BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_1633
         (1095 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QSX1|A0QSX1_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras...  2159   0.0  
tr|Q1BCT9|Q1BCT9_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras...  1855   0.0  
tr|A1UC54|A1UC54_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras...  1855   0.0  
tr|A3PVT6|A3PVT6_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras...  1855   0.0  
tr|A1T5B1|A1T5B1_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras...  1853   0.0  
tr|A0QKN3|A0QKN3_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras...  1811   0.0  
sp|Q73U92|DNAE2_MYCPA Tax_Id=1770 (dnaE2)RecName: Full=Error-pro...  1806   0.0  
tr|A4TES1|A4TES1_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras...  1803   0.0  
sp|Q7TWL9|DNAE2_MYCBO Tax_Id=1765 (dnaE2)RecName: Full=Error-pro...  1780   0.0  
sp|O50399|DNAE2_MYCTU Tax_Id=1773 (dnaE2)RecName: Full=Error-pro...  1779   0.0  
tr|C6DLB1|C6DLB1_MYCTK Tax_Id=478434 SubName: Full=Error-prone D...  1779   0.0  
tr|D6G3G1|D6G3G1_MYCTU Tax_Id=478435 SubName: Full=DNA polymeras...  1779   0.0  
tr|D5YWX6|D5YWX6_MYCTU Tax_Id=515616 SubName: Full=Error-prone D...  1779   0.0  
tr|D5PCP2|D5PCP2_9MYCO Tax_Id=525368 (dnaE2)SubName: Full=DNA-di...  1778   0.0  
tr|B2HDQ0|B2HDQ0_MYCMM Tax_Id=216594 (dnaE2)SubName: Full=DNA po...  1756   0.0  
tr|A5WSU2|A5WSU2_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras...  1754   0.0  
tr|A5U844|A5U844_MYCTA Tax_Id=419947 (dnaE2)SubName: Full=DNA po...  1754   0.0  
tr|D6FS66|D6FS66_MYCTU Tax_Id=611304 SubName: Full=DNA polymeras...  1754   0.0  
tr|D6FLT7|D6FLT7_MYCTU Tax_Id=611303 SubName: Full=DNA polymeras...  1754   0.0  
tr|D6FA42|D6FA42_MYCTU Tax_Id=611302 SubName: Full=DNA polymeras...  1754   0.0  
tr|D5ZLQ9|D5ZLQ9_MYCTU Tax_Id=537210 SubName: Full=DNA polymeras...  1754   0.0  
tr|C1AHI6|C1AHI6_MYCBT Tax_Id=561275 (dnaE2)SubName: Full=Error-...  1752   0.0  
tr|A1KP63|A1KP63_MYCBP Tax_Id=410289 (dnaE2)SubName: Full=Probab...  1752   0.0  
tr|A2VPF9|A2VPF9_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras...  1741   0.0  
tr|A0PMI1|A0PMI1_MYCUA Tax_Id=362242 (dnaE2)SubName: Full=DNA po...  1721   0.0  
tr|D5PQX7|D5PQX7_COREQ Tax_Id=525370 (dnaE2)SubName: Full=DNA-di...  1664   0.0  
tr|C0ZWF2|C0ZWF2_RHOE4 Tax_Id=234621 (dnaE2)SubName: Full=Error-...  1628   0.0  
tr|C1B138|C1B138_RHOOB Tax_Id=632772 (dnaE2)SubName: Full=Error-...  1626   0.0  
tr|D5YJZ7|D5YJZ7_MYCTU Tax_Id=520140 SubName: Full=DNA polymeras...  1618   0.0  
tr|Q0S382|Q0S382_RHOSR Tax_Id=101510 (dnaE2)SubName: Full=DNA-di...  1617   0.0  
tr|A4KLQ9|A4KLQ9_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras...  1615   0.0  
tr|B1MG32|B1MG32_MYCA9 Tax_Id=561007 SubName: Full=Error-prone D...  1606   0.0  
tr|C3JGP4|C3JGP4_RHOER Tax_Id=596309 SubName: Full=DNA polymeras...  1601   0.0  
sp|Q5Z1D1|DNAE2_NOCFA Tax_Id=37329 (dnaE2)RecName: Full=Error-pr...  1560   0.0  
tr|D0L8J4|D0L8J4_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras...  1497   0.0  
tr|D5UUJ4|D5UUJ4_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras...  1493   0.0  
tr|C8XBY4|C8XBY4_NAKMY Tax_Id=479431 SubName: Full=DNA polymeras...  1377   0.0  
tr|A4FP51|A4FP51_SACEN Tax_Id=405948 (dnaE2)SubName: Full=DNA po...  1344   0.0  
tr|D5Z8L0|D5Z8L0_MYCTU Tax_Id=537209 SubName: Full=DNA polymeras...  1321   0.0  
tr|D3CHG8|D3CHG8_9ACTO Tax_Id=648999 SubName: Full=DNA polymeras...  1321   0.0  
tr|D1SIS9|D1SIS9_9ACTO Tax_Id=644283 SubName: Full=DNA polymeras...  1320   0.0  
tr|Q0RNQ7|Q0RNQ7_FRAAA Tax_Id=326424 SubName: Full=Putative DNA ...  1314   0.0  
tr|A8LY60|A8LY60_SALAI Tax_Id=391037 SubName: Full=DNA polymeras...  1295   0.0  
tr|A4X9U2|A4X9U2_SALTO Tax_Id=369723 SubName: Full=DNA polymeras...  1277   0.0  
tr|D1VJQ4|D1VJQ4_9ACTO Tax_Id=298654 SubName: Full=DNA polymeras...  1263   0.0  

>tr|A0QSX1|A0QSX1_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase
            III, alpha subunit, putative;[Mycobacterium smegmatis]
          Length = 1095

 Score = 2159 bits (5594), Expect = 0.0
 Identities = 1075/1095 (98%), Positives = 1075/1095 (98%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL
Sbjct: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT
Sbjct: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ
Sbjct: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALSDGGP          VDRFGADRVSIELTHHGHPCD
Sbjct: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPDAAAAALADLVDRFGADRVSIELTHHGHPCD 240

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALAELAPRFGLGVVATTAAHFATPSRGRL          NSIDTAAGWLAPLGGV
Sbjct: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLAMAMAAIRARNSIDTAAGWLAPLGGV 300

Query: 301  HLRSGEEMARLFDPEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAG 360
            HLRSGEEMARLFDPEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAG
Sbjct: 301  HLRSGEEMARLFDPEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAG 360

Query: 361  AARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANS 420
            AARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANS
Sbjct: 361  AARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANS 420

Query: 421  AVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAA 480
            AVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAA
Sbjct: 421  AVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAA 480

Query: 481  QVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQ 540
            QVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQ
Sbjct: 481  QVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQ 540

Query: 541  IANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLG 600
            IANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLG
Sbjct: 541  IANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLG 600

Query: 601  MLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLK 660
            MLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLK
Sbjct: 601  MLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLK 660

Query: 661  PREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQ 720
            PREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQ
Sbjct: 661  PREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQ 720

Query: 721  LMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEK 780
            LMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEK
Sbjct: 721  LMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEK 780

Query: 781  LEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRH 840
            LEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRH
Sbjct: 781  LEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRH 840

Query: 841  GVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLT 900
            GVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLT
Sbjct: 841  GVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLT 900

Query: 901  SRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMS 960
            SRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMS
Sbjct: 901  SRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMS 960

Query: 961  ALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRP 1020
            ALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRP
Sbjct: 961  ALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRP 1020

Query: 1021 ATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRM 1080
            ATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRM
Sbjct: 1021 ATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRM 1080

Query: 1081 DAVNLRVGSRSRDFR 1095
            DAVNLRVGSRSRDFR
Sbjct: 1081 DAVNLRVGSRSRDFR 1095


>tr|Q1BCT9|Q1BCT9_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase
            III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.]
          Length = 1099

 Score = 1855 bits (4806), Expect = 0.0
 Identities = 922/1101 (83%), Positives = 997/1101 (90%), Gaps = 8/1101 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPL-ESPGDGGDSPAWSRKRGAYEPPDQARMPASA 59
            MG+ NGP +W E+ERVL  KPRR+G  L E PGDGGDSPAWSRKRGAY+ P   R    A
Sbjct: 1    MGFSNGP-TWPEIERVLNGKPRRAGESLREPPGDGGDSPAWSRKRGAYQAPQLPRS-GGA 58

Query: 60   LPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVA 119
            +PYAELHAHSAYSFLDGA TPEELVEEAARL+LRAIALTDHDGLYGVVRFAEAARELD+ 
Sbjct: 59   VPYAELHAHSAYSFLDGAGTPEELVEEAARLDLRAIALTDHDGLYGVVRFAEAARELDMR 118

Query: 120  TVFGAELSL---SNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRY 176
            TVFGAELSL   +  AR E PDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKG+PRY
Sbjct: 119  TVFGAELSLGMGARSARNEVPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGKPRY 178

Query: 177  DFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHG 236
            D+D LTEAAGGHWHILTGCRKGHVRQALS+GGP          VDRFG DRVS+ELTHHG
Sbjct: 179  DYDTLTEAAGGHWHILTGCRKGHVRQALSEGGPAAAEKALADLVDRFGRDRVSVELTHHG 238

Query: 237  HPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAP 296
            HP DDERNAALAELAPRFGL VVATTAAHFA PSRGRL          +SID AAG+LAP
Sbjct: 239  HPLDDERNAALAELAPRFGLTVVATTAAHFAEPSRGRLAMAMGAIRARHSIDEAAGYLAP 298

Query: 297  LGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLR 354
            LGG HLRSGEEMARLF   P+ V AAADLGEQCAFGLALIAP+LPPFDVP GHTEDSWLR
Sbjct: 299  LGGSHLRSGEEMARLFAHCPQVVTAAADLGEQCAFGLALIAPKLPPFDVPAGHTEDSWLR 358

Query: 355  HLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGR 414
            HL M GA  RYGPPERAP+AYAQIEHELR+IE+L FPGYFLVVHDIT+FC++N IL QGR
Sbjct: 359  HLVMLGARNRYGPPERAPQAYAQIEHELRVIEKLSFPGYFLVVHDITRFCKENGILAQGR 418

Query: 415  GSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERY 474
            GSAANSAVCYALGVTNVDP+AN+LLFERFLSPARDGPPDIDIDIESDLRE  IQYVY+RY
Sbjct: 419  GSAANSAVCYALGVTNVDPVANELLFERFLSPARDGPPDIDIDIESDLREQAIQYVYDRY 478

Query: 475  GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQV 534
            GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSK LS+W+G  DSPD+  IPE V
Sbjct: 479  GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKQLSKWNGLADSPDIEGIPEPV 538

Query: 535  IELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKF 594
            ++LA QI+NLPRHMGIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKF
Sbjct: 539  VDLALQISNLPRHMGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKF 598

Query: 595  DMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMA 654
            DMLGLGMLSALHY IDLV EHKG++VDLA LDLSEPAVYEMLQRADSVGVFQVESRAQMA
Sbjct: 599  DMLGLGMLSALHYCIDLVREHKGLDVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMA 658

Query: 655  TLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGV 714
            TLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYIKRRNG+EPVTYDHPSM  AL+KTLGV
Sbjct: 659  TLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIKRRNGEEPVTYDHPSMANALRKTLGV 718

Query: 715  PLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVA 774
            PLFQEQLMQLAVDCAGF+AAEADQLRRAMGSKRST KMRRLR RFYDGMR+RHGITG VA
Sbjct: 719  PLFQEQLMQLAVDCAGFTAAEADQLRRAMGSKRSTEKMRRLRGRFYDGMRQRHGITGEVA 778

Query: 775  DRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV 834
            DRIY+KLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV
Sbjct: 779  DRIYDKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV 838

Query: 835  ADARRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFT 894
            ADARRHGVTVHGPDVNASLA+A LE+ G +VRLGLG+VRHIGDDLA+RIV+ER+ANG F 
Sbjct: 839  ADARRHGVTVHGPDVNASLAYATLESAGTEVRLGLGAVRHIGDDLAERIVEERKANGPFE 898

Query: 895  SLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIP 954
            SLLDLT RVQL+VPQTEALATAGALGCFG+TRREGLWAAGAAA +RPDRLPGVGS+  +P
Sbjct: 899  SLLDLTGRVQLSVPQTEALATAGALGCFGVTRREGLWAAGAAAAERPDRLPGVGSAGQVP 958

Query: 955  PLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAV 1014
             LPGMS LEL+AADVWATG+SPDSYPT++LR++LD++GVVP  RLLDV DGTR+LVAGAV
Sbjct: 959  SLPGMSKLELAAADVWATGVSPDSYPTQFLRENLDAMGVVPAGRLLDVPDGTRVLVAGAV 1018

Query: 1015 THRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVT 1074
            THRQRPATAQGVTF+NLEDE GMVNV+C+P +WSR R++AQTAPA+++RGIVQNATGAVT
Sbjct: 1019 THRQRPATAQGVTFLNLEDETGMVNVVCSPQLWSRQRRLAQTAPAMVIRGIVQNATGAVT 1078

Query: 1075 VVADRMDAVNLRVGSRSRDFR 1095
            VVAD++  +++RVGS+SRDFR
Sbjct: 1079 VVADKLGKLDMRVGSKSRDFR 1099


>tr|A1UC54|A1UC54_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase
            III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.]
          Length = 1099

 Score = 1855 bits (4806), Expect = 0.0
 Identities = 922/1101 (83%), Positives = 997/1101 (90%), Gaps = 8/1101 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPL-ESPGDGGDSPAWSRKRGAYEPPDQARMPASA 59
            MG+ NGP +W E+ERVL  KPRR+G  L E PGDGGDSPAWSRKRGAY+ P   R    A
Sbjct: 1    MGFSNGP-TWPEIERVLNGKPRRAGESLREPPGDGGDSPAWSRKRGAYQAPQLPRS-GGA 58

Query: 60   LPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVA 119
            +PYAELHAHSAYSFLDGA TPEELVEEAARL+LRAIALTDHDGLYGVVRFAEAARELD+ 
Sbjct: 59   VPYAELHAHSAYSFLDGAGTPEELVEEAARLDLRAIALTDHDGLYGVVRFAEAARELDMR 118

Query: 120  TVFGAELSL---SNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRY 176
            TVFGAELSL   +  AR E PDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKG+PRY
Sbjct: 119  TVFGAELSLGMGARSARNEVPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGKPRY 178

Query: 177  DFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHG 236
            D+D LTEAAGGHWHILTGCRKGHVRQALS+GGP          VDRFG DRVS+ELTHHG
Sbjct: 179  DYDTLTEAAGGHWHILTGCRKGHVRQALSEGGPAAAEKALADLVDRFGRDRVSVELTHHG 238

Query: 237  HPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAP 296
            HP DDERNAALAELAPRFGL VVATTAAHFA PSRGRL          +SID AAG+LAP
Sbjct: 239  HPLDDERNAALAELAPRFGLTVVATTAAHFAEPSRGRLAMAMGAIRARHSIDEAAGYLAP 298

Query: 297  LGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLR 354
            LGG HLRSGEEMARLF   P+ V AAADLGEQCAFGLALIAP+LPPFDVP GHTEDSWLR
Sbjct: 299  LGGSHLRSGEEMARLFAHCPQVVTAAADLGEQCAFGLALIAPKLPPFDVPAGHTEDSWLR 358

Query: 355  HLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGR 414
            HL M GA  RYGPPERAP+AYAQIEHELR+IE+L FPGYFLVVHDIT+FC++N IL QGR
Sbjct: 359  HLVMLGARNRYGPPERAPQAYAQIEHELRVIEKLSFPGYFLVVHDITRFCKENGILAQGR 418

Query: 415  GSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERY 474
            GSAANSAVCYALGVTNVDP+AN+LLFERFLSPARDGPPDIDIDIESDLRE  IQYVY+RY
Sbjct: 419  GSAANSAVCYALGVTNVDPVANELLFERFLSPARDGPPDIDIDIESDLREQAIQYVYDRY 478

Query: 475  GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQV 534
            GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSK LS+W+G  DSPD+  IPE V
Sbjct: 479  GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKQLSKWNGLADSPDIEGIPEPV 538

Query: 535  IELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKF 594
            ++LA QI+NLPRHMGIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKF
Sbjct: 539  VDLALQISNLPRHMGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKF 598

Query: 595  DMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMA 654
            DMLGLGMLSALHY IDLV EHKG++VDLA LDLSEPAVYEMLQRADSVGVFQVESRAQMA
Sbjct: 599  DMLGLGMLSALHYCIDLVREHKGLDVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMA 658

Query: 655  TLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGV 714
            TLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYIKRRNG+EPVTYDHPSM  AL+KTLGV
Sbjct: 659  TLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIKRRNGEEPVTYDHPSMANALRKTLGV 718

Query: 715  PLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVA 774
            PLFQEQLMQLAVDCAGF+AAEADQLRRAMGSKRST KMRRLR RFYDGMR+RHGITG VA
Sbjct: 719  PLFQEQLMQLAVDCAGFTAAEADQLRRAMGSKRSTEKMRRLRGRFYDGMRQRHGITGEVA 778

Query: 775  DRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV 834
            DRIY+KLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV
Sbjct: 779  DRIYDKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV 838

Query: 835  ADARRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFT 894
            ADARRHGVTVHGPDVNASLA+A LE+ G +VRLGLG+VRHIGDDLA+RIV+ER+ANG F 
Sbjct: 839  ADARRHGVTVHGPDVNASLAYATLESAGTEVRLGLGAVRHIGDDLAERIVEERKANGPFE 898

Query: 895  SLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIP 954
            SLLDLT RVQL+VPQTEALATAGALGCFG+TRREGLWAAGAAA +RPDRLPGVGS+  +P
Sbjct: 899  SLLDLTGRVQLSVPQTEALATAGALGCFGVTRREGLWAAGAAAAERPDRLPGVGSAGQVP 958

Query: 955  PLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAV 1014
             LPGMS LEL+AADVWATG+SPDSYPT++LR++LD++GVVP  RLLDV DGTR+LVAGAV
Sbjct: 959  SLPGMSKLELAAADVWATGVSPDSYPTQFLRENLDAMGVVPAGRLLDVPDGTRVLVAGAV 1018

Query: 1015 THRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVT 1074
            THRQRPATAQGVTF+NLEDE GMVNV+C+P +WSR R++AQTAPA+++RGIVQNATGAVT
Sbjct: 1019 THRQRPATAQGVTFLNLEDETGMVNVVCSPQLWSRQRRLAQTAPAMVIRGIVQNATGAVT 1078

Query: 1075 VVADRMDAVNLRVGSRSRDFR 1095
            VVAD++  +++RVGS+SRDFR
Sbjct: 1079 VVADKLGKLDMRVGSKSRDFR 1099


>tr|A3PVT6|A3PVT6_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase
            III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.]
          Length = 1099

 Score = 1855 bits (4805), Expect = 0.0
 Identities = 921/1101 (83%), Positives = 997/1101 (90%), Gaps = 8/1101 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPL-ESPGDGGDSPAWSRKRGAYEPPDQARMPASA 59
            MG+ NGP +W E+ERVL  KPRR+G  L E PGDGGDSPAWSRKRGAY+ P   R    A
Sbjct: 1    MGFSNGP-TWPEIERVLNGKPRRAGESLREPPGDGGDSPAWSRKRGAYQAPQLPRS-GGA 58

Query: 60   LPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVA 119
            +PYAELHAHSAYSFLDGA TPEELVEEAARL+LRAIALTDHDGLYGVVRFAEAARELD+ 
Sbjct: 59   VPYAELHAHSAYSFLDGAGTPEELVEEAARLDLRAIALTDHDGLYGVVRFAEAARELDMR 118

Query: 120  TVFGAELSL---SNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRY 176
            TVFGAELSL   +  AR E PDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKG+PRY
Sbjct: 119  TVFGAELSLGMGARSARNEVPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGKPRY 178

Query: 177  DFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHG 236
            D+D LTEAAGGHWHILTGCRKGHVRQALS+GGP          VDRFG DRVS+ELTHHG
Sbjct: 179  DYDALTEAAGGHWHILTGCRKGHVRQALSEGGPAAAEKALADLVDRFGRDRVSVELTHHG 238

Query: 237  HPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAP 296
            HP DDERNAALAELAPRFGL VVATTAAHFA PSRGRL          +SID AAG+LAP
Sbjct: 239  HPLDDERNAALAELAPRFGLTVVATTAAHFAEPSRGRLAMAMGAIRARHSIDEAAGYLAP 298

Query: 297  LGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLR 354
            LGG HLRSGEEMARLF   P+ V AAADLGEQCAFGLALIAP+LPPFDVP GHTEDSWLR
Sbjct: 299  LGGSHLRSGEEMARLFAHCPQVVTAAADLGEQCAFGLALIAPKLPPFDVPAGHTEDSWLR 358

Query: 355  HLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGR 414
            HL M GA  RYGPPERAP+AYAQIEHELR+IE+L FPGYFLVVHDIT+FC++N IL QGR
Sbjct: 359  HLVMLGARNRYGPPERAPQAYAQIEHELRVIEKLSFPGYFLVVHDITRFCKENGILAQGR 418

Query: 415  GSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERY 474
            GSAANSAVCYALGVTNVDP+AN+LLFERFLSPARDGPPDIDIDIESDLRE  IQYVY+RY
Sbjct: 419  GSAANSAVCYALGVTNVDPVANELLFERFLSPARDGPPDIDIDIESDLREQAIQYVYDRY 478

Query: 475  GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQV 534
            GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSK LS+W+G  DSPD+  IPE V
Sbjct: 479  GRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKQLSKWNGLADSPDIEGIPEPV 538

Query: 535  IELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKF 594
            ++LA QI+NLPRHMGIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKF
Sbjct: 539  VDLALQISNLPRHMGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKF 598

Query: 595  DMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMA 654
            DMLGLGMLSALHY IDLV EHKG++VDLA LDLSEPAVYEMLQRADSVGVFQVESRAQMA
Sbjct: 599  DMLGLGMLSALHYCIDLVREHKGLDVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMA 658

Query: 655  TLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGV 714
            TLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYIKRRNG+EPVTYDHPSM  AL+KTLGV
Sbjct: 659  TLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIKRRNGEEPVTYDHPSMANALRKTLGV 718

Query: 715  PLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVA 774
            PLFQEQLMQLAVDCAGF+AAEADQLRRAMGSKRST KMRRLR RFYDGMR+RHGITG VA
Sbjct: 719  PLFQEQLMQLAVDCAGFTAAEADQLRRAMGSKRSTEKMRRLRGRFYDGMRQRHGITGEVA 778

Query: 775  DRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV 834
            DRIY+KLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV
Sbjct: 779  DRIYDKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLV 838

Query: 835  ADARRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFT 894
            ADARRHGVTVHGPDVNASLA+A LE+ G +VRLGLG+VRHIGDDLA+RIV+ER+ANG F 
Sbjct: 839  ADARRHGVTVHGPDVNASLAYATLESAGTEVRLGLGAVRHIGDDLAERIVEERKANGPFE 898

Query: 895  SLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIP 954
            SLLDLT RVQL+VPQTEALATAGALGCFG+TRREGLWAAGAAA +RPDRLPGVGS+  +P
Sbjct: 899  SLLDLTGRVQLSVPQTEALATAGALGCFGVTRREGLWAAGAAAAERPDRLPGVGSAGQVP 958

Query: 955  PLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAV 1014
             LPGMS LEL+AADVWATG+SPDSYPT++LR++LD++GV+P  RLLDV DGTR+LVAGAV
Sbjct: 959  SLPGMSKLELAAADVWATGVSPDSYPTQFLRENLDAMGVIPAGRLLDVPDGTRVLVAGAV 1018

Query: 1015 THRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVT 1074
            THRQRPATAQGVTF+NLEDE GMVNV+C+P +WSR R++AQTAPA+++RGIVQNATGAVT
Sbjct: 1019 THRQRPATAQGVTFLNLEDETGMVNVVCSPQLWSRQRRLAQTAPAMVIRGIVQNATGAVT 1078

