BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_1328
         (1087 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QS30|A0QS30_MYCS2 Tax_Id=246196 (recC)SubName: Full=Exodeox...  2034   0.0  
tr|Q9RPH7|Q9RPH7_MYCSM Tax_Id=1772 (recC)SubName: Full=RecC;[Myc...  2031   0.0  
tr|B1MFU9|B1MFU9_MYCA9 Tax_Id=561007 SubName: Full=Exodeoxyribon...  1514   0.0  
tr|D5PC42|D5PC42_9MYCO Tax_Id=525368 (recC)SubName: Full=Exodeox...  1434   0.0  
tr|Q73SH9|Q73SH9_MYCPA Tax_Id=1770 (recC)SubName: Full=RecC;[Myc...  1422   0.0  
tr|A0QL85|A0QL85_MYCA1 Tax_Id=243243 (recC)SubName: Full=Exodeox...  1420   0.0  
tr|B2HSF7|B2HSF7_MYCMM Tax_Id=216594 (recC)SubName: Full=Exodeox...  1416   0.0  
tr|A0PLZ4|A0PLZ4_MYCUA Tax_Id=362242 (recC)SubName: Full=Exodeox...  1409   0.0  
tr|A3PUY9|A3PUY9_MYCSJ Tax_Id=164757 SubName: Full=DNA helicase/...  1408   0.0  
tr|Q1BDL7|Q1BDL7_MYCSS Tax_Id=164756 SubName: Full=DNA helicase/...  1399   0.0  
tr|A1UBC4|A1UBC4_MYCSK Tax_Id=189918 SubName: Full=DNA helicase/...  1399   0.0  
tr|A1T4E5|A1T4E5_MYCVP Tax_Id=350058 SubName: Full=DNA helicase/...  1339   0.0  
tr|A4T1L2|A4T1L2_MYCGI Tax_Id=350054 SubName: Full=DNA helicase/...  1335   0.0  
sp|P96921|EX5C_MYCTU Tax_Id=1773 (recC)RecName: Full=Exodeoxyrib...  1293   0.0  
tr|A5U014|A5U014_MYCTA Tax_Id=419947 (recC)SubName: Full=Exodeox...  1293   0.0  
tr|D6F1P1|D6F1P1_MYCTU Tax_Id=611302 SubName: Full=Exodeoxyribon...  1293   0.0  
tr|D5ZD20|D5ZD20_MYCTU Tax_Id=537210 SubName: Full=Exonuclease s...  1293   0.0  
tr|D5YCX2|D5YCX2_MYCTU Tax_Id=520140 SubName: Full=Exonuclease s...  1293   0.0  
tr|A4KEV8|A4KEV8_MYCTU Tax_Id=395095 SubName: Full=Exonuclease V...  1293   0.0  
tr|C6DU08|C6DU08_MYCTK Tax_Id=478434 SubName: Full=Exonuclease s...  1290   0.0  
tr|A5WJZ6|A5WJZ6_MYCTF Tax_Id=336982 SubName: Full=Exonuclease V...  1290   0.0  
tr|D6FZS8|D6FZS8_MYCTU Tax_Id=478435 SubName: Full=Exonuclease s...  1290   0.0  
tr|D5Z0L1|D5Z0L1_MYCTU Tax_Id=537209 SubName: Full=Exonuclease V...  1290   0.0  
tr|C1AKW2|C1AKW2_MYCBT Tax_Id=561275 (recC)SubName: Full=Putativ...  1290   0.0  
tr|A1KGA9|A1KGA9_MYCBP Tax_Id=410289 (recC)SubName: Full=PRobabl...  1290   0.0  
tr|D6FME2|D6FME2_MYCTU Tax_Id=611304 SubName: Full=Exonuclease s...  1290   0.0  
tr|D6FED7|D6FED7_MYCTU Tax_Id=611303 SubName: Full=Exonuclease s...  1290   0.0  
tr|Q7U1K9|Q7U1K9_MYCBO Tax_Id=1765 (recC)SubName: Full=PROBABLE ...  1286   0.0  
tr|D2PR48|D2PR48_KRIFD Tax_Id=479435 SubName: Full=Exodeoxyribon...  1215   0.0  
tr|D5YNT1|D5YNT1_MYCTU Tax_Id=515616 SubName: Full=Exonuclease s...  1190   0.0  
tr|D5Y0V5|D5Y0V5_MYCTU Tax_Id=520141 SubName: Full=Exodeoxyribon...  1110   0.0  
tr|A1SDB1|A1SDB1_NOCSJ Tax_Id=196162 SubName: Full=DNA helicase/...   932   0.0  
tr|D5XQQ8|D5XQQ8_MYCTU Tax_Id=515617 SubName: Full=Exonuclease s...   868   0.0  
tr|C8XGX0|C8XGX0_NAKMY Tax_Id=479431 SubName: Full=Exodeoxyribon...   860   0.0  
tr|Q0SFN7|Q0SFN7_RHOSR Tax_Id=101510 (recC)SubName: Full=Exodeox...   795   0.0  
tr|C1AXR3|C1AXR3_RHOOB Tax_Id=632772 (recC)SubName: Full=Exodeox...   783   0.0  
tr|C3JUW8|C3JUW8_RHOER Tax_Id=596309 (recC)SubName: Full=Exodeox...   775   0.0  
tr|C0ZQ87|C0ZQ87_RHOE4 Tax_Id=234621 (recC)SubName: Full=Exodeox...   770   0.0  
tr|Q5YWP9|Q5YWP9_NOCFA Tax_Id=37329 (recC)SubName: Full=Putative...   766   0.0  
tr|D5PVW0|D5PVW0_COREQ Tax_Id=525370 (recC)SubName: Full=Exodeox...   760   0.0  
tr|D5UHJ7|D5UHJ7_9CELL Tax_Id=446466 SubName: Full=Exodeoxyribon...   706   0.0  
tr|D0L8X4|D0L8X4_GORB4 Tax_Id=526226 SubName: Full=Exodeoxyribon...   669   0.0  
tr|D3FF73|D3FF73_CONWI Tax_Id=469383 SubName: Full=Exodeoxyribon...   663   0.0  
tr|D5UQD3|D5UQD3_TSUPA Tax_Id=521096 SubName: Full=Exodeoxyribon...   651   0.0  
tr|A6W6P1|A6W6P1_KINRD Tax_Id=266940 SubName: Full=Exodeoxyribon...   627   e-177

>tr|A0QS30|A0QS30_MYCS2 Tax_Id=246196 (recC)SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Mycobacterium smegmatis]
          Length = 1087

 Score = 2034 bits (5270), Expect = 0.0
 Identities = 1010/1087 (92%), Positives = 1010/1087 (92%)

Query: 1    MSMALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLGVCA 60
            MSMALHLHRAERT                  FATELVLVPAKGVERWLSQRLSNRLGVCA
Sbjct: 1    MSMALHLHRAERTDLLADGLAALLSDPLPDPFATELVLVPAKGVERWLSQRLSNRLGVCA 60

Query: 61   AVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMGEE 120
            AVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMGEE
Sbjct: 61   AVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMGEE 120

Query: 121  YELRQGRRYAVARRLAGLFASYARQRPQLLVDWDGLPDDLAWQKALWQALCERIDADPPH 180
            YELRQGRRYAVARRLAGLFASYARQRPQLLVDWDGLPDDLAWQKALWQALCERIDADPPH
Sbjct: 121  YELRQGRRYAVARRLAGLFASYARQRPQLLVDWDGLPDDLAWQKALWQALCERIDADPPH 180

Query: 181  IRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXXPHPSDTLWQA 240
            IRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVE               PHPSDTLWQA
Sbjct: 181  IRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVELLTALATHHDLHLWLPHPSDTLWQA 240

Query: 241  LSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPDTLLGWL 300
            LSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPDTLLGWL
Sbjct: 241  LSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPDTLLGWL 300

Query: 301  QSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVM 360
            QSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVM
Sbjct: 301  QSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVM 360

Query: 361  CPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPXXXXXXX 420
            CPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNP       
Sbjct: 361  CPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPLLAVAAQ 420

Query: 421  XXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGV 480
                 GGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGV
Sbjct: 421  LLALAGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGV 480

Query: 481  EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVD 540
            EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVD
Sbjct: 481  EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVD 540

Query: 541  QLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITARAGDTATSXXXXXXXXX 600
            QLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITARAGDTATS         
Sbjct: 541  QLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITARAGDTATSLRLADVRAL 600

Query: 601  XXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARD 660
                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARD
Sbjct: 601  LDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARD 660

Query: 661  PMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTE 720
            PMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTE
Sbjct: 661  PMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTE 720

Query: 721  DSALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFSXXXX 780
            DSALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFS    
Sbjct: 721  DSALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFSDPLP 780

Query: 781  XXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLS 840
                         NFFKDPVKGFFRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLS
Sbjct: 781  PPLPDDVALEDLLNFFKDPVKGFFRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLS 840

Query: 841  DILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDI 900
            DILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDI
Sbjct: 841  DILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDI 900

Query: 901  DLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRP 960
            DLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRP
Sbjct: 901  DLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRP 960

Query: 961  ARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQKA 1020
            ARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQKA
Sbjct: 961  ARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQKA 1020

Query: 1021 GFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLL 1080
            GFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLL
Sbjct: 1021 GFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLL 1080

Query: 1081 RAERPVR 1087
            RAERPVR
Sbjct: 1081 RAERPVR 1087


>tr|Q9RPH7|Q9RPH7_MYCSM Tax_Id=1772 (recC)SubName:
            Full=RecC;[Mycobacterium smegmatis]
          Length = 1085

 Score = 2031 bits (5261), Expect = 0.0
 Identities = 1008/1085 (92%), Positives = 1008/1085 (92%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLGVCAAV 62
            MALHLHRAERT                  FATELVLVPAKGVERWLSQRLSNRLGVCAAV
Sbjct: 1    MALHLHRAERTDLLADGLAALLSDPLPDPFATELVLVPAKGVERWLSQRLSNRLGVCAAV 60

Query: 63   EFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMGEEYE 122
            EFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMGEEYE
Sbjct: 61   EFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMGEEYE 120

Query: 123  LRQGRRYAVARRLAGLFASYARQRPQLLVDWDGLPDDLAWQKALWQALCERIDADPPHIR 182
            LRQGRRYAVARRLAGLFASYARQRPQLLVDWDGLPDDLAWQKALWQALCERIDADPPHIR
Sbjct: 121  LRQGRRYAVARRLAGLFASYARQRPQLLVDWDGLPDDLAWQKALWQALCERIDADPPHIR 180

Query: 183  HAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXXPHPSDTLWQALS 242
            HAKTLVQLHESPTDLPQRLSLFGHTRLPATEVE               PHPSDTLWQALS
Sbjct: 181  HAKTLVQLHESPTDLPQRLSLFGHTRLPATEVELLTALATHHDLHLWLPHPSDTLWQALS 240

Query: 243  TRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPDTLLGWLQS 302
            TRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPDTLLGWLQS
Sbjct: 241  TRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPDTLLGWLQS 300

Query: 303  DIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVMCP 362
            DIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVMCP
Sbjct: 301  DIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVMCP 360

Query: 363  DIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPXXXXXXXXX 422
            DIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNP         
Sbjct: 361  DIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPLLAVAAQLL 420

Query: 423  XXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGVEF 482
               GGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGVEF
Sbjct: 421  ALAGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGVEF 480

Query: 483  LHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVDQL 542
            LHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVDQL
Sbjct: 481  LHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVDQL 540

Query: 543  SGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITARAGDTATSXXXXXXXXXXX 602
            SGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITARAGDTATS           
Sbjct: 541  SGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITARAGDTATSLRLADVRALLD 600

Query: 603  XXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPM 662
                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPM
Sbjct: 601  RHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPM 660

Query: 663  TGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTEDS 722
            TGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTEDS
Sbjct: 661  TGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTEDS 720

Query: 723  ALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFSXXXXXX 782
            ALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFS      
Sbjct: 721  ALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFSDPLPPP 780

Query: 783  XXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDI 842
                       NFFKDPVKGFFRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDI
Sbjct: 781  LPDDVALEDLLNFFKDPVKGFFRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDI 840

Query: 843  LRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDL 902
            LRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDL
Sbjct: 841  LRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDL 900

Query: 903  GGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPAR 962
            GGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPAR
Sbjct: 901  GGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPAR 960

Query: 963  GTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQKAGF 1022
            GTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQKAGF
Sbjct: 961  GTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQKAGF 1020

Query: 1023 RWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLLRA 1082
            RWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLLRA
Sbjct: 1021 RWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLLRA 1080

Query: 1083 ERPVR 1087
            ERPVR
Sbjct: 1081 ERPVR 1085


>tr|B1MFU9|B1MFU9_MYCA9 Tax_Id=561007 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit
            (RecC);[Mycobacterium abscessus]
          Length = 1077

 Score = 1514 bits (3919), Expect = 0.0
 Identities = 763/1086 (70%), Positives = 849/1086 (78%), Gaps = 15/1086 (1%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLGVCAAV 62
            MALHL RAERT                  FA ELVLVPAKG+ERWLSQRLS+RLGVCA V
Sbjct: 1    MALHLRRAERTDMLADGLARLLAVPAPDPFAEELVLVPAKGIERWLSQRLSDRLGVCAGV 60

Query: 63   EFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMGEEYE 122
             FR+PRSLIAE+TGT D+DPWSPDA+VWPLL VIDE+L + W   LA+HLG FE GEE E
Sbjct: 61   RFRSPRSLIAEITGTVDNDPWSPDALVWPLLTVIDENLHQSWAVPLASHLGAFEAGEERE 120

Query: 123  LRQGRRYAVARRLAGLFASYARQRPQLLVDW-DGLP--DDLAWQKALWQALCERIDADPP 179
            LRQGRRYAVARRLAGLFASYARQRP+LLV W DG P   DLAWQ  LW+AL  R+DA PP
Sbjct: 121  LRQGRRYAVARRLAGLFASYARQRPELLVSWLDGDPAEPDLAWQPPLWRALVARVDAVPP 180

Query: 180  HIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXXPHPSDTLWQ 239
            H+RH +   +L E+P+DLP R+SLFGHTRLP T++E               PHPSD LWQ
Sbjct: 181  HVRHDRVRARLREAPSDLPPRISLFGHTRLPVTDIELLDALATHHDLYLWLPHPSDALWQ 240

Query: 240  ALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPDTLLGW 299
             L++  GP+PRRED +HR V HPLLATLGRD+RE+QR LPEP +DE+   + + D+LLGW
Sbjct: 241  TLASDHGPVPRREDIAHRSVRHPLLATLGRDVRELQRALPEPTSDEYLSGTTFSDSLLGW 300

Query: 300  LQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILV 359
            LQSD+AAD VRPQGR     D ++QVHSCHGP+RQIDVLREVLLGLLADDPTLEPRDILV
Sbjct: 301  LQSDLAADEVRPQGRALAAHDHTVQVHSCHGPARQIDVLREVLLGLLADDPTLEPRDILV 360

Query: 360  MCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPXXXXXX 419
            MCPDIETYAPLI+A FGLG+ VP          AHPAH+LRVRLADRALVQTNP      
Sbjct: 361  MCPDIETYAPLISARFGLGESVP---------GAHPAHQLRVRLADRALVQTNPLLTVAG 411

Query: 420  XXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYG 479
                   GRATASEVLNLAES+PVR RFGFTDDDLDAITAW REANIRWGFD EHR PYG
Sbjct: 412  QILSLASGRATASEVLNLAESSPVRMRFGFTDDDLDAITAWVREANIRWGFDPEHRAPYG 471

Query: 480  VEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTV 539
            V+FLHNTWRFGIDRVLAGVA+S+D+HAWLG TLPLDDVSSNRVELAGRFA+FV +L  TV
Sbjct: 472  VDFLHNTWRFGIDRVLAGVALSEDAHAWLGATLPLDDVSSNRVELAGRFAEFVSQLHTTV 531

Query: 540  DQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITARAGDTATSXXXXXXXX 599
              LSGTRPL EWL  L+ GIDALA   EDWP AQM REFAEI   A     S        
Sbjct: 532  TALSGTRPLAEWLTILSTGIDALATDSEDWPRAQMLREFAEIQDAA--VPVSLRLSDIRA 589

Query: 600  XXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALAR 659
                   GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALAR
Sbjct: 590  LLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALAR 649

Query: 660  DPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITT 719
            DPMTGERDIRSEDRQLLLDAI AAT+TLV+TYTGANEYSGQARPPAVPLAEL+DTL ITT
Sbjct: 650  DPMTGERDIRSEDRQLLLDAIGAATETLVLTYTGANEYSGQARPPAVPLAELLDTLDITT 709

Query: 720  EDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFSXX 778
                 D +   HPLQPFD RNV PG+++P  PFTFD TAL+AARA++G RA RP F    
Sbjct: 710  SQPVRDRIHITHPLQPFDIRNVTPGSVIPGHPFTFDSTALIAARAAAGARAERPPFICGP 769

Query: 779  XXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRM 838
                            FF  P+KGFFRALDYTLPWDV+GVSD MPV+IDALEEWTVGDR+
Sbjct: 770  LPALDVTDVALTDLAAFFNHPIKGFFRALDYTLPWDVDGVSDDMPVEIDALEEWTVGDRL 829

Query: 839  LSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDV 898
            L+D+LRGMTPA AQQAEWRRGTLPPGQLGWRR   LR++CA LAAE  G++  D +A+D+
Sbjct: 830  LADMLRGMTPADAQQAEWRRGTLPPGQLGWRRVSELRERCAALAAETRGYQTDDSRAFDI 889

Query: 899  DIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIG 958
            DIDLG GRRL GTVSPVFG+RLVSVTYS+L  KHLLQSWIPL+AL+A    RDW AVCIG
Sbjct: 890  DIDLGDGRRLAGTVSPVFGERLVSVTYSRLDAKHLLQSWIPLVALSAHDHQRDWSAVCIG 949

Query: 959  RPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQ 1018
            R  RG  P V  LG P +P+ +L  LVAIYDAGRREPLPLP+KTSYAWA+AR   DDPE 
Sbjct: 950  RARRGPQPLVRSLGRPMDPLGVLRGLVAIYDAGRREPLPLPLKTSYAWAQARRDRDDPEL 1009

Query: 1019 KAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLP 1078
            +AG+RWRSG +PGEDA+PA  RA+G+  WLR LMQPLRPGEE EGET+RLGAYS+RLWLP
Sbjct: 1010 QAGYRWRSGNFPGEDADPAVERAFGQGVWLRHLMQPLRPGEETEGETNRLGAYSARLWLP 1069

Query: 1079 LLRAER 1084
            LLRAER
Sbjct: 1070 LLRAER 1075


>tr|D5PC42|D5PC42_9MYCO Tax_Id=525368 (recC)SubName:
            Full=Exodeoxyribonuclease V gamma subunit;
            EC=3.1.11.5;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 1090

 Score = 1434 bits (3712), Expect = 0.0
 Identities = 743/1104 (67%), Positives = 828/1104 (75%), Gaps = 33/1104 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLVPA+GVERWLSQRLS+ LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLAHPLTDPFAEELVLVPARGVERWLSQRLSHVLGRARGG 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              VCA V FR+P SLIAELTGTAD+DPWSPDAM WPLL VID SLDEPWC TLATHLGHF
Sbjct: 61   DGVCAGVAFRSPASLIAELTGTADEDPWSPDAMAWPLLAVIDSSLDEPWCRTLATHLGHF 120

Query: 116  EMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-----DGLPDDLAWQKALWQA 169
               E E ELR+GRRY+VARRLAGLFASYARQRP+LL DW       L  DLAWQ  LW+A
Sbjct: 121  APTEAEAELRRGRRYSVARRLAGLFASYARQRPRLLADWLAGDAGDLDPDLAWQPELWRA 180

Query: 170  LCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXX 229
            L   + ADPPH+RH  T+ +L + P  LP RLSLFGHTRL +T+VE              
Sbjct: 181  LVAAVPADPPHVRHHNTVTRLRDGPGGLPPRLSLFGHTRLASTDVELLDAVAAHHDLHLW 240

Query: 230  XPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEP-DTDEFRG 288
             PHPSD LW+AL   +G +PRR DTSHR VGHPLLATLGRDLRE+QR LP    TDE   
Sbjct: 241  LPHPSDHLWRALGGDRGAIPRRADTSHRSVGHPLLATLGRDLRELQRALPAAAQTDECLP 300

Query: 289  RSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLAD 348
                P TLLGWLQ+DIAA+AVRPQGR    +DRS+QVH+CHGP+RQ+DVLREVLLGLL D
Sbjct: 301  APARPATLLGWLQADIAANAVRPQGRILAADDRSVQVHNCHGPARQVDVLREVLLGLLQD 360

Query: 349  DPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRAL 408
            DPTL+PRDILVMCPDIETYAPLI A FGLGDVV           AHPAH+LRVRLADR+ 
Sbjct: 361  DPTLQPRDILVMCPDIETYAPLIVADFGLGDVVH---------GAHPAHRLRVRLADRSP 411

Query: 409  VQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRW 468
            +QTNP            G R TASEVL+ AE+APVRARFG TDDDL+AI  W R+ANIRW
Sbjct: 412  LQTNPLLGVAAQLLALAGSRVTASEVLDFAEAAPVRARFGLTDDDLEAIARWVRQANIRW 471

Query: 469  GFDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRF 528
            GFDQEHRRPY V+F+HNTWRFGIDRVLAGVAMSDDSHAW+  TLPLDDVSSNRVELAG+F
Sbjct: 472  GFDQEHRRPYHVDFVHNTWRFGIDRVLAGVAMSDDSHAWIDATLPLDDVSSNRVELAGQF 531

Query: 529  ADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALA-LADED-WPAAQMQREFAEITARAG 586
            A+FV +L+R VD L+G R L +WL AL  G+D L  +AD D W   Q+QREFA   A AG
Sbjct: 532  AEFVARLQRVVDSLTGARALRDWLAALAEGVDLLTRVADADLWQTGQLQREFASALADAG 591

Query: 587  DTA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF 645
              A T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF
Sbjct: 592  PRADTVLRLPDVRVLLDGRLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF 651

Query: 646  PRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPA 705
            PRLG VDGDDALARDPMTGERDIRSEDRQLLLDAI AAT+ LVITYTGANEYSGQ RPPA
Sbjct: 652  PRLGVVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPA 711

Query: 706  VPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARAS 764
            VPLAEL+DTL  TT     D ++  HPLQPFD RNV+PGALVPD PF+FD T L AARA+
Sbjct: 712  VPLAELLDTLDSTTAGRVRDRIVVAHPLQPFDIRNVVPGALVPDVPFSFDPTVLRAARAA 771

Query: 765  SGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPV 824
            +GER  +P F S                  FFKDPVKGFFRAL++TLP DV+GV D MPV
Sbjct: 772  TGERGEKPRFISGPLPPPPAGDVILADLVGFFKDPVKGFFRALEFTLPRDVDGVQDAMPV 831

Query: 825  DIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAE 884
            D+D LEEWTVGDRML DILRG TP  A+QAEWRRGTLPPGQLGWR A  +RDQ ALLAA 
Sbjct: 832  DLDGLEEWTVGDRMLGDILRGWTPDDARQAEWRRGTLPPGQLGWRTATDIRDQAALLAAA 891

