +V+VDEFQDTDPVQW ++  AF G  TLVL+GDPKQAIYAF
Sbjct: 252  LVDEVHGEAACSRLRELYSVVLVDEFQDTDPVQWDILHAAFHGHRTLVLVGDPKQAIYAF 311

Query: 296  RGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQG 355
            RG ++ +YL A+  A   Q L  N RSD  LV  LQ +     LG   IVV  V A    
Sbjct: 312  RGAEVYSYLEASKAATTHQALDVNRRSDGPLVTALQHLYGDVALGDTQIVVGPVSAARTT 371

Query: 356  HRLVGAPRNDPFRLRVVSRK---PGNTRVIP-IDQLRRHIGRDLAADISALLNSGATWCD 411
             RL G     P RLR +      P     IP +  +R+ + RD+A+DI   L++G    D
Sbjct: 372  PRLAGR----PLRLRYLGSNGVGPKTQYGIPRVPGVRKAVLRDVASDIVRALDAGEELDD 427

Query: 412  ----QPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAF 467
                + V+ +DIAV+   ++                V  G + VFT+ AA DWL LL+A 
Sbjct: 428  GGEPRTVEPRDIAVLVRKNEHIAELQSLLQGLGVAAVAAGGASVFTTAAATDWLRLLQAL 487

Query: 468  DQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEA-A 526
            +   R    R AA T  F  TA  L   GD L   ++  LR  AG     G AA+F+  A
Sbjct: 488  ENAGRADRARLAALTPLFEFTARDLDERGDELVSEISGRLRTLAGVFARSGFAAMFDVLA 547

Query: 527  QLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWL--RTQXXXXXXXX 584
              +    R+L   GGER +TDL H+ +L+Q      G GL A   WL  R          
Sbjct: 548  AGSRFDARLLGRIGGERTLTDLRHVAELVQHATVTLGLGLGAATRWLAERIADPGLGGTA 607

Query: 585  XXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNRY--VPEPDLVLFHDDGQRCLHV- 641
                 L +D  AVQ+MTV  SKGLQFP+VYLPFA++ +    + D  +FH++G+R + V 
Sbjct: 608  DPARRLATDTQAVQLMTVHASKGLQFPIVYLPFAWDSFGGFGDRDTFIFHENGERLVDVG 667

Query: 642  ---XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLSRLMRGRA 698
                                    L YV  TRAQS++V WWAPS       L RL+    
Sbjct: 668  GKDAHGYEARLAISRDEDAAEELRLLYVGATRAQSRLVLWWAPSATTKGSPLHRLLFSEV 727

Query: 699  PGEAIVPDKCSPPKISDEDALERLRAWEA-----AGGPVIEESVIGXXXXXXXXXXXXDL 753
             G  +   +   P+  D++A  RLR W A          ++ +                L
Sbjct: 728  GGGRVPAGQAPIPR--DDEAGARLREWAAPVESSVSIEAVDPAAPAPEQWRPPFAGFPSL 785

Query: 754  AARKFFRAIDMAWKRTSYSGLLRAA---ETAGVGVSSEPEVTERDDEFDDIPVVAPAEGA 810
               +  R ID +W+RTSYS L+  A     A     SEP+V +R DE    PV  PA+ A
Sbjct: 786  ELGRATRRIDPSWRRTSYSALVADAAHGPLAAPDTGSEPDVEDRADE----PVEEPADSA 841

Query: 811  DV-----PSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATHIDAHSQHWPXXXXXX 865
                   PS M  L  G  FG+LVH +LE  D  A D+ AE+     A ++         
Sbjct: 842  TTAPDAPPSLMNGLSGGTVFGNLVHEILEHVDTGAPDIAAEVLARCRAAAEFGTTADDPA 901

Query: 866  XXXXXXXP-MHDXXXXXXXXXXXXRQIGLRDRLCELDFEFPMAGGDLRGGRFARLSDVGE 924
                     +H              ++   D L E+DFE P+A         A L  + +
Sbjct: 902  DVAAALTAVLHTPLGTGELSTLTLAEVAPADHLAEMDFELPLADTG-----SATLGTIAD 956

Query: 925  LLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVLRV----GEKFVIVDYKTNW 980
            LL  +LP  DPLA YA RL    +    LRG+L+GS+D+VLRV     ++FVIVDYKTN 
Sbjct: 957  LLERHLPDGDPLAPYASRLRE--VPGAALRGFLTGSIDSVLRVRTGAADRFVIVDYKTNR 1014