Query: 1075 VVADRMDAVNLRVGSRSRDFR 1095
            VVAD++  +++RVGS+SRDFR
Sbjct: 1079 VVADKLGKLDMRVGSKSRDFR 1099


>tr|A1T5B1|A1T5B1_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase
            III, alpha subunit; EC=2.7.7.7;[Mycobacterium
            vanbaalenii]
          Length = 1098

 Score = 1853 bits (4799), Expect = 0.0
 Identities = 919/1098 (83%), Positives = 982/1098 (89%), Gaps = 3/1098 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESP-GDGGDSPAWSRKRGAYEPPDQARMPASA 59
            MGWH GPPSW+EMERVL+ KPRR+G P++   GDGGDSPAWSRKRG Y  P+      S+
Sbjct: 1    MGWHTGPPSWTEMERVLSGKPRRAGWPIDQQIGDGGDSPAWSRKRGEYHAPEGPGAQESS 60

Query: 60   LPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVA 119
             PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVA
Sbjct: 61   TPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVA 120

Query: 120  TVFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFD 179
            TVFGAELSL    RT+ PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG  RYDFD
Sbjct: 121  TVFGAELSLGGGTRTDVPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGVLRYDFD 180

Query: 180  QLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPC 239
             LTEAAGGHW ILTGCRKGHVRQALS GGP          VDRFG DRV++ELTHHGHP 
Sbjct: 181  ALTEAAGGHWQILTGCRKGHVRQALSTGGPEAAEAALADLVDRFGPDRVTVELTHHGHPL 240

Query: 240  DDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGG 299
            DDERNAALA LAPRFGLGVVATTAAHFA P+RGRL          NSID AAG+LAPLGG
Sbjct: 241  DDERNAALAALAPRFGLGVVATTAAHFAEPARGRLAMAMGAIRARNSIDEAAGYLAPLGG 300

Query: 300  VHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLA 357
             HLRSG+EMAR+F   PE V AAA+LGEQCAFGLALIAPQLPPFDVPDGHTE SWLRHL 
Sbjct: 301  SHLRSGDEMARMFAHCPEVVTAAAELGEQCAFGLALIAPQLPPFDVPDGHTESSWLRHLV 360

Query: 358  MAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSA 417
            M GA  RYGPPERA +AYAQIEHEL +IEQL FPGYFLVVHDIT+FCRDNNIL QGRGSA
Sbjct: 361  MQGARERYGPPERASRAYAQIEHELAVIEQLNFPGYFLVVHDITRFCRDNNILSQGRGSA 420

Query: 418  ANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRD 477
            ANSAVCYAL VTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLREN IQYVY+RYGR+
Sbjct: 421  ANSAVCYALKVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENAIQYVYQRYGRE 480

Query: 478  YAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIEL 537
            YAAQVANVITYRGRSA+RDMARALGFSQGQQDAWSK +S+W    D+  V +IP  V++L
Sbjct: 481  YAAQVANVITYRGRSAVRDMARALGFSQGQQDAWSKQVSQWGNLADATHVEDIPGPVVDL 540

Query: 538  ANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDML 597
            A QI+NLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFD+L
Sbjct: 541  AKQISNLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLL 600

Query: 598  GLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLP 657
            GLGMLSALHYAIDLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLP
Sbjct: 601  GLGMLSALHYAIDLVAEHKGIEVDLAKLDLSEPAVYEMLARADSVGVFQVESRAQMATLP 660

Query: 658  RLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLF 717
            RLKPR FYDLVVEVALIRPGPIQGGSVHPYIKRRNGQE VTYDHPSME AL+KTLGVPLF
Sbjct: 661  RLKPRMFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEAVTYDHPSMESALRKTLGVPLF 720

Query: 718  QEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRI 777
            QEQLMQLAVDCAGF+ AEADQLRRAMGSKRST KMRRLR RF+DGM E HG+TG VA RI
Sbjct: 721  QEQLMQLAVDCAGFTPAEADQLRRAMGSKRSTEKMRRLRGRFFDGMAELHGVTGDVAQRI 780

Query: 778  YEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADA 837
            YEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADA
Sbjct: 781  YEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADA 840

Query: 838  RRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLL 897
            RRHGV VHGPDVNA LAHA LEN GLDVRLGLG VRHIGD+LA+R+V ER+A+G FTSL 
Sbjct: 841  RRHGVVVHGPDVNAGLAHATLENHGLDVRLGLGGVRHIGDELAERLVGERKAHGPFTSLT 900

Query: 898  DLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLP 957
            DLT RVQL+VPQTEALATAGALGCFGITRREGLWAAGAAAT+RPDRLPGVGSS+H+P LP
Sbjct: 901  DLTRRVQLSVPQTEALATAGALGCFGITRREGLWAAGAAATERPDRLPGVGSSSHVPSLP 960

Query: 958  GMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHR 1017
            GM+ LEL+ ADVWATG+SPD YPTE+LR+ LD++GVVP D+LL + DGTR+LVAGAVTHR
Sbjct: 961  GMTELELTVADVWATGVSPDRYPTEFLREDLDAMGVVPADQLLSLPDGTRVLVAGAVTHR 1020

Query: 1018 QRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVA 1077
            QRPATAQGVTF+NLEDE GMVNVLC+ GVW+R+RK+AQTA AL+VRGIVQNATGAVTVVA
Sbjct: 1021 QRPATAQGVTFMNLEDETGMVNVLCSQGVWARHRKLAQTASALVVRGIVQNATGAVTVVA 1080

Query: 1078 DRMDAVNLRVGSRSRDFR 1095
            DRM  ++LR  S+SRDFR
Sbjct: 1081 DRMGRLSLRAASKSRDFR 1098


>tr|A0QKN3|A0QKN3_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase
            III, alpha subunit, putative;[Mycobacterium avium]
          Length = 1093

 Score = 1811 bits (4692), Expect = 0.0
 Identities = 899/1097 (81%), Positives = 968/1097 (88%), Gaps = 6/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW NGPPSW+EMERVL SKPRR+G   ESP    D P  SR R  Y PPD+ R   S++
Sbjct: 1    MGWFNGPPSWAEMERVLDSKPRRAG---ESPAPEPDGPL-SRGRATYRPPDEGRAARSSV 56

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELHAHSA+SFLDGASTPEE+VEEAARL+LRA+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 57   PYAELHAHSAFSFLDGASTPEEMVEEAARLDLRALALTDHDGLYGAVRFAEAAAELDVRT 116

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYD D 
Sbjct: 117  VFGAELSLGPSARTEAPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDLDA 176

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALS+GGP          VDRFGA RVSIELT HG P D
Sbjct: 177  LTEAAGGHWHILTGCRKGHVRQALSEGGPDEAARALADLVDRFGAARVSIELTRHGQPLD 236

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALA LAPRFG+GVVATT AHFA PSR RL           S+D+AAGWLAPLGG 
Sbjct: 237  DERNAALAALAPRFGVGVVATTGAHFAGPSRRRLAMAVGAIRARESLDSAAGWLAPLGGS 296

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMARLF   PE V AAA+LGEQCAFGLALIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 297  HLRSGEEMARLFAWCPEAVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRQLTM 356

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
             GA  RYG PE AP+AYAQIEHEL++I QL+FPGYFLVVHDI +FCR+NNILCQGRGSAA
Sbjct: 357  TGARDRYGSPEHAPRAYAQIEHELKVIAQLQFPGYFLVVHDIARFCRENNILCQGRGSAA 416

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDID+DIESD RE VIQYVY+RYGRDY
Sbjct: 417  NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDRYGRDY 476

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRG+ A+RDMARALGFSQGQQDAWSK +S W G  DSPDV  IP QVI+LA
Sbjct: 477  AAQVANVITYRGKIAVRDMARALGFSQGQQDAWSKQISSWSGLADSPDVEGIPPQVIDLA 536

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
            NQ+ NLPRH+GIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 537  NQVRNLPRHLGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLG 596

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHYAIDLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 597  LGMLSALHYAIDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 656

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV YDHPSMEPAL+KTLGVPLFQ
Sbjct: 657  LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVLYDHPSMEPALRKTLGVPLFQ 716

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DR Y
Sbjct: 717  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRTY 776

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKLEAFANFGFPESH+LSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 777  EKLEAFANFGFPESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 836

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGVTVHGPDVNASLAHA LEN G +VRLGLG+VRHIGDDLA+++V ER+ANG F SLLD
Sbjct: 837  RHGVTVHGPDVNASLAHATLENAGTEVRLGLGAVRHIGDDLAEKLVQERKANGPFASLLD 896

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LT+R+QL+VPQTEALATAGA GCFG++RRE LWAAGAAATQRPDRLPGVGSS+HIP LPG
Sbjct: 897  LTARLQLSVPQTEALATAGAFGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPALPG 956

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATGISPDSYPT++LR  LD++GVVP  RL  V DG R+L+AGAVTHRQ
Sbjct: 957  MSELELAAADVWATGISPDSYPTQFLRDDLDAMGVVPAARLGSVPDGDRVLIAGAVTHRQ 1016

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RP TAQGVTF+NLEDE GMVNVLC PGVW+R+RK+A TAPAL+VRG VQNA+GA+TVVA+
Sbjct: 1017 RPGTAQGVTFLNLEDETGMVNVLCTPGVWARHRKLANTAPALLVRGQVQNASGAITVVAE 1076

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            R+  + L VGSRSRDFR
Sbjct: 1077 RLGRITLAVGSRSRDFR 1093


>sp|Q73U92|DNAE2_MYCPA Tax_Id=1770 (dnaE2)RecName: Full=Error-prone
            DNA polymerase; EC=2.7.7.7;[Mycobacterium
            paratuberculosis]
          Length = 1093

 Score = 1806 bits (4677), Expect = 0.0
 Identities = 897/1097 (81%), Positives = 967/1097 (88%), Gaps = 6/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW NGPPSW+EMERVL SKPRR+G   ES     D P  SR R  Y PPD+ R   S++
Sbjct: 1    MGWFNGPPSWAEMERVLDSKPRRAG---ESAAPEPDGPL-SRGRATYRPPDEGRAARSSV 56

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELHAHSA+SFLDGASTPEE+VEEAARL+LRA+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 57   PYAELHAHSAFSFLDGASTPEEMVEEAARLDLRALALTDHDGLYGAVRFAEAAAELDVRT 116

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYD D 
Sbjct: 117  VFGAELSLGPSARTEAPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDLDA 176

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALSDGGP          VDRFGA RVSIELT HG P D
Sbjct: 177  LTEAAGGHWHILTGCRKGHVRQALSDGGPDAAARALADLVDRFGAARVSIELTRHGQPLD 236

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALA LAPRFG+GVVATT AHFA PSR RL           S+D+AAGWLAPLGG 
Sbjct: 237  DERNAALAALAPRFGVGVVATTGAHFAGPSRRRLAMAMGAIRARESLDSAAGWLAPLGGS 296

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSG EMARLF   P+ V AAA+LGEQCAFGLALIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 297  HLRSGAEMARLFAWRPQAVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRQLTM 356

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
             GA  RYG PE AP+AYAQIEHEL++I QL+FPGYFLVVHDI +FCR+NNILCQGRGSAA
Sbjct: 357  TGARDRYGSPEHAPRAYAQIEHELKVIAQLQFPGYFLVVHDIARFCRENNILCQGRGSAA 416

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDID+DIESD RE VIQYVY+RYGRDY
Sbjct: 417  NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDRYGRDY 476

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRG+ A+RDMARALG+SQGQQDAWSK +S W G  DSPDV  IP QVI+LA
Sbjct: 477  AAQVANVITYRGKIAVRDMARALGYSQGQQDAWSKQISSWSGPADSPDVEGIPPQVIDLA 536

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
            NQ+ NLPRH+GIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 537  NQVRNLPRHLGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLG 596

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHYAIDLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 597  LGMLSALHYAIDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 656

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV YDHPSMEPAL+KTLGVPLFQ
Sbjct: 657  LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVLYDHPSMEPALRKTLGVPLFQ 716

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLRSRFYDGMR  HG    V DR Y
Sbjct: 717  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRSRFYDGMRALHGAPDEVIDRTY 776

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKLEAFANFGFPESH+LSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 777  EKLEAFANFGFPESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 836

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGVTVHGPDVNASLAHA LEN G +VRLGLG+VRHIGDDLA+++V ER+ANG FTSLLD
Sbjct: 837  RHGVTVHGPDVNASLAHATLENAGTEVRLGLGAVRHIGDDLAEKLVQERKANGPFTSLLD 896

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LT+R+QL+V QTEALATAGA GCFG++RRE LWAAGAAATQRPDRLPGVGSS+HIP LPG
Sbjct: 897  LTARLQLSVQQTEALATAGAFGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPALPG 956

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATGISPDSYPT++LR  LD++GVVP  RL  V DG R+L+AGAVTHRQ
Sbjct: 957  MSELELAAADVWATGISPDSYPTQFLRDDLDAMGVVPAARLGSVPDGDRVLIAGAVTHRQ 1016

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RP TAQGVTF+NLEDE GMVNVLC PGVW+R+RK+A TAPAL+VRG VQNA+GA+TVVA+
Sbjct: 1017 RPGTAQGVTFLNLEDETGMVNVLCTPGVWARHRKLANTAPALLVRGQVQNASGAITVVAE 1076

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            R+  + L VGSRSRDFR
Sbjct: 1077 RLGRITLAVGSRSRDFR 1093


>tr|A4TES1|A4TES1_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase
            III, alpha subunit; EC=2.7.7.7;[Mycobacterium gilvum]
          Length = 1087

 Score = 1803 bits (4669), Expect = 0.0
 Identities = 901/1088 (82%), Positives = 973/1088 (89%), Gaps = 6/1088 (0%)

Query: 13   MERVLTSKPRRSGLPLESP-GDGGDSPAWSRKRGAYEPPDQARMPAS--ALPYAELHAHS 69
            M RVL  KPRR+G P+++  GDGGDSPAWS KRG Y  P+ +R PA+  ++PYAELHAHS
Sbjct: 1    MRRVLEGKPRRAGWPIDAQVGDGGDSPAWSSKRGQYRAPE-SRGPATGRSMPYAELHAHS 59

Query: 70   AYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLS 129
            AYSFLDGASTPEELVEEA+RL LRA+ALTDHDGLYGVVRFAEAA+ELDV TVFGAELSL 
Sbjct: 60   AYSFLDGASTPEELVEEASRLGLRALALTDHDGLYGVVRFAEAAKELDVDTVFGAELSLG 119

Query: 130  NVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHW 189
               RT+ PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG  RYDFD LTEAAGGHW
Sbjct: 120  GGTRTDVPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGVLRYDFDALTEAAGGHW 179

Query: 190  HILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAE 249
             ILTGCRKGHVRQAL  GG           VDRFG +RV++ELTHHGHP DDERNAALA 
Sbjct: 180  QILTGCRKGHVRQALLRGGDSAAEAALADLVDRFGRERVTVELTHHGHPLDDERNAALAA 239

Query: 250  LAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMA 309
            LAPRFGL V+ATTAAHFA PSRGRL          NSID AAG+LAPLGG HLRSGEEMA
Sbjct: 240  LAPRFGLTVIATTAAHFAEPSRGRLAMAMGAIRARNSIDEAAGYLAPLGGSHLRSGEEMA 299

Query: 310  RLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGP 367
            R+F   PE V AAADLGEQCAFGLALIAPQLPPF+VP GHTE+SWLRHL M GA  RYGP
Sbjct: 300  RVFAHCPEVVTAAADLGEQCAFGLALIAPQLPPFEVPAGHTENSWLRHLVMQGARERYGP 359

Query: 368  PERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALG 427
            PERA +AYAQIEHELR+IEQL FPGYFLVVHDIT+FCR+N IL QGRGSAANSAVCYAL 
Sbjct: 360  PERASRAYAQIEHELRVIEQLNFPGYFLVVHDITRFCRENAILSQGRGSAANSAVCYALK 419

Query: 428  VTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVIT 487
            VTNVDPIAN LLFERFLSPARDGPPDIDIDIESDLRE  IQYVYERYGR+YAAQVANVIT
Sbjct: 420  VTNVDPIANGLLFERFLSPARDGPPDIDIDIESDLREKAIQYVYERYGREYAAQVANVIT 479

Query: 488  YRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRH 547
            YRGRSA+RDMARALGFSQGQQDAWSK +S+W    D+  V +IPE VI+LA QI++LPRH
Sbjct: 480  YRGRSAVRDMARALGFSQGQQDAWSKQISQWGNLADATHVEDIPEPVIDLAMQISHLPRH 539

Query: 548  MGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHY 607
            MGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHY
Sbjct: 540  MGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHY 599

Query: 608  AIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDL 667
            AIDLVAEHKG+EVDLA LDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPR FYDL
Sbjct: 600  AIDLVAEHKGLEVDLAKLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPRMFYDL 659

Query: 668  VVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVD 727
            VVEVALIRPGPIQGGSVHPYIKRRNGQEPVTY+HPSME AL+KTLGVPLFQEQLMQLAVD
Sbjct: 660  VVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYEHPSMERALRKTLGVPLFQEQLMQLAVD 719

Query: 728  CAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANF 787
            CAGFSAAEADQLRRAMGSKRST KMRRLR RF++GM E HGI+G VA RIYEKLEAFANF
Sbjct: 720  CAGFSAAEADQLRRAMGSKRSTEKMRRLRGRFFEGMAELHGISGDVARRIYEKLEAFANF 779

Query: 788  GFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGP 847
            GFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ+LVADARRHGV VHGP
Sbjct: 780  GFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQTLVADARRHGVDVHGP 839

Query: 848  DVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTV 907
            DVNASLAHA LEN GLDVRLGLGS+RHIGD+LAQR+V++R+ NG F SL DLT RVQLTV
Sbjct: 840  DVNASLAHATLENHGLDVRLGLGSIRHIGDELAQRLVEDRKLNGPFVSLTDLTRRVQLTV 899

Query: 908  PQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAA 967
            PQTEALATAGALGCFGITRREGLWAAGAAAT+RPDRLPGVGSS+ +P LPGM+ LEL+AA
Sbjct: 900  PQTEALATAGALGCFGITRREGLWAAGAAATERPDRLPGVGSSSQVPSLPGMTELELTAA 959

Query: 968  DVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVT 1027
            DVWATG+SPD YPTE+LR+ LD++GVVP DRLL V DGTR+LVAGAVTHRQRPATAQGVT
Sbjct: 960  DVWATGVSPDRYPTEFLREDLDAMGVVPADRLLSVRDGTRVLVAGAVTHRQRPATAQGVT 1019

Query: 1028 FINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRV 1087
            F+NLEDE GMVNVLC+ G+W+R+RK+AQTA AL+VRGIVQNATGAVTVVADRM  +N++V
Sbjct: 1020 FLNLEDETGMVNVLCSQGIWARHRKLAQTASALVVRGIVQNATGAVTVVADRMGPINMKV 1079

Query: 1088 GSRSRDFR 1095
             S+SRDFR
Sbjct: 1080 ASKSRDFR 1087


>sp|Q7TWL9|DNAE2_MYCBO Tax_Id=1765 (dnaE2)RecName: Full=Error-prone
            DNA polymerase; EC=2.7.7.7;[Mycobacterium bovis]
          Length = 1091

 Score = 1780 bits (4611), Expect = 0.0
 Identities = 888/1097 (80%), Positives = 963/1097 (87%), Gaps = 8/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW NGPPSW+EMERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++
Sbjct: 1    MGWSNGPPSWAEMERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSV 56

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
             YAELHAHSAYSFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 57   AYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT 116

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD 
Sbjct: 117  VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDA 176

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP D
Sbjct: 177  LTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLD 236

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALA LAPRFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG 
Sbjct: 237  DERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGA 296

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMARLF   PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 297  HLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVM 356

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
            AGA  RYGPP+ AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAA
Sbjct: 357  AGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAA 416

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDY
Sbjct: 417  NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDY 476

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRGRSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA
Sbjct: 477  AAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLA 534

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI NLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 535  TQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLG 594

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 595  LGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 654

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQ
Sbjct: 655  LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQ 714

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIY
Sbjct: 715  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIY 774

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKLEAFANFGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 775  EKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 834

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHGP VNASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL D
Sbjct: 835  RHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPD 894

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LTSRVQL+VPQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPG
Sbjct: 895  LTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPG 954

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQ
Sbjct: 955  MSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQ 1014

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATAQGVTFINLEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+
Sbjct: 1015 RPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAE 1074

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            RM  + L VG+RSRDFR
Sbjct: 1075 RMGRLTLAVGARSRDFR 1091


>sp|O50399|DNAE2_MYCTU Tax_Id=1773 (dnaE2)RecName: Full=Error-prone
            DNA polymerase; EC=2.7.7.7;[Mycobacterium tuberculosis]
          Length = 1098

 Score = 1779 bits (4607), Expect = 0.0
 Identities = 887/1097 (80%), Positives = 963/1097 (87%), Gaps = 8/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            +GW NGPPSW+EMERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++
Sbjct: 8    VGWSNGPPSWAEMERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSV 63

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
             YAELHAHSAYSFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 64   AYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT 123

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD 
Sbjct: 124  VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDA 183

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP D
Sbjct: 184  LTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLD 243

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALA LAPRFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG 
Sbjct: 244  DERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGA 303

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMARLF   PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 304  HLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVM 363

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
            AGA  RYGPP+ AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAA
Sbjct: 364  AGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAA 423

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDY
Sbjct: 424  NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDY 483

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRGRSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA
Sbjct: 484  AAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLA 541

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI NLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 542  TQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLG 601

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 602  LGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 661

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQ
Sbjct: 662  LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQ 721

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIY
Sbjct: 722  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIY 781

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKLEAFANFGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 782  EKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 841

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHGP VNASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL D
Sbjct: 842  RHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPD 901

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LTSRVQL+VPQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPG
Sbjct: 902  LTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPG 961

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQ
Sbjct: 962  MSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQ 1021

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATAQGVTFINLEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+
Sbjct: 1022 RPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAE 1081

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            RM  + L VG+RSRDFR
Sbjct: 1082 RMGRLTLAVGARSRDFR 1098


>tr|C6DLB1|C6DLB1_MYCTK Tax_Id=478434 SubName: Full=Error-prone DNA
            polymerase;[Mycobacterium tuberculosis]
          Length = 1098

 Score = 1779 bits (4607), Expect = 0.0
 Identities = 887/1097 (80%), Positives = 963/1097 (87%), Gaps = 8/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            +GW NGPPSW+EMERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++
Sbjct: 8    VGWSNGPPSWAEMERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSV 63

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
             YAELHAHSAYSFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 64   AYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT 123

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD 
Sbjct: 124  VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDA 183

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP D
Sbjct: 184  LTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLD 243

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALA LAPRFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG 
Sbjct: 244  DERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGA 303

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMARLF   PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 304  HLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVM 363

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
            AGA  RYGPP+ AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAA
Sbjct: 364  AGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAA 423

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDY
Sbjct: 424  NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDY 483

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRGRSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA
Sbjct: 484  AAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLA 541

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI NLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 542  TQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLG 601

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 602  LGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 661

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQ
Sbjct: 662  LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQ 721

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIY
Sbjct: 722  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIY 781

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKLEAFANFGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 782  EKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 841

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHGP VNASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL D
Sbjct: 842  RHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPD 901

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LTSRVQL+VPQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPG
Sbjct: 902  LTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPG 961

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQ
Sbjct: 962  MSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQ 1021

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATAQGVTFINLEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+
Sbjct: 1022 RPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAE 1081

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            RM  + L VG+RSRDFR
Sbjct: 1082 RMGRLTLAVGARSRDFR 1098


>tr|D6G3G1|D6G3G1_MYCTU Tax_Id=478435 SubName: Full=DNA polymerase
            subunit III alpha dnaE2;[Mycobacterium tuberculosis KZN
            605]
          Length = 1094

 Score = 1779 bits (4607), Expect = 0.0
 Identities = 887/1097 (80%), Positives = 963/1097 (87%), Gaps = 8/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            +GW NGPPSW+EMERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++
Sbjct: 4    VGWSNGPPSWAEMERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSV 59