Query: 885  ALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
            A   R  D  AYDVD+DLG GRRLTGTVSPV+GDRLVSVTYSKL GKHLL+SWIPLLAL 
Sbjct: 892  AREHRGPDASAYDVDVDLGSGRRLTGTVSPVYGDRLVSVTYSKLDGKHLLESWIPLLALF 951

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGP-DNPVDLLADLVAIYDAGRREPLPLPVKTS 1003
            A  P RDW A+CIGR  RGT PRVEGLG P ++ V +L +LVA+YDAGRREP+PLPVKTS
Sbjct: 952  AHDPGRDWSAICIGRRKRGTAPRVEGLGRPREDAVAVLRELVAVYDAGRREPIPLPVKTS 1011

Query: 1004 YAWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEG 1063
            YAWA ARHCGDDP ++A +RW+      E  EPAHVRAWGR+  L +LM+P+R GEE +G
Sbjct: 1012 YAWAAARHCGDDPLREAQYRWKY-----EHEEPAHVRAWGRNTRLAELMRPVRAGEECDG 1066

Query: 1064 ETHRLGAYSSRLWLPLLRAERPVR 1087
            E  RLGAY++R+WLP+LRAE  V+
Sbjct: 1067 EDTRLGAYAARVWLPMLRAEGAVK 1090


>tr|Q73SH9|Q73SH9_MYCPA Tax_Id=1770 (recC)SubName:
            Full=RecC;[Mycobacterium paratuberculosis]
          Length = 1096

 Score = 1422 bits (3681), Expect = 0.0
 Identities = 729/1102 (66%), Positives = 837/1102 (75%), Gaps = 29/1102 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M LHLHRAERT                  FA ELV+VPA+GVERWLSQRLS+ LG     
Sbjct: 1    MPLHLHRAERTDLLADGLGALLANPPADPFALELVVVPARGVERWLSQRLSHVLGRARDG 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              VCA V+FR+P SLIAE+TGTADDDPWSPDA+ WPLL  ID SLDEPWC TLATHLGHF
Sbjct: 61   DGVCAGVQFRSPGSLIAEITGTADDDPWSPDALAWPLLEAIDCSLDEPWCRTLATHLGHF 120

Query: 116  EMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DGLP----DDLAWQKALWQAL 170
            + G E ELR+ RRY  ARRLAGLFA YARQRP+LLVDW DG P    +DL WQ  LW+AL
Sbjct: 121  DTGAEAELRRTRRYEAARRLAGLFAGYARQRPRLLVDWLDGDPGDLDEDLRWQPPLWRAL 180

Query: 171  CERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXX 230
              R+ ADPPH+RHA+T+ +L  +P+DLPQRLSLFGHTRL  T+VE               
Sbjct: 181  LARVAADPPHVRHAETIARLRRAPSDLPQRLSLFGHTRLACTDVELLDALATHHDLHLWL 240

Query: 231  PHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLP-EPDTDEFRGR 289
            PHPSD LW+AL+   G +PRR+DTSHR V HPLLATLGRDLRE+QR LP +P TDE+   
Sbjct: 241  PHPSDRLWRALAGTHGVIPRRDDTSHRAVAHPLLATLGRDLRELQRGLPADPRTDEYLAG 300

Query: 290  SEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADD 349
               PDTLLGWLQSDIAA+AVRP GR     DRS+Q+H+CHGP+RQ+DVLRE+LLGLLADD
Sbjct: 301  DARPDTLLGWLQSDIAANAVRPVGRSLAAGDRSVQIHNCHGPARQVDVLREMLLGLLADD 360

Query: 350  PTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALV 409
            PTL+PRDILVMCPDIE+YAPLI A FGLGDVV           AHPAH+LRVRLADR+L+
Sbjct: 361  PTLQPRDILVMCPDIESYAPLIMADFGLGDVVH---------GAHPAHQLRVRLADRSLI 411

Query: 410  QTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWG 469
            QTNP            GGR  ASEVLNLA++  VRARFGFTDDDLD IT W R+ANIRWG
Sbjct: 412  QTNPLLGVAAQLLALAGGRVRASEVLNLAQTPAVRARFGFTDDDLDTITGWVRQANIRWG 471

Query: 470  FDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFA 529
             D++HRRPY V+F+HNTWRFGIDR+LAGVAMSDDS+AW+  TLPLDDVSSNRV+LAG+ A
Sbjct: 472  LDRQHRRPYHVDFVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQLA 531

Query: 530  DFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALA--DEDWPAAQMQREFAEITARAGD 587
            +FV +L+  +D L+G RPL +WL A+  GI  L      ++W + Q+QREFA ++A+AG 
Sbjct: 532  EFVARLQHVLDSLTGARPLTDWLTAVADGIALLTRVRDADEWQSGQLQREFAAVSAQAGS 591

Query: 588  TA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 646
             A T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FP
Sbjct: 592  RADTVLRLPDVRALLTRHLSGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFP 651

Query: 647  RLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAV 706
            RLG VDGDDALAR PMTGERDIRSEDRQLLLDAI AAT+ LVITYTGANEYSGQ RPPAV
Sbjct: 652  RLGVVDGDDALARCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAV 711

Query: 707  PLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASS 765
            PLAEL+DTL ITT +   D ++ RHPLQPFD RN+IPG LVP  PF+FD T L AA A++
Sbjct: 712  PLAELLDTLDITTAEPVRDRIVVRHPLQPFDIRNIIPGELVPGVPFSFDPTVLRAAHAAT 771

Query: 766  GERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPVD 825
            GE    P F S                  FFKDPV+GFFRAL +TLP DV+GV D MPVD
Sbjct: 772  GEHCEPPKFISAPLPPPPPADVILADLVGFFKDPVQGFFRALQFTLPHDVDGVQDAMPVD 831

Query: 826  IDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEA 885
            IDAL+EWTVGDRML D+LRGMTP  A+QAEWRRGTLPPGQLGWRR   +RDQ A LA EA
Sbjct: 832  IDALQEWTVGDRMLRDMLRGMTPEDARQAEWRRGTLPPGQLGWRRVTEIRDQAARLALEA 891

Query: 886  LGFR-DTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
               R +  G A+DVDIDLG GRRLTGTV+PV+GDRLV+VTYS+L G+HLL+SWIPLLALA
Sbjct: 892  HQHRAEQPGGAHDVDIDLGRGRRLTGTVTPVYGDRLVAVTYSRLDGRHLLESWIPLLALA 951

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGP-DNPVDLLADLVAIYDAGRREPLPLPVKTS 1003
            A    RDW AVCIGR  RGT  RV+ LG P D+PV+LL +LV+IYDAGRREP+PLP+KTS
Sbjct: 952  AHDRGRDWSAVCIGRMRRGTGIRVQRLGSPDDDPVELLRELVSIYDAGRREPIPLPLKTS 1011

Query: 1004 YAWAEARHCGDDPEQKAGFRWRSG-RYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFE 1062
            YAWA AR+ GDDP  +A +RW+S  RYPGED  PAHVRAWGR A L DLM+P+RPGEE +
Sbjct: 1012 YAWAAARYGGDDPVAEARYRWKSSDRYPGEDQAPAHVRAWGRGAPLDDLMRPVRPGEECD 1071

Query: 1063 GETHRLGAYSSRLWLPLLRAER 1084
            GE +RLGAY++RLWLP+LRAER
Sbjct: 1072 GEDNRLGAYAARLWLPMLRAER 1093


>tr|A0QL85|A0QL85_MYCA1 Tax_Id=243243 (recC)SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Mycobacterium avium]
          Length = 1096

 Score = 1420 bits (3675), Expect = 0.0
 Identities = 729/1102 (66%), Positives = 837/1102 (75%), Gaps = 29/1102 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M LHLHRAERT                  FA ELV+VPA+GVERWLSQRLS+ LG     
Sbjct: 1    MPLHLHRAERTDLLADGLGALLANPPADPFALELVVVPARGVERWLSQRLSHVLGRARDG 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              VCA V+FR+P SLIAE+TGTA+DDPWSPDA+ WPLL  ID SLDEPWC TLATHLGHF
Sbjct: 61   DGVCAGVQFRSPGSLIAEITGTAEDDPWSPDALAWPLLEAIDCSLDEPWCRTLATHLGHF 120

Query: 116  EMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DGLP----DDLAWQKALWQAL 170
              G E ELR+ RRY  ARRLAGLFA YARQRP+LLVDW DG P    +DL WQ  LW+AL
Sbjct: 121  HSGAEAELRRTRRYEAARRLAGLFAGYARQRPRLLVDWLDGDPGDLDEDLRWQPPLWRAL 180

Query: 171  CERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXX 230
              R+ ADPPH+RHA+T+ +L  +P+DLPQRLSLFGHTRL  T+VE               
Sbjct: 181  VARVAADPPHVRHAETIARLRRAPSDLPQRLSLFGHTRLACTDVELLDALATHHDLHLWL 240

Query: 231  PHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLP-EPDTDEFRGR 289
            PHPSD LW+AL+   G +PRR+DTSHR V HPLLATLGRDLRE+QR LP +P TDE+   
Sbjct: 241  PHPSDRLWRALAGTNGVIPRRDDTSHRAVAHPLLATLGRDLRELQRGLPADPRTDEYLAG 300

Query: 290  SEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADD 349
               PDTLLGWLQSDIAA+A+RP GR     DRS+Q+H+CHGP+RQ+DVLREVLLGLLADD
Sbjct: 301  DARPDTLLGWLQSDIAANAIRPVGRSLAAGDRSVQIHNCHGPARQVDVLREVLLGLLADD 360

Query: 350  PTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALV 409
            PTL+PRDILVMCPDIE+YAPLI A FGLGDVV           AHPAH+LRVRLADR+L+
Sbjct: 361  PTLQPRDILVMCPDIESYAPLIMADFGLGDVVH---------GAHPAHQLRVRLADRSLI 411

Query: 410  QTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWG 469
            QTNP            GGR  ASEVLNLA++  VRARFGFTDDDL+AIT W R+ANIRWG
Sbjct: 412  QTNPLLGVAAQLLALAGGRVRASEVLNLAQTPAVRARFGFTDDDLEAITGWVRQANIRWG 471

Query: 470  FDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFA 529
             D++HRRPY V+F+HNTWRFGIDR+LAGVAMSDDS+AW+  TLPLDDVSSNRV+LAG+ A
Sbjct: 472  LDRQHRRPYHVDFVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQLA 531

Query: 530  DFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALA--DEDWPAAQMQREFAEITARAGD 587
            +FV +L+  +D L+G RPL EWL A+  GI  L      ++W + Q+QREFA ++A+AG 
Sbjct: 532  EFVARLQHVLDSLTGARPLTEWLTAVADGIALLTRVRDADEWQSGQLQREFAAVSAQAGS 591

Query: 588  TA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 646
             A T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG+FP
Sbjct: 592  RADTVLRLPDVRALLTRHLSGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFP 651

Query: 647  RLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAV 706
            RLG VDGDDAL+R PMTGERDIRSEDRQLLLDAI AAT+ LVITYTGANEYSGQ RPPAV
Sbjct: 652  RLGVVDGDDALSRCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAV 711

Query: 707  PLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASS 765
            PLAEL+DTL ITT +   D ++ RHPLQPFD RNVIP  LVP  PF+FD T L AARA++
Sbjct: 712  PLAELLDTLDITTAEPVRDRIVVRHPLQPFDIRNVIPDELVPGVPFSFDPTVLRAARAAT 771

Query: 766  GERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPVD 825
            GE    P F S                  FFKDPV+GFFRAL +TLP DV+GV D MPVD
Sbjct: 772  GEHCEPPKFISAPLPPPPPADVILADLVGFFKDPVQGFFRALQFTLPHDVDGVQDAMPVD 831

Query: 826  IDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEA 885
            IDAL+EWTVGDRML D+LRGMTP  A+QAEWRRGTLPPGQLGWRR   +RDQ A LA EA
Sbjct: 832  IDALQEWTVGDRMLRDMLRGMTPEDARQAEWRRGTLPPGQLGWRRVTEIRDQAARLAREA 891

Query: 886  LGFR-DTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
               R +  G A+DVDIDLG GRRLTGTV+PV+G+RLV+VTYS+L G+HLL+SWIPLLALA
Sbjct: 892  HQHRAEQPGGAHDVDIDLGRGRRLTGTVTPVYGNRLVAVTYSRLDGRHLLESWIPLLALA 951

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGP-DNPVDLLADLVAIYDAGRREPLPLPVKTS 1003
            A    RDW AVCIGR  RGT  RV+ LG P D+PV+LL +LV+IYDAGRREP+PLP+KTS
Sbjct: 952  AHDRGRDWSAVCIGRMRRGTGIRVQRLGSPDDDPVELLHELVSIYDAGRREPIPLPLKTS 1011

Query: 1004 YAWAEARHCGDDPEQKAGFRWRSG-RYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFE 1062
            YAWA AR+ GDDP  +A +RW+S  RYPGED  PAHVRAWGR A L DLMQP+RPGEE +
Sbjct: 1012 YAWAAARYGGDDPVAEARYRWKSSDRYPGEDQAPAHVRAWGRGAPLDDLMQPVRPGEECD 1071

Query: 1063 GETHRLGAYSSRLWLPLLRAER 1084
            GE +RLGAY++RLWLP+LRAER
Sbjct: 1072 GEDNRLGAYAARLWLPMLRAER 1093


>tr|B2HSF7|B2HSF7_MYCMM Tax_Id=216594 (recC)SubName:
            Full=Exodeoxyribonuclease V (Gamma chain),
            RecC;[Mycobacterium marinum]
          Length = 1099

 Score = 1416 bits (3665), Expect = 0.0
 Identities = 736/1106 (66%), Positives = 822/1106 (74%), Gaps = 34/1106 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M LHLHRAERT                  FA ELVLVPA+GVERWLSQRLS+ LG     
Sbjct: 1    MPLHLHRAERTDLLADGLGALLAQPLADPFAEELVLVPARGVERWLSQRLSHLLGHAPGG 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA V FRNPRSLIAE+TGTA DDPWS +AM WPLL VID SL++PWCATLA HLGH
Sbjct: 61   GDGVCAGVSFRNPRSLIAEITGTAADDPWSAEAMTWPLLEVIDGSLEQPWCATLARHLGH 120

Query: 115  FEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQA 169
            F++G E ELR+GRRY+VARRLAGLFASYARQRP++L DW DG    L  DL+WQ  LW A
Sbjct: 121  FDVGPEAELRRGRRYSVARRLAGLFASYARQRPRVLSDWLDGGRGDLDPDLSWQPELWCA 180

Query: 170  LCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXX 229
            L   + ADPPH+RH KTL  L   P  LP RLSLFGHTR+  T++E              
Sbjct: 181  LVAVVGADPPHLRHEKTLTALRARPAGLPPRLSLFGHTRMAVTDIELLGAVATHHELHLW 240

Query: 230  XPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLP-EPDTDEFRG 288
             PHPS  LW++L+   G +PRR D SHR V HPLLATLGRDLRE+QR LP +P TDE  G
Sbjct: 241  LPHPSAALWRSLADLHGVVPRRADASHRRVVHPLLATLGRDLRELQRGLPADPATDEALG 300

Query: 289  RSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLAD 348
             +  PDTLLGWLQSD+AA+ VRP+ R     DRSIQVHSCHGP+RQIDVLREVLLGLLAD
Sbjct: 301  ATTRPDTLLGWLQSDLAANQVRPENRTLVAGDRSIQVHSCHGPARQIDVLREVLLGLLAD 360

Query: 349  DPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRAL 408
            DPTLEPRDILVMCPDIETYAPLI A FGLGDV+            HPAH+LRVRLADR+L
Sbjct: 361  DPTLEPRDILVMCPDIETYAPLIVADFGLGDVMH---------GVHPAHRLRVRLADRSL 411

Query: 409  VQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRW 468
            +QTNP            G R TASEVLNLA++APVRARFGF DD L+ IT W R++NIRW
Sbjct: 412  LQTNPLLGVASQLLMLAGSRVTASEVLNLAQAAPVRARFGFADDHLEDITRWVRQSNIRW 471

Query: 469  GFDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRF 528
            GFDQEHR+PYGV+F+HNTWRFGIDRVLAGVAMS+ SHAW+  TLPLDDV SNRVELAGRF
Sbjct: 472  GFDQEHRKPYGVDFVHNTWRFGIDRVLAGVAMSEASHAWIDATLPLDDVGSNRVELAGRF 531

Query: 529  ADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADED--WPAAQMQREFAEITARAG 586
            A+++++LR+ VD L+GTRPL EWL ALT GI  L   DE   W + QMQREFAE++  AG
Sbjct: 532  AEYIDRLRQVVDSLTGTRPLREWLAALTDGIALLTRVDEGDAWQSDQMQREFAEVSRTAG 591

Query: 587  D-TATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF 645
                T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF
Sbjct: 592  RWVETMLRLPDIRALLQRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF 651

Query: 646  PRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPA 705
            PR G VDGDD LAR PMTGERDIRSEDRQLLLDAI AAT+ LVITYTGANEYSGQ +PPA
Sbjct: 652  PRQGVVDGDDVLARSPMTGERDIRSEDRQLLLDAIGAATENLVITYTGANEYSGQRKPPA 711

Query: 706  VPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARAS 764
            VPLAEL+DTL +TT +     V+  HPLQPFD RNV  GAL+P  PF+FD T L AARA+
Sbjct: 712  VPLAELLDTLDMTTTEQVRGRVVVEHPLQPFDVRNVTCGALMPGVPFSFDPTVLRAARAA 771

Query: 765  SGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPV 824
            +GERA +P F                    FFKDPVKGFFRALDYTLPWDV+GV D MPV
Sbjct: 772  AGERAQQPRFIGAPLAPPPADDVALADLVAFFKDPVKGFFRALDYTLPWDVDGVEDAMPV 831

Query: 825  DIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAE 884
            DI+ALEEWTVGDRML+DIL GM P  A+QAEWRRGTLPPGQLGWR+   +RDQ ALLAA 
Sbjct: 832  DINALEEWTVGDRMLADILSGMAPDEARQAEWRRGTLPPGQLGWRKVTEIRDQAALLAAA 891

Query: 885  ALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
            AL  R  D  AYDVDIDL G RRLTGTV+ VFGDRLVSVTYSKL GKHLL+SWIPLLAL 
Sbjct: 892  ALRHRRADAAAYDVDIDL-GSRRLTGTVAQVFGDRLVSVTYSKLDGKHLLESWIPLLALF 950

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGP-DNPVDLLADLVAIYDAGRREPLPLPVKTS 1003
            A     DW AVCIGR  RGT PR  GLG P + PV+LL DLVAIYDAGRREP+PLP+KTS
Sbjct: 951  AHAGAHDWSAVCIGRQKRGTVPRQAGLGRPREQPVELLRDLVAIYDAGRREPIPLPIKTS 1010

Query: 1004 YAWAEARHCGDDPEQKAGFRWRSG-RYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEF- 1061
            YAW  ARHCGDDP ++A FRW+S  RYP ED  PAHVR WGR+A L DLMQP+R   E  
Sbjct: 1011 YAWGAARHCGDDPVREASFRWKSSDRYPAEDQAPAHVRTWGRNARLTDLMQPVRAESERA 1070

Query: 1062 ---EGETHRLGAYSSRLWLPLLRAER 1084
                GE +RLGA+++RLWLP+LRAER
Sbjct: 1071 ACPNGEDNRLGAFAARLWLPMLRAER 1096


>tr|A0PLZ4|A0PLZ4_MYCUA Tax_Id=362242 (recC)SubName:
            Full=Exodeoxyribonuclease V (Gamma chain),
            RecC;[Mycobacterium ulcerans]
          Length = 1099

 Score = 1409 bits (3647), Expect = 0.0
 Identities = 733/1106 (66%), Positives = 819/1106 (74%), Gaps = 34/1106 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M  HLHRAERT                  FA ELVLVPA+GVERWLSQRLS+ LG     
Sbjct: 1    MPFHLHRAERTDLLADGLGALLAQPLADPFAEELVLVPARGVERWLSQRLSHLLGHAPGG 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA V FRNPRSLIAE+TGTA DDPWS +AM WPLL VID SL+EPWCATLA HLGH
Sbjct: 61   GDGVCAGVSFRNPRSLIAEITGTAADDPWSAEAMTWPLLEVIDGSLEEPWCATLARHLGH 120

Query: 115  FEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQA 169
            F++G E ELR+GRRY+VARRLAGLFASYARQRP++L DW DG    L  DL+WQ  LW A
Sbjct: 121  FDVGPEAELRRGRRYSVARRLAGLFASYARQRPRVLSDWLDGGRGDLDPDLSWQPELWCA 180

Query: 170  LCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXX 229
            L   + ADPPH+RH KTL  L   P  LP RLSLFGHTR+  T++E              
Sbjct: 181  LVAVVGADPPHLRHEKTLTALRARPAGLPPRLSLFGHTRMAVTDIELLGALATHHELHLW 240

Query: 230  XPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLP-EPDTDEFRG 288
             PHPS  LW++L+   G +PRR D SHR V HPLLATLGRDLRE+QR LP +P TDE  G
Sbjct: 241  LPHPSAALWRSLADLHGVVPRRADASHRRVVHPLLATLGRDLRELQRGLPADPATDEALG 300

Query: 289  RSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLAD 348
             +  PDTLLGWLQSD+AA+ VRP+ R     DRSIQVHSCHGP+RQIDVLREVLLGLLAD
Sbjct: 301  ATTRPDTLLGWLQSDLAANQVRPENRTLVAGDRSIQVHSCHGPARQIDVLREVLLGLLAD 360

Query: 349  DPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRAL 408
            DPTLEPRDILVMCPDIETYAPLI A FGLGDV+            HPAH+LRVRLADR+L
Sbjct: 361  DPTLEPRDILVMCPDIETYAPLIVADFGLGDVMH---------GVHPAHRLRVRLADRSL 411

Query: 409  VQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRW 468
            +QTNP            G R TASEVLNLA++APVRARFGF DD L+ IT W R++NIRW
Sbjct: 412  LQTNPLLGVASQLLMLAGSRVTASEVLNLAQAAPVRARFGFADDHLEDITRWVRQSNIRW 471

Query: 469  GFDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRF 528
            GFDQEHR+PYGV+F+HNTWRFGIDRVLAGVAMS+ SHAW+  TLPLDDV SNRVELAGRF
Sbjct: 472  GFDQEHRKPYGVDFVHNTWRFGIDRVLAGVAMSEASHAWIDATLPLDDVGSNRVELAGRF 531

Query: 529  ADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADED--WPAAQMQREFAEITARAG 586
            A+++++LR+ VD L+GTRPL EWL ALT GI  L   DE   W + QM+REFAE++  AG
Sbjct: 532  AEYIDRLRQVVDSLTGTRPLREWLAALTDGIALLTRVDEGEAWQSDQMRREFAEVSRTAG 591

Query: 587  D-TATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF 645
                T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF
Sbjct: 592  RWVETMLRVPDIRALLQRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVF 651

Query: 646  PRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPA 705
            PR G VDGDD LAR PMTGERDIRSEDRQLLLDAI AAT+ LVITYTGANEYSGQ +PPA
Sbjct: 652  PRQGVVDGDDVLARSPMTGERDIRSEDRQLLLDAIGAATENLVITYTGANEYSGQRKPPA 711