Query: 981  LGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLGWRLSGYDPATHLGGVLY 1040
               GD  L+ ADY   RM   M+ S+Y LQALLY+V LHR+L W+L+ Y P  HLG V Y
Sbjct: 1015 FARGD--LSTADYTPDRMAGEMMGSNYVLQALLYSVALHRFLSWKLTDYQPERHLGVVQY 1072

Query: 1041 LFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLL 1078
             FVRGM G  TP       GVF W PPA+L+VA+S  L
Sbjct: 1073 HFVRGMVGPATP----PGCGVFEWYPPAELIVAVSDAL 1106


>tr|D5Z0L0|D5Z0L0_MYCTU Tax_Id=537209 SubName:
           Full=Exodeoxyribonuclease V beta chain;[Mycobacterium
           tuberculosis GM 1503]
          Length = 547

 Score =  616 bits (1588), Expect = e-174
 Identities = 341/547 (62%), Positives = 390/547 (71%), Gaps = 6/547 (1%)

Query: 1   MKVFDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQ 60
           M  F+LLGPLP   TTTVLEASAGTGKTFALAGLVTR++AE  ATLD+MLLITF RAAS+
Sbjct: 1   MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR 60

Query: 61  ELRERVRAQIVAALVALDDPSRACNDLEEYLVK---TDQQXXXXXXXXXXXXXXXXTIAT 117
           ELRERVR QIV A+ AL   +    +L E+L++    ++                 TIAT
Sbjct: 61  ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT 120

Query: 118 THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
           TH+FC  VLKSLGVAGD+ A V L ESL DLV+EIVDD YLA+FG Q+ DPEL+Y EAL 
Sbjct: 121 THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA 180

Query: 178 LARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLADA 237
           LA  VV +P  QL        S AAVRL+FA +VL ELE RK R    G++DLL RLA A
Sbjct: 181 LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA 240

Query: 238 LEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIYAFRG 297
           LE  DSPAR RM++RW IV+VDEFQDTDP+QW+V+ERAFS  S L+LIGDPKQAIY FRG
Sbjct: 241 LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG 300

Query: 298 GDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARHQGHR 357
           GDI TYL+AA TA  + TLG NWRSDRALV+ LQ VLR A LG  DIVV    A H GHR
Sbjct: 301 GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR 360

Query: 358 LVGAPRNDPFRLRVVSRKP---GNTRVIPIDQLRRHIGRDLAADISALLNSGATWCDQPV 414
           L  APR  PFRLRVV R       T  +PI+ LRRHI  DLAAD++ALL SGAT+  +PV
Sbjct: 361 LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV 420

Query: 415 QAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWLYLLEAFDQPHRPG 474
            A DIAVI E HKD               +YTGD+DVF S+AA+DWL LLEAFD P R G
Sbjct: 421 VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG 480

Query: 475 LVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAAIFEAAQLAGMGKR 534
           LVRAAA TMFFGETAESLAA GDALTDRVA TLREWA HA  RGVA +F+A QLAG+  R
Sbjct: 481 LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHALHRGVAPLFQAPQLAGLDLR 540

Query: 535 VLSWQGG 541
           V+S +GG
Sbjct: 541 VMSHRGG 547


>tr|D3FF74|D3FF74_CONWI Tax_Id=469383 SubName:
            Full=Exodeoxyribonuclease V, beta subunit;
            EC=3.1.11.5;[Conexibacter woesei]
          Length = 1132

 Score =  597 bits (1540), Expect = e-168
 Identities = 430/1136 (37%), Positives = 566/1136 (49%), Gaps = 77/1136 (6%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FDL GPLP     TVLEASAGTGKT+A+A L TR+VAEG+  LDQ+L++TF R A+ ELR
Sbjct: 9    FDLCGPLP--EGVTVLEASAGTGKTYAIAALATRYVAEGIP-LDQLLIVTFTRMATGELR 65

Query: 64   ERVRAQIVAALVALDD-PSRACNDLEEYLVK-------TDQQXXXXXXXXXXXXXXXXTI 115
            +RVR ++ +   ALD   + A   + + +V+        +                  TI
Sbjct: 66   DRVRHRLASTREALDAIAAGAAPGVYDEVVRLLASGTSAEVARRRDRIVRALAEFDAATI 125