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
             YAELHAHSAYSFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 60   AYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT 119

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD 
Sbjct: 120  VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDA 179

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP D
Sbjct: 180  LTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLD 239

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALA LAPRFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG 
Sbjct: 240  DERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGA 299

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMARLF   PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 300  HLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVM 359

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
            AGA  RYGPP+ AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAA
Sbjct: 360  AGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAA 419

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDY
Sbjct: 420  NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDY 479

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRGRSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA
Sbjct: 480  AAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLA 537

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI NLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 538  TQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLG 597

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 598  LGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 657

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQ
Sbjct: 658  LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQ 717

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIY
Sbjct: 718  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIY 777

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKLEAFANFGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 778  EKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 837

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHGP VNASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL D
Sbjct: 838  RHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPD 897

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LTSRVQL+VPQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPG
Sbjct: 898  LTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPG 957

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQ
Sbjct: 958  MSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQ 1017

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATAQGVTFINLEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+
Sbjct: 1018 RPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAE 1077

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            RM  + L VG+RSRDFR
Sbjct: 1078 RMGRLTLAVGARSRDFR 1094


>tr|D5YWX6|D5YWX6_MYCTU Tax_Id=515616 SubName: Full=Error-prone DNA
            polymerase;[Mycobacterium tuberculosis 02_1987]
          Length = 1098

 Score = 1779 bits (4607), Expect = 0.0
 Identities = 887/1097 (80%), Positives = 963/1097 (87%), Gaps = 8/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            +GW NGPPSW+EMERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++
Sbjct: 8    VGWSNGPPSWAEMERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSV 63

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
             YAELHAHSAYSFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 64   AYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT 123

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD 
Sbjct: 124  VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDA 183

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHWHILTGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP D
Sbjct: 184  LTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLD 243

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNAALA LAPRFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG 
Sbjct: 244  DERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGA 303

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMARLF   PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 304  HLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVM 363

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
            AGA  RYGPP+ AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAA
Sbjct: 364  AGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAA 423

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDY
Sbjct: 424  NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDY 483

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRGRSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA
Sbjct: 484  AAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLA 541

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI NLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 542  TQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLG 601

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 602  LGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 661

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQ
Sbjct: 662  LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQ 721

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIY
Sbjct: 722  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIY 781

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKLEAFANFGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 782  EKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 841

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHGP VNASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL D
Sbjct: 842  RHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPD 901

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LTSRVQL+VPQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPG
Sbjct: 902  LTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPG 961

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQ
Sbjct: 962  MSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQ 1021

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATAQGVTFINLEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+
Sbjct: 1022 RPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAE 1081

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            RM  + L VG+RSRDFR
Sbjct: 1082 RMGRLTLAVGARSRDFR 1098


>tr|D5PCP2|D5PCP2_9MYCO Tax_Id=525368 (dnaE2)SubName:
            Full=DNA-directed DNA polymerase;
            EC=2.7.7.7;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 1080

 Score = 1778 bits (4605), Expect = 0.0
 Identities = 886/1085 (81%), Positives = 957/1085 (88%), Gaps = 7/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL SKPR +G+P    G G D P  SR RG Y PPD AR   S++PYAELHAHSA+S
Sbjct: 1    MERVLDSKPRHAGVPA---GPGEDGPLSSR-RGTYRPPDGARGARSSVPYAELHAHSAFS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL LRA+ALTDHDGLYG VRFAEAA EL++ TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLRALALTDHDGLYGAVRFAEAAAELELRTVFGAELSLGPGA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTETPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS G P          VDRFGADRVSIELTHHG P DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQG-PDAAGRALADLVDRFGADRVSIELTHHGQPPDDERNAALAGLAP 235

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+GVVATT AHFA PSR RL           S+D AAGWLAPLGG HLRSGEEMARLF
Sbjct: 236  RFGVGVVATTGAHFAGPSRRRLAMAMGAIRARQSLDAAAGWLAPLGGSHLRSGEEMARLF 295

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               P+ V AAADLGEQCAFGLALIAP+LPPFDVP GHTEDSWLR L M GA  RYG P+ 
Sbjct: 296  AWRPDAVTAAADLGEQCAFGLALIAPRLPPFDVPAGHTEDSWLRQLTMTGARGRYGTPDA 355

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+A++QIEHEL++I +L+FPGYFLVVHDI +FCR+NNILCQGRGSAANSAVCYALGVT 
Sbjct: 356  APRAFSQIEHELKVIARLQFPGYFLVVHDIARFCRENNILCQGRGSAANSAVCYALGVTA 415

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDID+DIESD RE VIQYVY++YGRDYAAQVANVITYRG
Sbjct: 416  VDPVANELLFERFLSPARDGPPDIDMDIESDQREKVIQYVYDKYGRDYAAQVANVITYRG 475

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            R A+RDMARALGFSQGQQDAWSK L  W+G  DSPDV  IP QV++LANQI NLPRHMGI
Sbjct: 476  RIAVRDMARALGFSQGQQDAWSKQLGHWNGLADSPDVEGIPPQVVDLANQIRNLPRHMGI 535

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYAID
Sbjct: 536  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAID 595

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 596  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRIFYDLVVE 655

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV YDHPSMEPAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 656  VALIRPGPIQGGSVHPYIRRRNGLDPVVYDHPSMEPALRKTLGVPLFQEQLMQLAVDCAG 715

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG T  V DR YEKLEAFANFGFP
Sbjct: 716  FSAAEADQLRRAMGSKRSTERMRRLRDRFYDGMRALHGATDEVIDRAYEKLEAFANFGFP 775

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN
Sbjct: 776  ESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 835

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA LEN G +VRLGLG+VRHIGDDLA+R+V ER+ANG F SLLDLT+R+QL+VPQT
Sbjct: 836  ASLAHATLENAGTEVRLGLGAVRHIGDDLAERLVAERKANGPFASLLDLTTRLQLSVPQT 895

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGA GCFG++RREGLWAAGAAATQRPDRLPGVGSS+H+P LPGMS LEL+AADVW
Sbjct: 896  EALATAGAFGCFGMSRREGLWAAGAAATQRPDRLPGVGSSSHVPALPGMSELELAAADVW 955

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GVVP  +LLDV DG R+L+AGAVTHRQRP TAQGVTF+N
Sbjct: 956  ATGVSPDSYPTQFLRADLDAMGVVPAGKLLDVPDGDRVLIAGAVTHRQRPGTAQGVTFLN 1015

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC P VW+R+RK+A  APA++VRG VQNA+GAVTVVA+R+  + L VGSR
Sbjct: 1016 LEDETGMVNVLCTPAVWARHRKLANAAPAMLVRGQVQNASGAVTVVAERLGRITLAVGSR 1075

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1076 SRDFR 1080


>tr|B2HDQ0|B2HDQ0_MYCMM Tax_Id=216594 (dnaE2)SubName: Full=DNA
            polymerase III, alpha chain, DnaE2;[Mycobacterium
            marinum]
          Length = 1100

 Score = 1756 bits (4548), Expect = 0.0
 Identities = 886/1104 (80%), Positives = 952/1104 (86%), Gaps = 13/1104 (1%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGD----GGDSPAWSRKRGAYEPPDQARMP 56
            MGW NGPPSW+EMERVL  KPR +G+P ++ G     G D P  SRKR  Y P   A   
Sbjct: 1    MGWGNGPPSWAEMERVLDGKPRHAGVP-DAAGPTAEAGWDGPL-SRKRETYAPKPDANRV 58

Query: 57   ASALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAAREL 116
             S++ YAELHAHSAYSFLDGASTPEELVEEAARL+LRA+ALTDH+GLYG VRFAEAA  L
Sbjct: 59   DSSIAYAELHAHSAYSFLDGASTPEELVEEAARLDLRALALTDHNGLYGAVRFAEAASGL 118

Query: 117  DVATVFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRY 176
             V TVFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRY
Sbjct: 119  GVRTVFGAELSLGPEARTEQPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRY 178

Query: 177  DFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHG 236
            DFD LTEAAGGHWHILTGCRKGHVRQAL  GGP          VDRF A RVS+ELTHHG
Sbjct: 179  DFDSLTEAAGGHWHILTGCRKGHVRQALRQGGPDAAERALADLVDRFTAGRVSVELTHHG 238

Query: 237  HPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAP 296
            HP DDE NA LA LAPRFG+GVVATT AHFA P+R RL           S+D+AAGWLAP
Sbjct: 239  HPLDDENNAMLAGLAPRFGVGVVATTGAHFAHPARSRLAMAMGAIRARQSLDSAAGWLAP 298

Query: 297  LGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLR 354
            LGG HLRSG EMARLF   P+ V AAA+LGEQCAFGLALIAP+LPPFDVPDGHTEDSWLR
Sbjct: 299  LGGSHLRSGAEMARLFAQRPDVVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLR 358

Query: 355  HLAMAGAARRYGPPERAP---KAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILC 411
             L M+GA  RYG  ER+P   KAY QIEHEL++I QL FPGYFLVVHDITQFCR N+ILC
Sbjct: 359  SLVMSGARERYGSTERSPRARKAYTQIEHELKVIAQLSFPGYFLVVHDITQFCRRNDILC 418

Query: 412  QGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVY 471
            QGRGSAANSAVCYALGVT VDPIAN+LLFERFLSP RDGPPDIDIDIESD RE VIQYVY
Sbjct: 419  QGRGSAANSAVCYALGVTAVDPIANELLFERFLSPERDGPPDIDIDIESDQREKVIQYVY 478

Query: 472  ERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIP 531
             +YGRDYAAQVANVITYRGRSA+RDMARALGFSQGQQDAWSK +  W+  PD  DV  IP
Sbjct: 479  NKYGRDYAAQVANVITYRGRSAVRDMARALGFSQGQQDAWSKQIGHWNATPD--DVEGIP 536

Query: 532  EQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGL 591
            EQVI+LA QI NLPRHMGIHSGGMVICDRPIADVCPVEWARM +RSVLQWDKDDCAAIGL
Sbjct: 537  EQVIDLAAQIRNLPRHMGIHSGGMVICDRPIADVCPVEWARMADRSVLQWDKDDCAAIGL 596

Query: 592  VKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRA 651
            VKFD+LGLGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRA
Sbjct: 597  VKFDLLGLGMLSALHYARDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRA 656

Query: 652  QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKT 711
            QMATLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSME AL+KT
Sbjct: 657  QMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGIDPVVYEHPSMESALRKT 716

Query: 712  LGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITG 771
            LGVPLFQEQLMQLAVDCAGFSAAEADQLRRA+GSKRST +MRRLR RFYDGMR  HG   
Sbjct: 717  LGVPLFQEQLMQLAVDCAGFSAAEADQLRRAIGSKRSTERMRRLRGRFYDGMRALHGAPD 776

Query: 772  VVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ 831
             V DRIYEKLEAFANFGFPESH+LSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ
Sbjct: 777  EVIDRIYEKLEAFANFGFPESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ 836

Query: 832  SLVADARRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANG 891
            SLVADARRHGV VHGPDVNASLAHA LEN G+ VRLGLG+VRHIGDDLA+ +V ER  NG
Sbjct: 837  SLVADARRHGVLVHGPDVNASLAHATLENAGMQVRLGLGAVRHIGDDLAESLVAERNDNG 896

Query: 892  QFTSLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSST 951
             F SLL+LTSRVQL+VPQTEALATAGALGCFG++RRE LWAAGAAATQRPDRLPGVGSS+
Sbjct: 897  PFASLLNLTSRVQLSVPQTEALATAGALGCFGMSRREALWAAGAAATQRPDRLPGVGSSS 956

Query: 952  HIPPLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVA 1011
            HIP LPGMS LEL+A+DVWATGISPDSYPT++LR  LD+LGV+    LL V DG R+L+A
Sbjct: 957  HIPTLPGMSELELAASDVWATGISPDSYPTQFLRADLDALGVLAAAALLSVPDGERVLIA 1016

Query: 1012 GAVTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATG 1071
            GAVTHRQRPATAQGVTFINLEDE GMVNVLC PGVW R+RK+A TAPAL++RG VQNA+G
Sbjct: 1017 GAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWVRHRKLANTAPALLIRGQVQNASG 1076

Query: 1072 AVTVVADRMDAVNLRVGSRSRDFR 1095
            AVTVVA+RM  ++L VGSRSRDFR
Sbjct: 1077 AVTVVAERMGRISLAVGSRSRDFR 1100


>tr|A5WSU2|A5WSU2_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase III
            alpha subunit dnaE2 (DNA
            nucleotidyltransferase);[Mycobacterium tuberculosis]
          Length = 1079

 Score = 1754 bits (4543), Expect = 0.0
 Identities = 878/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|A5U844|A5U844_MYCTA Tax_Id=419947 (dnaE2)SubName: Full=DNA
            polymerase III subunit alpha DnaE2;[Mycobacterium
            tuberculosis]
          Length = 1079

 Score = 1754 bits (4543), Expect = 0.0
 Identities = 878/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|D6FS66|D6FS66_MYCTU Tax_Id=611304 SubName: Full=DNA polymerase
            subunit III alpha dnaE2;[Mycobacterium tuberculosis K85]
          Length = 1079

 Score = 1754 bits (4543), Expect = 0.0
 Identities = 878/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|D6FLT7|D6FLT7_MYCTU Tax_Id=611303 SubName: Full=DNA polymerase
            subunit III alpha dnaE2;[Mycobacterium tuberculosis
            CPHL_A]
          Length = 1079

 Score = 1754 bits (4543), Expect = 0.0
 Identities = 878/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|D6FA42|D6FA42_MYCTU Tax_Id=611302 SubName: Full=DNA polymerase
            subunit III alpha dnaE2;[Mycobacterium tuberculosis T46]
          Length = 1079

 Score = 1754 bits (4543), Expect = 0.0
 Identities = 878/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|D5ZLQ9|D5ZLQ9_MYCTU Tax_Id=537210 SubName: Full=DNA polymerase
            subunit III alpha dnaE2;[Mycobacterium tuberculosis T17]
          Length = 1079

 Score = 1754 bits (4543), Expect = 0.0
 Identities = 878/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|C1AHI6|C1AHI6_MYCBT Tax_Id=561275 (dnaE2)SubName: Full=Error-prone
            DNA polymerase; EC=2.7.7.7;[Mycobacterium bovis]
          Length = 1079

 Score = 1752 bits (4538), Expect = 0.0
 Identities = 877/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI +LPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRSLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|A1KP63|A1KP63_MYCBP Tax_Id=410289 (dnaE2)SubName: Full=Probable
            dna polymerase III (Alpha chain) dnaE2;
            EC=2.7.7.7;[Mycobacterium bovis]
          Length = 1079

 Score = 1752 bits (4538), Expect = 0.0
 Identities = 877/1085 (80%), Positives = 952/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG HLRSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHLRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI +LPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRSLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|A2VPF9|A2VPF9_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase III
            (Alpha chain) dnaE2 (DNA
            nucleotidyltransferase);[Mycobacterium tuberculosis C]
          Length = 1079

 Score = 1741 bits (4510), Expect = 0.0
 Identities = 872/1085 (80%), Positives = 947/1085 (87%), Gaps = 8/1085 (0%)

Query: 13   MERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYS 72
            MERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++ YAELHAHSAYS
Sbjct: 1    MERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSVAYAELHAHSAYS 56

Query: 73   FLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVA 132
            FLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV TVFGAELSL   A
Sbjct: 57   FLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRTVFGAELSLGATA 116

Query: 133  RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHIL 192
            RTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGHWHIL
Sbjct: 117  RTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDALTEAAGGHWHIL 176

Query: 193  TGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAP 252
            TGCRKGHV QAL   GP          VD F    VSIELTHHGHP DDERNAALA LAP
Sbjct: 177  TGCRKGHVAQALPQSGPTADAAALPDLVDPFTPSAVSIELTHHGHPLDDERNAALAGLAP 236

Query: 253  RFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLF 312
            RFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG H+RSGEEMARLF
Sbjct: 237  RFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGAHVRSGEEMARLF 296

Query: 313  D--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPER 370
               PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ 
Sbjct: 297  AWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKS 356

Query: 371  APKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTN 430
            AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT 
Sbjct: 357  APRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTA 416

Query: 431  VDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRG 490
            VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRG
Sbjct: 417  VDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRG 476

Query: 491  RSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGI 550
            RSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GI
Sbjct: 477  RSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGI 534

Query: 551  HSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAID 610
            HSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA D
Sbjct: 535  HSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKD 594

Query: 611  LVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVE 670
            LVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVE
Sbjct: 595  LVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVE 654

Query: 671  VALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAG 730
            VALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAG
Sbjct: 655  VALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAG 714

Query: 731  FSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFP 790
            FSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFP
Sbjct: 715  FSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFP 774

Query: 791  ESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVN 850
            ESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VN
Sbjct: 775  ESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVN 834

Query: 851  ASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQT 910
            ASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ 
Sbjct: 835  ASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQV 894

Query: 911  EALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVW 970
            EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVW
Sbjct: 895  EALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVW 954

Query: 971  ATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFIN 1030
            ATG+SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFIN
Sbjct: 955  ATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFIN 1014

Query: 1031 LEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSR 1090
            LEDE GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+R
Sbjct: 1015 LEDETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGAR 1074

Query: 1091 SRDFR 1095
            SRDFR
Sbjct: 1075 SRDFR 1079


>tr|A0PMI1|A0PMI1_MYCUA Tax_Id=362242 (dnaE2)SubName: Full=DNA
            polymerase III, alpha chain, DnaE2;[Mycobacterium
            ulcerans]
          Length = 1088

 Score = 1721 bits (4457), Expect = 0.0
 Identities = 872/1092 (79%), Positives = 938/1092 (85%), Gaps = 13/1092 (1%)

Query: 13   MERVLTSKPRRSGLPLESPGD----GGDSPAWSRKRGAYEPPDQARMPASALPYAELHAH 68
            MERVL  KPR +G+P ++ G     G D P  SRKR  Y P   A    S++ YAELHAH
Sbjct: 1    MERVLDGKPRHAGVP-DAAGPTAEAGWDGPL-SRKRETYAPKPDANRVDSSIAYAELHAH 58

Query: 69   SAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSL 128
            SAYSFLDGASTPEELVEEAARL+LRA+ALTDH+GLYG VRFAEAA  L V TVFGAELSL
Sbjct: 59   SAYSFLDGASTPEELVEEAARLDLRALALTDHNGLYGAVRFAEAASGLGVRTVFGAELSL 118

Query: 129  SNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGH 188
               ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD LTEAAGGH
Sbjct: 119  GPEARTEQPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDSLTEAAGGH 178

Query: 189  WHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALA 248
            WHILTGCRKGHVRQAL  GGP          VDRF A RVS+ELTHHGHP DDE NA LA
Sbjct: 179  WHILTGCRKGHVRQALRQGGPDAAERVLADLVDRFTAGRVSVELTHHGHPLDDENNAMLA 238

Query: 249  ELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEM 308
             LAPRFG+GVVATT AHFA P+R RL           S+D+AAGWLAPLGG HLRSG EM
Sbjct: 239  GLAPRFGVGVVATTGAHFAHPARSRLAMAMGAIRARQSLDSAAGWLAPLGGSHLRSGAEM 298

Query: 309  ARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYG 366
            ARLF   P+ V AAA+LGEQCAFGLALIAP+LPPFDVPDGHTEDSWLR L M+GA  RYG
Sbjct: 299  ARLFAQRPDVVTAAAELGEQCAFGLALIAPRLPPFDVPDGHTEDSWLRSLVMSGARERYG 358

Query: 367  PPERAP---KAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVC 423
              ER+P   KAYAQIEHEL++I QL FPGYFLVVHDITQFCR N+ILCQGRGSAANSAVC
Sbjct: 359  STERSPRARKAYAQIEHELKVIAQLSFPGYFLVVHDITQFCRRNDILCQGRGSAANSAVC 418

Query: 424  YALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVA 483
            YALGVT VDPIAN+LLFERFLSP RDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVA
Sbjct: 419  YALGVTAVDPIANELLFERFLSPERDGPPDIDIDIESDQREKVIQYVYNKYGRDYAAQVA 478

Query: 484  NVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIAN 543
            NVITYRGRSA+RDMARALGFSQGQQDAWSK +  W+   D  DV  IPEQVI+LA QI N
Sbjct: 479  NVITYRGRSAVRDMARALGFSQGQQDAWSKQIGHWNATLD--DVEGIPEQVIDLAAQIRN 536

Query: 544  LPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLS 603
            LPRHMGIHSGGMVICDRPIADVCPVEWARM +RSVLQWDKDDCAAIGLVKFD+LGLGMLS
Sbjct: 537  LPRHMGIHSGGMVICDRPIADVCPVEWARMADRSVLQWDKDDCAAIGLVKFDLLGLGMLS 596

Query: 604  ALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPRE 663
            ALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR 
Sbjct: 597  ALHYARDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRV 656

Query: 664  FYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQ 723
            FYDLVVEVALIRPGPIQGGSVHPYI+RR+G +PV Y+HPSME AL+KTLGVPLFQEQLMQ
Sbjct: 657  FYDLVVEVALIRPGPIQGGSVHPYIRRRSGIDPVVYEHPSMESALRKTLGVPLFQEQLMQ 716

Query: 724  LAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEA 783
            LAVDCAGFSAAEADQLRRA+GSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEA
Sbjct: 717  LAVDCAGFSAAEADQLRRAIGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEA 776

Query: 784  FANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVT 843
            FANFGFPESH+LSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV 
Sbjct: 777  FANFGFPESHALSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVL 836

Query: 844  VHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRV 903
            VHGPDVNASLAHA LEN G+ VRLGLG+VRHIGDDLA+ +V ER  NG F SLL+LTSRV
Sbjct: 837  VHGPDVNASLAHATLENAGMQVRLGLGAVRHIGDDLAESLVAERNDNGPFASLLNLTSRV 896

Query: 904  QLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALE 963
            QL+VPQTEALAT GALGCFG++RRE LWAAGAAATQRPDRLPGVGSS+HIP LPGMS LE
Sbjct: 897  QLSVPQTEALATTGALGCFGMSRREALWAAGAAATQRPDRLPGVGSSSHIPTLPGMSELE 956

Query: 964  LSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATA 1023
            L+A+DVWATGISPDSYPT++LR  LD+LGV+    LL V DG R+L+AGAVTHRQRPATA
Sbjct: 957  LAASDVWATGISPDSYPTQFLRADLDALGVLAAAALLSVPDGERVLIAGAVTHRQRPATA 1016

Query: 1024 QGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAV 1083
            QGVTFINLEDE GMVNVLC PGVW R+RK+A TAP L++RG VQNA+ AVTVVA+RM  +
Sbjct: 1017 QGVTFINLEDETGMVNVLCTPGVWMRHRKLANTAPVLLIRGQVQNASSAVTVVAERMGRI 1076

Query: 1084 NLRVGSRSRDFR 1095
            +L VGSRSRDFR
Sbjct: 1077 SLAVGSRSRDFR 1088


>tr|D5PQX7|D5PQX7_COREQ Tax_Id=525370 (dnaE2)SubName:
            Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Rhodococcus
            equi ATCC 33707]
          Length = 1115

 Score = 1664 bits (4309), Expect = 0.0
 Identities = 835/1097 (76%), Positives = 911/1097 (83%), Gaps = 6/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW +GPP+W+EMERVL+ +PR      + PGDGGDSPAWSRKRGAY      R   + +
Sbjct: 23   MGWGHGPPTWAEMERVLSGRPRHES---QFPGDGGDSPAWSRKRGAYLADGAVRPVGATV 79

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELH HSA+SFLDGAS PEELVEEA RL L AIALTDHDG+YGVVRFAEAA+EL + T
Sbjct: 80   PYAELHTHSAFSFLDGASPPEELVEEAVRLGLDAIALTDHDGMYGVVRFAEAAKELGMRT 139

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL    RT  PDP G HLLVLARG EGYRRLSR+IA AHLAGGEKG+PRYD+D 
Sbjct: 140  VFGAELSLDATPRTGTPDPGGTHLLVLARGQEGYRRLSRQIAAAHLAGGEKGKPRYDYDA 199