Query: 706  VPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARAS 764
            VPLAEL+ TL +TT +     V+  HPLQPFD RNV  GAL+P  PF+FD T L AARA+
Sbjct: 712  VPLAELLGTLDMTTTEQVRGRVVVEHPLQPFDVRNVTRGALMPGVPFSFDPTVLRAARAA 771

Query: 765  SGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPV 824
            +GERA +P F                    FFKDPVKGFFRALDYTLPWDV+GV D MPV
Sbjct: 772  AGERAQQPRFIGAPLAPPPADDVALADLVAFFKDPVKGFFRALDYTLPWDVDGVEDAMPV 831

Query: 825  DIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAE 884
            DI+ALEEWTVGDRML+DIL GM P  A+QAEWRRGTLPPGQLGWR+   +RDQ ALLAA 
Sbjct: 832  DINALEEWTVGDRMLADILSGMAPDEARQAEWRRGTLPPGQLGWRKVTEIRDQAALLAAA 891

Query: 885  ALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
            A+  R  D  AYDVDIDL G RRLTGTV+ VFGDRLVSVTYSKL GKHLL+SWIPLLAL 
Sbjct: 892  AMRHRRDDAAAYDVDIDL-GSRRLTGTVAQVFGDRLVSVTYSKLDGKHLLESWIPLLALF 950

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGP-DNPVDLLADLVAIYDAGRREPLPLPVKTS 1003
            A     DW AVCIGR  RGT PR  GLG P   PV+LL DLVAIYDAGRREP+PLP+KTS
Sbjct: 951  AHAGAHDWSAVCIGRQKRGTVPRQAGLGRPRGQPVELLRDLVAIYDAGRREPIPLPIKTS 1010

Query: 1004 YAWAEARHCGDDPEQKAGFRWRSG-RYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEF- 1061
            YAWA ARHCGDDP ++A FRW+S  RYP ED  PAHVR WGR+A L DLMQP+    E  
Sbjct: 1011 YAWAAARHCGDDPVREASFRWKSSDRYPAEDQAPAHVRTWGRNARLTDLMQPVHAESERA 1070

Query: 1062 ---EGETHRLGAYSSRLWLPLLRAER 1084
                GE +RLGA+++RLWLP+LRAER
Sbjct: 1071 ACPNGEDNRLGAFAARLWLPMLRAER 1096


>tr|A3PUY9|A3PUY9_MYCSJ Tax_Id=164757 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Mycobacterium sp.]
          Length = 1080

 Score = 1408 bits (3645), Expect = 0.0
 Identities = 718/1100 (65%), Positives = 812/1100 (73%), Gaps = 39/1100 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M  HLHRAERT                  FA ELVLVPAKGVERWLSQRLS+ LG     
Sbjct: 1    MPFHLHRAERTDLLADGLGALLSTPLADPFAEELVLVPAKGVERWLSQRLSHVLGRGSGD 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              VCA + FRNPRSLIA++TGT DDDPW+PD++VWPLL VID++LD+PWC TLATHLGHF
Sbjct: 61   DGVCAGITFRNPRSLIADITGTRDDDPWAPDSLVWPLLEVIDDNLDQPWCTTLATHLGHF 120

Query: 116  EMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-----DGLPDDLAWQKALWQAL 170
            E GEE ELRQ RRYAVARRLAGLFASYARQRP LLVDW       L DDL WQ  LW+ L
Sbjct: 121  EHGEEQELRQSRRYAVARRLAGLFASYARQRPGLLVDWLAGDPADLDDDLHWQPHLWRHL 180

Query: 171  CERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXX 230
             +R+ ADPPHIRHAKT+ +LHESP+DLP+RLSLFGHTRLP+TEVE               
Sbjct: 181  VDRVPADPPHIRHAKTVARLHESPSDLPERLSLFGHTRLPSTEVELLDALATHHDLHLWL 240

Query: 231  PHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEP-DTDEFRGR 289
            PHPSD LW  L   +G + RRED +HR+VGHPLLATLGRDLRE+QR LP+   TDE+ G 
Sbjct: 241  PHPSDDLWTTLEPHRGAVRRREDNTHREVGHPLLATLGRDLRELQRSLPDDAQTDEYLGT 300

Query: 290  SEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADD 349
            +++PDTLLGWLQSDIAA+AVRP GR     DRS+QVHSCHG +RQIDVLREVLLGLL DD
Sbjct: 301  ADHPDTLLGWLQSDIAANAVRPDGRRLHDHDRSVQVHSCHGAARQIDVLREVLLGLLVDD 360

Query: 350  PTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALV 409
            PTLEPRDILVMCPDIE YAPLI AGFGLGDV+           AHPAH+LRV+LADRAL 
Sbjct: 361  PTLEPRDILVMCPDIEHYAPLIVAGFGLGDVIH---------GAHPAHRLRVKLADRALT 411

Query: 410  QTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWG 469
            QTNP            GGRATA+EVLNLAE+  +RARF F+DDDLDAI  W REANIRWG
Sbjct: 412  QTNPLLGVAAQLLALAGGRATATEVLNLAEAPSIRARFTFSDDDLDAIGDWVREANIRWG 471

Query: 470  FDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFA 529
            FD+EHR PYGV+F+ NTWRFG+DRVLAGVAMSDDSHAWL TTLPLDDV S+RVELAGR A
Sbjct: 472  FDREHRHPYGVDFVQNTWRFGLDRVLAGVAMSDDSHAWLDTTLPLDDVGSDRVELAGRLA 531

Query: 530  DFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADED--WPAAQMQREFAEITARAGD 587
            ++V++L+  V+ LSGTRPLHEWLDAL  GID L    +D  W  +Q++REFA++  +AG 
Sbjct: 532  EYVDRLQHCVENLSGTRPLHEWLDALRTGIDQLTSVPDDDTWQTSQLEREFADVLTQAGP 591

Query: 588  TA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 646
               T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG FP
Sbjct: 592  RKDTLLRLPDVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGAFP 651

Query: 647  RLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAV 706
            RLG VDGDDALARDPMTGERDIRSEDRQLLLDAI AAT+ LV+TYTGANEYSGQ +PPAV
Sbjct: 652  RLGVVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATERLVVTYTGANEYSGQRKPPAV 711

Query: 707  PLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGAL-VPDEPFTFDQTALVAARAS 764
            PL EL+D L +TTE    + +L  HPLQPFD RNV PGAL VP  PFTFD TAL AA  +
Sbjct: 712  PLVELLDALDVTTEAPVREQILVEHPLQPFDVRNVTPGALGVPGTPFTFDSTALTAATVA 771

Query: 765  SGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPV 824
            SG+RA RP   +                  FFKDPV+GFFRALD+TLPWDV+ V D MPV
Sbjct: 772  SGDRAERPGLLTHPLPAPPEDDVALDDLIGFFKDPVRGFFRALDFTLPWDVDAVEDAMPV 831

Query: 825  DIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAE 884
            +IDAL EW VG+RML D+LRG+ P  AQQAEWRRG+LPPG+LGWR+A  LRDQ A LA  
Sbjct: 832  EIDALAEWQVGERMLDDMLRGLNPEQAQQAEWRRGSLPPGRLGWRKAQELRDQAAALATA 891

Query: 885  ALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
            A   R    +AYDVDI LGGGRR+TGTV  V+GDR V+VTYSKL G+HLL SWI L AL+
Sbjct: 892  AHRHRRQPPRAYDVDIHLGGGRRVTGTVPKVYGDRTVTVTYSKLDGRHLLASWIQLAALS 951

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSY 1004
            A  P  DW AVCIGRP RGTTPR   LG P +   +L DLV +YDAGRREP+PLP KTSY
Sbjct: 952  AQMPGTDWAAVCIGRPKRGTTPRERMLGAPGDAAGVLQDLVNMYDAGRREPIPLPPKTSY 1011

Query: 1005 AWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGE 1064
            AWAEARH   D E++A +RW+S RYPGEDAEPA+VR WG  A L  L+     G      
Sbjct: 1012 AWAEARHSRGDAEREARYRWKSDRYPGEDAEPANVRVWGAHAPLDTLLAAGMDG------ 1065

Query: 1065 THRLGAYSSRLWLPLLRAER 1084
                  Y+ RLWLP+L AER
Sbjct: 1066 ------YAGRLWLPMLEAER 1079


>tr|Q1BDL7|Q1BDL7_MYCSS Tax_Id=164756 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Mycobacterium sp.]
          Length = 1082

 Score = 1399 bits (3620), Expect = 0.0
 Identities = 714/1100 (64%), Positives = 811/1100 (73%), Gaps = 39/1100 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M  HLHRAERT                  FA ELVLVPAKGVERWLSQRLS+ LG     
Sbjct: 1    MPFHLHRAERTDLLADGLGALLSTPLADPFAEELVLVPAKGVERWLSQRLSHVLGRGSGD 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              VCA + FRNPRSLIA++TGT DDDPW+PD++VWPLL VID++LD+PWC TLATHLGHF
Sbjct: 61   DGVCAGITFRNPRSLIADITGTRDDDPWAPDSLVWPLLEVIDDNLDQPWCTTLATHLGHF 120

Query: 116  EMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-----DGLPDDLAWQKALWQAL 170
            E G+E ELRQ RRYAVARRLAGLFASYARQRP LLVDW       L DDL WQ  LW+ L
Sbjct: 121  EHGQEQELRQSRRYAVARRLAGLFASYARQRPGLLVDWLAGNPADLDDDLHWQPHLWRHL 180

Query: 171  CERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXX 230
             ER+ ADPPHIRHAKT+ +LHESP++LP+R+SLFGHTRLP+TEVE               
Sbjct: 181  VERVPADPPHIRHAKTVARLHESPSNLPERMSLFGHTRLPSTEVELLDALATHHDLHLWL 240

Query: 231  PHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TDEFRGR 289
            PHPSD LW  L   +G + RRED +HR+VGHPLLATLGRDLRE+QR LP+   TDE+ G 
Sbjct: 241  PHPSDDLWTTLEPHRGAVRRREDNTHREVGHPLLATLGRDLRELQRSLPDDSQTDEYLGT 300

Query: 290  SEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADD 349
            +++PDTLLGWLQSDIAA+AVRP GR     DRS+QVHSCHG +RQIDVLREVLLGLL DD
Sbjct: 301  ADHPDTLLGWLQSDIAANAVRPDGRRLHDHDRSVQVHSCHGAARQIDVLREVLLGLLVDD 360

Query: 350  PTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALV 409
            PTLEPRDILVMCPDIE YA LI AGFGLGDV+           AHPAH+LRV+LADRAL 
Sbjct: 361  PTLEPRDILVMCPDIEHYAALIVAGFGLGDVIH---------GAHPAHRLRVKLADRALT 411

Query: 410  QTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWG 469
            QTNP            GGRATA+EVLNLAE+  +RARF F+DDDLDAI  W REANIRWG
Sbjct: 412  QTNPLLGVAGQLLALAGGRATATEVLNLAEAPSIRARFTFSDDDLDAIGDWVREANIRWG 471

Query: 470  FDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFA 529
            FD+EHR PYGV+F+ NTWRFG+DRVLAGVAMSDDSHAWL TTLPLDDV S+RVELAGR A
Sbjct: 472  FDREHRHPYGVDFVQNTWRFGLDRVLAGVAMSDDSHAWLDTTLPLDDVGSDRVELAGRLA 531

Query: 530  DFVEKLRRTVDQLSGTRPLHEWLDALTAGIDAL-ALADED-WPAAQMQREFAEITARAGD 587
            ++V++L+  V+ LSGT+PLHEWL+AL  GID L A+ D+D W  +Q++REFA++  +AG 
Sbjct: 532  EYVDRLQHCVENLSGTKPLHEWLEALRTGIDQLTAVPDDDTWQTSQLEREFADVLTQAGS 591

Query: 588  TA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 646
               T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG FP
Sbjct: 592  RKDTLLRLPDVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGAFP 651

Query: 647  RLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAV 706
            RLG VDGDDALARDPMTGERDIRSEDRQLLLDAI AAT+ LV+TYTGANEYSGQ +PPAV
Sbjct: 652  RLGVVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATERLVVTYTGANEYSGQRKPPAV 711

Query: 707  PLAELIDTLKITTEDSAL-DVLTRHPLQPFDKRNVIPGAL-VPDEPFTFDQTALVAARAS 764
            PL EL+D L +TTE      +L  HPLQPFD RNV PGAL VP  PFTFD TAL AA  +
Sbjct: 712  PLVELLDALDVTTEAPVRKQILVEHPLQPFDVRNVTPGALGVPGTPFTFDSTALTAATVA 771

Query: 765  SGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPV 824
            SG+RA RP   +                  FFKDPVKGFFRALD+TLPWDV+ V D MPV
Sbjct: 772  SGDRAERPGLLTHPLPAPPEDDVALDDLIGFFKDPVKGFFRALDFTLPWDVDAVQDAMPV 831

Query: 825  DIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAE 884
            +IDAL EW VG+RML D+LRG+ P  AQQAEWRRG+LPPG+LGWR+A  LRDQ A LA  
Sbjct: 832  EIDALAEWQVGERMLDDMLRGLNPEQAQQAEWRRGSLPPGRLGWRKAQELRDQAAALATA 891

Query: 885  ALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
            A   R    +AYDVDI LGGGRR+TGTV  V+GDR V+VTYSKL G+HLL SWI L AL 
Sbjct: 892  AHRHRRQPARAYDVDIHLGGGRRVTGTVPKVYGDRTVTVTYSKLDGRHLLASWIQLAALT 951

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSY 1004
            A  P  DW AVCIGRP RG TPR   LG P +   +L DLV +YDAGRREP+PLP KTSY
Sbjct: 952  AQLPGTDWAAVCIGRPKRGATPRERMLGAPGDATGVLRDLVNMYDAGRREPIPLPPKTSY 1011

Query: 1005 AWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGE 1064
            AWAEARH   D E+++ +RW+S RYPGEDAEPA+VR WG  A L  L+     G      
Sbjct: 1012 AWAEARHSRGDAERESRYRWKSDRYPGEDAEPANVRVWGAHAPLDTLLAAGMDG------ 1065

Query: 1065 THRLGAYSSRLWLPLLRAER 1084
                  Y+ RLWLP+L AER
Sbjct: 1066 ------YAGRLWLPMLEAER 1079


>tr|A1UBC4|A1UBC4_MYCSK Tax_Id=189918 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Mycobacterium sp.]
          Length = 1082

 Score = 1399 bits (3620), Expect = 0.0
 Identities = 714/1100 (64%), Positives = 811/1100 (73%), Gaps = 39/1100 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M  HLHRAERT                  FA ELVLVPAKGVERWLSQRLS+ LG     
Sbjct: 1    MPFHLHRAERTDLLADGLGALLSTPLADPFAEELVLVPAKGVERWLSQRLSHVLGRGSGD 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              VCA + FRNPRSLIA++TGT DDDPW+PD++VWPLL VID++LD+PWC TLATHLGHF
Sbjct: 61   DGVCAGITFRNPRSLIADITGTRDDDPWAPDSLVWPLLEVIDDNLDQPWCTTLATHLGHF 120

Query: 116  EMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-----DGLPDDLAWQKALWQAL 170
            E G+E ELRQ RRYAVARRLAGLFASYARQRP LLVDW       L DDL WQ  LW+ L
Sbjct: 121  EHGQEQELRQSRRYAVARRLAGLFASYARQRPGLLVDWLAGNPADLDDDLHWQPHLWRHL 180

Query: 171  CERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXX 230
             ER+ ADPPHIRHAKT+ +LHESP++LP+R+SLFGHTRLP+TEVE               
Sbjct: 181  VERVPADPPHIRHAKTVARLHESPSNLPERMSLFGHTRLPSTEVELLDALATHHDLHLWL 240

Query: 231  PHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TDEFRGR 289
            PHPSD LW  L   +G + RRED +HR+VGHPLLATLGRDLRE+QR LP+   TDE+ G 
Sbjct: 241  PHPSDDLWTTLEPHRGAVRRREDNTHREVGHPLLATLGRDLRELQRSLPDDSQTDEYLGT 300

Query: 290  SEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADD 349
            +++PDTLLGWLQSDIAA+AVRP GR     DRS+QVHSCHG +RQIDVLREVLLGLL DD
Sbjct: 301  ADHPDTLLGWLQSDIAANAVRPDGRRLHDHDRSVQVHSCHGAARQIDVLREVLLGLLVDD 360

Query: 350  PTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALV 409
            PTLEPRDILVMCPDIE YA LI AGFGLGDV+           AHPAH+LRV+LADRAL 
Sbjct: 361  PTLEPRDILVMCPDIEHYAALIVAGFGLGDVIH---------GAHPAHRLRVKLADRALT 411

Query: 410  QTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWG 469
            QTNP            GGRATA+EVLNLAE+  +RARF F+DDDLDAI  W REANIRWG
Sbjct: 412  QTNPLLGVAGQLLALAGGRATATEVLNLAEAPSIRARFTFSDDDLDAIGDWVREANIRWG 471

Query: 470  FDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFA 529
            FD+EHR PYGV+F+ NTWRFG+DRVLAGVAMSDDSHAWL TTLPLDDV S+RVELAGR A
Sbjct: 472  FDREHRHPYGVDFVQNTWRFGLDRVLAGVAMSDDSHAWLDTTLPLDDVGSDRVELAGRLA 531

Query: 530  DFVEKLRRTVDQLSGTRPLHEWLDALTAGIDAL-ALADED-WPAAQMQREFAEITARAGD 587
            ++V++L+  V+ LSGT+PLHEWL+AL  GID L A+ D+D W  +Q++REFA++  +AG 
Sbjct: 532  EYVDRLQHCVENLSGTKPLHEWLEALRTGIDQLTAVPDDDTWQTSQLEREFADVLTQAGS 591

Query: 588  TA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 646
               T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDG FP
Sbjct: 592  RKDTLLRLPDVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGAFP 651

Query: 647  RLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAV 706
            RLG VDGDDALARDPMTGERDIRSEDRQLLLDAI AAT+ LV+TYTGANEYSGQ +PPAV
Sbjct: 652  RLGVVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATERLVVTYTGANEYSGQRKPPAV 711

Query: 707  PLAELIDTLKITTEDSAL-DVLTRHPLQPFDKRNVIPGAL-VPDEPFTFDQTALVAARAS 764
            PL EL+D L +TTE      +L  HPLQPFD RNV PGAL VP  PFTFD TAL AA  +
Sbjct: 712  PLVELLDALDVTTEAPVRKQILVEHPLQPFDVRNVTPGALGVPGTPFTFDSTALTAATVA 771

Query: 765  SGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMPV 824
            SG+RA RP   +                  FFKDPVKGFFRALD+TLPWDV+ V D MPV
Sbjct: 772  SGDRAERPGLLTHPLPAPPEDDVALDDLIGFFKDPVKGFFRALDFTLPWDVDAVQDAMPV 831

Query: 825  DIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAE 884
            +IDAL EW VG+RML D+LRG+ P  AQQAEWRRG+LPPG+LGWR+A  LRDQ A LA  
Sbjct: 832  EIDALAEWQVGERMLDDMLRGLNPEQAQQAEWRRGSLPPGRLGWRKAQELRDQAAALATA 891

Query: 885  ALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALA 944
            A   R    +AYDVDI LGGGRR+TGTV  V+GDR V+VTYSKL G+HLL SWI L AL 
Sbjct: 892  AHRHRRQPARAYDVDIHLGGGRRVTGTVPKVYGDRTVTVTYSKLDGRHLLASWIQLAALT 951

Query: 945  AGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSY 1004
            A  P  DW AVCIGRP RG TPR   LG P +   +L DLV +YDAGRREP+PLP KTSY
Sbjct: 952  AQLPGTDWAAVCIGRPKRGATPRERMLGAPGDATGVLRDLVNMYDAGRREPIPLPPKTSY 1011

Query: 1005 AWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGE 1064
            AWAEARH   D E+++ +RW+S RYPGEDAEPA+VR WG  A L  L+     G      
Sbjct: 1012 AWAEARHSRGDAERESRYRWKSDRYPGEDAEPANVRVWGAHAPLDTLLAAGMDG------ 1065

Query: 1065 THRLGAYSSRLWLPLLRAER 1084
                  Y+ RLWLP+L AER
Sbjct: 1066 ------YAGRLWLPMLEAER 1079


>tr|A1T4E5|A1T4E5_MYCVP Tax_Id=350058 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Mycobacterium vanbaalenii]
          Length = 1084

 Score = 1339 bits (3465), Expect = 0.0
 Identities = 703/1102 (63%), Positives = 796/1102 (72%), Gaps = 41/1102 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRA+RT                  FA +LVLV A+G ERWLSQRLS+ LG     
Sbjct: 1    MALHLHRADRTDLLADGLGAMLADPPADPFAEDLVLVSARGTERWLSQRLSHILGRGSGQ 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              +CA V FR+PRSL+AELTGT +DDPWSPDAMVWPLL VID  + EPWCATLATHLGHF
Sbjct: 61   DGICAGVTFRHPRSLMAELTGTDEDDPWSPDAMVWPLLDVIDGCITEPWCATLATHLGHF 120

Query: 116  EMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQAL 170
              GEE  LRQGRRYAVARRLAGLF SYARQRPQLL+DW DG    L +DL WQ  L++AL
Sbjct: 121  ADGEEKVLRQGRRYAVARRLAGLFDSYARQRPQLLIDWIDGRTGALDEDLRWQPELYRAL 180

Query: 171  CERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXX 230
               +D +PPHIRHA+T+ +L ESP++LPQRLS+FGHTRLPATE+E               
Sbjct: 181  LAHVDTEPPHIRHAETVARLRESPSELPQRLSMFGHTRLPATEIELLAALSTHHDLHLWL 240

Query: 231  PHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLP-EPDTDEFRGR 289
            PHPSD LW +L    G  PRR DTSHRDV HPLLATLGRDLRE+QR+LP +  TDE  G 
Sbjct: 241  PHPSDKLWTSLRGVHGAAPRRTDTSHRDVDHPLLATLGRDLRELQRVLPADAQTDESLGP 300

Query: 290  SEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADD 349
            ++ PDTLLGWLQSD+ ADAVRPQGR     DRS+QVHSCHG +RQIDVLREVLLGLLADD
Sbjct: 301  ADRPDTLLGWLQSDLGADAVRPQGRSCAPGDRSVQVHSCHGAARQIDVLREVLLGLLADD 360

Query: 350  PTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALV 409
            PTLEPRDILVMCPDIETYAPLI AGFGLGDVV           AHPAH+LRV LADRAL 
Sbjct: 361  PTLEPRDILVMCPDIETYAPLIVAGFGLGDVVS---------GAHPAHRLRVTLADRALT 411

Query: 410  QTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWG 469
            QTNP            GGRATASEVLNLAE+APVR RFGFTDDDLDAI  W REANIRWG
Sbjct: 412  QTNPLLGVARQLLGLAGGRATASEVLNLAEAAPVRLRFGFTDDDLDAIGDWVREANIRWG 471

Query: 470  FDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFA 529
            FD+ HR PYGV+F+ NTWRFGIDRVLAGVAMSDDSHAWL TTLPLDDVSSNRVELAGR A
Sbjct: 472  FDRGHRHPYGVDFVQNTWRFGIDRVLAGVAMSDDSHAWLDTTLPLDDVSSNRVELAGRLA 531

Query: 530  DFVEKLRRTVDQLSGTRPLHEWLDALTAGIDAL-ALADED-WPAAQMQREFAEITARAGD 587
            ++V++LR  V+ LSG   L++WL  L+ G+DAL A++D D W  +Q+ RE A+I A AG 
Sbjct: 532  EYVDRLRSVVESLSGAAALNDWLARLSEGLDALTAVSDADLWQTSQVGRELADILAAAGA 591