Query: 116  ATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEA 175
             T H FCQ  L  LG A D D      E + DL  E+VDDLY+  F  +   P     EA
Sbjct: 126  TTIHSFCQEALGELGFAADLDRDHRFQEDVRDLAEEVVDDLYVRGFLTRP--PHFRRAEA 183

Query: 176  LKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTRLA 235
             ++A   + NP+  L        + A +R+  A    AEL+ RKR   ++ +DDLL RL 
Sbjct: 184  GRVALKAIDNPSAVLEPRAAGRSTYAGMRVGLATAARAELDRRKRAAALVTFDDLLLRLR 243

Query: 236  DALE-PEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGR-STLVLIGDPKQAIY 293
            DALE P+      R+ +R+ I +VDEFQDTDP QW ++ RAF+   +TLVLIGDPKQA+Y
Sbjct: 244  DALEGPDGEAVAARLHRRYRIALVDEFQDTDPDQWAIMRRAFAATGTTLVLIGDPKQAVY 303

Query: 294  AFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQ--A 351
            +FRG D+  YL AA  A    TL  NWRSD+ L+D   A+   A+LG  +IV   V+  A
Sbjct: 304  SFRGADVFAYLDAARAADAHPTLRVNWRSDQRLLDAYDALFGAARLGHDEIVYRQVRAAA 363

Query: 352  RHQGHRLVGAPRNDPFRLRVVSRKPGNTRV-----IPIDQLRRHIGRDLAADISALLNSG 406
             ++  RL GAP   P R+RVV R     R+           R ++ RDLAAD+ ALL SG
Sbjct: 364  ANRAPRLHGAPGAAPLRIRVVPRDAPTVRLTSGGTASPASARAYVARDLAADVVALLESG 423

Query: 407  A----------TWCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEA 456
            A               PV   D+AV+   +                 V  G   VF SE+
Sbjct: 424  ARIETRDSDGRAVGHTPVGPGDVAVLVRRNVQAREIKTALEAAGVPAVVAGGGSVFASES 483

Query: 457  AEDWLYLLEAFDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARE 516
            A DWL LL+A ++P      RAAA T F G +A  +AA  +   D +   L  WAG  R 
Sbjct: 484  ARDWLVLLQALERPELLARARAAALTAFLGWSAVRVAAAAEDAWDELQQRLHAWAGVMRR 543

Query: 517  RGVAAIFEA-AQLAGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLRT 575
             GVAA+ E       +  R+L   GGER +TDL H+ +LL   +  E  G+ AL  WLR 
Sbjct: 544  HGVAALTETITSSERVSVRLLEIVGGERRLTDLRHVGELLHAASADEQLGITALAAWLRR 603

Query: 576  Q---XXXXXXXXXXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFNR-YVP-EPDLVL 630
            +                L+SDA AVQ++TV  SKGL+FP+VY P+ ++  ++P EP    
Sbjct: 604  RIEAGDRDADADDRARRLESDAEAVQVLTVHRSKGLEFPIVYCPYLWDPIWIPNEPLPAT 663

Query: 631  FHD---DGQRCLHV-----XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPS 682
            FHD    G R + V                          L YVALTRA+ Q V WWA S
Sbjct: 664  FHDAANGGARTIDVALDEDNQDYRRHQRQDKEEQLGEELRLAYVALTRARHQAVVWWAGS 723

Query: 683  YDEPNGGLSRLMRGR-APGEAIVPDKCSPPKISDEDALERLR--AWEAAGGPVIEE-SVI 738
            +   N  L RL+  R A G        +P   +DE A +R R  A  AAG   +E  +V+
Sbjct: 724  WSSRNSALGRLVFERDADGNVPATGSFTP---TDEAATDRFRQLAAAAAGAIAVERATVV 780

Query: 739  GXXXXXXXXXXXXDLAARKFFRAIDMAWKRTSYSGLLRAAETAGVGVSSEPEVTERDDEF 798
                          L A  F RA+D  W+RTS++ +   A  A   V+SE E     D+ 
Sbjct: 781  DGVRWSPPQEPWTLLEAATFDRALDQRWRRTSFTTITAGAFEA--RVASELEEAPGADDA 838