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHW ILTGCRKGHVR AL+ GGP          VDRFGADRV++ELTH G P D
Sbjct: 200  LTEAAGGHWQILTGCRKGHVRSALAAGGPDAAEAALRDLVDRFGADRVTVELTHRGLPED 259

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DE NAALAE+A R  L V+A+TAAHFA P R RL           S+D AAGWLAP GG 
Sbjct: 260  DEINAALAEIATRQQLPVIASTAAHFAGPHRRRLAMAMAAVRARQSLDEAAGWLAPTGGA 319

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSG EM RLF   PE VA AA LG +CAF L LIAP+LPPFDVPDGHTE SWLR L M
Sbjct: 320  HLRSGAEMVRLFAQCPEAVAGAAALGLECAFDLRLIAPKLPPFDVPDGHTEASWLRELTM 379

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
             GA RRYGPP   P AYAQIEHEL IIE+L FPGYFLVVHDI  FC+ N+ILCQGRGSAA
Sbjct: 380  QGARRRYGPPSANPAAYAQIEHELDIIERLTFPGYFLVVHDIVSFCKGNDILCQGRGSAA 439

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYA+G+TNVDP+ N LLFERFLSP RDGPPDID+DIESD RE  IQ+VY +YGR+Y
Sbjct: 440  NSAVCYAIGITNVDPVRNKLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYTKYGREY 499

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRG+S++RDMARALGFSQGQQDAWSK +SRW G     D  +IP  V+ELA
Sbjct: 500  AAQVANVITYRGKSSVRDMARALGFSQGQQDAWSKQVSRWTGVGQETDT-DIPPAVLELA 558

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI   PRH+GIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAA+GLVKFD+LG
Sbjct: 559  AQIEGFPRHLGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAVGLVKFDLLG 618

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHY IDLVAEHKGIEVDLA LDLSE AVYEMLQRADSVGVFQVESRAQMATLPR
Sbjct: 619  LGMLSALHYMIDLVAEHKGIEVDLAQLDLSEQAVYEMLQRADSVGVFQVESRAQMATLPR 678

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG+EPV YDHP +E AL +TLGVPLFQ
Sbjct: 679  LKPRNFYDLVVEVALIRPGPIQGGSVHPYIRRRNGREPVVYDHPCLEKALARTLGVPLFQ 738

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQ+AVD AGFSAAEADQLRRAMGSKRS  KM RLR R YDGMRE HGITG VADRIY
Sbjct: 739  EQLMQMAVDAAGFSAAEADQLRRAMGSKRSPEKMERLRGRLYDGMRELHGITGDVADRIY 798

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKL AFANFGFPESHS SFASLVFYSSWFKLHHPAAFCA LLRAQPMGFYSPQSLVADAR
Sbjct: 799  EKLHAFANFGFPESHSQSFASLVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADAR 858

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHG DVNASLAHA LE  G +VRLGLG VR IGD LA RIV  R  +G F S+LD
Sbjct: 859  RHGVRVHGADVNASLAHATLEACGTEVRLGLGEVRGIGDALADRIVAARAEDGPFRSILD 918

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LT R+ LT  Q E+LATAGAL CFG++RRE LWAAGAAA +RPDRLPG+G+ST  P LPG
Sbjct: 919  LTGRIDLTTGQVESLATAGALSCFGLSRREALWAAGAAAGERPDRLPGMGASTRAPALPG 978

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPDSYPTE+LR  LD+LGV+P  RLLDV DG R+LV GAVTHRQ
Sbjct: 979  MSDLELAAADVWATGVSPDSYPTEFLRPQLDALGVLPASRLLDVPDGDRVLVGGAVTHRQ 1038

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATA GVTF+NLEDE GMVNV+C+ G+W+RYRK+A +APAL+VRG VQNA GAVTVVAD
Sbjct: 1039 RPATAAGVTFVNLEDETGMVNVVCSVGLWARYRKLATSAPALLVRGKVQNAEGAVTVVAD 1098

Query: 1079 RMDAVNLRVGSRSRDFR 1095
             +  ++LR+ SRSRDFR
Sbjct: 1099 HLQLMDLRMASRSRDFR 1115


>tr|C0ZWF2|C0ZWF2_RHOE4 Tax_Id=234621 (dnaE2)SubName: Full=Error-prone
            DNA polymerase; EC=2.7.7.7;[Rhodococcus erythropolis]
          Length = 1095

 Score = 1628 bits (4215), Expect = 0.0
 Identities = 815/1097 (74%), Positives = 905/1097 (82%), Gaps = 4/1097 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW NGPP+WSEMERVL+ +P R       PGDG DSPAWSRKRG Y   +  R     +
Sbjct: 1    MGWGNGPPTWSEMERVLSGRPGRVEHEDLFPGDGSDSPAWSRKRGEYHAGELTR-GTGVV 59

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELHAHSA+SFLDGAS PEELVEEA RL L AIA+TDHDG YGVVRFAEAARE  + T
Sbjct: 60   PYAELHAHSAFSFLDGASPPEELVEEAVRLGLEAIAVTDHDGFYGVVRFAEAAREWGMRT 119

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFGAELSL +V RT   DP G HLLVLARG EGYRRLSREIA AHLAGGEKG+ +Y++D 
Sbjct: 120  VFGAELSLDSVPRTGTADPGGTHLLVLARGQEGYRRLSREIAAAHLAGGEKGKLQYNYDV 179

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LTEAAGGHW ILTGCRKGHVRQAL+ GG           V+RFGA+RVS+ELTHHG   D
Sbjct: 180  LTEAAGGHWQILTGCRKGHVRQALTSGGREAAAEALQDLVERFGAERVSVELTHHGLAED 239

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
            DERNA LAELA   GL  VATTAAHFA P R RL           S+D AAGWLAP GG 
Sbjct: 240  DERNAVLAELARERGLRTVATTAAHFAAPPRRRLAMAMAAVRARQSLDEAAGWLAPTGGA 299

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSG EMA LF   PE V+ AADLG +CAF L LIAP+LPPFDVP GHTE SWLR L M
Sbjct: 300  HLRSGAEMATLFSLYPEAVSGAADLGRECAFDLKLIAPKLPPFDVPAGHTEASWLRELTM 359

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
             GA  RYGPPE APKAY Q+EHEL IIE L FPGYFLVVHDI  FC++N+ILCQGRGSAA
Sbjct: 360  VGALERYGPPEGAPKAYKQLEHELAIIEGLNFPGYFLVVHDIVSFCKNNDILCQGRGSAA 419

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYA+G+TNVDP+ N LLFERFL+P RDGPPDID+DIESD RE  IQ+VY +YGR Y
Sbjct: 420  NSAVCYAIGITNVDPVRNKLLFERFLAPERDGPPDIDVDIESDRREEAIQHVYAKYGRTY 479

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRG+S++RDMARALGFSQGQQDAWSK + RW G   + D  +IP  V+ELA
Sbjct: 480  AAQVANVITYRGKSSVRDMARALGFSQGQQDAWSKQVGRWGGIDKNADT-DIPRPVLELA 538

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI   PRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAA GLVKFD+LG
Sbjct: 539  AQIEGYPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAAGLVKFDLLG 598

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHY +DLVAEHKGI VDLA LDLSE AVYEMLQRADSVGVFQVESRAQMATLPR
Sbjct: 599  LGMLSALHYMMDLVAEHKGITVDLAQLDLSETAVYEMLQRADSVGVFQVESRAQMATLPR 658

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRN  EPV+YDHPS+E AL++TLGVPLFQ
Sbjct: 659  LKPRNFYDLVVEVALIRPGPIQGGSVHPYIRRRNKLEPVSYDHPSLEKALERTLGVPLFQ 718

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQ+AVD AGF+ +EADQLRRAMGSKRST KM +LR+R Y GMR+ HGI   VADRIY
Sbjct: 719  EQLMQMAVDVAGFTPSEADQLRRAMGSKRSTEKMEQLRARLYQGMRDLHGIGDEVADRIY 778

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKL AFANFGFPESHS SFA+LVFYSSWFKLHHPAAFCA LLRAQPMGFYSPQSLVADAR
Sbjct: 779  EKLYAFANFGFPESHSQSFAALVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADAR 838

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHG D+N SLAHA +E  G +VRLGLG VR+IGD LA++IV++R+  G FTS LD
Sbjct: 839  RHGVQVHGADINVSLAHATVEAGGFEVRLGLGEVRNIGDALAEKIVEQRDLGGPFTSFLD 898

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LT RV+LT  Q E+LATAGAL  FGI+RRE LWAAGAAA +RPDRLPG+G+S   P LPG
Sbjct: 899  LTGRVELTTAQAESLATAGALASFGISRREALWAAGAAAGERPDRLPGIGASVTAPTLPG 958

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS +EL+AADVWATG+SPD+YPT++LR  LD+LGVVP  RLLD+ DG R+LV GAVTHRQ
Sbjct: 959  MSDVELAAADVWATGVSPDTYPTQFLRPQLDALGVVPASRLLDIPDGDRVLVGGAVTHRQ 1018

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATA GVTFINLEDE GMVNV+C+ G+W++YRK+A TAPAL++RG VQNA GAVTVVAD
Sbjct: 1019 RPATAAGVTFINLEDETGMVNVVCSVGLWAKYRKLANTAPALLIRGKVQNAEGAVTVVAD 1078

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            RM  ++LRV ++SRDFR
Sbjct: 1079 RMQLMDLRVTAKSRDFR 1095


>tr|C1B138|C1B138_RHOOB Tax_Id=632772 (dnaE2)SubName: Full=Error-prone
            DNA polymerase; EC=2.7.7.7;[Rhodococcus opacus]
          Length = 1084

 Score = 1626 bits (4211), Expect = 0.0
 Identities = 824/1097 (75%), Positives = 901/1097 (82%), Gaps = 15/1097 (1%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW NGPP+WSEMERVL+ +P R       PGDGGDSPAWSRKRG Y    Q R   S +
Sbjct: 1    MGWGNGPPTWSEMERVLSGRPGRVDPESLYPGDGGDSPAWSRKRGEYRAGRQERS-GSTV 59

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELHAHSA+SFLDGAS PEELVEEA RL L AIALTDHDG YGVVRFAEAA+EL++ T
Sbjct: 60   PYAELHAHSAFSFLDGASPPEELVEEAVRLGLEAIALTDHDGFYGVVRFAEAAKELNMRT 119

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
            VFG+ELSL +            HLLVLARG EGYRRLSREIA AHLAGGEKGR RYD D+
Sbjct: 120  VFGSELSLDDA-----------HLLVLARGQEGYRRLSREIAAAHLAGGEKGRLRYDLDR 168

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            L +AAGGHW ILTGCRKGHVRQAL+DGGP          +DRFGADRV++ELTHHG   D
Sbjct: 169  LADAAGGHWQILTGCRKGHVRQALADGGPDAAAARLRDLIDRFGADRVTVELTHHGVAED 228

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
             ERNA LAELA R GL V+A+TAAHFA P R RL           S+D AAG+LAP GG 
Sbjct: 229  AERNACLAELAQRHGLRVIASTAAHFAGPPRRRLAMAMAAVRARQSLDDAAGYLAPAGGA 288

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMA LF   P+ V  AA+LG +CAF L LIAPQLPPFDVPDGHTE SWLR L M
Sbjct: 289  HLRSGEEMAHLFAAYPDAVRGAAELGLECAFDLRLIAPQLPPFDVPDGHTEASWLRQLTM 348

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
             GA RRYG P   P+AY QIEHEL II  L FPGYFLVVHDI  FC++N+ILCQGRGSAA
Sbjct: 349  DGARRRYGAPADRPEAYRQIEHELGIITGLNFPGYFLVVHDIVSFCKNNDILCQGRGSAA 408

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYA+G+TNVDP+ N LLFERFLSP RDGPPDID+DIESD RE  IQ+VY +YGR Y
Sbjct: 409  NSAVCYAIGITNVDPVRNKLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYTKYGRQY 468

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRG+S++RDMARALGFSQGQQDAWSK +SRW G        +IP  V+ELA
Sbjct: 469  AAQVANVITYRGKSSVRDMARALGFSQGQQDAWSKQVSRWGGIGKEAGT-DIPPAVLELA 527

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI   PRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAA+GLVKFDMLG
Sbjct: 528  AQIEGFPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAVGLVKFDMLG 587

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHY IDLVAEHKGIEVDLA LDLSE AVYEMLQRADSVGVFQVESRAQMATLPR
Sbjct: 588  LGMLSALHYMIDLVAEHKGIEVDLAQLDLSEEAVYEMLQRADSVGVFQVESRAQMATLPR 647

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRN  EPVTYDHPS+E ALK+TLGVPLFQ
Sbjct: 648  LKPRNFYDLVVEVALIRPGPIQGGSVHPYIRRRNKLEPVTYDHPSLEKALKRTLGVPLFQ 707

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQ+AVD AGFS AEADQLRRAMGSKRS  KM RLR RFY GMRE HGI G VADRIY
Sbjct: 708  EQLMQMAVDVAGFSPAEADQLRRAMGSKRSPEKMERLRGRFYQGMRELHGIGGDVADRIY 767

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKL AFANFGFPESHS SFA+LVFYSSWFKLHHPAAFCA LLRAQPMGFYSPQSLVADAR
Sbjct: 768  EKLFAFANFGFPESHSQSFAALVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADAR 827

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHG DVNASLAHA +E  G +VRLGLG VRHIG  LA+RIVD R   G +TS LD
Sbjct: 828  RHGVRVHGADVNASLAHATVEAGGTEVRLGLGEVRHIGTALAERIVDSRGDGGPYTSFLD 887

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LT RV+L+  Q E+LATAGAL  FG++RRE LWAAGAAA +R DRLPG+G+ST  P LPG
Sbjct: 888  LTGRVELSTAQAESLATAGALDSFGLSRREALWAAGAAAGERRDRLPGIGASTRAPTLPG 947

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPD+YPTE+LR  LD+LGV+P   LLDV DG R+LV GAVTHRQ
Sbjct: 948  MSDLELAAADVWATGVSPDTYPTEFLRPQLDALGVIPAAHLLDVPDGDRVLVGGAVTHRQ 1007

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATA GVTFINLEDE GMVNV+C+ G+W++YRK+A TAPAL+VRG VQNA GAVTVVAD
Sbjct: 1008 RPATAAGVTFINLEDETGMVNVVCSVGLWAKYRKLANTAPALLVRGKVQNAEGAVTVVAD 1067

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            R+  ++LRV ++SRDFR
Sbjct: 1068 RLQLMDLRVSAKSRDFR 1084


>tr|D5YJZ7|D5YJZ7_MYCTU Tax_Id=520140 SubName: Full=DNA polymerase
           III, alpha subunit;[Mycobacterium tuberculosis EAS054]
          Length = 1005

 Score = 1618 bits (4191), Expect = 0.0
 Identities = 809/987 (81%), Positives = 867/987 (87%), Gaps = 8/987 (0%)

Query: 1   MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
           MGW NGPPSW+EMERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++
Sbjct: 1   MGWSNGPPSWAEMERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSV 56

Query: 61  PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            YAELHAHSAYSFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 57  AYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT 116

Query: 121 VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
           VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A AHLAGGEKG+PRYDFD 
Sbjct: 117 VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFDA 176

Query: 181 LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
           LTEAAGGHWHILTGCRKGHVRQALS GGP          VDRF   RVSIELTHHGHP D
Sbjct: 177 LTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHPLD 236

Query: 241 DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
           DERNAALA LAPRFG+G+VATT AHFA PSRGRL           S+D+AAGWLAPLGG 
Sbjct: 237 DERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPLGGA 296

Query: 301 HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
           HLRSGEEMARLF   PE V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L M
Sbjct: 297 HLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVM 356

Query: 359 AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
           AGA  RYGPP+ AP+AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAA
Sbjct: 357 AGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAA 416

Query: 419 NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
           NSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDY
Sbjct: 417 NSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDY 476

Query: 479 AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
           AAQVANVITYRGRSA+RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA
Sbjct: 477 AAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLA 534

Query: 539 NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
            QI NLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LG
Sbjct: 535 TQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLG 594

Query: 599 LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
           LGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPR
Sbjct: 595 LGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPR 654

Query: 659 LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
           LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQ
Sbjct: 655 LKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQ 714

Query: 719 EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
           EQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIY
Sbjct: 715 EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIY 774

Query: 779 EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
           EKLEAFANFGFPESH+LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR
Sbjct: 775 EKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 834

Query: 839 RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
           RHGV VHGP VNASLAHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL D
Sbjct: 835 RHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPD 894

Query: 899 LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
           LTSRVQL+VPQ EALATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPG
Sbjct: 895 LTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPG 954

Query: 959 MSALELSAADVWATGISPDSYPTEYLR 985
           MS LEL+AADVWATG+SPDSYPT++LR
Sbjct: 955 MSELELAAADVWATGVSPDSYPTQFLR 981


>tr|Q0S382|Q0S382_RHOSR Tax_Id=101510 (dnaE2)SubName:
            Full=DNA-directed DNA polymerase alpha subunit (DNA
            polymerase III alpha subunit); EC=2.7.7.7;[Rhodococcus
            sp.]
          Length = 1084

 Score = 1617 bits (4186), Expect = 0.0
 Identities = 818/1097 (74%), Positives = 899/1097 (81%), Gaps = 15/1097 (1%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW NGPP+WSEMERVL+ +P R       PGDGGDSPAWSRKRG Y    Q R   S +
Sbjct: 1    MGWGNGPPTWSEMERVLSGRPGRVSPESLYPGDGGDSPAWSRKRGEYRAGPQERA-GSTV 59

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELHAHSA+SFLDGAS PEELVEEA RL L AIALTDHDG YGVVRFAEAA+EL++ T
Sbjct: 60   PYAELHAHSAFSFLDGASPPEELVEEAVRLGLEAIALTDHDGFYGVVRFAEAAKELNMRT 119

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQ 180
             FG+EL+L +            HLLVLARG EGYRRLSREIA AHLAGGEKG+ RYD D+
Sbjct: 120  AFGSELTLDDA-----------HLLVLARGQEGYRRLSREIAAAHLAGGEKGKLRYDLDR 168

Query: 181  LTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCD 240
            LT+AAGGHW ILTGCRKGHVRQAL+ GGP          +DRFGADRV++ELTHHG   D
Sbjct: 169  LTDAAGGHWQILTGCRKGHVRQALAAGGPDAAAARLRELIDRFGADRVTVELTHHGIAED 228

Query: 241  DERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGV 300
             ERNA+LAELA + GL V+A+TAAHFA P R RL           S+D AAG LAP GG 
Sbjct: 229  AERNASLAELAQQHGLPVIASTAAHFAGPPRRRLAMAMAAVRARQSLDDAAGHLAPAGGA 288

Query: 301  HLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAM 358
            HLRSGEEMA LF   PE V  AADLG +CAF L LIAPQLPPFDVPDGHTE SWLR L M
Sbjct: 289  HLRSGEEMAHLFAAYPEAVRGAADLGRECAFDLRLIAPQLPPFDVPDGHTEASWLRQLTM 348

Query: 359  AGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAA 418
             GA RRYG P   P+AY QIEHEL II  L FPGYFLVVHDI  FC++N+ILCQGRGSAA
Sbjct: 349  DGARRRYGAPADRPEAYRQIEHELDIITGLNFPGYFLVVHDIVSFCKNNDILCQGRGSAA 408

Query: 419  NSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDY 478
            NSAVCYA+G+TNVDP+ N LLFERFLSP RDGPPDID+DIESD RE  IQ+VY +YGR Y
Sbjct: 409  NSAVCYAIGITNVDPVRNKLLFERFLSPERDGPPDIDVDIESDRREEAIQHVYAKYGRQY 468

Query: 479  AAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELA 538
            AAQVANVITYRG+S++RDMARALGFSQGQQDAWSK +SRW G        +IP  V+ELA
Sbjct: 469  AAQVANVITYRGKSSVRDMARALGFSQGQQDAWSKQVSRWGGIGKEVGT-DIPPAVLELA 527

Query: 539  NQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLG 598
             QI   PRH+GIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAA+GLVKFDMLG
Sbjct: 528  AQIEGFPRHLGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAVGLVKFDMLG 587

Query: 599  LGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPR 658
            LGMLSALHY IDLVAEHKGIEVDLA LDLSE AVYEMLQRADSVGVFQVESRAQMATLPR
Sbjct: 588  LGMLSALHYMIDLVAEHKGIEVDLAQLDLSEEAVYEMLQRADSVGVFQVESRAQMATLPR 647

Query: 659  LKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQ 718
            LKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRN  EPVTYDHPS+E ALK+TLGVPLFQ
Sbjct: 648  LKPRNFYDLVVEVALIRPGPIQGGSVHPYIRRRNKLEPVTYDHPSLEKALKRTLGVPLFQ 707

Query: 719  EQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIY 778
            EQLMQ+AVD AGFS AEADQLRRAMGSKRS  KM RLR R Y GMRE HGI   VADRIY
Sbjct: 708  EQLMQMAVDVAGFSPAEADQLRRAMGSKRSPEKMERLRGRLYQGMRELHGIGDDVADRIY 767

Query: 779  EKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADAR 838
            EKL AFANFGFPESHS SFA+LVFYSSWFKLHHPAAFCA LLRAQPMGFYSPQSLVADAR
Sbjct: 768  EKLYAFANFGFPESHSQSFAALVFYSSWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADAR 827

Query: 839  RHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLD 898
            RHGV VHG D+NASLAHA +E  G +VRLGLG VRHIG  LA+RIV+ R   G +TS LD
Sbjct: 828  RHGVPVHGADINASLAHATVEAGGTEVRLGLGEVRHIGTALAERIVESRGDGGPYTSFLD 887

Query: 899  LTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPG 958
            LT RV+L+  Q E+LATAGAL  FG++RRE LWAAGAAA +R DRLPG+G+ST  P LPG
Sbjct: 888  LTGRVELSTAQAESLATAGALDSFGLSRREALWAAGAAAGERRDRLPGIGASTRAPTLPG 947

Query: 959  MSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQ 1018
            MS LEL+AADVWATG+SPD+YPT++LR  LD+LGV+P   LLDV DG R+LV GAVTHRQ
Sbjct: 948  MSDLELAAADVWATGVSPDTYPTQFLRPQLDALGVIPAAGLLDVPDGDRVLVGGAVTHRQ 1007

Query: 1019 RPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVAD 1078
            RPATA GVTFINLEDE GMVNV+C+ G+W++YRK+A TAPAL+VRG VQNA GAVTVVAD
Sbjct: 1008 RPATAAGVTFINLEDETGMVNVVCSVGLWAKYRKLANTAPALLVRGKVQNAEGAVTVVAD 1067

Query: 1079 RMDAVNLRVGSRSRDFR 1095
            R+  ++LRV ++SRDFR
Sbjct: 1068 RLQLMDLRVSAKSRDFR 1084


>tr|A4KLQ9|A4KLQ9_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase III
            (Alpha chain) dnaE2 (DNA
            nucleotidyltransferase);[Mycobacterium tuberculosis str.
            Haarlem]
          Length = 1090

 Score = 1615 bits (4183), Expect = 0.0
 Identities = 833/1116 (74%), Positives = 909/1116 (81%), Gaps = 47/1116 (4%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW NGPPSW+EMERVL  KPR +G+P       GD P  SRKRGAY+PP + R+  S++
Sbjct: 1    MGWSNGPPSWAEMERVLNGKPRHAGVPAFDAD--GDVPR-SRKRGAYQPPGRERV-GSSV 56

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
             YAELHAHSAYSFLDGASTPEELVEEAARL L A+ALTDHDGLYG VRFAEAA ELDV T
Sbjct: 57   AYAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT 116

Query: 121  VFGAELSLSNVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKA-----------HLAGG 169
            VFGAELSL   ARTE PDPPGPHLLVLARGPEGYRRLSR++A              L   
Sbjct: 117  VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAARIWPAAKRVSALRLRRA 176

Query: 170  EKGRPRYDFDQLTEAAGGHWHILTGCRKGH--------VRQALSDGGPXXXXXXXXXXVD 221
             +GR R         A   W     C               A   GGP            
Sbjct: 177  NRGRRR-------ALAHPDWLPQRPCAPSAFPGWPGRGAAGAGRSGGPVHPQP------- 222

Query: 222  RFGADRVSIELTHHGHPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXX 281
              G  R     +    P            APRFG+G+VATT AHFA PSRGRL       
Sbjct: 223  --GQHRADPSWS----PARRRTQRRAGRTAPRFGVGIVATTGAHFADPSRGRLAMAMAAI 276

Query: 282  XXXNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLP 339
                S+D+AAGWLAPLGG HLRSGEEMARLF   PE V AAA+LGE+CAFGL LIAP+LP
Sbjct: 277  RARRSLDSAAGWLAPLGGAHLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLP 336

Query: 340  PFDVPDGHTEDSWLRHLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHD 399
            PFDVPDGHTEDSWLR L MAGA  RYGPP+ AP+AY+QIEHEL++I QLRFPGYFLVVHD
Sbjct: 337  PFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHD 396

Query: 400  ITQFCRDNNILCQGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIE 459
            IT+FCRDN+ILCQGRGSAANSAVCYALGVT VDP+AN+LLFERFLSPARDGPPDIDIDIE
Sbjct: 397  ITRFCRDNDILCQGRGSAANSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIE 456

Query: 460  SDLRENVIQYVYERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWD 519
            SD RE VIQYVY +YGRDYAAQVANVITYRGRSA+RDMARALGFS GQQDAWSK +S W 
Sbjct: 457  SDQREKVIQYVYHKYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWT 516

Query: 520  GRPDSPDVAEIPEQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVL 579
            G+ D  DV  IPEQVI+LA QI NLPRH+GIHSGGMVICDRPIADVCPVEWARM NRSVL
Sbjct: 517  GQAD--DVDGIPEQVIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVL 574

Query: 580  QWDKDDCAAIGLVKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRA 639
            QWDKDDCAAIGLVKFD+LGLGMLSALHYA DLVAEHKGIEVDLA LDLSEPAVYEML RA
Sbjct: 575  QWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARA 634

Query: 640  DSVGVFQVESRAQMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTY 699
            DSVGVFQVESRAQMATLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNG +PV Y
Sbjct: 635  DSVGVFQVESRAQMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIY 694

Query: 700  DHPSMEPALKKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRF 759
            +HPSM PAL+KTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRST +MRRLR RF
Sbjct: 695  EHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRF 754

Query: 760  YDGMRERHGITGVVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAAL 819
            YDGMR  HG    V DRIYEKLEAFANFGFPESH+LSFASLVFYS+WFKLHHPAAFCAAL
Sbjct: 755  YDGMRALHGAPDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAAL 814

Query: 820  LRAQPMGFYSPQSLVADARRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDL 879
            LRAQPMGFYSPQSLVADARRHGV VHGP VNASLAHA  EN G +VRLGLG+VR++G +L
Sbjct: 815  LRAQPMGFYSPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAEL 874

Query: 880  AQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQ 939
            A+++V ER ANG FTSL DLTSRVQL+VPQ EALATAGALGCFG++RRE LWAAGAAAT 
Sbjct: 875  AEKLVAERTANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATG 934

Query: 940  RPDRLPGVGSSTHIPPLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRL 999
            RPDRLPGVGSS+HIP LPGMS LEL+AADVWATG+SPDSYPT++LR  LD++GV+P +RL
Sbjct: 935  RPDRLPGVGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERL 994

Query: 1000 LDVADGTRILVAGAVTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPA 1059
              V+DG R+L+AGAVTHRQRPATAQGVTFINLEDE GMVNVLC PGVW+R+RK+A TAPA
Sbjct: 995  GSVSDGDRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPA 1054

Query: 1060 LIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRDFR 1095
            L++RG VQNA+GA+TVVA+RM  + L VG+RSRDFR
Sbjct: 1055 LLIRGQVQNASGAITVVAERMGRLTLAVGARSRDFR 1090


>tr|B1MG32|B1MG32_MYCA9 Tax_Id=561007 SubName: Full=Error-prone DNA
            polymerase;[Mycobacterium abscessus]
          Length = 1078

 Score = 1606 bits (4158), Expect = 0.0
 Identities = 809/1076 (75%), Positives = 897/1076 (83%), Gaps = 12/1076 (1%)

Query: 27   PLESPGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYSFLDGASTPEELVEE 86
            P   PGDGGD PAWSRKR  YEPP + R   S +PYAELHAHSA+SFLDGAS PEE+V+E
Sbjct: 8    PHAPPGDGGDGPAWSRKRQPYEPPPRER-GRSVVPYAELHAHSAFSFLDGASLPEEMVQE 66

Query: 87   AARLNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVARTEDPDPPGPHLLV 146
            AARL+L+A+A+TDHDG YGVVRFAEAA+EL + TVFGAELSL     TED      HLLV
Sbjct: 67   AARLDLKALAITDHDGFYGVVRFAEAAKELGLPTVFGAELSLGGQGNTED----SVHLLV 122

Query: 147  LARGPEGYRRLSREIAKAHLAGG----EKGRPRYDFDQLTEAAGGHWHILTGCRKGHVRQ 202
            LARG EGYRRLSR++A AHL+GG     KG+PRYD D LTEAAGGHWHILTGCRKGHVR+
Sbjct: 123  LARGQEGYRRLSRQMAGAHLSGGTPKDRKGKPRYDLDALTEAAGGHWHILTGCRKGHVRR 182

Query: 203  ALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAPRFGLGVVATT 262
            AL+ GGP          VDRFGADRVSIEL  HGHP +DERNA LA LA  FG+GV+ATT
Sbjct: 183  ALAGGGPVAAERALANLVDRFGADRVSIELNRHGHPGEDERNAELAALARGFGVGVIATT 242

Query: 263  AAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEFVAAA 320
            AAHFATP  GRL           S+D AAGWL P+GG HLRSG+EMARLF   PE V AA
Sbjct: 243  AAHFATPESGRLAMAMAAVRARKSLDDAAGWLDPVGGAHLRSGDEMARLFSHYPEVVTAA 302

Query: 321  ADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPERAPKAYAQIEH 380
            A+LGE+CAF L LIAPQLPPFDVP GHTEDSWLRHLA+ GAARRYGP   A KAYAQIE 
Sbjct: 303  AELGEECAFDLRLIAPQLPPFDVPSGHTEDSWLRHLALEGAARRYGPRAGAQKAYAQIER 362

Query: 381  ELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTNVDPIANDLLF 440
            EL II QL FPGYFLVVHDITQFCR ++ILCQGRGSAANSAVCYALGVTNVDP+ N LLF
Sbjct: 363  ELEIIAQLNFPGYFLVVHDITQFCRRSDILCQGRGSAANSAVCYALGVTNVDPVDNGLLF 422

Query: 441  ERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRGRSAIRDMARA 500
            ERFLSPARDGPPDIDIDIESD RE  IQYVY +YGR+YAAQVANVITYRGR A+RDMA+A
Sbjct: 423  ERFLSPARDGPPDIDIDIESDEREQAIQYVYNKYGREYAAQVANVITYRGRMAVRDMAKA 482

Query: 501  LGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGIHSGGMVICDR 560
            LGF+QGQQDAWSK +  W G  D+  V  IP QVI+LA QI + PRHMGIHSGGMVICDR
Sbjct: 483  LGFAQGQQDAWSKQMGHWGGLADAAAVDGIPPQVIQLARQIKDFPRHMGIHSGGMVICDR 542

Query: 561  PIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAIDLVAEHKGIEV 620
            P+ADV PVEWARMENRSVLQWDKDDCAA+GLVKFD+LGLGMLSALHY IDLV EHKGI+V
Sbjct: 543  PLADVVPVEWARMENRSVLQWDKDDCAAVGLVKFDLLGLGMLSALHYCIDLVREHKGIDV 602

Query: 621  DLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVEVALIRPGPIQ 680
            DLA ++L E AVYEML RADSVGVFQVESRAQMATLPRLKP+ FYDLVVEVALIRPGPIQ
Sbjct: 603  DLAHINLKEQAVYEMLARADSVGVFQVESRAQMATLPRLKPKCFYDLVVEVALIRPGPIQ 662

Query: 681  GGSVHPYIKRRNG-QEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAGFSAAEADQL 739
            GGSVHPYI+R N   +   +DHPSM  AL KTLGVPLFQEQLMQLAVD AGFS AE+DQL
Sbjct: 663  GGSVHPYIRRYNKIDKDWQHDHPSMAAALDKTLGVPLFQEQLMQLAVDVAGFSPAESDQL 722

Query: 740  RRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFPESHSLSFAS 799
            RRAMGSKRS  +M RLR+RFY+GMR  HGITG +ADRIYEKL AFANFGFPESH+ SFAS
Sbjct: 723  RRAMGSKRSPERMERLRNRFYEGMRNLHGITGELADRIYEKLYAFANFGFPESHAQSFAS 782

Query: 800  LVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASLAHAGLE 859
            LVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASL++A LE
Sbjct: 783  LVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASLSYATLE 842

Query: 860  NRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATAGAL 919
            N GL+VR+GLG+VRHIGDDLAQ IV+ER+  G F SLLDLT R+QLT  Q EALAT GAL
Sbjct: 843  NAGLEVRIGLGAVRHIGDDLAQAIVEERKVRGPFVSLLDLTGRIQLTTAQVEALATGGAL 902

Query: 920  GCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVWATGISPDSY 979
            GCF ++RRE LW AGAAA QRPDRLPGVG S+ IP LP M  +  +AADVWATG+SPDSY
Sbjct: 903  GCFDMSRREALWVAGAAAAQRPDRLPGVGVSSRIPALPEMGEVTRAAADVWATGVSPDSY 962

Query: 980  PTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLEDEKGMVN 1039
            PT++LR  LD++GVVP   L  V DG+R+LVAGAVTHRQRPATA GVTFINLEDE GMVN
Sbjct: 963  PTQFLRARLDAMGVVPAKGLFGVPDGSRVLVAGAVTHRQRPATAAGVTFINLEDETGMVN 1022

Query: 1040 VLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRDFR 1095
            V+C+ G+W+RYRK+A TA ALI+RG VQNA+GAV+VVAD++  ++L++ S SRDFR
Sbjct: 1023 VVCSVGLWARYRKLAVTARALIIRGQVQNASGAVSVVADQLRPLDLQIRSTSRDFR 1078


>tr|C3JGP4|C3JGP4_RHOER Tax_Id=596309 SubName: Full=DNA polymerase
            III, alpha subunit family; EC=2.7.7.7;[Rhodococcus
            erythropolis SK121]
          Length = 1072

 Score = 1601 bits (4146), Expect = 0.0
 Identities = 801/1067 (75%), Positives = 887/1067 (83%), Gaps = 4/1067 (0%)

Query: 31   PGDGGDSPAWSRKRGAYEPPDQARMPASALPYAELHAHSAYSFLDGASTPEELVEEAARL 90
            PGDG DSPAWSRKRG Y   +  R  A  +PYAELHAHSA+SFLDGAS PEELVEEA RL
Sbjct: 8    PGDGSDSPAWSRKRGEYHAGELTR-GAGVVPYAELHAHSAFSFLDGASPPEELVEEAVRL 66

Query: 91   NLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSLSNVARTEDPDPPGPHLLVLARG 150
             L AIA+TDHDG YGVVRFAEAARE  + TVFGAELSL +V RT   DP G HLLVLARG
Sbjct: 67   GLEAIAVTDHDGFYGVVRFAEAAREWGMRTVFGAELSLDSVPRTGTADPGGTHLLVLARG 126

Query: 151  PEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPX 210
             EGYRRLSREIA AHLAGGEKG+ +YD+D LTEAAGGHW ILTGCRKGHVRQAL+ GG  
Sbjct: 127  QEGYRRLSREIAAAHLAGGEKGKLQYDYDVLTEAAGGHWQILTGCRKGHVRQALTSGGRE 186

Query: 211  XXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAPRFGLGVVATTAAHFATPS 270
                     V+RFGA+RVS+ELTHHG   DDERNA LAELA   GL  VATTAAHFA P 
Sbjct: 187  AAADALGDLVERFGAERVSVELTHHGLAEDDERNAVLAELAREHGLRTVATTAAHFAAPP 246

Query: 271  RGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQCA 328
            R RL           S+D AAGWLAP GG HLRSG EMA LF   PE V+ AADLG +CA
Sbjct: 247  RRRLAMAMAAVRSRQSLDEAAGWLAPTGGAHLRSGAEMAALFSLYPEAVSGAADLGRECA 306

Query: 329  FGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPERAPKAYAQIEHELRIIEQL 388
            F L LIAP+LPPFDVP GHTE SWLR L M GA  RYGPPE APKAY Q+EHEL IIE L
Sbjct: 307  FDLKLIAPKLPPFDVPAGHTEASWLRELTMVGALERYGPPEGAPKAYKQLEHELAIIEGL 366

Query: 389  RFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPAR 448
             FPGYFLVVHDI  FC++N+ILCQGRGSAANSAVCYA+G+TNVDP+ N LLFERFL+P R
Sbjct: 367  NFPGYFLVVHDIVSFCKNNDILCQGRGSAANSAVCYAIGITNVDPVRNKLLFERFLAPER 426

Query: 449  DGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQ 508
            DGPPDID+DIESD RE  IQ+VY +YGR YAAQVANVITYRG+S++RDMARALGFSQGQQ
Sbjct: 427  DGPPDIDVDIESDRREEAIQHVYAKYGRTYAAQVANVITYRGKSSVRDMARALGFSQGQQ 486

Query: 509  DAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPV 568
            DAWSK + RW G   + D  +IP  V+ELA QI   PRH+GIHSGGMVICDRPIADVCPV
Sbjct: 487  DAWSKQVGRWGGIDKNADT-DIPRPVLELAAQIEGYPRHLGIHSGGMVICDRPIADVCPV 545

Query: 569  EWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLS 628
            EWARM NRSVLQWDKDDCAA GLVKFD+LGLGMLSALHY +DLVAEHKGI VDLA LDLS
Sbjct: 546  EWARMANRSVLQWDKDDCAAAGLVKFDLLGLGMLSALHYMMDLVAEHKGITVDLAQLDLS 605

Query: 629  EPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYI 688
            E AVYEMLQRADSVGVFQVESRAQMATLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYI
Sbjct: 606  ETAVYEMLQRADSVGVFQVESRAQMATLPRLKPRNFYDLVVEVALIRPGPIQGGSVHPYI 665

Query: 689  KRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRS 748
            +RRN  EPV+YDHPS+E AL++TLGVPLFQEQLMQ+AVD AGF+ +EADQLRRAMGSKRS
Sbjct: 666  RRRNKLEPVSYDHPSLEKALERTLGVPLFQEQLMQMAVDVAGFTPSEADQLRRAMGSKRS 725

Query: 749  TAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFK 808
            T KM +LR+RFY GMR+ HGI   VADRIYEKL AFANFGFPESHS SFA+LVFYSSWFK
Sbjct: 726  TEKMEQLRARFYQGMRDLHGIGDEVADRIYEKLYAFANFGFPESHSQSFAALVFYSSWFK 785

Query: 809  LHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASLAHAGLENRGLDVRLG 868
            LHHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHG D+N SLAHA +E  G +VRLG
Sbjct: 786  LHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVQVHGADINVSLAHATVEAGGFEVRLG 845

Query: 869  LGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATAGALGCFGITRRE 928
            LG VR+IGD LA++IV++R+  G FTS LDLT RV+LT  Q E+LATAGAL  FGI+RRE
Sbjct: 846  LGEVRNIGDALAEKIVEQRDLGGPFTSFLDLTGRVELTTAQAESLATAGALASFGISRRE 905

Query: 929  GLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVWATGISPDSYPTEYLRKHL 988
             LWAAGAAA +RPDRLPG+G+S   P LPGMS +EL+AADVWATG+SPD+YPT++LR  L
Sbjct: 906  ALWAAGAAAGERPDRLPGIGASVTAPTLPGMSDVELAAADVWATGVSPDTYPTQFLRPQL 965

Query: 989  DSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWS 1048
            D+LGVVP  RLLD+ DG R+LV GAVTHRQRPATA GVTFINLEDE GMVNV+C+ G+W+
Sbjct: 966  DALGVVPASRLLDIPDGDRVLVGGAVTHRQRPATAAGVTFINLEDETGMVNVVCSVGLWA 1025

Query: 1049 RYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRDFR 1095
            +YRK+A TAPAL++RG VQNA GAVTVVADRM  ++LRV ++SRDFR
Sbjct: 1026 KYRKLANTAPALLIRGKVQNAEGAVTVVADRMQLMDLRVTAKSRDFR 1072


>sp|Q5Z1D1|DNAE2_NOCFA Tax_Id=37329 (dnaE2)RecName: Full=Error-prone
            DNA polymerase; EC=2.7.7.7;[Nocardia farcinica]
          Length = 1146

 Score = 1560 bits (4039), Expect = 0.0
 Identities = 802/1147 (69%), Positives = 885/1147 (77%), Gaps = 53/1147 (4%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW  GPPSWSE+ERVL+ +P R+      PGDGGDSPAWSRKR  Y       +    +
Sbjct: 1    MGWGTGPPSWSELERVLSGRPGRTDPEAMYPGDGGDSPAWSRKREPYLAEPIRPVDRPTV 60

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELHAHSAYSFLDGAS PEELVEEA RL L AIALTDHDG YG VRFAEAA+E  +AT
Sbjct: 61   PYAELHAHSAYSFLDGASQPEELVEEAVRLGLEAIALTDHDGFYGTVRFAEAAKEWGIAT 120

Query: 121  VFGAELSLS------------------------------------NVARTEDPDPPGPHL 144
            VFGAELSL                                     +  RT +PDPPGPHL
Sbjct: 121  VFGAELSLGVARPAPRRSARKAARGRGRAVRYAATPEFEHAAAPDSAPRTGEPDPPGPHL 180

Query: 145  LVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHILTGCRKGHVRQAL 204
            LVLARG EGYRRLSREIA AHLA GEKG  RYD D LT AAGGHWHILTGCRKGH+R AL
Sbjct: 181  LVLARGQEGYRRLSREIAAAHLAAGEKGVLRYDIDALTAAAGGHWHILTGCRKGHLRTAL 240

Query: 205  SDG------GPXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAPRFGLGV 258
            +D       G           V+RFGADRVS+ELTHHG P DDERNA L  LA R GL V
Sbjct: 241  ADDLAAGETGLPRAEAALRDLVERFGADRVSVELTHHGVPADDERNALLIALADRVGLPV 300

Query: 259  VATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEF 316
            +ATT AHFA P + R            S+D  AGWLAP GG HLRSG EMARLF   P+ 
Sbjct: 301  LATTGAHFAGPEQRRRAMALAAIRARRSLDEMAGWLAPAGGAHLRSGAEMARLFAACPDA 360

Query: 317  VAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPERAPKAYA 376
            VA A  L  +CAF L LIAPQLPPF VPDGH E+SWLR L + GAARRYGPP   P AY 
Sbjct: 361  VANAVALSRECAFDLRLIAPQLPPFAVPDGHDENSWLRELVLRGAARRYGPPHANPPAYR 420

Query: 377  QIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTNVDPIAN 436
            Q+EHEL +I  L FPGYFLVVHDI  FC  N ILCQGRGSAANSAVC+A+G+TNVDP+AN
Sbjct: 421  QLEHELEVIATLGFPGYFLVVHDIVSFCERNGILCQGRGSAANSAVCFAIGITNVDPVAN 480

Query: 437  DLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRGRSAIRD 496
            +LLFERFLSP RDGPPDIDIDIESD RE  IQ+VY RYGR+YAAQVANVITYRG+SA+RD
Sbjct: 481  ELLFERFLSPERDGPPDIDIDIESDRREEAIQHVYARYGREYAAQVANVITYRGKSAVRD 540

Query: 497  MARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGIHSGGMV 556
             A+ALGFS GQQDAWSK +SRW G   +    +IPEQV+ LA  +  LPRHMGIHSGGMV
Sbjct: 541  AAKALGFSPGQQDAWSKQVSRWTG-VGAETGTDIPEQVLRLAADLEGLPRHMGIHSGGMV 599

Query: 557  ICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAIDLVAEHK 616
            ICDRPIADVCPVEWARM  RSVLQWDKDDCAA+GLVKFDMLGLGMLSALHY IDLV EH+
Sbjct: 600  ICDRPIADVCPVEWARMAGRSVLQWDKDDCAAVGLVKFDMLGLGMLSALHYMIDLVREHE 659

Query: 617  GIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVEVALIRP 676
            G+EV L  LDL EPAVYEML RADSVGVFQVESRAQMATLPRL+PREFYDLVVEVALIRP
Sbjct: 660  GVEVRLHELDLKEPAVYEMLSRADSVGVFQVESRAQMATLPRLRPREFYDLVVEVALIRP 719

Query: 677  GPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAGFSAAEA 736
            GPIQGGSVHPYI+RRNG EPVTYDHP++E +L +TLGVPLFQEQLMQ+AVD AGF+AAEA
Sbjct: 720  GPIQGGSVHPYIRRRNGTEPVTYDHPALENSLGRTLGVPLFQEQLMQMAVDVAGFTAAEA 779

Query: 737  DQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFPESHSLS 796
            DQLRRAMGSKRS  +MRRL+ R Y GM E HGITG VADRIYEKL AFANFGFPESHS S
Sbjct: 780  DQLRRAMGSKRSPERMRRLKERLYRGMAELHGITGEVADRIYEKLYAFANFGFPESHSQS 839

Query: 797  FASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASLAHA 856
            FA+LVFYS+WFKLHHPAAFCA LLRAQPMGFYSPQSLVADARRHGV VHGPDVNASLA A
Sbjct: 840  FAALVFYSAWFKLHHPAAFCAGLLRAQPMGFYSPQSLVADARRHGVPVHGPDVNASLAEA 899

Query: 857  GLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATA 916
             LEN G +VRLGL  VRHIG +LA+RIV  R  +G +TS+LDLT RV+LTV Q EALATA
Sbjct: 900  TLENGGREVRLGLAGVRHIGSELAERIVAARVEHGPYTSVLDLTGRVELTVAQAEALATA 959

Query: 917  GAL----GCFGIT----RREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAAD 968
            GA     G  G      RR  LWAAGAAA +R   LPG G +   P LPGMSALEL+AAD
Sbjct: 960  GAFDSVTGPSGAERSGGRRAALWAAGAAARERAHLLPGTGPAADAPALPGMSALELAAAD 1019

Query: 969  VWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTF 1028
            VWATGISP SYPTE+LR  +D LGV+P  RLL+V DG+R+LV GAVTHRQRPATA GVTF
Sbjct: 1020 VWATGISPGSYPTEFLRARMDELGVIPAGRLLEVRDGSRVLVGGAVTHRQRPATAAGVTF 1079

Query: 1029 INLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVG 1088
            +NLEDE GMVNV+C+ G+W+RYR +AQ+A AL+VRG VQNA GAV+VVA+ +  ++L +G
Sbjct: 1080 LNLEDETGMVNVVCSVGLWTRYRALAQSASALLVRGRVQNAEGAVSVVAEHLQLLSLGMG 1139

Query: 1089 SRSRDFR 1095
            SRSRDFR
Sbjct: 1140 SRSRDFR 1146


>tr|D0L8J4|D0L8J4_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase
            III, alpha subunit;[Gordonia bronchialis]
          Length = 1090

 Score = 1497 bits (3876), Expect = 0.0
 Identities = 761/1103 (68%), Positives = 870/1103 (78%), Gaps = 23/1103 (2%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLES------PGDGGDSPAWSRKRGAYEPPDQAR 54
            MGW  GPP+WSE+ERVL+ +   +G P E+       GDG DSPAWSRKRGA+ P D  R
Sbjct: 1    MGWDQGPPTWSELERVLSGRAPGAGRPGEAFGPGDNTGDGSDSPAWSRKRGAFRP-DPVR 59