Query: 588  TA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 646
             A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP
Sbjct: 592  HADVELRLSDIRALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 651

Query: 647  RLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAV 706
            R G VDGDD LARDPMTGERDIRSEDRQLLLDAI AAT+ LVITYTGANEYSGQ +PPAV
Sbjct: 652  RSGVVDGDDVLARDPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQRKPPAV 711

Query: 707  PLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGAL--VPDEPFTFDQTALVAARA 763
            P+ EL+DTL +TT     + VL  HPLQPFD  NV PG L      PFTFD TAL AA A
Sbjct: 712  PVMELLDTLDVTTSAPVRETVLVEHPLQPFDVDNVTPGKLGMPAGRPFTFDPTALTAATA 771

Query: 764  SSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMP 823
            ++G R  RP                      FFKDPVKGFFRALDYTLPWDVE V D MP
Sbjct: 772  AAGHRGPRPHLLGRPLPAPPPADVALDELIGFFKDPVKGFFRALDYTLPWDVEAVEDAMP 831

Query: 824  VDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAA 883
            V+IDAL+EW +GDRML D+LRGMTPA AQQAEWRRG+LPPG+LGWR+A  +  + A LAA
Sbjct: 832  VEIDALQEWKIGDRMLDDMLRGMTPADAQQAEWRRGSLPPGRLGWRKAQEIASRSAALAA 891

Query: 884  EALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLAL 943
             A   R  D +A DVD+ +G  RR+TGTV  V+G R V+VTYSKL G+HLL SWI L+AL
Sbjct: 892  AARQHRTPDPRAIDVDVAIGPARRVTGTVPRVYGSRTVAVTYSKLDGRHLLASWIRLVAL 951

Query: 944  AAGYPDRDWLAVCIGRPARGTTPRVEG-LGGPDNPVDLLADLVAIYDAGRREPLPLPVKT 1002
             A +P  DW AVCIGR  RG     E  LG P+   ++L DLVA+YDAGR  P+PLP+KT
Sbjct: 952  TAHHPGTDWTAVCIGRGGRGGNQTKERLLGPPEAAAEVLRDLVAMYDAGRCAPIPLPLKT 1011

Query: 1003 SYAWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFE 1062
            SYAWAE  +    P ++AG++W++GR+PGEDAEPAHVR WG    L  L+    P     
Sbjct: 1012 SYAWAETEYHRGTPLREAGWKWKTGRFPGEDAEPAHVRVWGPHFPLSGLVSAGLPD---- 1067

Query: 1063 GETHRLGAYSSRLWLPLLRAER 1084
                    YS+RLW P+L AER
Sbjct: 1068 --------YSTRLWQPMLLAER 1081


>tr|A4T1L2|A4T1L2_MYCGI Tax_Id=350054 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Mycobacterium gilvum]
          Length = 1083

 Score = 1335 bits (3455), Expect = 0.0
 Identities = 686/1104 (62%), Positives = 801/1104 (72%), Gaps = 40/1104 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRA+RT                  FA +LVLV A+G ERWLSQRLS+ LG     
Sbjct: 1    MALHLHRADRTDLLADGLGAMLSDPPADPFAEDLVLVSARGTERWLSQRLSHVLGRGSGQ 60

Query: 58   --VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHF 115
              +CA V FR+PRSLIAELTGT + DPWSPDAMVWPLL VID+ L EPWC+TL  HLGHF
Sbjct: 61   DGICAGVTFRHPRSLIAELTGTREHDPWSPDAMVWPLLAVIDDCLAEPWCSTLGAHLGHF 120

Query: 116  EMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-----DGLPDDLAWQKALWQAL 170
              GEE ELRQGRRYAVARRLAGLFASYA QRP+LL DW     DGL  DL WQ  L++AL
Sbjct: 121  ADGEERELRQGRRYAVARRLAGLFASYATQRPRLLEDWLAGRTDGLDADLRWQPELYRAL 180

Query: 171  CERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXX 230
             +R+ ADPPH+RHA+T+ +L +SPTDLP+RLSLFGHTRLP TE+E               
Sbjct: 181  VDRVQADPPHVRHAETVARLVDSPTDLPERLSLFGHTRLPVTEIELLAAVATHHDLHLWL 240

Query: 231  PHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLP-EPDTDEFRGR 289
            PHPSD LW +L   +  +PRR+DTSHR VGHPLLATLGRDLRE+QR LP +  +DE  G 
Sbjct: 241  PHPSDALWTSLRDVRDVIPRRDDTSHRRVGHPLLATLGRDLRELQRCLPTDTVSDESLGS 300

Query: 290  SEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADD 349
               PDTLLGWLQSDI AD VR +GR H   DRS+QVHSCHGP+RQ+DVLREVLLG+L DD
Sbjct: 301  VARPDTLLGWLQSDIGADRVRAEGRTHDAGDRSVQVHSCHGPARQVDVLREVLLGMLEDD 360

Query: 350  PTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALV 409
            PTLEPRDILVMCPDIE YAPLI AGFGLGDVV           AHPAH+LRV+LADRAL 
Sbjct: 361  PTLEPRDILVMCPDIEAYAPLIVAGFGLGDVVS---------GAHPAHRLRVKLADRALT 411

Query: 410  QTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWG 469
            QTNP            G RATA EVL++AE+APVRARFGF+DDDLDA+  W RE+NIRWG
Sbjct: 412  QTNPLLGVARRLLELAGSRATAGEVLDVAEAAPVRARFGFSDDDLDAVGTWVRESNIRWG 471

Query: 470  FDQEHRRPYGVEFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFA 529
            FD++HRRPYGV+F+ NTWRFGIDRVLAGVAMSDDS AWL TTLPLDDVSSNRVELAGR A
Sbjct: 472  FDRDHRRPYGVDFVQNTWRFGIDRVLAGVAMSDDSRAWLDTTLPLDDVSSNRVELAGRLA 531

Query: 530  DFVEKLRRTVDQLSGTRPLHEWLDALTAGIDAL-ALADED-WPAAQMQREFAEITARAGD 587
            +FV++LR  V+ L+GT  L +WL  +  G+  L A+ D D W  +Q++RE A+I A AG 
Sbjct: 532  EFVDRLRDAVESLTGTAMLADWLARIRTGVSELTAVPDSDLWQHSQLERELADIAAAAGV 591

Query: 588  TA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 646
             A T                GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP
Sbjct: 592  HAGTELRLSDVRSLLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFP 651

Query: 647  RLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAV 706
            R+G VDGDDALARDPMTGERDIRSEDRQLLLDAI AAT+ LVITYTGANEYSGQ RPPAV
Sbjct: 652  RVGVVDGDDALARDPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQRRPPAV 711

Query: 707  PLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGAL-VP-DEPFTFDQTALVAARA 763
            P+ EL+DTL +TT     D V T HPLQPFD  NV PG L +P   PFTFD T L AARA
Sbjct: 712  PVVELLDTLDVTTSSPVRDRVHTSHPLQPFDIANVTPGELGMPVGTPFTFDPTTLTAARA 771

Query: 764  SSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDVMP 823
            ++G+R       +                  FF+DPVKGFFRALD+TLPWDV+G+ D +P
Sbjct: 772  TTGDREEHRPLLAEPLPAPPADDVALDDLIGFFRDPVKGFFRALDFTLPWDVDGLDDAIP 831

Query: 824  VDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAA 883
            VD+DAL+EW +G R+L D+ RGM+PA AQQAEWRRG+LPPG+LGWRRA  +  + A LAA
Sbjct: 832  VDVDALQEWKIGQRLLDDMQRGMSPAQAQQAEWRRGSLPPGRLGWRRAQEITTRSAALAA 891

Query: 884  EALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLAL 943
             A  +R  D  A D+D+ +G  RRLTGTV  ++G+R+V+VTYSKL G+HLL+SWI L+AL
Sbjct: 892  AAQQYRTPDPHAVDIDVAVGPARRLTGTVPRLYGERMVAVTYSKLAGRHLLESWIRLVAL 951

Query: 944  AAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTS 1003
             A  P  DW AVCIGR  RG   R   LG PD+  ++LADL+A+YDAGRR P+PLP+KTS
Sbjct: 952  TAHRPGTDWTAVCIGRGDRGRPTRERLLGPPDSAAEVLADLIAMYDAGRRAPIPLPLKTS 1011

Query: 1004 YAWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEG 1063
            YAWAE       P ++AG++W++GRYPGED +PAH+R WG    L DL+    PG     
Sbjct: 1012 YAWAETDFHRGQPLREAGWKWKTGRYPGEDQDPAHIRVWGPHLPLEDLVAAGLPG----- 1066

Query: 1064 ETHRLGAYSSRLWLPLLRAERPVR 1087
                   +++RLWLP+LRAER  R
Sbjct: 1067 -------FAARLWLPMLRAERSAR 1083


>sp|P96921|EX5C_MYCTU Tax_Id=1773 (recC)RecName:
            Full=Exodeoxyribonuclease V gamma chain;
            EC=3.1.11.5;[Mycobacterium tuberculosis]
          Length = 1097

 Score = 1293 bits (3345), Expect = 0.0
 Identities = 682/1106 (61%), Positives = 784/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|A5U014|A5U014_MYCTA Tax_Id=419947 (recC)SubName:
            Full=Exodeoxyribonuclease V subunit gamma;[Mycobacterium
            tuberculosis]
          Length = 1097

 Score = 1293 bits (3345), Expect = 0.0
 Identities = 682/1106 (61%), Positives = 784/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D6F1P1|D6F1P1_MYCTU Tax_Id=611302 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;[Mycobacterium
            tuberculosis T46]
          Length = 1097

 Score = 1293 bits (3345), Expect = 0.0
 Identities = 682/1106 (61%), Positives = 784/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D5ZD20|D5ZD20_MYCTU Tax_Id=537210 SubName: Full=Exonuclease
            subunit V gamma recC;[Mycobacterium tuberculosis T17]
          Length = 1097

 Score = 1293 bits (3345), Expect = 0.0
 Identities = 682/1106 (61%), Positives = 784/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D5YCX2|D5YCX2_MYCTU Tax_Id=520140 SubName: Full=Exonuclease
            subunit V gamma;[Mycobacterium tuberculosis EAS054]
          Length = 1097

 Score = 1293 bits (3345), Expect = 0.0
 Identities = 682/1106 (61%), Positives = 784/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|A4KEV8|A4KEV8_MYCTU Tax_Id=395095 SubName: Full=Exonuclease V
            (Gamma chain) recC;[Mycobacterium tuberculosis str.
            Haarlem]
          Length = 1097

 Score = 1293 bits (3345), Expect = 0.0
 Identities = 682/1106 (61%), Positives = 784/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|C6DU08|C6DU08_MYCTK Tax_Id=478434 SubName: Full=Exonuclease
            subunit V gamma recC;[Mycobacterium tuberculosis]
          Length = 1097

 Score = 1290 bits (3339), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAG  A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGMLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|A5WJZ6|A5WJZ6_MYCTF Tax_Id=336982 SubName: Full=Exonuclease V
            gamma subunit recC;[Mycobacterium tuberculosis]
          Length = 1097

 Score = 1290 bits (3339), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAG  A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGMLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D6FZS8|D6FZS8_MYCTU Tax_Id=478435 SubName: Full=Exonuclease
            subunit V gamma recC;[Mycobacterium tuberculosis KZN 605]
          Length = 1097

 Score = 1290 bits (3339), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAG  A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGMLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D5Z0L1|D5Z0L1_MYCTU Tax_Id=537209 SubName: Full=Exonuclease V
            (Gamma chain) recC;[Mycobacterium tuberculosis GM 1503]
          Length = 1097

 Score = 1290 bits (3339), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAG  A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGMLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|C1AKW2|C1AKW2_MYCBT Tax_Id=561275 (recC)SubName: Full=Putative
            exonuclease V gamma chain; EC=3.1.11.5;[Mycobacterium
            bovis]
          Length = 1097

 Score = 1290 bits (3337), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP  R     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAERSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|A1KGA9|A1KGA9_MYCBP Tax_Id=410289 (recC)SubName: Full=PRobable
            exonuclease V (Gamma chain) recC;
            EC=3.1.11.5;[Mycobacterium bovis]
          Length = 1097

 Score = 1290 bits (3337), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP  R     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAERSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D6FME2|D6FME2_MYCTU Tax_Id=611304 SubName: Full=Exonuclease
            subunit V gamma recC;[Mycobacterium tuberculosis K85]
          Length = 1097

 Score = 1290 bits (3337), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP  R     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAERSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D6FED7|D6FED7_MYCTU Tax_Id=611303 SubName: Full=Exonuclease
            subunit V gamma recC;[Mycobacterium tuberculosis CPHL_A]
          Length = 1097

 Score = 1290 bits (3337), Expect = 0.0
 Identities = 681/1106 (61%), Positives = 783/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP  R     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAERSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|Q7U1K9|Q7U1K9_MYCBO Tax_Id=1765 (recC)SubName: Full=PROBABLE
            EXONUCLEASE V (GAMMA CHAIN) RECC (EXODEOXYRIBONUCLEASE V
            GAMMA CHAIN)(EXODEOXYRIBONUCLEASE V POLYPEPTIDE);
            EC=3.1.11.5;[Mycobacterium bovis]
          Length = 1097

 Score = 1286 bits (3327), Expect = 0.0
 Identities = 680/1106 (61%), Positives = 782/1106 (70%), Gaps = 31/1106 (2%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP  R     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAERSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+    A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHLDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVK 1001
             LAA  P R+W A+CIGR              P +PV +L +LV +YDAGRREPLPLP+K
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLK 1011

Query: 1002 TSYAWAEARHCGDDPEQKAGFRWRSGRY-PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEE 1060
            TS AWA+AR  G DP   A   W++ R+ PG+D  PAHVRAWG  A    L+   R GEE
Sbjct: 1012 TSCAWAQARRDGQDPYPPARECWQTNRFRPGDDDAPAHVRAWGPRAPFEVLLGKPRAGEE 1071

Query: 1061 FEGETHRLGAYSSRLWLPLLRAERPV 1086
              GE  RLGA ++RLWLPLL AE  V
Sbjct: 1072 VAGEETRLGALAARLWLPLLAAEGSV 1097


>tr|D2PR48|D2PR48_KRIFD Tax_Id=479435 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Kribbella flavida]
          Length = 1102

 Score = 1215 bits (3144), Expect = 0.0
 Identities = 641/1110 (57%), Positives = 758/1110 (68%), Gaps = 39/1110 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M L+LHRAERT                  FA ELV+VPAKG+ERWLSQRL++RLG     
Sbjct: 1    MTLYLHRAERTDVLADGLGELLATPLADPFAEELVVVPAKGIERWLSQRLAHRLGAAEGS 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA V F +PRSL++ + G   DDPW+ DAM WPLL V+DESLD+ WC  +A HLG 
Sbjct: 61   GDGVCAGVRFTSPRSLVSAVLGLDQDDPWAADAMAWPLLAVLDESLDDAWCEPVARHLGQ 120

Query: 115  FEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDDLAWQK 164
            F+ G E ELR+GRRYAVA RLA LFA+YA QRP LLVDW      DG    + DDLAWQ 
Sbjct: 121  FDSGAEAELRRGRRYAVAARLARLFAAYAVQRPALLVDWGDGRDTDGRGVTIDDDLAWQP 180

Query: 165  ALWQALCERIDADPPHIRHAKTLVQLHE--SPTDLPQRLSLFGHTRLPATEVEXXXXXXX 222
             LW+ L +RIDA PP  RH  T+ QL +     DLP RLSLFGHTRLP TEVE       
Sbjct: 181  ELWRRLVDRIDAPPPPARHLSTVAQLRDRSESLDLPARLSLFGHTRLPLTEVELLSALAE 240

Query: 223  XXXXXXXXPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLLPE-P 281
                    PHPS  LW  L+ R     R  DTSH+   HPLLATLGRD RE+Q  L   P
Sbjct: 241  HRDVHLWLPHPSGELWDRLTGRTAG-DRAADTSHQMAEHPLLATLGRDSRELQLALAAVP 299

Query: 282  DTDEFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREV 341
              D         ++LLGWLQ+D+  + V  +GR    EDRS+QVH+CHG +RQ+DVLR+V
Sbjct: 300  AVDRHLPSPAARESLLGWLQNDLRGNKVSAEGRRPAAEDRSVQVHACHGTARQVDVLRDV 359

Query: 342  LLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRV 401
            LLG+L  DPTLEPRDILVMCPDIETYAPLI+A FGLGD         ++   HPAH+LRV
Sbjct: 360  LLGMLQADPTLEPRDILVMCPDIETYAPLISARFGLGD---------LDRYGHPAHRLRV 410

Query: 402  RLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWT 461
            +LADR+L QTNP            G RATAS+VL+LAE+ PVR RF FTDDDLD +TAW 
Sbjct: 411  QLADRSLTQTNPLLGVASQLLDLAGSRATASQVLDLAETEPVRRRFRFTDDDLDTVTAWV 470

Query: 462  REANIRWGFDQEHRRPYGV-EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSN 520
            REA +RW FD+  R  +G+ ++  NTWRFG+DRVLAGV MS D+HAW+GTTLPLDDV S 
Sbjct: 471  REAGVRWAFDRGDRDRFGLADYPQNTWRFGLDRVLAGVTMSADAHAWIGTTLPLDDVGST 530

Query: 521  RVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALAL--ADEDWPAAQMQREF 578
            R+ELAGRFA++V++LR   D+L GT+PL  WLDAL  GI+ L    AD+ W   Q+ REF
Sbjct: 531  RIELAGRFAEYVDRLRAATDRLDGTQPLATWLDALRDGIERLTRVGADDGWQVGQVHREF 590

Query: 579  AEITARAGDTA-TSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCL 637
            AE+ A AG+ A T                GRPTRANFR+G+LTVCTMVPMRSVPHRVVCL
Sbjct: 591  AEVAAGAGELAVTPLRLPDVRSLLSAHLAGRPTRANFRSGSLTVCTMVPMRSVPHRVVCL 650

Query: 638  VGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEY 697
            +GLDDGVFPR G  DGDD LAR P+TGERD+RSEDRQL+LDAILAAT++LVITYTGANEY
Sbjct: 651  LGLDDGVFPRFGLADGDDVLARCPVTGERDVRSEDRQLMLDAILAATESLVITYTGANEY 710

Query: 698  SGQARPPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQT 756
            SGQ RPPAVPL EL+D L  TTE    + V+  HPLQPFD++N+  G L    PFTFD  
Sbjct: 711  SGQPRPPAVPLGELLDALDRTTESPVRETVVVNHPLQPFDRKNLEAGRLGTPGPFTFDPA 770

Query: 757  ALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVE 816
            ALVAAR   G R  RPAF +                  FF+DPVKGFFRALD TLPW+V+
Sbjct: 771  ALVAARVGGGSRPPRPAFLAEPLTLPGGEDVALADLLAFFRDPVKGFFRALDVTLPWEVD 830

Query: 817  GVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRD 876
            GVSD MPV+ID LE+W+VGDRML D+L G+ P AA  AEWRRGTLPPG+LGWR A  LRD
Sbjct: 831  GVSDAMPVEIDNLEKWSVGDRMLRDMLAGIHPDAALNAEWRRGTLPPGRLGWRTATDLRD 890

Query: 877  QCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQS 936
                LA  A   R     AYDVD+DLGGGRRLTGTV  V G RLVSV+YS+L  K LL S
Sbjct: 891  IARGLAVAAYPHRQGGATAYDVDVDLGGGRRLTGTVPGVHGYRLVSVSYSRLDAKQLLTS 950

Query: 937  WIPLLALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGP--DNPVDLLADLVAIYDAGRRE 994
            WI LLAL+A   D +W A+ IGRP  G TP    L GP       LLADL+++YD GRRE
Sbjct: 951  WIQLLALSANDEDHNWTALAIGRPRSGRTP-ASRLFGPVGAQARTLLADLISVYDGGRRE 1009

Query: 995  PLPLPVKTSYAWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQP 1054
            PLPLP+KTS+AW +AR   D+P   AG RWR   Y GE+A+PAHVR WG +A L+ L++P
Sbjct: 1010 PLPLPLKTSFAWCQARRTDDEPMIAAGRRWRPANYDGENADPAHVRVWGPNAPLKVLLEP 1069

Query: 1055 LRPGEEFEGETHRLGAYSSRLWLPLLRAER 1084
             RPGE++ GE  RLGAY++R+W P+LR E+
Sbjct: 1070 TRPGEQWPGEPTRLGAYAARVWEPMLRFEQ 1099


>tr|D5YNT1|D5YNT1_MYCTU Tax_Id=515616 SubName: Full=Exonuclease
            subunit V gamma recC; Flags: Fragment;[Mycobacterium
            tuberculosis 02_1987]
          Length = 1007

 Score = 1190 bits (3079), Expect = 0.0
 Identities = 628/1018 (61%), Positives = 720/1018 (70%), Gaps = 35/1018 (3%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1    MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61   ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115  FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
            F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121  FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169  ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
            AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181  ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229  XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
              PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241  WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285  EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
            EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301  EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345  LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
            LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361  LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405  DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
            DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412  DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465  NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
            NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472  NIRWGFDPTHRRSYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524  LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
            LAGR A+ VE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532  LAGRLAELVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584  RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
            RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592  RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643  GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
            GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652  GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703  PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
            PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712  PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762  RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
            +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772  QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822  MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
            +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832  IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882  AAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLL 941
            AA AL  RD  GQA+DVD+DLG GRRL+GTV+PVFG R VSVTYSKL  KH+L +WI L+
Sbjct: 892  AAAALAHRDGHGQAHDVDVDLGDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLV 951

Query: 942  ALAAGYPDRDWLAVCIGRPARGT---TPRVEGLGGPDNPVDLLADLVAIYDAGRREPL 996
             LAA  P R+W A+CIGR                GP   +     +V +YDAGRREPL
Sbjct: 952  TLAAQEPGREWSALCIGRSKTRNHIGQKAFRAAAGPGGGIP--GRVVLLYDAGRREPL 1007


>tr|D5Y0V5|D5Y0V5_MYCTU Tax_Id=520141 SubName:
           Full=Exodeoxyribonuclease subunit V gamma; Flags:
           Fragment;[Mycobacterium tuberculosis T85]
          Length = 950

 Score = 1110 bits (2871), Expect = 0.0
 Identities = 591/960 (61%), Positives = 676/960 (70%), Gaps = 35/960 (3%)

Query: 3   MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
           MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1   MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58  ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
              VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61  ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115 FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
           F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169 ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
           AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229 XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
             PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285 EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
           EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345 LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
           LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405 DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
           DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412 DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465 NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
           NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472 NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524 LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
           LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532 LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584 RAGDTATSXXXXXXXXXXXXXXX-GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
           RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592 RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643 GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQAR 702
           GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVITYTGA+E +GQ R
Sbjct: 652 GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPR 711

Query: 703 PPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAA 761
           PPAVPLAEL+D L  TT     + +L  HPLQPFD++NV PGAL+  +PFTFD  AL AA
Sbjct: 712 PPAVPLAELLDALDQTTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAA 771

Query: 762 RASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFRALDYTLPWDVEGVSDV 821
           +A++G+R    AF S                 +FFKDPVKGFFRALDYTLPWDV+ V D 
Sbjct: 772 QAAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRALDYTLPWDVDTVEDS 831

Query: 822 MPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALL 881
           +PV +DAL EWTVG+RML D+LRG+ P  A  +EWRRGTLPPG+LG RRA  +R++   L
Sbjct: 832 IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891

Query: 882 AAEALGFRDTDGQAYDVDIDL---GGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWI 938
           AA AL  RD  GQA+D++IDL       R  G   P    R VS TYS    KH+L + I
Sbjct: 892 AAAALAHRDGHGQAHDINIDLRVRAATERHGG--HPCSAGRTVSETYSNWRPKHVLPARI 949


>tr|A1SDB1|A1SDB1_NOCSJ Tax_Id=196162 SubName: Full=DNA
            helicase/exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Nocardioides sp.]
          Length = 1113

 Score =  932 bits (2408), Expect = 0.0
 Identities = 534/1135 (47%), Positives = 662/1135 (58%), Gaps = 88/1135 (7%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M L +HRA RT                  FA E+V+VPAKGVERWL+QRLS+RLG     
Sbjct: 1    MTLQIHRASRTDVLADALGDLLRTPLADPFAEEVVVVPAKGVERWLTQRLSHRLGAGPRG 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               VCA V F NPRSL++ L G   DDPW P+ +VWPLL  IDESL E   ATL  HLGH
Sbjct: 61   DDGVCAGVRFLNPRSLVSLLLGRERDDPWDPERLVWPLLATIDESLGEREFATLGRHLGH 120

Query: 115  FEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-----------DGLPDDLAWQ 163
               G + ELR+ RRY+VA RLA LFASYA QRP L+  W            GLP DLAWQ
Sbjct: 121  GVDGADGELRRNRRYSVALRLAHLFASYALQRPSLVTAWREGRDGEHGGEQGLPPDLAWQ 180

Query: 164  KALWQALCERIDADPPHIRHAKTLVQLHESPTDLP--QRLSLFGHTRLPATEVEXXXXXX 221
              LW+ L  ++DA PP +RHA+T   L      LP   RLSLFGHTR+P TEV       
Sbjct: 181  PELWRRLIAQVDAPPPDVRHAQTCAALQAGGDGLPLPDRLSLFGHTRIPVTEVALLKALG 240

Query: 222  XXXXXXXXXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLL 278
                     P PS  LW  L+   GP   +PR  D S   VGHPLLA+LGRD RE++RLL
Sbjct: 241  EHRDVHLFLPQPSPVLWDDLADLGGPGGVVPRAADDSVERVGHPLLASLGRDARELRRLL 300

Query: 279  PEPDTDEFR-------GRSEYPDTLLGWLQSDIAADAVRPQGRHHRRE----DRSIQVHS 327
                ++E R       G +  P TLLGWLQ D+ A+          RE    D S+QVH+
Sbjct: 301  DGVSSEEVRPPAGTPTGSTTDPVTLLGWLQHDLRANHAPSYDERSTRELDPDDHSLQVHA 360

Query: 328  CHGPSRQIDVLREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGA 387
            CHGP+RQ+DVLREVL+GLL DDPTLEPRD+LVMCPDIETYAPLI+AGFGL          
Sbjct: 361  CHGPARQVDVLREVLVGLLEDDPTLEPRDVLVMCPDIETYAPLISAGFGLATT------- 413

Query: 388  HINLSAHPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARF 447
                  HPAH+LRV+LADRAL  TNP            GGR TAS+VL+LA + PVR RF
Sbjct: 414  ----DGHPAHRLRVKLADRALTSTNPLLAVAGDLLDLAGGRVTASDVLDLAGTDPVRRRF 469

Query: 448  GFTDDDLDAITAWTREANIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHA 506
            GFTDD+LD ++ W   A +RWG D+E R  + +E F HNTWR G+DR+L GVAMS D H 
Sbjct: 470  GFTDDELDRVSRWVARAGVRWGLDEESRAAFRMERFPHNTWRTGLDRILLGVAMSGDDHH 529

Query: 507  WLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALA--L 564
             LG  LPLDDV+S+ ++LAGR A+ V ++ RT+  L+G R + +W   L  G+ +L    
Sbjct: 530  HLGRGLPLDDVASSEIDLAGRLAELVARVDRTLTVLAGARTVADWATGLRDGVRSLVDVA 589

Query: 565  ADEDWPAAQMQREFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTM 624
            AD+ W   Q +RE     A + +                   GRPTRANFRTG+LTV TM
Sbjct: 590  ADDAWQVPQFERELGRAAASSHEGGLELRLADVRAMLESRLAGRPTRANFRTGSLTVATM 649

Query: 625  VPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAAT 684
            VPMRSVPHRVVCLVGLDDGVFPR GAVDGDD L R P+TGERD+RSEDRQLLLDA+LAAT
Sbjct: 650  VPMRSVPHRVVCLVGLDDGVFPRAGAVDGDDVLGRHPLTGERDVRSEDRQLLLDAVLAAT 709

Query: 685  QTLVITYTGANEYSGQARPPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPG 743
            + LVITY+GA+E SG + PPAVPL E++D    TT     D VLTRHPLQP+D RN    
Sbjct: 710  EHLVITYSGADEQSGASLPPAVPLGEILDAADRTTNAPVRDRVLTRHPLQPYDARN---- 765

Query: 744  ALVPDEPFTFDQTALVAARASSGERAMRPAFFS-----XXXXXXXXXXXXXXXXXNFFKD 798
                + PF+FD  AL  AR++ G R   P                          +F   
Sbjct: 766  -FTRERPFSFDTAALAGARSARGVRREPPPLLDGPLPPRLALDGRAADVSLQDLRDFLGH 824

Query: 799  PVKGFFRA-LDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWR 857
            PV+ F R  LD   P++ + ++D +PV +D+LE+W +GDR+L  +L G  P A   AE  
Sbjct: 825  PVRAFLRGRLDVATPFEPDDLADAIPVSLDSLEKWQIGDRLLRQLLAGQDPVAVLTAEQL 884

Query: 858  RGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFG 917
             GTLPP  LG      + ++C  L +     RD + ++ DVD+DL  GRRLTGTV  V+G
Sbjct: 885  AGTLPPRGLGTLALHEVAEECQRLWSRTADLRDGERRSVDVDVDLRDGRRLTGTVPGVYG 944

Query: 918  DRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGP--D 975
             R+VS+ YS+L  +  L +W+ LLAL+A YPD+ W A  +G+   G       L GP   
Sbjct: 945  SRVVSLGYSRLNARQRLHAWVDLLALSATYPDQHWTAHAVGKDRAGPK---RALCGPLDH 1001

Query: 976  NPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARH---CGDD--PEQKAGFRWRSGRY- 1029
              V  L DLV + D G   PLP+PVKT  AWA+A      G D  P + A   W +  + 
Sbjct: 1002 RAVGWLRDLVDLRDRGLCAPLPVPVKTGAAWADAHARELMGQDHPPVEAARREWETDPHN 1061

Query: 1030 ----PGEDAEPAHVRAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLL 1080
                 GEDA+P H R +G  A +  L+               LG ++  +W PLL
Sbjct: 1062 QFGITGEDADPYHQRVYGPAAPVEALLDA------------GLGEHAWAIWEPLL 1104


>tr|D5XQQ8|D5XQQ8_MYCTU Tax_Id=515617 SubName: Full=Exonuclease
           subunit V gamma recC;[Mycobacterium tuberculosis T92]
          Length = 734

 Score =  868 bits (2243), Expect = 0.0
 Identities = 456/708 (64%), Positives = 511/708 (72%), Gaps = 29/708 (4%)

Query: 3   MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
           MALHLHRAERT                  FA ELVLV A+GVERWLSQRLS  LG     
Sbjct: 1   MALHLHRAERTDLLADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGR 60

Query: 58  ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
              VCA + FRNP+SLIAE+TGT DDDPWSP+A+ WPLL VID SLDEPWC TLA+HLGH
Sbjct: 61  ADGVCAGIAFRNPQSLIAEITGTLDDDPWSPEALAWPLLAVIDASLDEPWCRTLASHLGH 120

Query: 115 FEMGE-EYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-DG----LPDDLAWQKALWQ 168
           F   + E ELR+GRRY+VARRLAGLFASYARQRP LL  W DG    LP DLAWQ  LW+
Sbjct: 121 FATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDGDLGELPGDLAWQPPLWR 180

Query: 169 ALCERIDADPPHIRHAKTLVQLHESPTDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXX 228
           AL   + ADPPH+RH KT+ +L + P DLP RLSLFGHTRL  T+V+             
Sbjct: 181 ALVTTVGADPPHVRHDKTIARLRDGPADLPARLSLFGHTRLACTDVQLLDALAVHHDLHL 240

Query: 229 XXPHPSDTLWQALSTRKGP---LPRREDTSHRDVGHPLLATLGRDLREMQRLLPEPD-TD 284
             PHPSD LW+AL+  +G    LPRR+DTS R   HPLL TLGRD+RE+QR LP    TD
Sbjct: 241 WLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQHPLLETLGRDVRELQRALPAARATD 300

Query: 285 EFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLG 344
           EF G +  PDTLLGWLQ+DIA +A RP GR     DRS+QVH+CHGP+RQIDVLREVLLG
Sbjct: 301 EFLGATTKPDTLLGWLQADIAGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLG 360

Query: 345 LLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLA 404
           LL DDPTL+PRDI+VMCPDI+TYAPLI AGFGLG+V             HPAH+LRVRLA
Sbjct: 361 LLEDDPTLQPRDIVVMCPDIDTYAPLIVAGFGLGEVAG---------DCHPAHRLRVRLA 411

Query: 405 DRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREA 464
           DRAL QTNP              RATAS++LNLA++APVRA+FGF DDDLD IT W RE+
Sbjct: 412 DRALTQTNPLLSVAAELLTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRES 471

Query: 465 NIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVE 523
           NIRWGFD  HRR YG++  +HNTWRFG+DR+L GVAMS+DS AWL T LPLDDV SNRVE
Sbjct: 472 NIRWGFDPTHRRRYGLDTVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVE 531

Query: 524 LAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALADEDWPAAQMQREFAEITA 583
           LAGR A+FVE+L   V  LSG RPL  WLDAL  GID L   ++ W  AQ+QREFA++ A
Sbjct: 532 LAGRLAEFVERLHHVVGGLSGARPLVAWLDALATGIDLLTACNDGWQRAQVQREFADVLA 591

Query: 584 RAGDTATS-XXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 642
           RAG  A                  GRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD
Sbjct: 592 RAGSRAAPLLRLPDVRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDD 651

Query: 643 GVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVIT 690
           GVFPRL   DGDD LAR+PMTGERDIRSEDRQLLLDAI AATQTLVIT
Sbjct: 652 GVFPRLSHPDGDDVLAREPMTGERDIRSEDRQLLLDAIGAATQTLVIT 699


>tr|C8XGX0|C8XGX0_NAKMY Tax_Id=479431 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Nakamurella multipartita]
          Length = 1141

 Score =  860 bits (2221), Expect = 0.0
 Identities = 496/1092 (45%), Positives = 627/1092 (57%), Gaps = 58/1092 (5%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            M LH+HRA+R                   F  ++V VP +GVERWL+QRL++RLG     
Sbjct: 1    MGLHVHRAQRADALAAALGDLLAEPPADPFGVDVVAVPTRGVERWLTQRLAHRLGTRDGR 60

Query: 58   ---VCAAVEFRNPRSLIAELTGTADDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGH 114
               +CAAV F +P +L+ EL G   DDPW+PDA VWPLL  I+ S+ EPWCA LA HLG+
Sbjct: 61   SDGICAAVRFPSPTTLVDELAGDRADDPWTPDAAVWPLLAAIEASVHEPWCALLAEHLGY 120

Query: 115  FEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDDLAWQK 164
                 + E R+GRRYAVARR+AGLF  YA  RP+++  W      DG    +P DL+WQ 
Sbjct: 121  RGDDAQAEHRRGRRYAVARRIAGLFDGYAEHRPEMVAAWSQGGDDDGWGEPVPADLSWQP 180

Query: 165  ALWQALCERIDADPPHIRHAKTLVQLHESP--TDLPQRLSLFGHTRLPATEVEXXXXXXX 222
             LW+ L +RIDA  P    A+   +L   P   DLP+R+SLFG T LP  +V        
Sbjct: 181  RLWRRLRDRIDAPDPVATFAQVAARLAADPGAVDLPERVSLFGATALPHRQVLLLSALAH 240

Query: 223  XXXXXXXXPHPSDTLWQALSTRKGPLP----RREDTSHRDVGHPLLATLGRDLREMQRLL 278
                    PHPS  LW  +   + P+P    RR+D +     HPLLA++GRD+RE++ +L
Sbjct: 241  HRDVHLWLPHPSPVLWDRVGELRPPVPGRIRRRDDPTAGAATHPLLASMGRDVRELRTVL 300

Query: 279  P-EPDTDEFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHR----REDRSIQVHSCHGPSR 333
                D D +    + P TLLG LQ D++ +     G   +      D S++VH+ HGP R
Sbjct: 301  AGRIDRDTWHRADDPPATLLGRLQRDLSDNRRPGPGMADKPVVDATDDSVRVHAAHGPGR 360

Query: 334  QIDVLREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSA 393
            Q+DVLR+V++GLLADDPTL P DIL+MCPDIE +APL+   FGL D VP           
Sbjct: 361  QVDVLRDVVIGLLADDPTLHPADILIMCPDIEAFAPLLQGAFGLADSVP---------DG 411

Query: 394  HPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDD 453
            HPAH+L+VRLADRAL QTNP            G R TAS+VL+ A  APVR RFGF DD+
Sbjct: 412  HPAHQLQVRLADRALRQTNPLLATLDRLLDLAGSRVTASDVLDFAAFAPVRHRFGFDDDE 471

Query: 454  LDAITAWTREANIRWGFDQEHRRPYGV-EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTL 512
            L  +  W   A  RWG D EHRR YG+ E+  NTWR  +DR+L GV MSD+    L T L
Sbjct: 472  LSTLADWVAAAGARWGLDAEHRRRYGLAEYGQNTWRAALDRILLGVCMSDEPGNRLETAL 531

Query: 513  PLDDVSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALAL--ADEDWP 570
            PLD++ S  V+LAGR A+ +++L   VD LS    +  W   L AG+ +L    A   W 
Sbjct: 532  PLDEIGSADVDLAGRLAELIDRLATVVDTLSSRHSVQRWCAELLAGVQSLTSVPARAAWQ 591

Query: 571  AAQMQREFAEI---TARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPM 627
             A+ + E A +    A AG T                  GRPTRANFRTGTLTVCTM+PM
Sbjct: 592  VAEFRAEVAAVQRHAAAAGSTGLELGLADVRALLAGALAGRPTRANFRTGTLTVCTMMPM 651

Query: 628  RSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTL 687
            RSVPHRV+CL+GLDDGVFPR    DGDD L R+P  GERD+RS+DRQL+LDAI+AAT+ L
Sbjct: 652  RSVPHRVICLLGLDDGVFPRGAREDGDDLLIREPACGERDLRSQDRQLMLDAIVAATEKL 711

Query: 688  VITYTGANEYSGQARPPAVPLAELIDTLKIT----TEDSALD-VLTRHPLQPFDKRNVIP 742
            VITY+GA+E +G  RPPAVP+ EL+D L  T    T  +  D VL RHPLQPFD R +  
Sbjct: 712  VITYSGADERTGAQRPPAVPVGELLDALDDTATTATGGAVRDLVLVRHPLQPFDARTLTA 771

Query: 743  GALVPDEPFTFDQTALVAARASSGER--AMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPV 800
            GAL    PFTFD  AL  ARA +G R  A R                           P 
Sbjct: 772  GALGRVGPFTFDPVALGGARALAGPRRPAGRLVPAPLPAPDRPPADVELAEVIEVLTHPA 831

Query: 801  KGFFRA-LDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRG 859
            KGF R  LD  +P++ +   D +PVD+DAL+EW VGDR+L D L G+     +QAEWRRG
Sbjct: 832  KGFLRRRLDVAVPFEQDDPPDDLPVDLDALQEWGVGDRILRDRLAGVPEQECRQAEWRRG 891

Query: 860  TLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDR 919
             LPP  LG R    +      L       R       +V + L  GRRL GTV  V G  
Sbjct: 892  VLPPAALGGRALERVLRDVRPLVDRTATLRAAPRHTVEVSVPLPDGRRLRGTVGGVHGIG 951

Query: 920  LVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPARGTTPRVEGLGG--PDNP 977
            LV+V+YSKL  +  LQSW+  LAL A  P   W A  +GR  RG  P+   L     +  
Sbjct: 952  LVTVSYSKLAPRARLQSWLAFLALTASDPALAWTAAAVGRAERG-RPQCATLAALPGERA 1010

Query: 978  VDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCG---DDPEQKAGFRWRSGRYPGEDA 1034
             +LL DLV +Y+ G R PLPLP+KT   +A+AR  G   D  + +A   W  G+YPGE  
Sbjct: 1011 RELLIDLVGLYEEGLRAPLPLPLKTGEKYADARRRGMDHDKAQDQAAATWTGGKYPGERQ 1070

Query: 1035 EPAHVRAWGRDA 1046
            + A++R WGRDA
Sbjct: 1071 DAANMRVWGRDA 1082


>tr|Q0SFN7|Q0SFN7_RHOSR Tax_Id=101510 (recC)SubName:
            Full=Exodeoxyribonuclease V gamma subunit;
            EC=3.1.11.5;[Rhodococcus sp.]
          Length = 1086

 Score =  795 bits (2053), Expect = 0.0
 Identities = 477/1114 (42%), Positives = 606/1114 (54%), Gaps = 69/1114 (6%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG------- 57
            L LHRAER+                  FA E+V VPAKGVERWL+QRLS  LG       
Sbjct: 2    LVLHRAERSTTLASALGDVLATPLSDPFAREVVAVPAKGVERWLTQRLSTALGARPGVGD 61

Query: 58   -VCAAVEFRNPRSLIAEL----TG-TADDDPWSPDAMVWPLLGVIDESLDEPWCATLATH 111
             V A ++F +P  L+ E     TG +ADDDPW+P  ++W LLGV+D+ L EPWCA LA H
Sbjct: 62   GVAANIDFPSPTRLVDECLAAATGVSADDDPWNPSRVLWALLGVVDDCLSEPWCAVLAKH 121

Query: 112  LGH-FEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDWDG----------LPDDL 160
            LGH     +  + R GRRYA A  L  LF SYA QRP +LVDW G          L DDL
Sbjct: 122  LGHGLPDRDPDDHRPGRRYATASHLTDLFRSYAAQRPAMLVDWAGGRDTDGAGGPLDDDL 181

Query: 161  AWQKALWQALCERIDADPPHIRHAKTLVQLHESP--TDLPQRLSLFGHTRLPATEVEXXX 218
             WQ  LW+ L E+I +  P  R      +L   P   +LP RLSLFG TRL   ++    
Sbjct: 182  LWQAELWRRLREKIGSPAPAERLDSACARLRAEPDLVELPARLSLFGPTRLATDQIAVLA 241

Query: 219  XXXXXXXXXXXXPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLL 278
                        PHPS T+W +LST    L R +D +   V HPLL++L RD+RE++  L
Sbjct: 242  ALAVNRDVHLWLPHPSPTMWSSLSTADSVLARADDPTALSVAHPLLSSLARDVRELESRL 301

Query: 279  PEPDTDEFRGRSEYP-DTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDV 337
               D D+       P D+LLG LQ+D+  D  R         D S+QVH+CHGP+RQ++V
Sbjct: 302  TRLDVDDLHHEGPAPRDSLLGCLQADVRDD--RAPALAECTADTSVQVHACHGPARQVEV 359

Query: 338  LREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAH 397
            LRE LL L  DDPTLEPRD+LVMCPD+E+YAPLI A FG             ++  HP H
Sbjct: 360  LRECLLHLFEDDPTLEPRDVLVMCPDVESYAPLIRAAFGQ------------DVLGHPGH 407

Query: 398  KLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAI 457
            +LRVRLADRAL QTNP              R TAS+VL+L+ +APVR RF F DDDL+ I
Sbjct: 408  RLRVRLADRALHQTNPVLAVVSTLLELADARVTASQVLDLSAAAPVRRRFRFGDDDLERI 467

Query: 458  TAWTREANIRWGFDQEHRRPYGV-EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDD 516
              W      RWG     R  +G+ +F  NT+   +DR+L G A  +    WL   LPLDD
Sbjct: 468  REWATATGARWGIGPRQRAAFGLGDFPQNTFTTALDRILLGAAADESDGEWLALALPLDD 527

Query: 517  VSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALA--LADEDWPAAQM 574
            V SN ++L GR A+FV++L   +  L G + + +W  ALT  +D L    A + W  AQ 
Sbjct: 528  VDSNDIDLTGRLAEFVDRLDVALRGLGGPQSVADWSSALTRALDLLVDVSAADTWQLAQA 587

Query: 575  QREFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRV 634
            +RE        GD                   GRPTRANFRTG LTVCTMVPMRSVPHRV
Sbjct: 588  RRELGSAMEHGGDAVLRLSDVRAMLATRLA--GRPTRANFRTGELTVCTMVPMRSVPHRV 645

Query: 635  VCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGA 694
            V L+GLDD VFPR  +VDGDD LAR+P+ GERD RSEDRQLLLDA+++A++ L++ YTGA
Sbjct: 646  VVLLGLDDEVFPRGVSVDGDDVLARNPLLGERDPRSEDRQLLLDAVMSASEKLLLFYTGA 705

Query: 695  NEYSGQARPPAVPLAELIDTLKITTEDSAL-DVLTRHPLQPFDKRNVIPGALVPDEPFTF 753
            +  +G +RPPA+PL+EL+D +  T    AL  ++TRHPLQPFD RN       P+ PF+F
Sbjct: 706  DPVTGMSRPPAIPLSELLDAVAATVGSDALPGIVTRHPLQPFDARN-----FRPEHPFSF 760

Query: 754  DQTALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFR-ALDYTLP 812
            D+ AL  ARA+       PAF                    F   P + F R  L   +P
Sbjct: 761  DRAALAGARAAQHPPEPEPAFLPAPLVPPPLGDVDLADLIAFLVHPTQAFLRQRLGLRVP 820

Query: 813  WDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAI 872
               E ++D + V  D L  W +G RML   L G+  A  + AEWRRGTLPP +LG     
Sbjct: 821  DVDEDLADALEVSPDPLARWDLGQRMLVARLTGVELADFRAAEWRRGTLPPFKLGESVLG 880

Query: 873  ALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKH 932
             +      L A +        +  DVD+DLG GRRLTGTV  V G  + + TYSKLG KH
Sbjct: 881  GIEHAVESLVAVSGSVHVGRAETVDVDVDLGSGRRLTGTVGGVHGSVIATTTYSKLGPKH 940

Query: 933  LLQSWIPLLALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGR 992
             L +W  LLA+AA   + +W AV  GR A         L  P+N ++ L  LV + D G 
Sbjct: 941  RLAAWAQLLAVAASDNETEWTAVTTGRGAYSRPAWRSTLTAPENALEELVRLVELRDLGL 1000

Query: 993  REPLPLPVKTSYAWAEARHCG---DDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLR 1049
              PLP+    S A+AE RH G   +D  + A   W S      D    +V  +G      
Sbjct: 1001 HAPLPIATGASAAYAERRHGGSSMEDAIEAARKEWSSDFGDSRDRHITYV--YGSS---- 1054