Query: 799  DDIPVVAPAEGAD-------VPSPMAHLPTGAAFGSLVHAVLETADPFAEDLTAELATHI 851
             +IP++ P+   D         S ++ LP GA  G+ VH+VLE  D  A DL  EL  HI
Sbjct: 839  VEIPLLLPSPSGDDRATASAAVSLLSELPAGARIGTFVHSVLEATDFAASDLDGELTAHI 898

Query: 852  DAHSQHW------PXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDFEFP 905
             A           P             P+ +            R +    RL E+ FE P
Sbjct: 899  GAALDRRRIDVGDPAALAGGLRAAIETPLGE-----LAGGWRLRDLPRSARLDEMGFELP 953

Query: 906  MAGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLSGSVDAVL 965
            + GGD   G    LS V  +LR ++  DDPLA YAERLS   L    LRGYL+G++D V 
Sbjct: 954  LVGGDAPTGELT-LSAVAAVLRAHVAPDDPLAGYAERLSDPALR-SHLRGYLAGAIDLVA 1011

Query: 966  R--VGEKFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVVLHRYLG 1023
            R   G  + IVDYKTN L      LT   Y    +   M  S Y LQALLYAV LHRYL 
Sbjct: 1012 RRAEGVPYAIVDYKTNRLAAAGEALTPWHYRPAALAIEMQRSHYVLQALLYAVALHRYLR 1071

Query: 1024 WRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKLLD 1079
            WR+  + P      ++Y F+RGM G+ TPV+DG P GVF+W PP  LV ALS + +
Sbjct: 1072 WRVEDHHPDRDRPLIVYAFLRGMAGSATPVLDGAPCGVFAWRPPEGLVPALSDVFE 1127


>tr|D0L8X3|D0L8X3_GORB4 Tax_Id=526226 SubName:
            Full=Exodeoxyribonuclease V; EC=3.1.11.5;[Gordonia
            bronchialis]
          Length = 1134

 Score =  565 bits (1455), Expect = e-158
 Identities = 420/1141 (36%), Positives = 559/1141 (48%), Gaps = 88/1141 (7%)

Query: 4    FDLLGPLPAPNTTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFGRAASQELR 63
            FD+   LPA   TTVLEASAGTGKT+A+  L  R++AEGV  +  MLL+TF RAA+ ELR
Sbjct: 11   FDIAEDLPAQ--TTVLEASAGTGKTYAIVSLAARYLAEGVP-ISGMLLVTFSRAATAELR 67

Query: 64   ERVRAQIVAALVALDDPSRACNDLEEYL------VKTDQQXXXXXXXXXXXXXXXXTIAT 117
            ER+R ++   +  L DP+ A    ++           D                  TIAT
Sbjct: 68   ERMRERVHGLVGVLADPASAAQSADQLHRLLAAGTAEDVARRRAHLVRALSDFDASTIAT 127

Query: 118  THQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYPEALK 177
            TH FC  +L++LG  G+ +    +VE +D+L  E+  DLYL  F    + P+ S  EA +
Sbjct: 128  THTFCNRMLEALGFLGEREMVYRIVEEVDELTDEVALDLYLRGFS-TSEAPDFSLAEAQR 186

Query: 178  LARVVVGNPATQLXXXXXXXXSP------AAVRLKFARDVLAELEIRKRRRGVLGYDDLL 231
            +AR  V   A  L                AA R++FA  V   +E RKR   +  YDDL 
Sbjct: 187  IARDAVRQAAVALAPEAAELQDAGEPGRVAARRVRFAARVRQIVEARKRTSRLRTYDDLQ 246

Query: 232  TRLADALEPED--SPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPK 289
            T L   +   D    A  R++  + + +VDEFQDTDP+QW ++ R F G   LVL+GDPK
Sbjct: 247  TILHRIITDPDVGEAACRRIRSTFAVALVDEFQDTDPLQWDIVRRCFHGHRRLVLVGDPK 306

Query: 290  QAIYAFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDV 349
            Q+IY FRG ++ +YL A  +A   + L TN RSD  LV  L  +  GA LG P IVVH V
Sbjct: 307  QSIYGFRGAEVLSYLSAVRSADTLRALDTNRRSDGDLVASLWTLYGGATLGHPGIVVHPV 366