Query: 55   MPASALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAAR 114
               S++PYAELHAHSAYSFLDGAS PEE+V EA RL+LRA+++TDHDG YG+VRFAEAAR
Sbjct: 60   PEPSSVPYAELHAHSAYSFLDGASMPEEMVTEAQRLDLRALSITDHDGFYGIVRFAEAAR 119

Query: 115  ELDVATVFGAELSLSN-VARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGR 173
            E  + TVFG+ELSL++ VART   DPPG HLLVLAR  EGYRRLSR IA AH+  GEKG 
Sbjct: 120  EFGMPTVFGSELSLAHDVARTGHNDPPGEHLLVLARDSEGYRRLSRTIADAHMVAGEKGL 179

Query: 174  PRYDFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELT 233
             RY+ + L+ AAGGHW ILTGCRKG VR+AL  GG           VDRFG D V++ELT
Sbjct: 180  LRYERESLSSAAGGHWLILTGCRKGAVRRALDRGGASAAEVALRDLVDRFGRDDVAVELT 239

Query: 234  HHGHPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGW 293
              G P DD+RNAALA +A   G+  VATT AHFA P R RL            IDT AGW
Sbjct: 240  ASGLPDDDDRNAALAGVARLVGVATVATTGAHFAGPRRRRLAMAMAAVRARTDIDTIAGW 299

Query: 294  LAPLGGVHLRSGEEMARLFDP--EFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDS 351
            +  + G HL SG+EMARL     + +  A  L   CAF L LIAPQLPPFDVPDGHTE +
Sbjct: 300  MPGVAGAHLCSGDEMARLLPAHRDAIDNAVQLAADCAFELGLIAPQLPPFDVPDGHTEIT 359

Query: 352  WLRHLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILC 411
            WLR L M  A RRYG P + P+AY QIEHEL I+E L FPGYFLVV DI  FC+ N+ILC
Sbjct: 360  WLRELTMTRARRRYGTPAQHPQAYRQIEHELAIVETLNFPGYFLVVADIVDFCKANDILC 419

Query: 412  QGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVY 471
            QGRGSAANSAVCYALG+TNVDP+AN LLFERFLSP RDGPPDID+DIESD RE  IQYVY
Sbjct: 420  QGRGSAANSAVCYALGITNVDPVANKLLFERFLSPERDGPPDIDVDIESDRREEAIQYVY 479

Query: 472  ERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIP 531
             RYGRDY+AQVANVITYRGRSA+RDMARALG+  GQQDAWS+           PD  E P
Sbjct: 480  RRYGRDYSAQVANVITYRGRSAVRDMARALGYGTGQQDAWSR----------LPD--EAP 527

Query: 532  EQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGL 591
             +V +LA +I  +PRH+GIHSGGMVICDRPIADVCP EWARMENRSVLQWDKDDCAAIGL
Sbjct: 528  PEVADLAGEILGMPRHLGIHSGGMVICDRPIADVCPTEWARMENRSVLQWDKDDCAAIGL 587

Query: 592  VKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRA 651
            VKFD+LGLGMLSALHYAIDLVAEHKG+ VDLA LDLSEPAVYEML RADSVGVFQVESRA
Sbjct: 588  VKFDLLGLGMLSALHYAIDLVAEHKGLHVDLAELDLSEPAVYEMLCRADSVGVFQVESRA 647

Query: 652  QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKT 711
            QMATLPRL+PR+FYDLVVEVALIRPGPIQGGSVHPYI+RR+GQE  T +HPSM  AL++T
Sbjct: 648  QMATLPRLRPRKFYDLVVEVALIRPGPIQGGSVHPYIRRRHGQEKPTVEHPSMHKALERT 707

Query: 712  LGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITG 771
            LGVPLFQEQLMQLAVD AGF AA ADQLRRAMGSKRS  +M RLR RFYDGMR+ HGITG
Sbjct: 708  LGVPLFQEQLMQLAVDVAGFDAAGADQLRRAMGSKRSPERMERLRQRFYDGMRDLHGITG 767

Query: 772  VVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ 831
             VADRI+EK+ AFANFGFPESHS SFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ
Sbjct: 768  EVADRIFEKMSAFANFGFPESHSQSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ 827

Query: 832  SLVADARRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANG 891
            SLVADARRHGV VH PD+N SL HA LEN GL+VRLGL  VR +G ++A+RIV+ R+A+G
Sbjct: 828  SLVADARRHGVRVHRPDINVSLPHATLENEGLEVRLGLDGVRGVGTEVAERIVERRDADG 887

Query: 892  QFTSLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSST 951
             +  + D++ R  LT  + E LA AGA   FG++RR+ LW AGAAAT R D+LP + S+ 
Sbjct: 888  PYRDITDVSRRAGLTTRELEGLAGAGAFDVFGVSRRQALWEAGAAATVRDDQLP-LASAA 946

Query: 952  HIPPLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVA 1011
              P LPG+S +EL+A D WATGI+P SYPT++LR  L ++GV+  + LL V DG+R++V 
Sbjct: 947  TTPTLPGLSDVELAATDAWATGITPTSYPTQFLRPRLRAMGVLAAETLLSVPDGSRVVVG 1006

Query: 1012 GAVTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATG 1071
            GAVTHRQRPATA GVTFINLEDE GMVNV+C+ G+WS+YR +A +A ALIVRG VQNA G
Sbjct: 1007 GAVTHRQRPATASGVTFINLEDETGMVNVVCSVGLWSKYRALAHSASALIVRGRVQNAEG 1066

Query: 1072 AVTVVADRMDAVNLRVGSRSRDF 1094
            AVTVVADR+  ++LRVG+RSRD+
Sbjct: 1067 AVTVVADRLQRMDLRVGTRSRDW 1089


>tr|D5UUJ4|D5UUJ4_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase
            III, alpha subunit;[Tsukamurella paurometabola DSM 20162]
          Length = 1093

 Score = 1493 bits (3865), Expect = 0.0
 Identities = 761/1099 (69%), Positives = 868/1099 (78%), Gaps = 10/1099 (0%)

Query: 1    MGWHNGPPSWSEMERVLTSK-PRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASA 59
            MGW NGP SW+EMERVL+ + P R   P   PGDGGDSPAWSRKR  Y P  +    AS 
Sbjct: 1    MGWSNGP-SWAEMERVLSGRAPARREEP---PGDGGDSPAWSRKREPYVP-GEGGPGASR 55

Query: 60   LPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVA 119
            +PYAELHAH+A+SFLDGA+ PEE+VE+A  L L A+A+TDH+G YGVVRFAEAA  L V 
Sbjct: 56   VPYAELHAHTAFSFLDGAAQPEEMVEQAHALGLTALAVTDHNGFYGVVRFAEAALGLGVP 115

Query: 120  TVFGAELSLSNVA-RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDF 178
            TVFGAELSL   A RT   DP G HLLVLARG EGYRRLSR +A+AH+  GEKG+ R+  
Sbjct: 116  TVFGAELSLLRDAERTGTADPDGEHLLVLARGQEGYRRLSRAMAEAHMEAGEKGKLRFHP 175

Query: 179  DQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHP 238
            D+L E + GHWHILTGCRKG VR+ L   GP          +DRFG DRVS+ELT HG P
Sbjct: 176  DRLAEWSEGHWHILTGCRKGAVRRGLDAAGPDGAAGALAHLLDRFGPDRVSMELTVHGVP 235

Query: 239  CDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLG 298
             DDERN  LA +A R G+G VATT AHFA P + RL           S+D   GWL   G
Sbjct: 236  EDDERNHLLAGVAARMGVGTVATTGAHFARPDQRRLAATLAAIRARRSLDELDGWLPAAG 295

Query: 299  GVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHL 356
            G HLRSG+EMA L    P  +A A +L  +CAF L LIAP LPPFDVP GHTE +WLR L
Sbjct: 296  GAHLRSGDEMALLLPEHPGAIAGAVELAAECAFSLRLIAPNLPPFDVPAGHTEATWLREL 355

Query: 357  AMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGS 416
               GA  RYGPPE  PKAY QIEHEL +IE L FPGYFL+VH I  FCR+++ILCQGRGS
Sbjct: 356  TRRGALDRYGPPESNPKAYRQIEHELNVIETLTFPGYFLIVHSIVSFCRESDILCQGRGS 415

Query: 417  AANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGR 476
            AANSAVC+ALG+T VDP+ N LLFERFL+P RDGPPDID+DIESD RE  IQ+VY  YGR
Sbjct: 416  AANSAVCFALGITAVDPVRNGLLFERFLAPERDGPPDIDVDIESDRREEAIQFVYRTYGR 475

Query: 477  DYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIE 536
             YAAQVANVITYRGRSA+RD ARALG+SQGQQDAWSK +S +  R D P    +PE+VI+
Sbjct: 476  AYAAQVANVITYRGRSAVRDTARALGYSQGQQDAWSKQISSYGWRND-PVPDGVPERVID 534

Query: 537  LANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDM 596
            LA QIA+LPRH+GIHSGGMVICDRPIADVCP EWARM++RSVLQWDKDDCAA GLVKFD+
Sbjct: 535  LATQIADLPRHLGIHSGGMVICDRPIADVCPTEWARMQDRSVLQWDKDDCAAAGLVKFDL 594

Query: 597  LGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATL 656
            LGLGMLSALHYA DL+ EHKGIEVD A LDL++  VY ML+RADSVGVFQVESRAQMATL
Sbjct: 595  LGLGMLSALHYAQDLLKEHKGIEVDFAQLDLTDDTVYAMLRRADSVGVFQVESRAQMATL 654

Query: 657  PRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPL 716
            PRLKPR FYDLVVEVALIRPGPIQGGSVHPYI+RRNGQE    +HPSM   L++TLGVPL
Sbjct: 655  PRLKPRTFYDLVVEVALIRPGPIQGGSVHPYIRRRNGQEEPRVEHPSMWKTLERTLGVPL 714

Query: 717  FQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADR 776
            FQEQLMQLAVD A F+ AEADQLRRAMGSKRST KM +LR RFY G ++ HGI G +ADR
Sbjct: 715  FQEQLMQLAVDVADFTPAEADQLRRAMGSKRSTEKMEQLRERFYRGAKQLHGIEGELADR 774

Query: 777  IYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVAD 836
            I+EKL AFANFGFPESHS SFASLVFYSSWFK +HPAAFCAALLRAQPMGFYSPQSLVAD
Sbjct: 775  IFEKLAAFANFGFPESHSQSFASLVFYSSWFKCYHPAAFCAALLRAQPMGFYSPQSLVAD 834

Query: 837  ARRHGVTVHGPDVNASLAHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSL 896
            ARRHGVTVHGPD+N SL  A LEN G++VRLGL ++R IGD+LA+RIV EREA G +  L
Sbjct: 835  ARRHGVTVHGPDLNISLPWANLENAGMEVRLGLAAIRTIGDELAERIVAEREAGGIYAGL 894

Query: 897  LDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPL 956
             DLTSRV+LTV Q EALAT+GAL CFG  RR+ LW AGAAA +RPDRLPG  ++   P L
Sbjct: 895  TDLTSRVELTVAQAEALATSGALDCFGRDRRQALWEAGAAARERPDRLPGTATAGAPPTL 954

Query: 957  PGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTH 1016
            PGMS  EL+AADVWAT ++   YPTE+LR  LD LGV+P D+LL + DG R+LV GAVTH
Sbjct: 955  PGMSETELAAADVWATSVTVGKYPTEFLRPKLDELGVIPADQLLSLPDGDRVLVGGAVTH 1014

Query: 1017 RQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVV 1076
            RQRPATA GVTFINLEDE GMVNV+C+ G+W+RYR++AQ+APAL++RG +QNA GAVTVV
Sbjct: 1015 RQRPATAGGVTFINLEDETGMVNVVCSQGLWARYRRLAQSAPALLIRGKLQNAEGAVTVV 1074

Query: 1077 ADRMDAVNLRVGSRSRDFR 1095
            ADR+  ++L V SRSRD++
Sbjct: 1075 ADRLQRMDLSVPSRSRDWQ 1093


>tr|C8XBY4|C8XBY4_NAKMY Tax_Id=479431 SubName: Full=DNA polymerase
            III, alpha subunit;[Nakamurella multipartita]
          Length = 1092

 Score = 1377 bits (3564), Expect = 0.0
 Identities = 716/1102 (64%), Positives = 830/1102 (75%), Gaps = 17/1102 (1%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQARMPASAL 60
            MGW N    WSE+ER L+ +P        +PG G        ++   +PP     P +A+
Sbjct: 1    MGWTNPNVPWSELERALSGRP-------PAPGRGPLQAIRHWQQDRPDPPPIPTGPPTAV 53

Query: 61   PYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDVAT 120
            PYAELH HSA+SFLDGASTPE+LV EA RL L A+A+TDHDGLYG+VRFAEAARE  + T
Sbjct: 54   PYAELHCHSAFSFLDGASTPEQLVAEAVRLGLEALAITDHDGLYGIVRFAEAAREAGLRT 113

Query: 121  VFGAELSLS-NVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYDFD 179
            ++GAELSL     +   PDP G HLLVLARG EGY RLS +I++A LAGG KGRP YD D
Sbjct: 114  LYGAELSLGLPEPQLGVPDPVGEHLLVLARGQEGYHRLSTQISRAQLAGGAKGRPVYDLD 173

Query: 180  QLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGHPC 239
            +L +AAGGHW ILTGCRKG VR+AL   GP          +DRFG D V +ELT    P 
Sbjct: 174  ELADAAGGHWLILTGCRKGSVRRALQRHGPARAAEELRALMDRFGRDNVVVELTTSLAPT 233

Query: 240  DDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPLGG 299
            DDE N ALA LA    L +VATTAAH+ATP+ GR+           S++ A  +L    G
Sbjct: 234  DDEDNDALAALAAELDLPIVATTAAHYATPAEGRIAAAMAAVRARRSLEEADPYLPAGPG 293

Query: 300  VHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLA 357
             HLRSG EMA LF   P  V  AA +G +C+F L L+AP+LPP+DVP GH E+S LR L 
Sbjct: 294  SHLRSGAEMAALFARYPAAVPTAAAIGRECSFDLRLLAPKLPPYDVPPGHDENSHLRQLT 353

Query: 358  MAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSA 417
            +AGAARRYG P+  P AYAQIE EL II +L FPGYFL+V+DI  FCR ++ILCQGRGSA
Sbjct: 354  LAGAARRYGSPDDRPDAYAQIEKELGIIARLDFPGYFLIVNDIVDFCRRSDILCQGRGSA 413

Query: 418  ANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRD 477
            ANSAVCYALG+T VD +  +LLFERFL+P RDGPPDID+DIESD RE VIQYV+  YGRD
Sbjct: 414  ANSAVCYALGITAVDAVRYELLFERFLAPERDGPPDIDVDIESDRREEVIQYVFATYGRD 473

Query: 478  YAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIEL 537
             AAQVANV TYR R A+RDMA+ALG S GQQDA+SK L  W       D + IP  V+ L
Sbjct: 474  KAAQVANVNTYRPRMAVRDMAKALGHSPGQQDAYSKQLDGWVPLAGQ-DASGIPADVLAL 532

Query: 538  ANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDML 597
            A++I + PRH+ IHSGGMVICDRP+A VCPVEWARMENRSVLQWDKDDCAA+GLVKFD+L
Sbjct: 533  AHRIQDYPRHLSIHSGGMVICDRPVASVCPVEWARMENRSVLQWDKDDCAAMGLVKFDLL 592

Query: 598  GLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLP 657
            GLGMLSALHYA+DL+ EH+G+E+D A LDL EPAVYEMLQRADSVGVFQVESRAQMATLP
Sbjct: 593  GLGMLSALHYAVDLIREHEGLEIDFAQLDLEEPAVYEMLQRADSVGVFQVESRAQMATLP 652

Query: 658  RLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLF 717
            RLKPR FYDLVVEVALIRPGPIQG +VHPYI+RRNGQE VTYDHP ME +L KTLG+PLF
Sbjct: 653  RLKPRTFYDLVVEVALIRPGPIQGNAVHPYIRRRNGQEEVTYDHPVMEKSLAKTLGIPLF 712

Query: 718  QEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRI 777
            QEQLMQLAVD AGF A EADQLRRAMG+KRS  KM +L++R YDGMRERHGITG VADRI
Sbjct: 713  QEQLMQLAVDVAGFDAGEADQLRRAMGAKRSKGKMEKLKARLYDGMRERHGITGPVADRI 772

Query: 778  YEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADA 837
            YE+L AFANFGF ESH+LSFA+LVFYS+W KLHHPAAFCAALLRAQPMGFYSPQSLVADA
Sbjct: 773  YERLLAFANFGFAESHALSFAALVFYSAWLKLHHPAAFCAALLRAQPMGFYSPQSLVADA 832

Query: 838  RRHGVTVHGPDVNASLAHAGLENRGLD----VRLGLGSVRHIGDDLAQRIVDEREANGQF 893
            RRHGV++  PD+NAS AHA LE  G D    VRLGL  VR IGD+LA RIV  R   G +
Sbjct: 833  RRHGVSIRRPDINASRAHADLE-PGPDGRPAVRLGLDEVRTIGDELAARIVARRPTEG-Y 890

Query: 894  TSLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHI 953
             SL +LT  V LT PQ EALATAGAL     TRR  LWAAGAAA  R   L G       
Sbjct: 891  RSLDELTRTVTLTAPQAEALATAGALDTLVGTRRHALWAAGAAAGDRAGTLAGSVVGLDA 950

Query: 954  PPLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGA 1013
            P LPGMS +EL+ AD+WATGISP +YPTE+ R  LD+ GV     L D A GTR+LVAG 
Sbjct: 951  PALPGMSDIELTVADIWATGISPQTYPTEFSRDQLDAWGVKTAAALKDTAHGTRVLVAGV 1010

Query: 1014 VTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAV 1073
            VTHRQRPATA GV FINLEDE GM+NV+C+ G+W++Y+++A+ +PAL+VRG+V+ A GA+
Sbjct: 1011 VTHRQRPATASGVIFINLEDETGMLNVICSVGLWAKYKQIARGSPALLVRGVVERAGGAI 1070

Query: 1074 TVVADRMDAVNLRVGSRSRDFR 1095
            ++VADR+  VNL   + SRDFR
Sbjct: 1071 SIVADRIARVNLIAATPSRDFR 1092


>tr|A4FP51|A4FP51_SACEN Tax_Id=405948 (dnaE2)SubName: Full=DNA
            polymerase III, alpha subunit, putative;
            EC=2.7.7.7;[Saccharopolyspora erythraea]
          Length = 1056

 Score = 1344 bits (3479), Expect = 0.0
 Identities = 683/1044 (65%), Positives = 793/1044 (75%), Gaps = 12/1044 (1%)

Query: 59   ALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELDV 118
            A+PYAELHAHS +SFLDGAS PEELV E+ARL L AIALTDHDG+YGVVRF+EAA E  V
Sbjct: 16   AVPYAELHAHSNFSFLDGASHPEELVAESARLGLEAIALTDHDGMYGVVRFSEAAAEHGV 75

Query: 119  ATVFGAELSLS-NVARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRPRYD 177
             TVFGAELSL    A+T  PDP G HLLVLAR P GY RL REI+ A LAG EKGRP Y 
Sbjct: 76   RTVFGAELSLGLTAAQTGVPDPEGNHLLVLARDPGGYARLCREISSAQLAGQEKGRPTYR 135

Query: 178  FDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELTHHGH 237
             +QL EAA  HW +LTGCRKG VR AL++GGP          V  FG + V++ELT    
Sbjct: 136  LEQLAEAAEDHWLVLTGCRKGAVRSALAEGGPAAAAAELDRLVALFGGENVAVELTDQDL 195

Query: 238  PCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGWLAPL 297
            P D ERN  L  LA   GL  VAT  AHFA P  GR+            +D   GWL   
Sbjct: 196  PTDSERNDVLFALARDAGLPAVATNGAHFAGPWNGRMASVVAAIRARRGLDEMDGWLPAW 255

Query: 298  GGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRH 355
             G HLRSGEEMA  F   P  V  AA LG +CAF L L+AP+LPPFDVP+G TE  WLR 
Sbjct: 256  AGNHLRSGEEMAERFARYPGAVETAARLGRECAFDLRLVAPRLPPFDVPEGRTEAEWLRE 315

Query: 356  LAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRG 415
            L   GA RRYG P+  P AYAQIEHEL +IE+L FPGYFLVVHDI  FC +  ILCQGRG
Sbjct: 316  LTYRGALRRYGLPQDNPAAYAQIEHELAVIEKLDFPGYFLVVHDIVSFCGEMGILCQGRG 375

Query: 416  SAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYG 475
            SAANSAVC+AL +TN DP+  DLLFERFL+P RDGPPDID+DIESD RE  IQYVY +YG
Sbjct: 376  SAANSAVCFALRITNADPVRYDLLFERFLAPERDGPPDIDLDIESDRREEAIQYVYRKYG 435

Query: 476  RDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVI 535
            R +AAQVANVI+YR +SA+RD+ARALG+S GQQDAWSK +  W   PD     E+P+QV 
Sbjct: 436  RTHAAQVANVISYRPKSAVRDVARALGYSPGQQDAWSKQIEHWGPLPDD---GEVPDQVR 492

Query: 536  ELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFD 595
            ELA ++   PRH+GIHSGGMVIC +P+++VCPVEWARM  R+VLQWDKDDCA++GLVKFD
Sbjct: 493  ELAGELMGYPRHLGIHSGGMVICHQPVSEVCPVEWARMPGRTVLQWDKDDCASVGLVKFD 552

Query: 596  MLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMAT 655
            +LGLGMLSALHYAIDL  EH GIEVDL  LDL++  VY ML+RAD+VGVFQVESRAQ+AT
Sbjct: 553  LLGLGMLSALHYAIDLAREHHGIEVDLGELDLADDEVYAMLRRADAVGVFQVESRAQLAT 612

Query: 656  LPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVP 715
            LPRLKPR+FYDLVVEVALIRPGPIQGGSVHPYI+RRNG+E   Y+HP M  AL+KTLGVP
Sbjct: 613  LPRLKPRKFYDLVVEVALIRPGPIQGGSVHPYIRRRNGEEDWDYEHPLMAAALEKTLGVP 672

Query: 716  LFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVAD 775
            LFQEQLMQLAVD AGFSA EAD+LRRAMGSKRS  +M RLR R ++GM   +GITG +A+
Sbjct: 673  LFQEQLMQLAVDIAGFSAGEADELRRAMGSKRSEERMARLRGRLFEGMAV-NGITGELAE 731

Query: 776  RIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVA 835
            RIY++L AFANFGFPESH+LSFA LVF SSWFK ++PA FCAALL+AQPMGFYSPQSLVA
Sbjct: 732  RIYQQLLAFANFGFPESHALSFAVLVFASSWFKRYYPAVFCAALLKAQPMGFYSPQSLVA 791

Query: 836  DARRHGVTVHGPDVNASLAHAGLE-----NRGLDVRLGLGSVRHIGDDLAQRIVDEREAN 890
            DARRHGV VHGPDVNAS   A LE       G  VRLGL SVR +GD +A+++V ER  N
Sbjct: 792  DARRHGVRVHGPDVNASRGQADLEPDAESEGGQAVRLGLASVRTLGDSVAEQLVAERTEN 851

Query: 891  GQFTSLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSS 950
            G +T + DL+ R+ L   Q EALATAGA GCFG++RRE LW A AAA  RPDRLPG   S
Sbjct: 852  GPYTGMADLSRRMSLNAAQMEALATAGAFGCFGLSRREALWNAAAAAGDRPDRLPGTTVS 911

Query: 951  THIPPLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILV 1010
               PPLPGM  +EL+AADVWATGISPDSYP ++LR  L  +G +    L +V +G R+LV
Sbjct: 912  ADAPPLPGMDGVELAAADVWATGISPDSYPLQFLRSRLGEMGALSAADLSEVDNGERVLV 971

Query: 1011 AGAVTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNAT 1070
             GAVTHRQRPATA GVTF+NLEDE GM+NV+C PG+W+RYRK+A+T+ AL+VRG ++ A 
Sbjct: 972  GGAVTHRQRPATAGGVTFLNLEDETGMINVVCTPGLWARYRKIARTSAALLVRGTIECAE 1031