Query: 1050 DLMQPLRPGEEFEGETHRLGAYSSRLWLPLLRAE 1083
                   PG +  G+   +  Y+ +LW PLL AE
Sbjct: 1055 -------PGIDVLGDAVTIENYARQLWAPLLAAE 1081


>tr|C1AXR3|C1AXR3_RHOOB Tax_Id=632772 (recC)SubName:
            Full=Exodeoxyribonuclease V gamma chain;
            EC=3.1.11.5;[Rhodococcus opacus]
          Length = 1089

 Score =  783 bits (2023), Expect = 0.0
 Identities = 479/1117 (42%), Positives = 608/1117 (54%), Gaps = 72/1117 (6%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG------- 57
            L LHRAER+                  FA E+V VPAKGVERWL+QRLS  LG       
Sbjct: 2    LVLHRAERSTTLASALGDVLSTPLSDPFAREIVAVPAKGVERWLTQRLSTALGARPGVGD 61

Query: 58   -VCAAVEFRNPRSLIAEL----TG-TADDDPWSPDAMVWPLLGVIDESLDEPWCATLATH 111
             V A ++F +P  L+ E     TG +ADDDPW P  ++W LL V+D+ LDEPWCA LA H
Sbjct: 62   GVAANIDFPSPARLVDECLAAATGVSADDDPWHPSRVLWALLAVVDDCLDEPWCAVLAKH 121

Query: 112  LGHFEMGEEYE-LRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDDL 160
            LGH   G + +  R GRRYA A  L  L+ SYA QRP++LVDW      DG    L DDL
Sbjct: 122  LGHCRPGSDPDDHRPGRRYATALHLTDLYRSYAAQRPEMLVDWAAGRDTDGAGGSLDDDL 181

Query: 161  AWQKALWQALCERIDADPPHIRHAKTLVQLHESP--TDLPQRLSLFGHTRLPATEVEXXX 218
             WQ  LW+ L  RI    P  R      +L E P   +LP RLSLFG TRL   ++    
Sbjct: 182  LWQAELWRRLRARIGGPAPAERLDSACARLREEPDLVELPGRLSLFGPTRLATDQLAVIA 241

Query: 219  XXXXXXXXXXXXPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRLL 278
                        PHPS  LW +LST  G L R +D +   V H LL++L RD+RE++  L
Sbjct: 242  ALAVNRDVHLWLPHPSPALWSSLSTAGGVLARADDRTALSVTHLLLSSLARDVRELESRL 301

Query: 279  PEPDTDEFRGRSEYP-DTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDV 337
               D D+       P D+LLG LQ+D+  D  R         D S+QVH+CHGP+RQ++V
Sbjct: 302  TRLDVDDLHHPGPPPPDSLLGRLQADVRDD--RAPALSECTADASVQVHACHGPARQVEV 359

Query: 338  LREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAH 397
            LRE LL L  DDPTLEPRD+LVMCPD+E+YAPLI A FG             ++  HP H
Sbjct: 360  LRECLLHLFEDDPTLEPRDVLVMCPDVESYAPLIRAAFGQ------------DVLGHPGH 407

Query: 398  KLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAI 457
            +LRVRLADRAL QTNP              R TAS++L+L+ +APVR RF F DDDL+ I
Sbjct: 408  RLRVRLADRALHQTNPVLAVVSSLLELADARVTASQILDLSAAAPVRRRFRFGDDDLERI 467

Query: 458  TAWTREANIRWGFDQEHRRPYGV-EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDD 516
              W      RWG     R  +G+ +F  NT+   +DR+L G A  +    WL   LPLDD
Sbjct: 468  REWATATGARWGIGPRQRAAFGLGDFPQNTFTTALDRILLGAAADESEGEWLALALPLDD 527

Query: 517  VSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALA--LADEDWPAAQM 574
            V SN ++L GR A+FV++L   +  L+G + +  W  ALT  +D L    A + W  AQ 
Sbjct: 528  VDSNDIDLTGRLAEFVDRLDVALRGLAGPQSVAAWSSALTRALDLLVDVSAGDTWQLAQA 587

Query: 575  QREFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRV 634
            +RE        GDT                  GRPTRANFRTG LTVCTMVPMRSVPHRV
Sbjct: 588  RRELGAAMEHGGDTVLRLSDVRAMLATRLA--GRPTRANFRTGELTVCTMVPMRSVPHRV 645

Query: 635  VCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGA 694
            V L+GLDD VFPR  +VDGDD LAR+P+ GERD RSEDRQLLLDA+++A++ L++ YTGA
Sbjct: 646  VVLLGLDDEVFPRGASVDGDDVLARNPLIGERDPRSEDRQLLLDAVMSASEKLLLFYTGA 705

Query: 695  NEYSGQARPPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVPDEPFTF 753
            +  +G +RPPA+PL+EL+D +  T    AL  ++TRHPLQPFD RN       P+ PF+F
Sbjct: 706  DPVTGMSRPPAIPLSELLDAVAATAGSDALPAIVTRHPLQPFDARN-----FRPEHPFSF 760

Query: 754  DQTALVAARASSGERAMRPAFF-SXXXXXXXXXXXXXXXXXNFFKDPVKGFFR-ALDYTL 811
            D+ AL  ARA+       PAF  +                  F   P + F R  L   +
Sbjct: 761  DRAALAGARAAQYPPEPEPAFLPAPLGPPQRGDVVDLADLVAFLVHPTQAFLRQRLGLRV 820

Query: 812  PWDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRA 871
            P + E ++D + V  D L  W +G RML   L G  PA  + AEWRRGTLPP +LG    
Sbjct: 821  PDEDEDLADALDVAPDPLARWDLGQRMLVARLSGTEPADFRAAEWRRGTLPPFKLGESVL 880

Query: 872  IALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGK 931
              +      L A +        +  DVD+ LG GRRLTGTV  V G  + + TYS+LG K
Sbjct: 881  GDIERAVESLVAVSGSVHVGRAETVDVDVALGNGRRLTGTVGGVHGSVIANTTYSRLGPK 940

Query: 932  HLLQSWIPLLALAAGYPDRD--WLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYD 989
            H L +W  LLA+AA   D D  W AV  GR +         L  P+N  + L  LV + D
Sbjct: 941  HRLTAWAQLLAVAASDRDGDTEWTAVTTGRGSYSRPAWRSTLTAPENAAEELVRLVELRD 1000

Query: 990  AGRREPLPLPVKTSYAWAEARHCG---DDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDA 1046
            AG   PLP+    S A+AE R+ G   +D  + A   W S      DA   H+       
Sbjct: 1001 AGLHAPLPIATGASAAYAERRYGGSGMEDAIEAARKEWSS---DFGDARDRHI------- 1050

Query: 1047 WLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLLRAE 1083
                 +    PG +  G+   +  Y+ +LW PLL AE
Sbjct: 1051 ---TYVYGASPGIDVLGDAVTIENYARQLWAPLLTAE 1084


>tr|C3JUW8|C3JUW8_RHOER Tax_Id=596309 (recC)SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Rhodococcus erythropolis SK121]
          Length = 1093

 Score =  775 bits (2002), Expect = 0.0
 Identities = 476/1123 (42%), Positives = 612/1123 (54%), Gaps = 76/1123 (6%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG------- 57
            L L+RAER+                  FA E V VPAKGVERWL+QRLS++LG       
Sbjct: 2    LKLYRAERSDTLVSALATLLRTPLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPSAV 61

Query: 58   --VCAAVEFRNPRSLIAELTG-----TADDDPWSPDAMVWPLLGVIDESLDEPWCATLAT 110
              + A + F +P  L+AE        TADDDPWSP  +VW +L VIDESL EPWC  LA 
Sbjct: 62   DGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVLAK 121

Query: 111  HL-GHFEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDD 159
            HL GH         R+GRR+A A  +  LF SYA QRPQ+L+DW      DG    L +D
Sbjct: 122  HLEGH---------REGRRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSED 172

Query: 160  LAWQKALWQALCERIDADPPHIRHAKTLVQLHESPT--DLPQRLSLFGHTRLPATEVEXX 217
              WQ  LW  + ++ID   P  R  +    L E P   DLP+RLS+FG TRLP  +    
Sbjct: 173  FEWQARLWCIVADKIDVPGPAERLGQVSRALVEDPALVDLPERLSVFGPTRLPVDQRMIL 232

Query: 218  XXXXXXXXXXXXXPHPSDTLWQALSTRKGP-----LPRREDTSHRDVGHPLLATLGRDLR 272
                         PHPS  LW  +S+R  P     + R ED S     +PLL++L RD+R
Sbjct: 233  SALSANRDVHIWLPHPSPALWTKMSSRIPPRSESTIRRSEDGSALISANPLLSSLARDVR 292

Query: 273  EMQRLLPEPDTDEFR-GRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGP 331
            E+Q  L   + +         P +LL  +++D+ AD            D ++QVH+CHGP
Sbjct: 293  ELQISLGAAEFESVHLPEPAGPKSLLATVKADVIADRAPSVAAE---PDGTVQVHACHGP 349

Query: 332  SRQIDVLREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINL 391
            +RQ++VLRE LL L  DDPTL+PRD+LVMCPD+ETYAPL+ A FG G            +
Sbjct: 350  ARQVEVLRECLLRLFEDDPTLQPRDVLVMCPDVETYAPLVRAAFGQG------------V 397

Query: 392  SAHPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTD 451
              HP H LRVRLADR L Q+NP             GRATASEVL+LA + PVR RF + D
Sbjct: 398  HGHPGHLLRVRLADRGLRQSNPVLAVLGSLLELADGRATASEVLDLAATEPVRTRFSWGD 457

Query: 452  DDLDAITAWTREANIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGT 510
            D+L+ +  WT EA  RWG     R  +G++ F  NT+   +DR+L GV+  +  +AWL  
Sbjct: 458  DELERLREWTTEAGARWGIGSRQRATFGLDAFPQNTFNTAMDRILLGVSADESENAWLDL 517

Query: 511  TLPLDDVSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALA--LADED 568
             LPLDDV    ++L GRFA+FV++L  ++  L+G     EWL  L   +D L      + 
Sbjct: 518  ALPLDDVDGTDIDLTGRFAEFVDRLAVSLRDLAGPHSPAEWLRVLMRALDLLTDTAPADS 577

Query: 569  WPAAQMQREFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMR 628
            W +A   RE        G+T                  GRPTRANFRTG LTVCTMVPMR
Sbjct: 578  WQSAGAHRELVAAVEFGGETVLRLADVRAMLSRSLA--GRPTRANFRTGELTVCTMVPMR 635

Query: 629  SVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLV 688
            SVPHRVV L+GLDD VFPR G VDGDD L+RDP+ GERD+RSEDRQLLLDA+++A + L+
Sbjct: 636  SVPHRVVVLIGLDDEVFPRTGGVDGDDILSRDPVVGERDLRSEDRQLLLDAVMSAGEHLI 695

Query: 689  ITYTGANEYSGQARPPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVP 747
            + YTGA+  +G  RPPA+PL+ L+D L  T    A++ VLTRHPLQ FD RN       P
Sbjct: 696  LLYTGADPVTGVVRPPAIPLSGLLDVLSATVGPDAVNGVLTRHPLQSFDNRN-----FAP 750

Query: 748  DEPFTFDQTALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFR-A 806
             +PF+FD  AL  ARA++G     P   S                 NF   P +GF R  
Sbjct: 751  HKPFSFDTAALAGARAAAGTPIELPTVLSAELLEVHPKEVNLADLVNFLVHPARGFLRQR 810

Query: 807  LDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQL 866
            L   +P   + ++D +  ++D L  W +GDRML   L G + A  + AEWRRGTLPP  L
Sbjct: 811  LGVRVPELDDDIADSLATELDPLSTWALGDRMLLSRLAGRSSADFRAAEWRRGTLPPYNL 870

Query: 867  GWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYS 926
            G      +      +A  AL   D D +A DVDIDLG G RLTGTV+ V G+ +V  +YS
Sbjct: 871  GATVLGNVEWVVDQIAGLALPHFDGDSEAVDVDIDLGDGHRLTGTVTGVHGNSVVRASYS 930

Query: 927  KLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVA 986
             L  KH + +WI LLAL A        AV IGR    T      L  P N V++L  LV 
Sbjct: 931  SLAPKHRMTAWINLLALKAHGRPGPLDAVSIGRGRGKTAAARSVLDAPGNAVEILQQLVD 990

Query: 987  IYDAGRREPLPLPVKTSYAWAEARHCG---DDPEQKAGFRWRSGRYPGEDAEPAHVRAWG 1043
            + + G + PLP+   TS  +A  R  G   DD    A  +W +G+Y GE  +P++   +G
Sbjct: 991  LRERGLQRPLPMWAATSAEYARRRFGGESVDDATNGADTQW-TGQY-GEMIDPSNTYVFG 1048

Query: 1044 RDAWLRDLMQPLRPGEEF--EGETHRLGAYSSRLWLPLLRAER 1084
                L +L       +EF    E  R G  + RLW PLL  ER
Sbjct: 1049 EARTLAELAADPPSDDEFVWAEEPTRFGVLARRLWDPLLTNER 1091


>tr|C0ZQ87|C0ZQ87_RHOE4 Tax_Id=234621 (recC)SubName:
            Full=Exodeoxyribonuclease V gamma chain;
            EC=3.1.11.5;[Rhodococcus erythropolis]
          Length = 1093

 Score =  770 bits (1988), Expect = 0.0
 Identities = 474/1123 (42%), Positives = 610/1123 (54%), Gaps = 76/1123 (6%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG------- 57
            L L+RAER+                  FA E V VPAKGVERWL+QRLS++LG       
Sbjct: 2    LKLYRAERSDTLVSALATLLRTPLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPSAV 61

Query: 58   --VCAAVEFRNPRSLIAELTG-----TADDDPWSPDAMVWPLLGVIDESLDEPWCATLAT 110
              + A + F +P  L+AE        TADDDPWSP  +VW +L VIDESL EPWC  LA 
Sbjct: 62   DGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVLAK 121

Query: 111  HL-GHFEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDD 159
            HL GH         R+GRR+A A  +  LF SYA QRPQ+L+DW      DG    L +D
Sbjct: 122  HLEGH---------REGRRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSED 172

Query: 160  LAWQKALWQALCERIDADPPHIRHAKTLVQLHESPT--DLPQRLSLFGHTRLPATEVEXX 217
              WQ  LW  + ++ID   P  R  +    L E P   DLP+RLS+FG TRLP  +    
Sbjct: 173  FEWQARLWCIVADKIDVPGPAERLGQVSRALVEDPALVDLPERLSVFGPTRLPVDQRMIL 232

Query: 218  XXXXXXXXXXXXXPHPSDTLWQALSTRKGP-----LPRREDTSHRDVGHPLLATLGRDLR 272
                         PHPS  LW  +S+R  P     + R ED S     +PLL++L RD+R
Sbjct: 233  SALSANRDVHIWLPHPSPALWTKMSSRIPPRSESTIRRSEDGSALISANPLLSSLARDVR 292

Query: 273  EMQRLLPEPDTDEFR-GRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGP 331
            E+Q  L   + +         P +LL  +++D+ AD            D ++QVH+CHGP
Sbjct: 293  ELQISLGAAEFESVHLPEPAGPKSLLATVKADVIADRAPSVAAE---PDGTVQVHACHGP 349

Query: 332  SRQIDVLREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINL 391
            +RQ++VLRE LL L  DDPTL+PRD+LVMCPD+ETYAPL+ A FG G            +
Sbjct: 350  ARQVEVLRECLLRLFEDDPTLQPRDVLVMCPDVETYAPLVRAAFGQG------------V 397

Query: 392  SAHPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTD 451
              HP H LRVRLADR L QTNP             GRATASEVL+LA + PVR RF + +
Sbjct: 398  HGHPGHLLRVRLADRGLRQTNPVLAVLGSLLELADGRATASEVLDLAAADPVRTRFSWGE 457

Query: 452  DDLDAITAWTREANIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGT 510
            D+L+ +  WT EA  RWG     R  +G++ F  NT+   +DR+L GV+  +  +AWL  
Sbjct: 458  DELERLREWTTEAGARWGIGSRQRATFGLDAFPQNTFNTAMDRILLGVSADESENAWLDL 517

Query: 511  TLPLDDVSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALA--LADED 568
             LPLDDV    ++L GRFA+FV++L  ++  L+G     EWL  L   +D L      + 
Sbjct: 518  ALPLDDVDGTDIDLTGRFAEFVDRLAVSLRDLAGPHSPAEWLRVLMRALDLLTDTAPADS 577

Query: 569  WPAAQMQREFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMR 628
            W +A   RE        G+T                  GRPTRANFRTG LTVCTMVPMR
Sbjct: 578  WQSAGAHRELVAAVEFGGETMLRLADVRAMLSRSLA--GRPTRANFRTGELTVCTMVPMR 635

Query: 629  SVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLV 688
            SVPHRVV L+GLDD VFPR G VDGDD L+R P+ GERD+RSEDRQLLLDA+++A + L+
Sbjct: 636  SVPHRVVVLIGLDDEVFPRTGGVDGDDILSRHPVVGERDLRSEDRQLLLDAVMSAGEHLI 695

Query: 689  ITYTGANEYSGQARPPAVPLAELIDTLKITTEDSALD-VLTRHPLQPFDKRNVIPGALVP 747
            + YTGA+  +G  RPPA+PL+ L+D L  T    A++ VLTRHPLQ FD RN       P
Sbjct: 696  LLYTGADPVTGVVRPPAIPLSGLLDVLSATVGPEAINGVLTRHPLQSFDNRN-----FSP 750

Query: 748  DEPFTFDQTALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFR-A 806
            D+PF+FD  AL  ARA++G     P   S                 NF   P +GF R  
Sbjct: 751  DQPFSFDTAALAGARAAAGTPIELPTVLSAELLEVHPKEVNLADLVNFLVHPARGFLRQR 810

Query: 807  LDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQL 866
            L   +P   + ++D +  ++D L  W +GDRML   L G + A  + AEWRRGTLPP  L
Sbjct: 811  LGVRVPELDDDIADSLATELDPLSTWALGDRMLLSRLAGRSSADFRAAEWRRGTLPPYNL 870

Query: 867  GWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYS 926
            G      +      LA  AL   + D +A DVDIDLG G RLTGTV+ V G+ +V  +YS
Sbjct: 871  GASVLGNVEWVVDQLAGLALPHLEGDSEAVDVDIDLGDGHRLTGTVTGVHGNSVVRASYS 930

Query: 927  KLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVA 986
             L  KH + +WI LLAL A        AV IGR           L  P N  ++L  LV 
Sbjct: 931  SLAPKHRMTAWINLLALKAHGRPGALDAVSIGRGRGKIAAARSVLDAPGNAAEILQQLVD 990

Query: 987  IYDAGRREPLPLPVKTSYAWAEARHCG---DDPEQKAGFRWRSGRYPGEDAEPAHVRAWG 1043
            + + G + PLP+   TS  +A  R  G   DD    A  +W +G+Y GE  +P++   +G
Sbjct: 991  LRERGLQRPLPMWAATSAEYARRRFGGESVDDATNGADTQW-TGQY-GEMIDPSNAYVFG 1048

Query: 1044 RDAWLRDLMQPLRPGEEF--EGETHRLGAYSSRLWLPLLRAER 1084
                L +L       +EF    E  R G  + RLW PLL  ER
Sbjct: 1049 EARTLAELAADPPSDDEFVWAEEPTRFGVLARRLWDPLLTNER 1091


>tr|Q5YWP9|Q5YWP9_NOCFA Tax_Id=37329 (recC)SubName: Full=Putative RecC
            protein;[Nocardia farcinica]
          Length = 1112

 Score =  766 bits (1979), Expect = 0.0
 Identities = 488/1130 (43%), Positives = 608/1130 (53%), Gaps = 72/1130 (6%)

Query: 3    MALHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLS--------N 54
            M LH+ RAER                   FA E+V VPAKGVERWL+QRLS         
Sbjct: 1    MPLHIRRAERADILADALAARLAVPQPDPFAAEVVAVPAKGVERWLTQRLSAVLGVSAGG 60

Query: 55   RLGVCAAVEFRNPRSLIAEL----TGTA-DDDPWSPDAMVWPLLGVIDESLDEPWCATLA 109
            R GV A + F +P +L+AE     TG A +DDPW+   +VW LL VID ++ EPWCA LA
Sbjct: 61   RDGVAANIRFPSPAALVAEALAACTGIAPEDDPWAHQRVVWTLLRVIDRAVAEPWCAVLA 120

Query: 110  THLGHFEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDD 159
             HLG    G ++ +  GRRYA A +LA LF SYA QRP LL+DW      DG    +P D
Sbjct: 121  RHLGAPSRGRDHRI--GRRYATAAQLAALFDSYAAQRPALLLDWAAGGDGDGAGGEVPAD 178

Query: 160  LAWQKALWQALCERIDADPPHIRHAKTLVQLHESP--TDLPQRLSLFGHTRLPATEVEXX 217
            L WQ  LW+ L   I +  P  R A    +L   P   DLP+RLSLFG TRL   ++   
Sbjct: 179  LRWQPRLWRMLRAEIGSPSPAERLAPACERLRAEPGLLDLPERLSLFGVTRLTTDQLAVL 238

Query: 218  XXXXXXXXXXXXXPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQRL 277
                          HPS  LW AL+ R     R  DTS   V HPLL  L RD+RE+Q+ 
Sbjct: 239  DAVGAGREVDVWLVHPSPALWSALADRPPARARAADTSASAVRHPLLTGLARDVRELQQR 298

Query: 278  LPEPDTDEFRGRS--EYPD----TLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGP 331
            L      +    S  E P     +LL  +Q+ I  DA  P        D ++QVH+CHGP
Sbjct: 299  LAGTGAIDTGPLSAPEAPSPQQLSLLAGVQAGIRDDAWPPA---RLPADGTVQVHACHGP 355

Query: 332  SRQIDVLREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGL---GDVVPRTRGAH 388
            +RQ++VLR+ LLGL A DPTLEPRD+L+MCP++E YAPL+ A FG     D  P      
Sbjct: 356  ARQVEVLRDCLLGLFAADPTLEPRDVLIMCPEVEAYAPLVRAAFGARGGADEAPE----- 410

Query: 389  INLSAHPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFG 448
               SAHPAH LRVRLADR    TNP             GR T ++VL+LA S  VR R G
Sbjct: 411  ---SAHPAHLLRVRLADRGRGVTNPLLAVVQTLLELADGRVTVTQVLDLAASETVRRRCG 467

Query: 449  FTDDDLDAITAWTREANIRWGFDQEHRRPYGV-EFLHNTWRFGIDRVLAGVAMSDDSHAW 507
            F DD ++ +  W   A  RWG  Q  R+ +G+ +F  NT    +DR+L GV   +    W
Sbjct: 468  FDDDAIERLREWAAAAGARWGIGQRQRQAFGLADFAQNTLNGAVDRILLGVTADESGDDW 527

Query: 508  LGTTLPLDDVSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALA-- 565
            L   LPLDDV SN V+LAGRFA+FV++L   +  L G RP  EW   L   ++ L     
Sbjct: 528  LDLALPLDDVDSNDVDLAGRFAEFVDRLAVCLRDLRGPRPATEWAQVLGRALELLTDVPD 587