Query: 350  QARHQGHRLVGAPRNDPFRLRVVSRKPGN----TRVIPIDQLRRHIGRDLAADISALLNS 405
             A H G RL GA    P ++R   R   N      V      R  I  D+A  IS+ L++
Sbjct: 367  GAAHAGSRLDGAV---PMQVRAFMRTDFNRLNSLGVPSAPDARARITTDVADHISSALSA 423

Query: 406  GAT----WCDQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAEDWL 461
            G T       +PV+  DIAV+   +K                V     +VF + AA+ WL
Sbjct: 424  GMTIVVDGARRPVEPGDIAVLVRQNKTIEPLQTALAARGVNAVIGSGVNVFETSAAQHWL 483

Query: 462  YLLEAFDQPHRPGLVRAAAATMFFGETAESLAAGGDALTDRVADTLREWAGHARERGVAA 521
            ++L A +QP RP  VR AA T   G T E LA   +  T  +            E G AA
Sbjct: 484  WVLRAVEQPSRPDRVRLAALTPLLGWTPERLAVQAETGTAELGAGFAALGQVFGECGFAA 543

Query: 522  IFEAAQL-AGMGKRVLSWQGGERLMTDLAHMTQLLQDTAHREGFGLAALRDWLR---TQX 577
            + +       +  RVL+ +GGERL+TDL  ++ L        G G++ L +WL       
Sbjct: 544  MAQRLMAQENVAARVLAMRGGERLLTDLLQISALCNKQVVESGEGISGLVEWLADRIADS 603

Query: 578  XXXXXXXXXXXXLDSDAAAVQIMTVWVSKGLQFPVVYLPFAFN-RYVPEPDLVLFHDD-G 635
                        L+ D  AVQIMTV  SKGLQFP+VY+PF ++  ++ E   + FHDD G
Sbjct: 604  SRRQRHEDQSRRLERDTEAVQIMTVHASKGLQFPIVYVPFGWDGTWIDEEGDLTFHDDEG 663

Query: 636  QRCLHV----XXXXXXXXXXXXXXXXXXXXXLTYVALTRAQSQVVAWWAPSYDEPNGGLS 691
             R L V                         L YVALTRAQSQVV WWAP+ + P G L 
Sbjct: 664  TRLLDVAGPGAPGRGTRRARYAEEVAGEDLRLLYVALTRAQSQVVTWWAPTANTPTGPLH 723

Query: 692  RLM--RGRAPGEAIVPDKCSPPKIS-------DEDALERLRAWEAAGGPVIEESVIGXXX 742
            RL+  R RA  E    D  +P  ++       D + +  LR   A     IE S  G   
Sbjct: 724  RLIFGRQRALAERSGTDPQAPWTVAKSVDVPDDVECVTVLRQL-AERDSRIEVSPAGRLP 782

Query: 743  XXXXXXXXXD------LAARKFFRAIDMAWKRTSYSGLLRAAE--TAGVGVSSEPEVTER 794
                     D      L+A  F R ID  W+RTSYS ++  A    + V   SE +    
Sbjct: 783  TPPAGPAGDDPADLPVLSAAAFDRRIDQQWRRTSYSAIIAGAAHGPSAVETGSERDGARL 842

Query: 795  DDEFDDIPVVAP------------AEGADVPSPMAHLPTGAAFGSLVHAVLETADPFAED 842
            D   DD P+ AP             E    PSPM+ L  GA FG+LVH VLE  D  A D
Sbjct: 843  DTALDDEPIEAPEPLAGNVIEDESGERTGTPSPMSGLSFGAGFGTLVHEVLEYVDTSAPD 902

Query: 843  LTAELATHIDAHSQHWPXXXXXXXXXXXXXPMHDXXXXXXXXXXXXRQIGLRDRLCELDF 902
            + + +A  +   +                                   I  RDRL ELDF
Sbjct: 903  IRSHVAQLVARAA----GVRGGTVDVNVLTDALVGVLTTPLGFGDLWSIAPRDRLAELDF 958

Query: 903  EFPM----AGGDLRGGRFARLSDVGELLREYLPADDPLAVYAERLSTGILGVQPLRGYLS 958
            E P+    A  +   G  A ++++ +L+  +L ADDPL  YA+ L  G+   + LRG+L+
Sbjct: 959  ELPLGDDAASDETETG--ATVAEIADLMDRHLGADDPLRPYAQVL-RGVPAAR-LRGFLT 1014