Query: 1071 GAVTVVADRMDAVNLRVGSRSRDF 1094
            G + + ADR+  +++RV S SRDF
Sbjct: 1032 GVINLRADRLQHLDMRVPSTSRDF 1055


>tr|D5Z8L0|D5Z8L0_MYCTU Tax_Id=537209 SubName: Full=DNA polymerase III
            alpha subunit dnaE2 (DNA
            nucleotidyltransferase);[Mycobacterium tuberculosis GM
            1503]
          Length = 861

 Score = 1321 bits (3420), Expect = 0.0
 Identities = 651/782 (83%), Positives = 710/782 (90%), Gaps = 2/782 (0%)

Query: 314  PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPPERAPK 373
            P  V AAA+LGE+CAFGL LIAP+LPPFDVPDGHTEDSWLR L MAGA  RYGPP+ AP+
Sbjct: 82   PRRVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPR 141

Query: 374  AYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTNVDP 433
            AY+QIEHEL++I QLRFPGYFLVVHDIT+FCRDN+ILCQGRGSAANSAVCYALGVT VDP
Sbjct: 142  AYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQGRGSAANSAVCYALGVTAVDP 201

Query: 434  IANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRGRSA 493
            +AN+LLFERFLSPARDGPPDIDIDIESD RE VIQYVY +YGRDYAAQVANVITYRGRSA
Sbjct: 202  VANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYHKYGRDYAAQVANVITYRGRSA 261

Query: 494  IRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIPEQVIELANQIANLPRHMGIHSG 553
            +RDMARALGFS GQQDAWSK +S W G+ D  DV  IPEQVI+LA QI NLPRH+GIHSG
Sbjct: 262  VRDMARALGFSPGQQDAWSKQVSHWTGQAD--DVDGIPEQVIDLATQIRNLPRHLGIHSG 319

Query: 554  GMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAIDLVA 613
            GMVICDRPIADVCPVEWARM NRSVLQWDKDDCAAIGLVKFD+LGLGMLSALHYA DLVA
Sbjct: 320  GMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLVKFDLLGLGMLSALHYAKDLVA 379

Query: 614  EHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVEVAL 673
            EHKGIEVDLA LDLSEPAVYEML RADSVGVFQVESRAQMATLPRLKPR FYDLVVEVAL
Sbjct: 380  EHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRAQMATLPRLKPRVFYDLVVEVAL 439

Query: 674  IRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAGFSA 733
            IRPGPIQGGSVHPYI+RRNG +PV Y+HPSM PAL+KTLGVPLFQEQLMQLAVDCAGFSA
Sbjct: 440  IRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRKTLGVPLFQEQLMQLAVDCAGFSA 499

Query: 734  AEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFPESH 793
            AEADQLRRAMGSKRST +MRRLR RFYDGMR  HG    V DRIYEKLEAFANFGFPESH
Sbjct: 500  AEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGAPDEVIDRIYEKLEAFANFGFPESH 559

Query: 794  SLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASL 853
            +LSFASLVFYS+WFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGV VHGP VNASL
Sbjct: 560  ALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVAVHGPCVNASL 619

Query: 854  AHAGLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEAL 913
            AHA  EN G +VRLGLG+VR++G +LA+++V ER ANG FTSL DLTSRVQL+VPQ EAL
Sbjct: 620  AHATCENAGTEVRLGLGAVRYLGAELAEKLVAERTANGPFTSLPDLTSRVQLSVPQVEAL 679

Query: 914  ATAGALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVWATG 973
            ATAGALGCFG++RRE LWAAGAAAT RPDRLPGVGSS+HIP LPGMS LEL+AADVWATG
Sbjct: 680  ATAGALGCFGMSRREALWAAGAAATGRPDRLPGVGSSSHIPALPGMSELELAAADVWATG 739

Query: 974  ISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLED 1033
            +SPDSYPT++LR  LD++GV+P +RL  V+DG R+L+AGAVTHRQRPATAQGVTFINLED
Sbjct: 740  VSPDSYPTQFLRADLDAMGVLPAERLGSVSDGDRVLIAGAVTHRQRPATAQGVTFINLED 799

Query: 1034 EKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRD 1093
            E GMVNVLC PGVW+R+RK+A TAPAL++RG VQNA+GA+TVVA+RM  + L VG+RSRD
Sbjct: 800  ETGMVNVLCTPGVWARHRKLAHTAPALLIRGQVQNASGAITVVAERMGRLTLAVGARSRD 859

Query: 1094 FR 1095
            FR
Sbjct: 860  FR 861


>tr|D3CHG8|D3CHG8_9ACTO Tax_Id=648999 SubName: Full=DNA polymerase
            III, alpha subunit;[Micromonospora sp. L5]
          Length = 1116

 Score = 1321 bits (3418), Expect = 0.0
 Identities = 690/1123 (61%), Positives = 806/1123 (71%), Gaps = 35/1123 (3%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGL-----PLESPGDGGDSPAWSRKRGAYEPPDQARM 55
            M +HN    WS++E+VL+ +           PL    DGGDSPAWSRKR  Y PP+ AR 
Sbjct: 1    MSFHNPKMPWSKLEQVLSGRAGGERHLHVVDPLAVDADGGDSPAWSRKRQEYRPPELAR- 59

Query: 56   PASALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARE 115
            P   +PYAELHAHS +SFLDGAS PEEL EEAARL L A+A+TDHDG YGVVRFAEAAR 
Sbjct: 60   PDGVVPYAELHAHSNFSFLDGASHPEELAEEAARLGLTALAVTDHDGFYGVVRFAEAARA 119

Query: 116  LDVATVFGAELSLSNVA-RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRP 174
            L + T+FGAELSL     +  +PDP G HLLVLA G EGY RL+  I++A L GGEKGRP
Sbjct: 120  LRLPTIFGAELSLGLPGPQNGEPDPLGRHLLVLAHGHEGYARLAATISRAQLRGGEKGRP 179

Query: 175  RY-DFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELT 233
             Y + ++L      H  +LTGCRKGHV  AL   G              FGA+ V++ELT
Sbjct: 180  VYGELEELAAELRDHVLVLTGCRKGHVPAALLTEGVDAAARELDRLTALFGAETVAVELT 239

Query: 234  HHGHPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGW 293
             HGHP D +RN ALA+LA   GL  VAT   H+ATP R RL           S+D   GW
Sbjct: 240  DHGHPVDADRNDALADLAAAAGLPTVATNNVHYATPGRRRLATTVAAVRARRSLDEIDGW 299

Query: 294  LAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDS 351
            L      HLRSG EMA  F   P  VA AA+ G + AF L L+AP+LP + VP GHTE S
Sbjct: 300  LPAAATAHLRSGAEMAARFAAYPGAVARAAEYGAELAFDLQLVAPRLPAYPVPPGHTEMS 359

Query: 352  WLRHLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILC 411
            WLR L M GA  RYGPPE  P+AYAQ+EHELR+IE L FPGYFLVV+DI  FCR  +I C
Sbjct: 360  WLRRLTMDGARERYGPPEAHPEAYAQLEHELRMIEDLGFPGYFLVVYDIVAFCRAQDIYC 419

Query: 412  QGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVY 471
            QGRGSAANSAVCYAL +TNVD + + LLFERFL+P RDGPPDID+DIESD RE VIQ+VY
Sbjct: 420  QGRGSAANSAVCYALRITNVDAVRHRLLFERFLAPERDGPPDIDVDIESDRREEVIQHVY 479

Query: 472  ERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIP 531
             RYGR++ AQVANVI+YR RSA+RD+A+A GFS GQQDAWSK + RW G   + DVA+IP
Sbjct: 480  ARYGREHTAQVANVISYRPRSAVRDVAKAFGFSPGQQDAWSKQIDRW-GSVAAVDVADIP 538

Query: 532  EQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGL 591
            EQV+  AN++   PRH+GIHSGGMVICDRP+ +VCPVEW RM  RSVLQWDKDDCAA+GL
Sbjct: 539  EQVVAYANELQTFPRHLGIHSGGMVICDRPVIEVCPVEWGRMPGRSVLQWDKDDCAAVGL 598

Query: 592  VKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRA 651
            VKFD+LGLGMLSALHY  DL+    G  +DL  + L +P VY+ML RADSVGVFQVESRA
Sbjct: 599  VKFDLLGLGMLSALHYGYDLI----GSRLDLGDMTLDDPEVYDMLCRADSVGVFQVESRA 654

Query: 652  QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKT 711
            QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYI+R+NGQEPVTY HP M  AL+KT
Sbjct: 655  QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIRRKNGQEPVTYAHPLMRNALEKT 714

Query: 712  LGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITG 771
            LGVPLFQEQLMQLA+D AGF AA ADQLRRAMG+KRS  +M ++  R Y GM ER GITG
Sbjct: 715  LGVPLFQEQLMQLAIDLAGFDAAGADQLRRAMGAKRSVERMAQIADRLYAGMAER-GITG 773

Query: 772  VVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ 831
             +AD +Y KL AFA++GFPESH++SFA LV+ SSW K +HP  F AALL AQPMGFYSPQ
Sbjct: 774  ELADDVYRKLTAFASYGFPESHAMSFAYLVYASSWLKRYHPGPFLAALLNAQPMGFYSPQ 833

Query: 832  SLVADARRHGVTVHGPDVNASLAHAGLENR-------------------GLDVRLGLGSV 872
            +L  DARRHGV V  PD+NAS A A LE+                    G  VRLGLGSV
Sbjct: 834  TLADDARRHGVEVRRPDINASGAKAVLESTPETRWGSVPGEPPHAWGLGGPAVRLGLGSV 893

Query: 873  RHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWA 932
            R +G+D+A+RI  ER A+G +  + DL  RV LT  Q EALATA A  CFG+TRR+ LWA
Sbjct: 894  RTLGEDVAERIEAERAAHGPYRDMPDLARRVGLTAAQLEALATADAFACFGLTRRQALWA 953

Query: 933  AGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLG 992
            AGAAA  RP RLPG  +    P LPGM+A++   ADVWATG+SP+S+P  ++R  LD LG
Sbjct: 954  AGAAAQDRPGRLPGTVTGADPPTLPGMAAVDRLVADVWATGLSPESHPARFIRDRLDELG 1013

Query: 993  VVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRK 1052
             VP  RL  V  G RI V G VTHRQRPATA GVTF+NLEDE GM+NV C+PG+W RYR+
Sbjct: 1014 AVPIARLGQVPPGQRIRVGGIVTHRQRPATAGGVTFLNLEDETGMLNVTCSPGLWQRYRR 1073

Query: 1053 VAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRDFR 1095
            VA+T+ AL+VRG +Q   G   + ADR+DA+   V   SRDFR
Sbjct: 1074 VARTSGALVVRGRLQRHEGVTNLTADRLDAIEPPVTPASRDFR 1116


>tr|D1SIS9|D1SIS9_9ACTO Tax_Id=644283 SubName: Full=DNA polymerase
            III, alpha subunit;[Micromonospora aurantiaca ATCC 27029]
          Length = 1116

 Score = 1320 bits (3417), Expect = 0.0
 Identities = 689/1123 (61%), Positives = 806/1123 (71%), Gaps = 35/1123 (3%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGL-----PLESPGDGGDSPAWSRKRGAYEPPDQARM 55
            M +HN    WS++E+VL+ +           PL    DGGDSPAWSRKR  Y PP+ AR 
Sbjct: 1    MSFHNPKMPWSKLEQVLSGRAGGERHLHVVDPLAVDADGGDSPAWSRKRQEYRPPELAR- 59

Query: 56   PASALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARE 115
            P   +PYAELHAHS +SFLDGAS PEEL EEAARL L A+A+TDHDG YGVVRFAEAAR 
Sbjct: 60   PDGVVPYAELHAHSNFSFLDGASHPEELAEEAARLGLTALAVTDHDGFYGVVRFAEAARA 119

Query: 116  LDVATVFGAELSLSNVA-RTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHLAGGEKGRP 174
            L + T+FGAELSL     +  +PDP G HLLVLA G EGY RL+  I++A L GGEKGRP
Sbjct: 120  LRLPTIFGAELSLGLPGPQNGEPDPLGRHLLVLAHGHEGYARLAATISRAQLRGGEKGRP 179

Query: 175  RY-DFDQLTEAAGGHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRFGADRVSIELT 233
             Y + ++L      H  +LTGCRKGHV  AL   G              FGA+ V++ELT
Sbjct: 180  VYGELEELAAELRDHVLVLTGCRKGHVPAALLTEGVDAAARELDRLTALFGAETVAVELT 239

Query: 234  HHGHPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXXXNSIDTAAGW 293
             HGHP D +RN ALA+LA   GL  VAT   H+ATP R RL           S+D   GW
Sbjct: 240  DHGHPVDADRNDALADLAAAAGLPTVATNNVHYATPGRRRLATTVAAVRARRSLDEIDGW 299

Query: 294  LAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPFDVPDGHTEDS 351
            L      HLRSG EMA  F   P  VA AA+ G + AF L L+AP+LP + VP GHTE S
Sbjct: 300  LPAAATAHLRSGAEMAARFAAYPGAVARAAEYGAELAFDLQLVAPRLPAYPVPPGHTEMS 359

Query: 352  WLRHLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDITQFCRDNNILC 411
            WLR L M GA  RYGPPE  P+AYAQ+EHELR+IE L FPGYFLVV+DI  FCR  +I C
Sbjct: 360  WLRRLTMDGARERYGPPEAHPEAYAQLEHELRMIEDLGFPGYFLVVYDIVAFCRAQDIYC 419

Query: 412  QGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESDLRENVIQYVY 471
            QGRGSAANSAVCYAL +TNVD + + LLFERFL+P RDGPPDID+DIESD RE VIQ+VY
Sbjct: 420  QGRGSAANSAVCYALRITNVDAVRHRLLFERFLAPERDGPPDIDVDIESDRREEVIQHVY 479

Query: 472  ERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGRPDSPDVAEIP 531
             RYGR++ AQVANVI+YR RSA+RD+A+A GFS GQQDAWSK + RW G   + DVA+IP
Sbjct: 480  ARYGREHTAQVANVISYRPRSAVRDVAKAFGFSPGQQDAWSKQIDRW-GSVAAVDVADIP 538

Query: 532  EQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGL 591
            EQV+  AN++   PRH+GIHSGGMVICDRP+ +VCPVEW RM  RSVLQWDKDDCAA+GL
Sbjct: 539  EQVVAYANELQTFPRHLGIHSGGMVICDRPVIEVCPVEWGRMPGRSVLQWDKDDCAAVGL 598

Query: 592  VKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRA 651
            VKFD+LGLGMLSALHY  DL+    G  +DL  + L +P VY+ML RADSVGVFQVESRA
Sbjct: 599  VKFDLLGLGMLSALHYGYDLI----GSRLDLGDMTLDDPEVYDMLCRADSVGVFQVESRA 654

Query: 652  QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKT 711
            QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYI+R+NGQEPVTY HP M  AL+KT
Sbjct: 655  QMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIRRKNGQEPVTYAHPLMRNALEKT 714

Query: 712  LGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITG 771
            LGVPLFQEQLMQLA+D AGF AA ADQLRRAMG+KRS  +M ++  R Y GM ER GITG
Sbjct: 715  LGVPLFQEQLMQLAIDLAGFDAAGADQLRRAMGAKRSVERMAQIADRLYAGMAER-GITG 773

Query: 772  VVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQ 831
             +AD +Y KL AFA++GFPESH++SFA LV+ SSW K +HP  F AALL AQPMGFYSPQ
Sbjct: 774  ELADDVYRKLTAFASYGFPESHAMSFAYLVYASSWLKRYHPGPFLAALLNAQPMGFYSPQ 833

Query: 832  SLVADARRHGVTVHGPDVNASLAHAGLENR-------------------GLDVRLGLGSV 872
            +L  DARRHGV V  PD+NAS A A LE+                    G  VRLGLGSV
Sbjct: 834  TLADDARRHGVEVRRPDINASGAKAVLESTPETRWGSVPGEPPHAWGLGGPAVRLGLGSV 893

Query: 873  RHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATAGALGCFGITRREGLWA 932
            R +G+D+A+RI  ER A+G +  + DL  RV LT  Q EALATA A  CFG+TRR+ LWA
Sbjct: 894  RTLGEDVAERIEAERAAHGPYRDMPDLARRVGLTAAQLEALATADAFACFGLTRRQALWA 953

Query: 933  AGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVWATGISPDSYPTEYLRKHLDSLG 992
            AGAAA  RP RLPG  +    P LPGM+A++   ADVWATG+SP+S+P  ++R  LD LG
Sbjct: 954  AGAAAQDRPGRLPGTVTGADPPTLPGMAAVDRLVADVWATGLSPESHPARFIRDRLDELG 1013

Query: 993  VVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLEDEKGMVNVLCAPGVWSRYRK 1052
             VP  RL  V  G RI V G VTHRQRPATA GVTF+NLEDE GM+NV C+PG+W RYR+
Sbjct: 1014 AVPIARLGQVPPGQRIRVGGIVTHRQRPATAGGVTFLNLEDETGMLNVTCSPGLWQRYRR 1073

Query: 1053 VAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRDFR 1095
            +A+T+ AL+VRG +Q   G   + ADR+DA+   V   SRDFR
Sbjct: 1074 IARTSGALVVRGRLQRHEGVTNLTADRLDAIEPPVTPASRDFR 1116


>tr|Q0RNQ7|Q0RNQ7_FRAAA Tax_Id=326424 SubName: Full=Putative DNA
            polymerase III (ALPHA CHAIN) DNAE2 (DNA
            NUCLEOTIDYLTRANSFERASE); EC=2.7.7.7;[Frankia alni]
          Length = 1106

 Score = 1314 bits (3400), Expect = 0.0
 Identities = 683/1083 (63%), Positives = 795/1083 (73%), Gaps = 19/1083 (1%)

Query: 31   PGDGGDSPAWSRKRGAYEPPDQARMP-ASALPYAELHAHSAYSFLDGASTPEELVEEAAR 89
            PGDGGDSPAWSRKR  Y P    R   A+A+PYAELH HSA+SFLDGAS PE+LVEEA R
Sbjct: 25   PGDGGDSPAWSRKRAPYRPRAGLRAASAAAVPYAELHCHSAFSFLDGASQPEDLVEEAVR 84

Query: 90   LNLRAIALTDHDGLYGVVRFAEAARELDVATVFGAELSL-SNVARTEDPDPPGPHLLVLA 148
            L L A+ALTDHDGLYGVVRFAEAARE+ + TVFGAE+SL +  AR  + DP G HLLVLA
Sbjct: 85   LGLSALALTDHDGLYGVVRFAEAAREVGLRTVFGAEISLGARAARAGETDPDGDHLLVLA 144

Query: 149  RGPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAGGHWHILTGCRKGHVRQALSDGG 208
            R PEGYRRL+R ++ AHLAGGEKGR   + +    AAGGHW +LTGCRKG V +AL+  G
Sbjct: 145  RDPEGYRRLARLLSDAHLAGGEKGRLVAEPEACARAAGGHWQVLTGCRKGTVPRALARSG 204

Query: 209  PXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAPRFGLGVVATTAAHFAT 268
            P           + FG + V++EL  H HP D  RN ALAELA    L +VAT   H+A 
Sbjct: 205  PAAAGAALAELAELFGRENVAVELADHAHPLDSARNDALAELARTARLPLVATGNVHYAA 264

Query: 269  PSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQ 326
            P   RL           S+    GWL   G  HLRSG EMA+ F   P  V  AA +G +
Sbjct: 265  PGAARLAAAMAAVRARRSLAEMDGWLPAAGTAHLRSGAEMAQRFARFPTAVEQAARIGAE 324

Query: 327  CAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPP--ERAPKAYAQIEHELRI 384
            CAF L L+AP+LP F VP GHTE SWLR L M GAARRYGP   ER   AY Q+ HEL +
Sbjct: 325  CAFDLHLVAPRLPDFPVPPGHTEASWLRLLTMQGAARRYGPAGQERIAGAYDQLAHELGL 384

Query: 385  IEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTNVDPIANDLLFERFL 444
            IEQL FPGYFL+VHDI +FCR + ILCQGRGSAANSAVCYALG+T VD ++  LLFERFL
Sbjct: 385  IEQLGFPGYFLIVHDIVEFCRRHRILCQGRGSAANSAVCYALGITGVDAVSFGLLFERFL 444

Query: 445  SPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRGRSAIRDMARALGFS 504
            +P RDGPPDID+DIES  RE VIQYVY RYGRD AAQVANVITYR RSA+RD+ARALGFS
Sbjct: 445  APERDGPPDIDLDIESGRREEVIQYVYRRYGRDRAAQVANVITYRPRSAVRDVARALGFS 504

Query: 505  QGQQDAWSKHLSRWD----GRPDSPDVA----EIPEQVIELANQIANLPRHMGIHSGGMV 556
             GQQDAWS+ L RW     G P S D      +IP +V +LA+++   PRH+GIHSGGMV
Sbjct: 505  AGQQDAWSRQLDRWSLPAAGPPPSGDGGGPEHDIPPEVTQLADRLLGFPRHLGIHSGGMV 564

Query: 557  ICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDMLGLGMLSALHYAIDLVAEHK 616
            ICDRP+ +V PVEWARM  R+V+QWDKDDCAA GLVKFD+LGLGMLS LH A DL+  H 
Sbjct: 565  ICDRPVGEVVPVEWARMPGRTVIQWDKDDCAAAGLVKFDLLGLGMLSMLHKAFDLIRGHH 624

Query: 617  GIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATLPRLKPREFYDLVVEVALIRP 676
            G ++DL+ +   +PAVY+ML  ADS+GVFQVESRAQMATLPRL+PR FYDLVVEVALIRP
Sbjct: 625  GRDLDLSLIPPEDPAVYDMLCAADSIGVFQVESRAQMATLPRLRPRRFYDLVVEVALIRP 684

Query: 677  GPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPLFQEQLMQLAVDCAGFSAAEA 736
            GPIQGGSVHPYI+RRNG E VTY HP +  +L KTLGVPLFQEQLMQ+A+D AGFSAAEA
Sbjct: 685  GPIQGGSVHPYIRRRNGAEEVTYPHPLLRRSLAKTLGVPLFQEQLMQMAIDIAGFSAAEA 744

Query: 737  DQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADRIYEKLEAFANFGFPESHSLS 796
            D+LRRAMGSKRS  ++ RLR R Y GM    GITG +AD ++ KL AFANFGFPESHS+S
Sbjct: 745  DELRRAMGSKRSADRIERLRERLYTGM-AASGITGALADDLFTKLSAFANFGFPESHSVS 803

Query: 797  FASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVADARRHGVTVHGPDVNASLAHA 856
            FA LV+ SSW KL++PAAFCAALL AQPMGFYSPQSLVADARRHGV V  PDVNAS   A
Sbjct: 804  FAFLVYASSWIKLYYPAAFCAALLNAQPMGFYSPQSLVADARRHGVEVLRPDVNASAVGA 863

Query: 857  GLENRGLDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATA 916
             L      VRLGL  VR +G+ LA+RIV+ R A G +  + DL  RV L+V Q EALATA
Sbjct: 864  SLVGAQPRVRLGLSGVRRVGESLARRIVETRVAGGPYAGMADLVRRVGLSVDQVEALATA 923

Query: 917  GALGCFGITRREGLWAAGAAATQRPDRLPGVGSSTHI----PPLPGMSALELSAADVWAT 972
            GA  CFG+ RRE LWAAGA A  RPDRL G+     +    P LPGM+ +E S AD+WAT
Sbjct: 924  GAFACFGVARREALWAAGAVAQARPDRLDGMVFGADVAAVAPYLPGMTGVEESVADLWAT 983

Query: 973  GISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLE 1032
            GI+ + YPT +LR+ L + GV     L D   G R+LVAG VTHRQRPATA G TF+NLE
Sbjct: 984  GITTEGYPTRFLRERLAAQGVTAAAGLRDAEAGRRVLVAGIVTHRQRPATAGGTTFVNLE 1043