Query: 566  DEDWPAAQMQREFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMV 625
             + W   + + E A  T  AGD                    RPTRANFRTG LTVCTMV
Sbjct: 588  SQSWVRTEARAEIAAATEHAGDVPLRLADVAVLFADRLA--ARPTRANFRTGELTVCTMV 645

Query: 626  PMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQ 685
            PMRSVPHRVV L+GLDD VFPR G VDGDD LAR+P+ GERD RSEDRQLLLDA+LAA +
Sbjct: 646  PMRSVPHRVVVLLGLDDDVFPRTGGVDGDDVLAREPLLGERDPRSEDRQLLLDAVLAARE 705

Query: 686  TLVITYTGANEYSGQARPPAVPLAELIDTLKI-TTEDSALDVLTRHPLQPFDKRNVIPGA 744
             L+I +TGA+  +G  RPPA+P+AEL+D ++     D+   VLTRHPLQ FD+RN  P A
Sbjct: 706  RLLIFHTGADPVTGSPRPPAIPVAELLDVVRAHVGADAMAQVLTRHPLQSFDRRNFDPAA 765

Query: 745  LVPDEPFTFDQTALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGF- 803
                 PF+FD  AL  ARA++      P F                    F + PV+GF 
Sbjct: 766  -----PFSFDTVALAGARAAARVPEPAPPFLPEPLPPAERGDVALADLIAFAEHPVRGFL 820

Query: 804  FRALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPP 863
            ++ L   +P   E ++D +P+++D L +W +G+RML+  L G  PA  + AEWRRGTLPP
Sbjct: 821  WQRLGLRVPEHEEDLADALPIELDGLAKWELGERMLAARLTGADPAGLRAAEWRRGTLPP 880

Query: 864  GQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSV 923
             +LG      +      L   A        +A D+ +DLG GRRLTGTV  V G+ LV  
Sbjct: 881  FRLGGAVLDEIEHTVDTLVRVAQPDYAAAPRAVDIAVDLGDGRRLTGTVPEVRGETLVRT 940

Query: 924  TYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGR-PARGTTPRVEGLGGPDNP--VDL 980
            T+S++  KH + +W+ LLALAA   DR W AV  GR   R    R E L  PD P  V +
Sbjct: 941  TFSRVAAKHRIGAWVALLALAA-TEDRSWRAVTTGRGKFRRPAWRCE-LTAPDRPAAVAV 998

Query: 981  LADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQ--KAGFRWRSGRYPGEDAEPAH 1038
            L DLV + D G  EPLP+   +S A+AE R  G   E    A  R   G   G D    H
Sbjct: 999  LRDLVRLRDEGLTEPLPIAPASSAAYAERRVRGGSAEDAFAAAEREFDGGPNGPDKFGEH 1058

Query: 1039 V-----RAWGRDAWLRDLMQPLRPGEEFEGETHRLGAYSSRLWLPLLRAE 1083
                    WG    L  L     P     GE  R GA + RLW PLL AE
Sbjct: 1059 TDRHLRYVWGTAPRLDHLAAAPAPAGS-PGEPTRFGALAVRLWTPLLAAE 1107


>tr|D5PVW0|D5PVW0_COREQ Tax_Id=525370 (recC)SubName:
            Full=Exodeoxyribonuclease V gamma subunit;
            EC=3.1.11.5;[Rhodococcus equi ATCC 33707]
          Length = 1085

 Score =  760 bits (1963), Expect = 0.0
 Identities = 477/1110 (42%), Positives = 606/1110 (54%), Gaps = 62/1110 (5%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG------- 57
            L LHRAE                    F  E++ VPAKGVERWL+QRLS+ LG       
Sbjct: 2    LTLHRAESAGTLASALGQVLVTPLADPFEREVIAVPAKGVERWLTQRLSHVLGAGDSGHD 61

Query: 58   -VCAAVEFRNPRSLIAELTGTA-----DDDPWSPDAMVWPLLGVIDESLDEPWCATLATH 111
             V A ++F +P  LI +    A     DDDPW P  M+W LL VID+ L EPWC  LA H
Sbjct: 62   GVAANIDFPSPNRLIDQALAAATGYDVDDDPWHPSRMLWTLLQVIDDCLAEPWCTVLARH 121

Query: 112  LGHFEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG---LPDDLAW 162
            LGH   G + + R GRRY  A  LA LF +Y  QRP +LVDW      DG   L  DL W
Sbjct: 122  LGH---GAD-DHRAGRRYGTAAHLAELFRAYGSQRPAMLVDWAAGRDTDGTSPLDADLCW 177

Query: 163  QKALWQALCERIDADPPHIRHAKTLVQLHESPT--DLPQRLSLFGHTRLPATEVEXXXXX 220
            Q  LW+ L ERI +  P  R      +L + P   +LP+RLSLFG TRL A ++      
Sbjct: 178  QAQLWRRLRERIGSPSPAERLDAACARLRDEPALLELPERLSLFGPTRLGADQIAVLSAL 237

Query: 221  XXXXXXXXXXPHPSDTLWQALSTRKGPLPRREDTSHRDVGHPLLATLGRDLREMQ-RLLP 279
                      PHPS  +W  L+  + P  R +D    DV HPLLA+L RD+RE+Q RL  
Sbjct: 238  GANRDVHVWIPHPSIEMWGELADSEPPRRRADDVRALDVAHPLLASLARDVRELQSRLGA 297

Query: 280  EPDTDEFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVLR 339
                D        P TLLG LQSDIAAD  +P        D ++++HSCHGP+RQ++ LR
Sbjct: 298  IGMVDVHHPGPSRPATLLGQLQSDIAADR-QPSSWP---VDDTVEIHSCHGPARQVEALR 353

Query: 340  EVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKL 399
            E LL L   DPTLEPRD++VMCPD+ETYAPL+ A FG G   P T         HP H+L
Sbjct: 354  ERLLHLFQKDPTLEPRDVVVMCPDVETYAPLVRAAFGQGVQGPLT---------HPGHRL 404

Query: 400  RVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITA 459
            RVRLADRAL QTNP              R T S+VL+LA +APVR RF F DD+L+ +  
Sbjct: 405  RVRLADRALHQTNPVLGVVAALLDLADSRVTVSQVLDLAATAPVRRRFRFDDDNLERMRE 464

Query: 460  WTREANIRWGFDQEHRRPYGV-EFLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVS 518
            WT  A  RWG  +  R  +G+ +F  NT +  +DR+L G A  D    WL   LPLDDV 
Sbjct: 465  WTVAAGARWGIGRRERGAFGLGDFEQNTLKSALDRILLGAAADDADGEWLSLALPLDDVE 524

Query: 519  SNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALA-LADED-WPAAQMQR 576
            SN ++L GR A++V++L  ++  L+G +   +W  AL   +D L  +A+ D W   Q +R
Sbjct: 525  SNDIDLTGRLAEYVDRLDVSLRGLTGPQSAEQWSAALARALDLLVDVAEADAWQLGQARR 584

Query: 577  EFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVC 636
            E A      GDT                  GRPTRANFRTG LTVCTMVPMRSVPHRVV 
Sbjct: 585  ELAAAVEHGGDTLLRLADVRAMLRSRLA--GRPTRANFRTGELTVCTMVPMRSVPHRVVV 642

Query: 637  LVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANE 696
            L+GLDD VFPR   +DGDD LARDP+ GERD RSEDRQLLLDAI++A++ L++ YTGA+ 
Sbjct: 643  LLGLDDDVFPRGTGIDGDDVLARDPLLGERDPRSEDRQLLLDAIMSASERLLLFYTGADP 702

Query: 697  YSGQARPPAVPLAELIDTLKITTEDSALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQT 756
             +G ARPPAVPLAEL D L      +  DV+ RHPLQPFD RN  P       P +FD  
Sbjct: 703  VNGTARPPAVPLAELRDVLAAM---AGADVVQRHPLQPFDPRNFDPVG-----PRSFDHA 754

Query: 757  ALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFR-ALDYTLPWDV 815
            AL  ARA+       PAF                   +F ++P++GF R  L + +P   
Sbjct: 755  ALGGARAAQQPSVQAPAFLPEPLPPIEPGDVDLAELISFLENPIQGFLRQRLGFRVPDLD 814

Query: 816  EGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALR 875
            E V+D + +++D L  W +G+RML   L G  PAA + AEWRRGTLPP +LG      + 
Sbjct: 815  EDVADTLDLELDPLARWGIGERMLGARLAGADPAAFRAAEWRRGTLPPARLGDAALSDIE 874

Query: 876  DQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQ 935
                 LA  +        +A D+D+DL GGRRL GTV  V G+ +   T+S+L  KH + 
Sbjct: 875  WTVDSLARASAPVHAGPSEAVDIDVDL-GGRRLVGTVDGVHGEVIARTTFSRLAPKHRIG 933

Query: 936  SWIPLLALAAGYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREP 995
            +W+ LLA+ A     +  AV  GR +  T      L  P+N  ++L  LV + D G  EP
Sbjct: 934  AWVRLLAVTATGRPGNLTAVTTGRGSGRTPVMRSTLVAPENAAEILTRLVEMRDRGLAEP 993

Query: 996  LPLPVKTSYAWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVR-AWGRDAWLRDLM-Q 1053
            LP+   +S A+A+ R  G   E       R+      D +  HVR   G DA L  L  +
Sbjct: 994  LPMTAASSAAYADQRFRGRSIELALVAAERAWTGDFGDGKDRHVRYVHGPDAELSVLTDK 1053

Query: 1054 PLRPGEEFEGETHRLGAYSSRLWLPLLRAE 1083
            P  PG     E    G  ++ LW  LL AE
Sbjct: 1054 PAPPGAY---EPSCFGTEAAVLWGSLLAAE 1080


>tr|D5UHJ7|D5UHJ7_9CELL Tax_Id=446466 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Cellulomonas flavigena DSM 20109]
          Length = 1128

 Score =  706 bits (1823), Expect = 0.0
 Identities = 443/1106 (40%), Positives = 584/1106 (52%), Gaps = 64/1106 (5%)

Query: 32   FATELVLVPAKGVERWLSQRLSNRLG--------VCAAVEFRNP----RSLIAELTGTA- 78
            FA E+V VP +GVERW++QRLS+RLG        VCA ++  +P    R  +A  TGT+ 
Sbjct: 28   FAREVVAVPTRGVERWVAQRLSHRLGAGSAGEAGVCARIDMGSPTRLVRDAVAAATGTSR 87

Query: 79   DDDPWSPDAMVWPLLGVIDESLDE--PWCATLATHLGHFEMGEEYELRQGRRYAVARRLA 136
            DDDPW P+ +VW +L  +DE++    PW   LA H+     G   ++R GRR  +A+RLA
Sbjct: 88   DDDPWEPERLVWHVLQAVDEAVAAGLPWAEPLARHVQD-PPGARDDVRAGRRLRLAQRLA 146

Query: 137  GLFASYARQRPQLLVDW----------DGLPDDLAWQKALWQALCERIDADPPHIRHAKT 186
              FA+YA QRP L+++W          D LP D+AWQ  LW+A+   +    P    A+ 
Sbjct: 147  AGFAAYAAQRPSLVMEWAAGRDDDGAGDPLPTDVAWQAPLWRAVRAAVGTPSPAELLAEA 206

Query: 187  LVQLHESP--TDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXXPHPSDTLWQALSTR 244
               L   P   DLP RLS+ G TRLP   VE               PHPS  LW+  +  
Sbjct: 207  TRALRADPDLVDLPTRLSVLGPTRLPQAHVEVLTALAAHRDVHVWLPHPSRALWERTAAT 266

Query: 245  KGPL--------PRREDTSHRDVGHPLLATLGRDLREMQRLLPEPDTDEFRGRSEYPD-T 295
             G          PRR D       HPLLA+  RD  E+   L     D     +  P  T
Sbjct: 267  AGRADVGGPTVAPRRRDVP-APARHPLLASTARDTTELALRLTATGADVTHHPAPAPPPT 325

Query: 296  LLGWLQSDIAADAVRPQGRHHRRE-DRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEP 354
            +LG LQ+ + AD  RP  R      DR++QVH+CHG  RQ++VLRE +LGLLADDPTL+P
Sbjct: 326  VLGALQAALRADE-RPAARAVAAPGDRTVQVHACHGRGRQVEVLREAVLGLLADDPTLQP 384

Query: 355  RDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPX 414
            RD++V+CPD+E +APL+ A FG        R      + HP   LRVR+ADRA  +TNP 
Sbjct: 385  RDVVVLCPDVEAFAPLVAAAFGAPAEDEADRA-----TVHPGRTLRVRVADRAPARTNPL 439

Query: 415  XXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEH 474
                       G R TAS V++LA    VR RFGF D   + + AW  E+ +RWG DQ+ 
Sbjct: 440  LRVLVALLDLAGSRVTASGVVDLAGLPAVRRRFGFDDAAAERLRAWALESGVRWGEDQDR 499

Query: 475  RRPYGVEFL-HNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVE 533
            R  YG+  +   TWR G DR+L GVAM+++ H ++G+ LPLDDV S  V+LAGRFA+ V+
Sbjct: 500  RARYGLGRVPQGTWRTGTDRLLLGVAMAEEDHRYVGSALPLDDVDSTDVDLAGRFAELVD 559

Query: 534  KLRRTVDQLSGTRPLHEWLDALTAGIDALALAD--EDWPAAQMQREFAEITARAGDTATS 591
            ++   +D+L G RP   W DAL   +  L  AD  + W     +   A+  A A      
Sbjct: 560  RVTGLLDELDGARPASAWFDALERALVLLTAADPTDAWQEVGARAVLADARASAAGADVP 619

Query: 592  XXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAV 651
                           GRPTRA FRTG LTVC++ PMR+VPHRVVCL+GLDDG FPR GA 
Sbjct: 620  LRLPDVVALLEPRLGGRPTRAGFRTGALTVCSLEPMRAVPHRVVCLLGLDDGAFPRAGAP 679

Query: 652  DGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAEL 711
            DGDD LARDP+ GERD R+EDRQL LDA+ AA   LV+ ++GA+E +G  RPPAVP+ EL
Sbjct: 680  DGDDVLARDPLVGERDRRAEDRQLFLDAVTAAGDHLVVVHSGADERTGAPRPPAVPVGEL 739

Query: 712  IDTLKITT-----EDSALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSG 766
            +D +           S   ++  HPLQ  D+RN  PGAL    PF+FD     AA  + G
Sbjct: 740  LDAVDEAVAFADGRTSRGALVVHHPLQTVDERNFAPGALGRPGPFSFDVVDRDAATVARG 799

Query: 767  ERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFF-RALDYTLPWDVEGVSDVMPVD 825
             R  RP   +                    + PV+ F  R L   +P +V+ + D +P+ 
Sbjct: 800  PRHPRPPLLTAPLPPLDDPVVDLDDLVAALEHPVRAFVRRRLGVLVPGEVDDLDDRLPLT 859

Query: 826  IDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEA 885
            +  L+ W  GDR+L+ +L G+    A  AE RRG +PPG LG      +  + A +A  A
Sbjct: 860  LAPLDGWAAGDRLLAAVLDGVDLTRAAAAERRRGRVPPGNLGGAALADVATRVAAVAEAA 919

Query: 886  LGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAA 945
                       DV + L G R LTGTV  V GD LV   Y++LG KH L++W+ LLALAA
Sbjct: 920  APVLGAPATTVDVTVPLPGDRTLTGTVPGVHGDVLVRAVYARLGAKHRLRAWVRLLALAA 979

Query: 946  ---GYPDRDWLAVCIGR-PARGTTPRVEGL--GGPDNPVDLLADLVAIYDAGRREPLPLP 999
               G P R   A  +GR P    T     L    PD+   LLA+LV + D     PLPLP
Sbjct: 980  DPDGPPVRG--AATVGRGPGTRPTAATSWLTPPEPDDARRLLAELVTVRDRALCAPLPLP 1037

Query: 1000 VKTSYAWAEARHCGDDPEQKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLRDLMQPLRPGE 1059
            V  +  +A  RH  DDP        ++ R   E  +  HV AWG    L  +     P +
Sbjct: 1038 VAAAGTYAHRRHGNDDPAGALADAEQALRDRYEHTDEYHVLAWGDGFTLAAVAGEPTPAD 1097

Query: 1060 E--FEGETHRLGAYSSRLWLPLLRAE 1083
               +  E   LGA +  +W  LL  E
Sbjct: 1098 RAAWPDEPTLLGALARTVWDALLTRE 1123


>tr|D0L8X4|D0L8X4_GORB4 Tax_Id=526226 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Gordonia bronchialis]
          Length = 1151

 Score =  669 bits (1725), Expect = 0.0
 Identities = 430/1117 (38%), Positives = 571/1117 (51%), Gaps = 95/1117 (8%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG------- 57
            LHLHRAERT                   + E+V VPA GVERWL Q L+ R+G       
Sbjct: 2    LHLHRAERTDTLADALADLLATPLDDPMSPEIVAVPAAGVERWLQQHLATRIGCGTTRSD 61

Query: 58   -VCAAVEFRNPRSLIAELT---------------------GTADDDPWSPDAMVWPLLGV 95
             + A +EF +P +L   +T                     G   DDPW P  +VW +L V
Sbjct: 62   GIAANIEFLSPAALADAVTAALLTEAAGTDTANAGHEHSAGGGADDPWRPSVLVWSVLRV 121

Query: 96   IDESLDEPWCATLATHLGHFEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW-- 153
            +D+ +D+P  A +A H+G    G+E   R GRR+A AR LA LF  Y R RP +L  W  
Sbjct: 122  LDDRIDDPELAMIARHVGG---GDETSPRIGRRFATARHLADLFERYGRARPTMLAAWAQ 178

Query: 154  ----DG----LPDDLAWQKALWQALCERIDADPPHIRHAKTLVQLHESP--TDLPQRLSL 203
                DG    +  DL+WQ   W+AL   +    P         +L  +P  TDLP+RLS+
Sbjct: 179  GRDEDGAGGHIGADLSWQPGFWRALRAEVGRPHPAEALGDLCARLRANPAVTDLPERLSV 238

Query: 204  FGHTRLPATEVEXXXXXXXXXXXXXXXPHPSDTLWQALST--------RKGPLPRREDTS 255
            FG TR+                     PHPS  LW+A+S+         +   PRR D  
Sbjct: 239  FGPTRVTEEFRALLVALARHRDVHVFLPHPSPVLWEAISSSTVAGDRPEETHSPRRADRR 298

Query: 256  HRDVGHPLLATLGRDLREMQ-RLLPEPDTD-EFRGRSEYPDTLLGWLQSDIAADAVRPQG 313
               + HPLLA+L RD++E++ RL P  D D        +  TLLG L + + AD +R Q 
Sbjct: 299  LPAIAHPLLASLSRDVQELELRLQPHADVDVHHESVLGHRPTLLGALHAGLCADDLRQQA 358

Query: 314  RHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVMCPDIETYAPLITA 373
                  D S+++H+CHGP RQ++VLR+ LL L ADDPTL+PRD+L+MCPD+ET+APLI  
Sbjct: 359  VP---ADSSVEIHACHGPERQVEVLRDRLLHLFADDPTLQPRDVLIMCPDVETFAPLIRG 415

Query: 374  GFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASE 433
             FG   +            AHPA  LRVRLADR + Q NP             GR +A E
Sbjct: 416  AFGQAGL------------AHPAFALRVRLADRGVRQVNPILDVVGAVVELAAGRVSAGE 463

Query: 434  VLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGVE-FLHNTWRFGID 492
            V +L    PVR RF  TDDDLD +  W   +N+RWG     R  +G++ F   T+  G+D
Sbjct: 464  VADLLGLEPVRTRFDLTDDDLDRVRDWLAGSNVRWGIGLGQRARFGLDGFGQGTFEAGLD 523

Query: 493  RVLAGVAMSDDSHAWLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWL 552
            R+L GV   +    WLGT LPL  V S  ++LAGRFA+F+ +L  T++ L+ T P   W 
Sbjct: 524  RILLGVVAEEQDGEWLGTALPLAGVESTEIDLAGRFAEFLARLSTTLEALTETGPRDRWR 583

Query: 553  DALTAGIDALALAD--EDWPAAQMQREFAEITARAGDTA-TSXXXXXXXXXXXXXXXGRP 609
            DALT  +DAL      +DW  AQ  R   +    +G    T                GRP
Sbjct: 584  DALTGVVDALTATSPGDDWQRAQAIRLITDAFGESGPAEPTVLRLADVRDLMAALLAGRP 643

Query: 610  TRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIR 669
            TR+NFRTG LTVCTMVPMRSVPHRV+ L+G+D  VFPR+  +DGDD L  DP+ GER+ R
Sbjct: 644  TRSNFRTGELTVCTMVPMRSVPHRVIVLLGIDGEVFPRVQRIDGDDLLGVDPLVGERNPR 703

Query: 670  SEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTED-----SAL 724
             EDRQ  LDAI AAT+TL++ Y+GA+  SG+  PPAV ++EL DTL+   +      +A+
Sbjct: 704  DEDRQCFLDAICAATETLLVFYSGADPVSGRRIPPAVVVSELADTLRTLIDPARSPAAAV 763

Query: 725  DVLTRHPLQPFDKRNVIPGALV-PDEPFTFDQTALVAARA----SSGERAMRPAFFSXXX 779
            D +  H L  FD+RN + G +     PF+ D   L  ARA    ++    M         
Sbjct: 764  DPVRHHTLHGFDQRNFLDGGVAGVAGPFSHDAELLDGARAMRTPATTAVPMAARSVPVDD 823

Query: 780  XXXXXXXXXXXXXXNFFKDPVKGFFR-ALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRM 838
                           F  DP+ G+ R  L   +P       D + VD+D LE W +G+R 
Sbjct: 824  DPDEAGDIDLDLLIEFHTDPIAGYLRQRLGARIPRAESAHDDQLDVDLDPLESWGIGERF 883

Query: 839  LSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIALRDQCALLAAEALGFRDTDGQAYDV 898
            L  +L G +    Q AE RRGTLPP   G R   ++      L       RD      DV
Sbjct: 884  LKRMLGGASIEECQAAELRRGTLPPFAFGTRTLASISTVAQNLYRNVAVLRDGSPAMLDV 943

Query: 899  DIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLA---- 954
            D+ L  GRRL GTV  VFG R V+ TYS+L  K  L  WI ++A+AA     + +A    
Sbjct: 944  DVTLPDGRRLYGTVPNVFGQRFVTATYSRLKAKQQLTEWIRIVAVAAAADQGNPVAGRVD 1003

Query: 955  --VCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHC 1012
              V +GR ARG        G PD+   +L DL+ I DAG  +PLPLP + + A+A+    
Sbjct: 1004 SGVVVGRAARGAGAARVTFGRPDDAARILHDLIRIRDAGLEQPLPLPAEAAAAFAQHDAG 1063

Query: 1013 GDDPEQKA--GFRWRSGRYPGEDAEPAHVR-AWGRDA 1046
            G  P+       R  SG++ G   +P HVR  +G DA
Sbjct: 1064 GRRPDWGLVNARRSFSGKF-GAHLQP-HVRLVFGGDA 1098


>tr|D3FF73|D3FF73_CONWI Tax_Id=469383 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Conexibacter woesei]
          Length = 1143