Query: 959  GSVDAVLRVGE-KFVIVDYKTNWLGTGDGTLTAADYGRRRMVEAMLHSDYPLQALLYAVV 1017
            GS+D+VLRV + ++V+VDYKTN L  G+  L   D+    M   M+H+ YPLQALLY+V 
Sbjct: 1015 GSIDSVLRVPDGRYVVVDYKTNRLRPGE--LMVEDFHSGAMATEMIHAHYPLQALLYSVA 1072

Query: 1018 LHRYLGWRLSGYDPATHLGGVLYLFVRGMCGAGTPVVDGHPAGVFSWEPPADLVVALSKL 1077
            LHRYL WR++GY P  HLGGV Y FVRGM G  TP       GVF W+PP++LV A+S L
Sbjct: 1073 LHRYLRWRIAGYTPEHHLGGVQYHFVRGMAGPSTP----PGCGVFEWKPPSELVTAISDL 1128

Query: 1078 L 1078
            L
Sbjct: 1129 L 1129


>tr|Q73SI0|Q73SI0_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 378

 Score =  473 bits (1216), Expect = e-131
 Identities = 249/349 (71%), Positives = 277/349 (79%), Gaps = 3/349 (0%)

Query: 114 TIATTHQFCQIVLKSLGVAGDSDAGVTLVESLDDLVSEIVDDLYLAHFGGQKDDPELSYP 173
           TIATTHQFCQ+VL+SLGVAGD+ AGVTL++SLD+LV+EIVDDLYLAHFG   DDP L Y 
Sbjct: 30  TIATTHQFCQLVLRSLGVAGDTAAGVTLLDSLDELVAEIVDDLYLAHFGQDHDDPVLHYR 89

Query: 174 EALKLARVVVGNPATQLXXXXXXXXSPAAVRLKFARDVLAELEIRKRRRGVLGYDDLLTR 233
           EAL+LAR VV NP+ QL        S AAV L+FA DVLAEL+ RKRR GVLGYDDLLTR
Sbjct: 90  EALRLARDVVNNPSAQLRPLHPEPGSRAAVSLRFANDVLAELDTRKRRLGVLGYDDLLTR 149

Query: 234 LADALEPEDSPARVRMQQRWPIVMVDEFQDTDPVQWQVIERAFSGRSTLVLIGDPKQAIY 293
           LADAL  E SPAR+RM QRWPIVMVDEFQDTDPVQWQVI+RAFSGRSTL+LIGDPKQAIY
Sbjct: 150 LADALATEHSPARLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTLILIGDPKQAIY 209

Query: 294 AFRGGDIATYLRAAATAGDKQTLGTNWRSDRALVDRLQAVLRGAQLGGPDIVVHDVQARH 353
           AFRGGDI TYLRAA TAG K+TL TNWRSD AL+ RLQ VLRGAQLG P I V+DV A H
Sbjct: 210 AFRGGDIVTYLRAAETAGQKKTLDTNWRSDSALLQRLQVVLRGAQLGDPAIAVNDVAAHH 269

Query: 354 QGHRLVGAPRNDPFRLRVVSRKPGNTRVI---PIDQLRRHIGRDLAADISALLNSGATWC 410
           +GHRL GAPRNDPFRLRVVSR     R I   PID+LR+HIG DLAADI ALL +GAT+ 
Sbjct: 270 RGHRLSGAPRNDPFRLRVVSRNTLGRRGIANLPIDELRQHIGADLAADIRALLAAGATFD 329

Query: 411 DQPVQAKDIAVITETHKDXXXXXXXXXXXXXXXVYTGDSDVFTSEAAED 459
            +P++A DIAVI E H+D               VYTG+SDVFTS+AAED
Sbjct: 330 GKPLRAGDIAVIVERHRDAQACFTALCDAGVPAVYTGNSDVFTSQAAED 378


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.320    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 8,243,099,134
Number of extensions: 337016313
Number of successful extensions: 825477
Number of sequences better than 10.0: 6557
Number of HSP's gapped: 820135
Number of HSP's successfully gapped: 9423
Length of query: 1083
Length of database: 4,236,830,644
Length adjustment: 149
Effective length of query: 934
Effective length of database: 2,373,158,908
Effective search space: 2216530420072
Effective search space used: 2216530420072
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 86 (37.7 bits)