Query: 1033 DEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSR 1092
            DE G+VNV+C+PGVW+R+R VA+TA AL+VRG ++ A G   V+A+RM  + + V SRSR
Sbjct: 1044 DETGLVNVICSPGVWARHRIVARTAVALVVRGRLERAEGVTNVIAERMWPLPVAVTSRSR 1103

Query: 1093 DFR 1095
            DFR
Sbjct: 1104 DFR 1106


>tr|A8LY60|A8LY60_SALAI Tax_Id=391037 SubName: Full=DNA polymerase
            III, alpha subunit; EC=2.7.7.7;[Salinispora arenicola]
          Length = 1124

 Score = 1295 bits (3352), Expect = 0.0
 Identities = 678/1133 (59%), Positives = 802/1133 (70%), Gaps = 47/1133 (4%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGL-------------PLESPGDGGDSPAWSRKRGAY 47
            M +HN    WSE+ERVLT +P R                PL    DGGD+ AW+ KR   
Sbjct: 1    MSFHNPDLPWSELERVLTGRPARGQRRTQDGERHLHVVDPLAVDADGGDAAAWAGKRQHR 60

Query: 48   EPPDQARMPASALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVV 107
             PP  +R P  A+PYAELH H+ +SFLDGAS PEEL EEA RL L A+A+TDHDG YGVV
Sbjct: 61   TPPAVSR-PDDAVPYAELHTHTNFSFLDGASHPEELAEEATRLGLTALAVTDHDGFYGVV 119

Query: 108  RFAEAARELDVATVFGAELSLSNVARTE-DPDPPGPHLLVLARGPEGYRRLSREIAKAHL 166
            RFAEAAR L + T+FGAELSL        +PDP G HLL+LA G EGY RL+  I++A L
Sbjct: 120  RFAEAARALHLPTIFGAELSLDLPGPPNGEPDPLGRHLLLLAHGHEGYARLAATISRAQL 179

Query: 167  AGGEKGRPRYDFDQLTEAAG---GHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRF 223
             GGEKGRP Y   +L E A     H  +LTGCRKGHV  AL   G              F
Sbjct: 180  RGGEKGRPVYG--ELAEVAAELRDHVLVLTGCRKGHVPAALLTEGVDAAARELDRLTALF 237

Query: 224  GADRVSIELTHHGHPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXX 283
            GA+ V++ELT HGHP D +RN ALAELA   GL  VAT   H+ATP R RL         
Sbjct: 238  GAETVAVELTDHGHPVDADRNDALAELADAAGLPTVATNNVHYATPGRRRLATTLAAVRA 297

Query: 284  XNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPF 341
              S+D   GWL   G  HLRSG EMA  F   P  VA AA+ G + AF L L+AP LP +
Sbjct: 298  RRSLDEIDGWLPAAGTAHLRSGAEMAARFAAYPGAVARAAEFGAELAFDLQLVAPALPAY 357

Query: 342  DVPDGHTEDSWLRHLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDIT 401
             VP GHTE SWLRHL   GA  RYGPPE  P+AYAQ+EHEL +IE+L FPGYFLVV+DI 
Sbjct: 358  PVPSGHTEMSWLRHLTARGARERYGPPEAHPEAYAQLEHELNMIEELGFPGYFLVVYDIV 417

Query: 402  QFCRDNNILCQGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESD 461
             FCR+ +I CQGRGSAANSAVCYAL +TNVD + + LLFERFL+P RDGPPDID+DIES 
Sbjct: 418  TFCREQDIYCQGRGSAANSAVCYALRITNVDAVRHRLLFERFLAPERDGPPDIDVDIESH 477

Query: 462  LRENVIQYVYERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGR 521
             RE VIQ+VY RYGR++ AQVANVI+YR RSA+RD+A+A GFS GQQDAWSK + RW G 
Sbjct: 478  RREEVIQHVYARYGREHTAQVANVISYRPRSAVRDVAKAFGFSPGQQDAWSKQVDRW-GS 536

Query: 522  PDSPDVAEIPEQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQW 581
                D   IPE V+  A+ +   PRH+GIHSGGMVICDRP+ +VCPVEW RM  RSVLQW
Sbjct: 537  VAEVDAEGIPEPVVAYADAVQTFPRHLGIHSGGMVICDRPVIEVCPVEWGRMPGRSVLQW 596

Query: 582  DKDDCAAIGLVKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADS 641
            DKDDCAA+GLVKFD+LGLGML+ALH+  D++    G  ++L  + L +  VY+ML RAD+
Sbjct: 597  DKDDCAAVGLVKFDLLGLGMLAALHHGYDMI----GTRLELGDMTLDDSEVYDMLCRADA 652

Query: 642  VGVFQVESRAQMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDH 701
            VGVFQVESRAQMATLPRL+PR FYDLVVEVALIRPGPIQGGSVHPYI+R+NGQEPVTY H
Sbjct: 653  VGVFQVESRAQMATLPRLRPRCFYDLVVEVALIRPGPIQGGSVHPYIRRKNGQEPVTYPH 712

Query: 702  PSMEPALKKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYD 761
            P M  AL+KTLGVPLFQEQLMQLA+D AGF AAEADQLRRAMG+KRS  +M R+  R Y 
Sbjct: 713  PLMRNALEKTLGVPLFQEQLMQLAIDLAGFDAAEADQLRRAMGAKRSVERMARIADRLYA 772

Query: 762  GMRERHGITGVVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLR 821
            GM ER GITG +AD +Y KL AFA++GFPESH++SFA LV+ SSW K +HPA F AALL 
Sbjct: 773  GMAER-GITGELADDVYRKLTAFASYGFPESHAMSFAYLVYASSWLKRYHPAPFLAALLN 831

Query: 822  AQPMGFYSPQSLVADARRHGVTVHGPDVNASLAHAGLENR-------------------G 862
            AQPMGFYSPQ+LV DARRHGV V  PDVNAS A A LE+                    G
Sbjct: 832  AQPMGFYSPQTLVDDARRHGVEVRRPDVNASGAGAVLESTPNTRWGSQPGEPPHAWGLGG 891

Query: 863  LDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATAGALGCF 922
              VRLGL  VR +G ++A+RIV ER A+G +  + DL  R  LT  Q EALATA A  CF
Sbjct: 892  PAVRLGLDGVRALGAEVAERIVAERTAHGLYQDMSDLARRAGLTAAQLEALATADAFACF 951

Query: 923  GITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVWATGISPDSYPTE 982
            G+TRR+ LWAAGAAA  RPDRLPG    T  P LPGM+A++   ADVWATG+SP+S+P  
Sbjct: 952  GVTRRQALWAAGAAAQDRPDRLPGTVPGTVAPTLPGMAAVDRLVADVWATGLSPESHPAR 1011

Query: 983  YLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLEDEKGMVNVLC 1042
            ++R  LD+LG VP D+L  V  G RI V G VTHRQRPATA GVTF+NLEDE GM+NV C
Sbjct: 1012 FIRDQLDALGAVPIDQLARVEPGRRIRVGGIVTHRQRPATAGGVTFLNLEDETGMLNVTC 1071

Query: 1043 APGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRDFR 1095
            +PG+W RYR+VA+++ AL+VRG++Q   G + ++ADR+D ++L+V   +RDFR
Sbjct: 1072 SPGLWQRYRQVAKSSGALVVRGLLQRYDGVINLIADRLDPIDLQVRLAARDFR 1124


>tr|A4X9U2|A4X9U2_SALTO Tax_Id=369723 SubName: Full=DNA polymerase
            III, alpha subunit; EC=2.7.7.7;[Salinispora tropica]
          Length = 1124

 Score = 1277 bits (3304), Expect = 0.0
 Identities = 672/1133 (59%), Positives = 794/1133 (70%), Gaps = 47/1133 (4%)

Query: 1    MGWHNGPPSWSEMERVLTSKPRRSGL-------------PLESPGDGGDSPAWSRKRGAY 47
            M ++N    WSE+ERVL+ +  R                PL    DGGD+PA + +R  +
Sbjct: 1    MSFYNPDLPWSELERVLSGESTRGQRRTRDGQRHLHVVDPLAVEADGGDAPARAGRRPHH 60

Query: 48   EPPDQARMPASALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVV 107
             PP  AR P   +PYAELH H+ +SFLDGAS PEEL EEA RL L A+A+TDHDG YGVV
Sbjct: 61   PPPATAR-PDDVVPYAELHTHTNFSFLDGASHPEELAEEAVRLGLTALAVTDHDGFYGVV 119

Query: 108  RFAEAARELDVATVFGAELSLSNV-ARTEDPDPPGPHLLVLARGPEGYRRLSREIAKAHL 166
            RFAEAAR L + TVFGAELSL    A   +PDP G HLL+LA G EGY RL+  I++A L
Sbjct: 120  RFAEAARALHLPTVFGAELSLDLPGAPNGEPDPLGRHLLLLAHGHEGYARLAATISRAQL 179

Query: 167  AGGEKGRPRYDFDQLTEAAG---GHWHILTGCRKGHVRQALSDGGPXXXXXXXXXXVDRF 223
             GGEKGRP Y   +L E A     H  +LTGCRKGHV  AL   G              F
Sbjct: 180  RGGEKGRPIYG--ELAEVAAELRDHVLVLTGCRKGHVPAALLTEGVDAAARELDRLTALF 237

Query: 224  GADRVSIELTHHGHPCDDERNAALAELAPRFGLGVVATTAAHFATPSRGRLXXXXXXXXX 283
            GA+ V++ELT HGHP D +RN ALAELA   GL  VAT   H+ATP R RL         
Sbjct: 238  GAETVAVELTDHGHPIDADRNDALAELAEAAGLPTVATNNVHYATPGRRRLATTLAAVRA 297

Query: 284  XNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQCAFGLALIAPQLPPF 341
              S+D   GWL   G  HLRSG EMA  F   P  VA AA+ G + AF L L+AP LP +
Sbjct: 298  RRSLDEIDGWLPAAGAAHLRSGAEMAARFAAYPGAVARAAEFGAELAFDLQLVAPALPAY 357

Query: 342  DVPDGHTEDSWLRHLAMAGAARRYGPPERAPKAYAQIEHELRIIEQLRFPGYFLVVHDIT 401
             V  GHTE SWLRHL   GA  RYGPPE  P+AYAQ+EHEL +IE+L FPGYFLVV+DI 
Sbjct: 358  PVASGHTEMSWLRHLTARGARERYGPPEAHPEAYAQLEHELNMIEELGFPGYFLVVYDIV 417

Query: 402  QFCRDNNILCQGRGSAANSAVCYALGVTNVDPIANDLLFERFLSPARDGPPDIDIDIESD 461
             FCR+ +I CQGRGSAANSAVCYAL +TNVD + + LLFERFL+P RDGPPDID+DIES 
Sbjct: 418  TFCREQDIYCQGRGSAANSAVCYALRITNVDAVRHRLLFERFLAPERDGPPDIDVDIESS 477

Query: 462  LRENVIQYVYERYGRDYAAQVANVITYRGRSAIRDMARALGFSQGQQDAWSKHLSRWDGR 521
             RE VIQ+VY RYGR++ AQVANVI+YR RSA+RD+A+A GFS GQQDAWSK + RW G 
Sbjct: 478  RREEVIQHVYARYGREHTAQVANVISYRPRSAVRDVAKAFGFSPGQQDAWSKQIDRW-GS 536

Query: 522  PDSPDVAEIPEQVIELANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQW 581
              + DV  IPE V+  A+ +   PRH+GIHSGGMVICDRP+ +VCPVEW RM  RSVLQW
Sbjct: 537  VAAADVEGIPEPVVAYADAVQTFPRHLGIHSGGMVICDRPVIEVCPVEWGRMPGRSVLQW 596

Query: 582  DKDDCAAIGLVKFDMLGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADS 641
            DKDDCAA+GLVKFD+LGLGML+ALH+  D++    G  ++L  + L +  VY+ML RAD+
Sbjct: 597  DKDDCAAVGLVKFDLLGLGMLAALHHGYDMI----GARLELGDMTLDDDEVYDMLCRADA 652

Query: 642  VGVFQVESRAQMATLPRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDH 701
            VGVFQVESRAQMATLPRLKPR FYDLVVEVALIRPGPIQGGSVHPYI+R+NGQEPVT+ H
Sbjct: 653  VGVFQVESRAQMATLPRLKPRCFYDLVVEVALIRPGPIQGGSVHPYIRRKNGQEPVTFPH 712

Query: 702  PSMEPALKKTLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYD 761
            P M  AL+KTLGVPLFQEQLMQLA+D AGF AAEADQLRRAMG+KRS  +M R+  R Y 
Sbjct: 713  PLMRNALEKTLGVPLFQEQLMQLAIDLAGFDAAEADQLRRAMGAKRSAERMARIADRLYA 772

Query: 762  GMRERHGITGVVADRIYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLR 821
            GM ER GITG +AD +Y KL AFA++GFPESH++SFA LV+ SSW K +HPA F AALL 
Sbjct: 773  GMAER-GITGELADDVYRKLTAFASYGFPESHAMSFAYLVYASSWLKRYHPAPFLAALLN 831

Query: 822  AQPMGFYSPQSLVADARRHGVTVHGPDVNASLAHAGLENR-------------------G 862
            AQPMGFYSPQ+LV DARRHGV V  PDVNAS A A LE+                    G
Sbjct: 832  AQPMGFYSPQTLVDDARRHGVEVRRPDVNASGAGAVLESTPSTRWGSQPGEPPHAWGLGG 891

Query: 863  LDVRLGLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQLTVPQTEALATAGALGCF 922
              VRLGL SVR +G ++A RI  ER A G +  + DL  RV LT  Q EALATA A  CF
Sbjct: 892  PAVRLGLDSVRTLGGEVAGRIETERAARGPYRDMSDLARRVGLTAAQLEALATADAFACF 951

Query: 923  GITRREGLWAAGAAATQRPDRLPGVGSSTHIPPLPGMSALELSAADVWATGISPDSYPTE 982
            G+TRR+ LW+AGAAA + PDRLPG    T  P LPGM A++   ADVWATG+SP+S+P  
Sbjct: 952  GVTRRQALWSAGAAAQEHPDRLPGTVPGTVAPTLPGMGAVDRLVADVWATGLSPESHPAR 1011

Query: 983  YLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPATAQGVTFINLEDEKGMVNVLC 1042
            ++R+ LD+LG VP  RL  V  G R+ V G VTHRQRPATA GVTF+NLEDE GM+NV C
Sbjct: 1012 FVREQLDALGAVPIARLARVEPGRRVRVGGIVTHRQRPATAGGVTFLNLEDETGMLNVTC 1071

Query: 1043 APGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMDAVNLRVGSRSRDFR 1095
            +PG+W RYR+VA+ +  L+VRG++    G +   ADR+D + L V   +RDFR
Sbjct: 1072 SPGLWQRYRQVAKNSGGLVVRGLLHRHEGVINFTADRLDPIELPVRPAARDFR 1124


>tr|D1VJQ4|D1VJQ4_9ACTO Tax_Id=298654 SubName: Full=DNA polymerase
            III, alpha subunit;[Frankia sp. EuI1c]
          Length = 1213

 Score = 1263 bits (3268), Expect = 0.0
 Identities = 688/1214 (56%), Positives = 796/1214 (65%), Gaps = 136/1214 (11%)

Query: 17   LTSKPRRSGLPLESPGDGGDSPAWSRKRGAYEPPDQ-------------------ARMPA 57
            ++ +P + G      GDGGD+PAWSR R  Y P  +                   AR   
Sbjct: 1    MSGRPPQPGGQGGPEGDGGDAPAWSRHREPYRPAPELVAAAAAARAEGAPGVDGAARPAP 60

Query: 58   SALPYAELHAHSAYSFLDGASTPEELVEEAARLNLRAIALTDHDGLYGVVRFAEAARELD 117
            +A PYAELH HSA+SFLDGAS PE+LVEEAARL L A+ALTDHDG+YGVVRFAEAA ++ 
Sbjct: 61   AAAPYAELHCHSAFSFLDGASQPEDLVEEAARLGLSALALTDHDGMYGVVRFAEAAEQVG 120

Query: 118  VATVFGAELSL----------------------------SNVARTEDPDPPGPHLLVLAR 149
            + T++G E+SL                            +   R   PDP G HLLVLAR
Sbjct: 121  LRTLYGVEVSLAPGPDRPVPGPDTGEPRPGPRRPGPPGEAPAPRPGVPDPVGDHLLVLAR 180

Query: 150  GPEGYRRLSREIAKAHLAGGEKGRPRYDFDQLTEAAG-GHWHILTGCRKGHVRQALSDGG 208
             PEGYRRLSR ++ AHLAGGEKGRP    D L  AAG GHW ILTGCRKG V  AL+ GG
Sbjct: 181  TPEGYRRLSRAVSDAHLAGGEKGRPLTSLDVLAAAAGDGHWQILTGCRKGLVPAALAAGG 240

Query: 209  PXXXXXXXXXXVDRFGADRVSIELTHHGHPCDDERNAALAELAPRFGLGVVATTAAHFAT 268
                       V RFG D V++EL  H HP D +RN AL  LA   GL  VAT   H+AT
Sbjct: 241  LDAARVALDGLVGRFGRDNVAVELWDHAHPLDSDRNDALYGLAQEAGLTCVATNNVHYAT 300

Query: 269  PSRGRLXXXXXXXXXXNSIDTAAGWLAPLGGVHLRSGEEMARLFD--PEFVAAAADLGEQ 326
            PS GRL           S+D   G L P G  HLRSG EM   F   P  V AAA +G +
Sbjct: 301  PSAGRLAAVMASIRARRSLDEMDGHLPPAGAAHLRSGAEMTDRFARYPGAVEAAARVGTE 360

Query: 327  CAFGLALIAPQLPPFDVPDGHTEDSWLRHLAMAGAARRYGPP--ERAPKAYAQIEHELRI 384
             AF L L+AP+LP F VP GHTE SWLR L M GAARRYGPP  ER   AY Q+ HEL +
Sbjct: 361  SAFNLRLVAPRLPDFPVPPGHTEASWLRLLTMQGAARRYGPPVRERVGGAYDQLAHELTL 420

Query: 385  IEQLRFPGYFLVVHDITQFCRDNNILCQGRGSAANSAVCYALGVTNVDPIANDLLFERFL 444
            IE L FPGYFL+VHDI +FCR  +ILCQGRGSAANSAVCYALG+T VD ++  LLFERFL
Sbjct: 421  IESLGFPGYFLIVHDIVEFCRREDILCQGRGSAANSAVCYALGITGVDAVSFGLLFERFL 480

Query: 445  SPARDGPPDIDIDIESDLRENVIQYVYERYGRDYAAQVANVITYRGRSAIRDMARALGFS 504
            +P RDGPPDID+DIES  RE VIQYVY RYGRD AAQVANVI+YR RSA+RD+ARALGFS
Sbjct: 481  APERDGPPDIDLDIESGRREEVIQYVYGRYGRDRAAQVANVISYRSRSAVRDVARALGFS 540

Query: 505  QGQQDAWSKHLSRWD----GRPDSPDVA------------------------EIPEQVIE 536
             GQQDAWS  + RW       P +P  A                         IP +V+ 
Sbjct: 541  PGQQDAWSSGIDRWSPLPAAAPPAPPAAVPAVPAAVTPGPGQAVEPADRIGTAIPVEVVG 600

Query: 537  LANQIANLPRHMGIHSGGMVICDRPIADVCPVEWARMENRSVLQWDKDDCAAIGLVKFDM 596
            LA Q+   PRH+GIHSGGMVICDRP+A+V PVEWARM  R+V+QWDKDDCA  GLVKFD+
Sbjct: 601  LAGQLLGFPRHLGIHSGGMVICDRPVAEVVPVEWARMPGRTVIQWDKDDCAVAGLVKFDL 660

Query: 597  LGLGMLSALHYAIDLVAEHKGIEVDLATLDLSEPAVYEMLQRADSVGVFQVESRAQMATL 656
            LGLGML ALH A  L+ +H G  +DL  +   +PAVY+ML  ADS+GVFQVESRAQMATL
Sbjct: 661  LGLGMLGALHLAFALIRDHHGRHLDLGEIPPEDPAVYDMLCAADSIGVFQVESRAQMATL 720

Query: 657  PRLKPREFYDLVVEVALIRPGPIQGGSVHPYIKRRNGQEPVTYDHPSMEPALKKTLGVPL 716
            PRL+PR FYDLVVEVALIRPGPIQGGSVHPYI+RRN  E VTY HP +E +LKKTLG+PL
Sbjct: 721  PRLRPRRFYDLVVEVALIRPGPIQGGSVHPYIRRRNDLEEVTYPHPLLERSLKKTLGIPL 780

Query: 717  FQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTAKMRRLRSRFYDGMRERHGITGVVADR 776
            FQEQLMQ+A+D AGF+AAEADQLRRAMG+KR+T ++ RLR RFY GM   +GITG  AD 
Sbjct: 781  FQEQLMQMAIDVAGFTAAEADQLRRAMGAKRATERIDRLRERFYQGM-ATNGITGAAADE 839

Query: 777  IYEKLEAFANFGFPESHSLSFASLVFYSSWFKLHHPAAFCAALLRAQPMGFYSPQSLVAD 836
            +Y KL AFANFGFPESHS+SFA LV+ S+W KL++PAAFCAALL AQPMGFYSPQSLVAD
Sbjct: 840  LYTKLAAFANFGFPESHSVSFAFLVYASAWIKLYYPAAFCAALLNAQPMGFYSPQSLVAD 899

Query: 837  ARRHGVTVHGPDVNASLAHAGLENRGLDVRL----------------------------- 867
            ARRHGVTVHGPD+NAS A A L   G    L                             
Sbjct: 900  ARRHGVTVHGPDLNASGAGAILTGEGRPAGLAEPVWDGEPAGEPVGDVPAPARIGVGAAA 959

Query: 868  ----------------------GLGSVRHIGDDLAQRIVDEREANGQFTSLLDLTSRVQL 905
                                  GL  VR IG   A+RIV  R+  G +  + DL  R  L
Sbjct: 960  GQAPPNGEADGLTGPRHPAVRLGLAGVRLIGTANAERIVAARDVGGPYRDMADLARRTGL 1019

Query: 906  TVPQTEALATAGALGCFGITRREGLWAAGAAATQRPDRLPG---VGSSTHIPP-LPGMSA 961
               Q EALATAGA GCFG+ RRE LWAAGAAA  RPDRL G   VG    +   LPGMS 
Sbjct: 1020 AAAQLEALATAGAFGCFGLARREALWAAGAAAQARPDRLEGTALVGDPAAVAAHLPGMSG 1079

Query: 962  LELSAADVWATGISPDSYPTEYLRKHLDSLGVVPTDRLLDVADGTRILVAGAVTHRQRPA 1021
             E   AD+WATGI+P  YPTE++R  LD+LGVV   RL  +    R++VAG VTHRQRPA
Sbjct: 1080 AEEIVADLWATGITPSRYPTEFVRDRLDALGVVVATRLARLPGDRRVVVAGVVTHRQRPA 1139

Query: 1022 TAQGVTFINLEDEKGMVNVLCAPGVWSRYRKVAQTAPALIVRGIVQNATGAVTVVADRMD 1081
            TA G TF+NLEDE G+VNV+C+ GVW R+R VA +APALIVRG ++ A G V V+A+R++
Sbjct: 1140 TAGGTTFLNLEDETGLVNVICSRGVWVRHRVVATSAPALIVRGRLEKADGVVNVIAERLE 1199

Query: 1082 AVNLRVGSRSRDFR 1095
             + L V  RSRDFR
Sbjct: 1200 RLPLAVARRSRDFR 1213


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.320    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 9,338,778,800
Number of extensions: 408034868
Number of successful extensions: 989790
Number of sequences better than 10.0: 4576
Number of HSP's gapped: 970959
Number of HSP's successfully gapped: 6553
Length of query: 1095
Length of database: 4,236,830,644
Length adjustment: 149
Effective length of query: 946
Effective length of database: 2,373,158,908
Effective search space: 2245008326968
Effective search space used: 2245008326968
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 86 (37.7 bits)