 Score =  663 bits (1711), Expect = 0.0
 Identities = 441/1150 (38%), Positives = 595/1150 (51%), Gaps = 84/1150 (7%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG------- 57
            LH+H A+                    FA E+V VP +GVERWL+QRLS RLG       
Sbjct: 2    LHVHHADGADRLVAALAEVLTVRLADPFAAEVVAVPTRGVERWLAQRLSGRLGTSPGAGD 61

Query: 58   -VCAAVEFRNPRSLIAELTGTADD-----DPWSPDAMVWPLLGVIDESLDEPWCATLATH 111
             +CA V F  PR ++ E    A       DPW P+  +WPLL ++D + DE W   L  H
Sbjct: 62   GICANVAFPTPRRVVEEAIAAASGLDAATDPWRPERALWPLLELVDAASDEAWLGRLTAH 121

Query: 112  LGHFEMGEEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDDLA 161
            L     G+     + RR +  R +A LFA YA  RP +L  W      DG    L  +  
Sbjct: 122  LDR-AAGD-----RSRRLSAVRHVATLFARYALHRPAMLRAWAAGSDEDGAGGALDAEHR 175

Query: 162  WQKALWQALCERIDADPPHIRHAKTLVQLHESP--TDLPQRLSLFGHTRLPATEVEXXXX 219
            WQ  LW+ L ER+    P         +L E P  +DLP+R+SLFG T LPA +++    
Sbjct: 176  WQAELWRRLRERVGVPGPAELLDLGRARLVEDPGLSDLPERISLFGLTSLPARDLQLLRA 235

Query: 220  XXXXXXXXXXXPHPSDTLWQALSTR--KGP-LPRREDTSHRDVGHPLLATLGRDLREMQR 276
                         PS   W+ ++    +GP L R +  S     HPLLA+ GRD RE+Q 
Sbjct: 236  LAERRDVHLFLLMPSPAAWRGIADAAGRGPILTRGQALSAALPAHPLLASWGRDGRELQL 295

Query: 277  LLPEPDTDEFR----GRSEYPDTLLGWLQSDIAADAVRPQGRHHRRED--RSIQVHSCHG 330
            LL    T+       G  + PDTLL  +Q+DI AD    +    +  D   S+QVH CHG
Sbjct: 296  LLEPLPTEAVHADAIGAGDEPDTLLARVQADIRADRTPREDEPVQLGDGDASVQVHVCHG 355

Query: 331  PSRQIDVLREVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLG--DVVPRTRGAH 388
             +RQ++VLR+ +L  LADDP+LEPRD++VMCPDIET+APL+ A FG G  DV        
Sbjct: 356  RARQVEVLRDAILHALADDPSLEPRDVIVMCPDIETFAPLVEATFGAGEADVGEALADDA 415

Query: 389  INLS-AHPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARF 447
            ++LS AHPA +LRVRLADR+L QTNP              R TASE+L+L +  PVR RF
Sbjct: 416  VDLSGAHPA-ELRVRLADRSLRQTNPVLGVVTKLLELATARVTASELLDLVDREPVRRRF 474

Query: 448  GFTDDDLDAITAWTREANIRWGFDQEHRRPYGVEFL-HNTWRFGIDRVLAGVAMSDDSHA 506
               +D+L  +  W   + IRWG D  HR P+ ++ +   TW  G+DR+L GVAM++    
Sbjct: 475  RLEEDELARVEDWVAASGIRWGLDAAHRAPFRLQHVPQGTWAAGLDRLLTGVAMAERPGH 534

Query: 507  WLGTTLPLDDVSSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALAD 566
             L   LPLDDV S+ ++LAGRFA+ +++L   +D+L+  +P+  W  A+    D +    
Sbjct: 535  TLAGVLPLDDVDSSAIDLAGRFAELLDRLAAALDELAAPKPISAWATAIAEAADTMTATT 594

Query: 567  --EDWPAAQMQREFAEITARAGD----TATSXXXXXXXXXXXXXXXGRPTRANFRTGTLT 620
              + W  A++Q+  A++   A +    +A S               GRPTR NFRTG LT
Sbjct: 595  PRDAWQRAELQQLLADVVEEATNDGVASAVSLDVADVAALLGGRLAGRPTRTNFRTGHLT 654

Query: 621  VCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAI 680
            VCT+ PMRSVPHRV+CL+GLDD VFPR    DGDD L  +P  G+RD RSEDRQ+LLDA+
Sbjct: 655  VCTLQPMRSVPHRVICLLGLDDDVFPRRSPRDGDDVLLDEPWIGDRDGRSEDRQILLDAL 714

Query: 681  LAATQTLVITYTGANEYSGQARPPAVPLAELIDTLKITTEDSALD-------VLTRHPLQ 733
            +AA   L++TY+G +E +   R PAVP+ EL+D +  T    A D       VL RHPLQ
Sbjct: 715  MAAGDRLIVTYSGRSERTNAERAPAVPIGELLDVIDRTA--CAADGGRARDAVLVRHPLQ 772

Query: 734  PFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXX 793
            PFD  N  P  LVP   ++FD   L  ARA  GER  RP F                   
Sbjct: 773  PFDAANFAPSTLVPQRAWSFDGVTLEGARALGGERGSRPPFLPRPLQPQDADVIELDQLL 832

Query: 794  NFFKDPVKGFFR-ALDYTLPWDVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQ 852
             F   PV+ F R  L   +       SD +P+++D L  W +G R+L+    G+    A 
Sbjct: 833  AFVGHPVRAFLRQRLGVGVDVGAGERSDSLPIELDPLARWGLGARLLAARRAGVDVGVAV 892

Query: 853  QAEWRRGTLPPGQLG---WRRAIALRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLT 909
              E  RG++PPG LG    R  +A  +     AAE +G      +  DV I L  GR L 
Sbjct: 893  ADERARGSVPPGALGDQVLRGVVAEVEAILGAAAETVG-AGGPLRTLDVRIALEDGRTLA 951

Query: 910  GTVSPVFGDRLVSVTYSKLGGKHLLQSWIPLLALAAGYPDRDWLAVCIGRPARG-----T 964
            GT+  V    L  VTYS++  +  ++SW+ LLAL A +P+R  +A  +GR  R      T
Sbjct: 952  GTIGGVGQYVLPVVTYSRVDPRRRMESWVRLLALTAAFPERSLVATTVGRARRDVDRATT 1011

Query: 965  TPRVEGLGG-PD----NPVDLLADLVAIYDAGRREPLPLPVKTSYAWAEARHCGDDPEQK 1019
              R+   GG PD         LA +V +YD G REPLPL  +TS A+A     G     +
Sbjct: 1012 IARIAQPGGEPDVRRTRAHAELARIVDLYDRGMREPLPLFRQTSAAYAAG---GATAVAR 1068

Query: 1020 AGFRWRSGRYP-GEDAEPAHVRAWGR----DAWLRDLMQPLRPGEEFE-GETHRLGAYSS 1073
            A   W +   P  ED +P H   +G     +  L +  +    GE+++  E  R G Y+ 
Sbjct: 1069 AHTAWETDFQPLREDLDPEHQLVFGGTLPFERLLAEAPRDDEQGEDWDMSEPSRFGRYAR 1128

Query: 1074 RLWLPLLRAE 1083
            RLW  LL  E
Sbjct: 1129 RLWSGLLAHE 1138


>tr|D5UQD3|D5UQD3_TSUPA Tax_Id=521096 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;
            EC=3.1.11.5;[Tsukamurella paurometabola DSM 20162]
          Length = 1103

 Score =  651 bits (1680), Expect = 0.0
 Identities = 432/1114 (38%), Positives = 560/1114 (50%), Gaps = 50/1114 (4%)

Query: 5    LHLHRAERTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLGVCAAVEF 64
            L +HR+ER                   FA E+V VPA+GVERW++Q L+ RLG+ A ++F
Sbjct: 2    LTVHRSERGDVLVDALAEVLATPGADPFAAEVVAVPARGVERWITQSLAARLGIAANIDF 61

Query: 65   RNPRSLIAELTGTA-----DDDPWSPDAMVWPLLGVIDESLDEPWCATLATHLGHFEMG- 118
              P +L+A     A     DDDPW  + +VW +L  +DE   EP    LA HLG    G 
Sbjct: 62   PTPDALVAAAVAAASGIALDDDPWRGERLVWLVLAAVDELAFEPGGEVLARHLGVTRPGG 121

Query: 119  --EEYELRQGRRYAVARRLAGLFASYARQRPQLLVDW------DG----LPDDLAWQKAL 166
              E+   R  RRY  A  LAGL  SY   RP +LVDW      DG    LP DL WQ  L
Sbjct: 122  WAEQPGHRPRRRYPTADMLAGLLRSYGANRPGMLVDWTAGRETDGTGGALPADLRWQAEL 181

Query: 167  WQALCERIDADPPHIRHAKTLVQLHESPT--DLPQRLSLFGHTRLPATEVEXXXXXXXXX 224
            ++ + +      P  R      +L + P    LP R S++G TRLPA +           
Sbjct: 182  FRRVRDLAGVPSPAERLDAACARLRDEPALVALPSRFSVYGPTRLPADQATVFAALAAHR 241

Query: 225  XXXXXXPHPSDTLWQALSTRKGP-----LPRREDTSHRDVGHPLLATLGRDLREMQ-RLL 278
                  PHPS  LW A   R        +PR    +     +PLLA+LGR+  E+Q R+ 
Sbjct: 242  DVHLWLPHPSPALWAASRERPSAAVGAAVPRVPGAT---ATNPLLASLGREASELQERVS 298

Query: 279  PEPDTDEFRGRSEYPDTLLGWLQSDIAADAVRPQGRHHRREDRSIQVHSCHGPSRQIDVL 338
            P    D        P TLLG LQ+ +A DA  P G      D +++ H+CHG +R I+VL
Sbjct: 299  PVAGADVHHPAPARPGTLLGRLQAAVAGDAPLPAGT--AEPDGTVEFHACHGAARMIEVL 356

Query: 339  REVLLGLLADDPTLEPRDILVMCPDIETYAPLITAGFGLGDVVPRTRGAHINLSAHPAHK 398
            RE L+ L  DDPTL+PR++LV CPDIE+YAPLI + FG    V            HP  +
Sbjct: 357  RERLVRLFEDDPTLQPREVLVTCPDIESYAPLIRSAFG--QAVSGAGAVESGDPVHPGQR 414

Query: 399  LRVRLADRALVQTNPXXXXXXXXXXXXGGRATASEVLNLAESAPVRARFGFTDDDLDAIT 458
            LRVRLADR+L   NP             GRAT ++VL+LA + PVR RF F+D D++ + 
Sbjct: 415  LRVRLADRSLRFANPLLDALVTVLELADGRATVAQVLDLAATDPVRRRFRFSDSDIERLR 474

Query: 459  AWTREANIRWGFDQEHRRPYGVE-FLHNTWRFGIDRVLAGVAMSDDSHAWLGTTLPLDDV 517
             W   +  RWG D   R  +G+  F  NT    +DR++ GVA  +    WLG  LPLDDV
Sbjct: 475  EWAGPSGARWGLDASGRERFGLGGFPQNTLATALDRIVLGVAADETESQWLGLGLPLDDV 534

Query: 518  SSNRVELAGRFADFVEKLRRTVDQLSGTRPLHEWLDALTAGIDALALA--DEDWPAAQMQ 575
             S  ++L GRFAD+++ L R      G R    W ++L A   A+A     E W   Q  
Sbjct: 535  DSTDIDLVGRFADYLDVLTRATADSRGRRTAQAWAESLNALALAVAAVAPSEGWQVTQAG 594

Query: 576  REFAEITARAGDTATSXXXXXXXXXXXXXXXGRPTRANFRTGTLTVCTMVPMRSVPHRVV 635
            RE A  TA  G                     +PTRANFRTG LTVCT+VPMRSVPHRVV
Sbjct: 595  REIA--TALRGGGDRDLTLPEVRAMLASRLAAKPTRANFRTGELTVCTLVPMRSVPHRVV 652

Query: 636  CLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGAN 695
             L+GLDD VFPR     GDD L R P  GERD R+EDRQL LDA+ +AT  L++ YTGA+
Sbjct: 653  VLLGLDDEVFPRSTRYSGDDVLGRTPCVGERDPRAEDRQLFLDAVTSATDRLLVFYTGAD 712

Query: 696  EYSGQARPPAVPLAELID-TLKITTEDSALDVLTRHPLQPFDKRNVIPGALVPDEPFTFD 754
               G  RPPAVP+AEL D T  + T+     +  RH LQPFD  N  P       PF+FD
Sbjct: 713  PVKGTPRPPAVPVAELRDATRALLTDSDTTGLEFRHSLQPFDSDNFDPDRFGLTVPFSFD 772

Query: 755  QTALVAARASSGERAMRPAFFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFR-ALDYTLPW 813
              A   A A+ G     PA F                   F + PVK F R  L +T+P 
Sbjct: 773  PAAYAGAVAAGG-TPEPPAPFLDGPLAAVIEDVDLESLLRFCEHPVKAFLRQRLGFTVPD 831

Query: 814  DVEGVSDVMPVDIDALEEWTVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLGWRRAIA 873
              E +++ + +  D L+ W +GDRML+  L G+       AE RRGTLPP  LG     A
Sbjct: 832  QDEELAEALTIAPDGLQRWDIGDRMLASALAGVESDRFAAAEMRRGTLPPFALGSAVLDA 891

Query: 874  LRDQCALLAAEALGFRDTDGQAYDVDIDLGGGRRLTGTVSPVFGDRLVSVTYSKLGGKHL 933
            +    A L+              D+ +DLG GRRL G+V  V+   +V  ++S+L  KH 
Sbjct: 892  IAGTVAELSRVVSPHLTGPATTVDIAVDLGAGRRLVGSVPSVYPGGIVRSSFSRLAPKHR 951

Query: 934  LQSWIPLLALAA-GYPDRDWLAVCIGRPARGTTPRVEGLGGPDNPVDLLADLVAIYDAGR 992
            + +W+ LLALAA G+ +R  +A+  GR     T R   L  P +PV  L  LV + D G 
Sbjct: 952  VAAWVSLLALAAGGHSERSAVAIGRGRFRGVLTSR---LTVPADPVAELRALVDLRDRGL 1008

Query: 993  REPLPLPVKTSYAWAEARHCGDDPE---QKAGFRWRSGRYPGEDAEPAHVRAWGRDAWLR 1049
             EPLPL    S  +AE    GD  +     A   + SG   G+D    +  A G  A+  
Sbjct: 1009 TEPLPLFPSASAVYAERGIAGDSQQMALDAARGEFESGFGDGKDRSIRY--ALGESAFDD 1066

Query: 1050 DLMQPLRPGEEFEGETHRLGAYSSRLWLPLLRAE 1083
             L  P     EF     R GA ++RLW+PLL  E
Sbjct: 1067 ALGPPRGSEAEFSRAGTRFGALAARLWVPLLTHE 1100


>tr|A6W6P1|A6W6P1_KINRD Tax_Id=266940 SubName:
            Full=Exodeoxyribonuclease V, gamma subunit;[Kineococcus
            radiotolerans]
          Length = 1158

 Score =  627 bits (1618), Expect = e-177
 Identities = 433/1173 (36%), Positives = 582/1173 (49%), Gaps = 113/1173 (9%)

Query: 5    LHLHRAE--RTXXXXXXXXXXXXXXXXXXFATELVLVPAKGVERWLSQRLSNRLG----- 57
            LH+HR+E   T                  FA +++ V A+G ERW++QRLS+ LG     
Sbjct: 2    LHVHRSESANTLVTALAGLLRDPAPGADPFAPDVLAVGARGTERWIAQRLSHHLGAGDPA 61

Query: 58   -------VCAAVEFRNPRSLIAELT---------GTADD-DPWSPDAMVWPLLGVIDESL 100
                   +CA V+  +P  L+  +          GT D  + W+P ++ W +L V+DE  
Sbjct: 62   AGGGDDGICARVDTSSPAHLLDGVLAAALERTRPGTGDAVERWAPSSLTWDVLEVLDEIA 121

Query: 101  D---------EPWCATLATHLGHFEMGEEYELRQG-------RRYAVARRLAGLFASYAR 144
                       P  A L  HL H   G++     G       RR A A R+AGLFA Y  
Sbjct: 122  PADGGPAPDGRPEFALLRHHLRHHP-GDDGPGGPGGPGTPPVRRTAAAARVAGLFARYGA 180

Query: 145  QRPQLLVDWDG---------LPDDLAWQKALWQALCERIDADPPHIRHAKTLVQLHESP- 194
             RPQLL DW           LP DL WQ  +++A+ ER+    P          L   P 
Sbjct: 181  ARPQLLADWAAGRDDAPGAPLPADLRWQPEVFRAVRERVGLPAPAELLDDACAALRTDPA 240

Query: 195  -TDLPQRLSLFGHTRLPATEVEXXXXXXXXXXXXXXXPHPSDTLWQALST--RKGPLPRR 251
             +DL  RL++F  TRL  + +                 HPS  LW A +   R  P PRR
Sbjct: 241  LSDLGPRLAVFLVTRLATSRLRVLSALAEHREVHLLLQHPSPALWDATAAALRTDPGPRR 300

Query: 252  ED-TSHRDVGHPLLATLGRDLREMQRLLPEP---DTDEFRGRSEYPDTLLGWLQSDIAAD 307
                +H    HPLL ++ RD+RE+Q  L       TD      E   TLLG LQ+ +A D
Sbjct: 301  AAWAAHAPGRHPLLRSMARDVRELQVRLAHAAPGHTDVHHPAPEPAPTLLGTLQAALARD 360

Query: 308  AVRPQGRHHRREDRSIQVHSCHGPSRQIDVLREVLLGLLADDPTLEPRDILVMCPDIETY 367
            A    G      DRS+QVH+CHG +RQ++VLREV+LGLL  DPTL+PRD+LV CPD+ET+
Sbjct: 361  AEPAPGPDPG--DRSVQVHACHGRARQVEVLREVVLGLLDADPTLQPRDVLVACPDVETF 418

Query: 368  APLITAGFGLGDVVPRTRGAHINLSAHPAHKLRVRLADRALVQTNPXXXXXXXXXXXXGG 427
            APL++A F                 +HP   LRV++ADR+ ++TNP              
Sbjct: 419  APLVSAAFAT--------------DSHPGGGLRVQVADRSALRTNPLLGLAVRLLGLAQS 464

Query: 428  RATASEVLNLAESAPVRARFGFTDDDLDAITAWTREANIRWGFDQEHRRPYGVEFL-HNT 486
            RA A+EVL+LA +APVR RF   D+DL+ +  WT  A + WG    HR  + +  L   T
Sbjct: 465  RAGATEVLDLAAAAPVRRRFDLDDEDLEQLREWTVAAGVHWGLSARHRGAWQLGSLDQGT 524

Query: 487  WRFGIDRVLAGVAMS----DD------SHAWLGTTLPLDDVSSNRVELAGRFADFVEKLR 536
            WR G+DR+L GVA+     DD          LG  +PL DV S+R++LAGRFA+ +++L 
Sbjct: 525  WRAGLDRLLVGVAVGGAVEDDLVGRTGEDGLLGAVVPLADVESSRIDLAGRFAELLDRLD 584

Query: 537  RTVDQLSGTRPLHEWLDALT-AGIDALALADED-WPAAQMQREFAEITARAGDTATSXXX 594
              V +L G   +  W D L  A +D    A ED W  AQ++RE   +   A    T+   
Sbjct: 585  AAVTRLQGRHGVAAWCDTLLDAVLDLADTAPEDAWQVAQLRRELGVVAHDAARAGTARVG 644

Query: 595  XXXXXXXXXXXXG-RPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDG 653
                           P RANFRTG LTVCT  P+R+VPHRVVCL+G+DDG FPR G  D 
Sbjct: 645  LTDVAATISERFAAHPQRANFRTGALTVCTPAPVRAVPHRVVCLLGMDDGAFPRAGGPDA 704

Query: 654  DDALARDPMTGERDIRSEDRQLLLDAILAATQTLVITYTGANEYSGQARPPAVPLAELID 713
            DD LARDP  G+RD R EDRQ+LLD + +A   LV+TY+G +  +G   PPAVP+ E++D
Sbjct: 705  DDVLARDPHVGDRDPRGEDRQVLLDLVRSARDALVVTYSGRDVRTGAVLPPAVPVGEVLD 764

Query: 714  TLKITTEDSALDVLTRHPLQPFDKRNVIPGALVPDEPFTFDQTALVAARASSGERAMRPA 773
             L+         +   HPLQP D+RN  PGAL  D PF+ D TA   A A   E A  P 
Sbjct: 765  ALEAAHPGVRARIEVHHPLQPTDRRNFTPGALGTDGPFSHDGTAFSGADAGHREPAPVPP 824

Query: 774  FFSXXXXXXXXXXXXXXXXXNFFKDPVKGFFR-ALDYTLPWDVEGVSDVMPVDIDALEEW 832
            F                    F + P +GF R  LD       E   D +PV +DAL++W
Sbjct: 825  FLPAALPPAPAADLDLDTLVQFLQHPARGFLRQRLDVASATREEEPDDALPVQLDALQKW 884

Query: 833  TVGDRMLSDILRGMTPAAAQQAEWRRGTLPPGQLG---WRRAIALRDQCALLAAEALGFR 889
             VGDR L+  LRG+      + E  RG LPPG LG    R    + D  A +AAE   F 
Sbjct: 885  AVGDRALAARLRGVAAPEVVRLEGARGGLPPGPLGVAVLREVGPVVDAIAGVAAE---FD 941

Query: 890  DTDGQAYDVDIDLG----GGRRLTGTVSPV---------FGDRLVSVTYSKLGGKHLLQS 936
                ++ DV++DL     G  RLTG V  V          G+  V+  YS++ GK  L++
Sbjct: 942  TAPPRSVDVELDLDVPGVGQLRLTGNVRGVRPVRGGGRATGEVAVTTVYSRIKGKQTLRA 1001

Query: 937  WIPLLALAAGYPDRDWLAVCIGRPARGTTPRVE-GLGGPDNPVDLLADLVAIYDAGRREP 995
            W+ LLAL+A +P  ++  V +GR  RG+T  +  G    D   DLL DL+ +   G R P
Sbjct: 1002 WVELLALSAAHPGTEFRTVLVGRGDRGSTGLLTLGPVRSDAARDLLVDLLELRAVGLRFP 1061

Query: 996  LPLPVKTSYAWAEARHCGDDPE---QKAGFRWRSG-RYPGEDAEPAHVRAWGRDAWLRDL 1051
            LPLPV T+ AWA+    G  P+   + A   W S   +  ED +  +V  WG +  +  L
Sbjct: 1062 LPLPVDTAAAWAQEAWRGRAPDACLRAARRAWTSDFSFDKEDRQEENVTVWGAERPVEHL 1121

Query: 1052 MQPLRPGEEFEGETHRLGAYSSRLWLPLLRAER 1084
            ++   P     G          R+W PLL  +R
Sbjct: 1122 VRWEPPTTLPPGVPTTFEGLVRRVWEPLLGVQR 1154


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.321    0.138    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 9,075,299,400
Number of extensions: 400768069
Number of successful extensions: 821611
Number of sequences better than 10.0: 712
Number of HSP's gapped: 818738
Number of HSP's successfully gapped: 1216
Length of query: 1087
Length of database: 4,236,830,644
Length adjustment: 149
Effective length of query: 938
Effective length of database: 2,373,158,908
Effective search space: 2226023055704
Effective search space used: 2226023055704
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 86 (37.7 bits)