BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_1737
         (291 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QT71|A0QT71_MYCS2 Tax_Id=246196 RecName: Full=Pseudouridine...   587   e-166
tr|A4TEZ4|A4TEZ4_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine...   419   e-115
tr|D5PCV2|D5PCV2_9MYCO Tax_Id=525368 SubName: Full=RNA pseudouri...   384   e-105
tr|Q7TWS5|Q7TWS5_MYCBO Tax_Id=1765 RecName: Full=Pseudouridine s...   381   e-104
tr|A1T5K0|A1T5K0_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine...   381   e-104
tr|O07166|O07166_MYCTU Tax_Id=1773 RecName: Full=Pseudouridine s...   380   e-104
tr|C6DL37|C6DL37_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine...   380   e-104
tr|C1AH74|C1AH74_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine...   380   e-104
tr|A5WSL5|A5WSL5_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine...   380   e-104
tr|A5U7X4|A5U7X4_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine...   380   e-104
tr|A1KNV2|A1KNV2_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine...   380   e-104
tr|D6G390|D6G390_MYCTU Tax_Id=478435 SubName: Full=Putative unch...   380   e-104
tr|D6FRK2|D6FRK2_MYCTU Tax_Id=611304 SubName: Full=Putative unch...   380   e-104
tr|D6FLK7|D6FLK7_MYCTU Tax_Id=611303 SubName: Full=Putative unch...   380   e-104
tr|D6F9V0|D6F9V0_MYCTU Tax_Id=611302 SubName: Full=Putative unch...   380   e-104
tr|D5ZLH9|D5ZLH9_MYCTU Tax_Id=537210 SubName: Full=Putative unch...   380   e-104
tr|D5Z8E5|D5Z8E5_MYCTU Tax_Id=537209 SubName: Full=Putative unch...   380   e-104
tr|D5YWQ2|D5YWQ2_MYCTU Tax_Id=515616 SubName: Full=Putative unch...   380   e-104
tr|D5XYX2|D5XYX2_MYCTU Tax_Id=515617 SubName: Full=Putative unch...   380   e-104
tr|A4KLJ4|A4KLJ4_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine...   380   e-104
tr|A2VP94|A2VP94_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine...   380   e-104
tr|A0QKH9|A0QKH9_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine...   379   e-103
tr|Q73UE6|Q73UE6_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine s...   378   e-103
tr|Q1BCM1|Q1BCM1_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine...   378   e-103
tr|A3PW03|A3PW03_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine...   378   e-103
tr|A1UCC2|A1UCC2_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine...   378   e-103
tr|Q7D5R2|Q7D5R2_MYCTU Tax_Id=1773 RecName: Full=Pseudouridine s...   377   e-103
tr|D5YJR8|D5YJR8_MYCTU Tax_Id=520140 SubName: Full=Putative unch...   374   e-102
tr|B2HDX3|B2HDX3_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine...   363   1e-98
tr|A0PRL6|A0PRL6_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine...   363   2e-98
tr|D5Y8N6|D5Y8N6_MYCTU Tax_Id=520141 SubName: Full=Putative unch...   326   2e-87
tr|B1MFY3|B1MFY3_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine...   297   1e-78
tr|D5PY40|D5PY40_COREQ Tax_Id=525370 SubName: Full=RNA pseudouri...   292   4e-77
tr|D6K8J5|D6K8J5_9ACTO Tax_Id=645465 SubName: Full=RNA pseudouri...   288   6e-76
tr|Q828G2|Q828G2_STRAW Tax_Id=33903 RecName: Full=Pseudouridine ...   283   1e-74
tr|Q0SIE7|Q0SIE7_RHOSR Tax_Id=101510 SubName: Full=Possible pseu...   283   2e-74
tr|C8X7A1|C8X7A1_NAKMY Tax_Id=479431 RecName: Full=Pseudouridine...   282   3e-74
tr|A4FF01|A4FF01_SACEN Tax_Id=405948 RecName: Full=Pseudouridine...   282   3e-74
tr|C1ASQ9|C1ASQ9_RHOOB Tax_Id=632772 SubName: Full=Putative pseu...   282   4e-74
tr|D5ZSA5|D5ZSA5_9ACTO Tax_Id=566461 SubName: Full=Ribosomal pse...   279   3e-73
tr|B4VA90|B4VA90_9ACTO Tax_Id=465541 RecName: Full=Pseudouridine...   279   3e-73
tr|D1BBJ7|D1BBJ7_SANKS Tax_Id=446469 RecName: Full=Pseudouridine...   275   4e-72
tr|Q5Z1U7|Q5Z1U7_NOCFA Tax_Id=37329 SubName: Full=Putative RNA p...   275   6e-72
tr|C0ZNX4|C0ZNX4_RHOE4 Tax_Id=234621 RecName: Full=Pseudouridine...   274   8e-72
tr|C3JED9|C3JED9_RHOER Tax_Id=596309 RecName: Full=Pseudouridine...   274   1e-71

>tr|A0QT71|A0QT71_MYCS2 Tax_Id=246196 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium smegmatis]
          Length = 291

 Score =  587 bits (1513), Expect = e-166
 Identities = 291/291 (100%), Positives = 291/291 (100%)

Query: 1   MRRPAASPKGLPERPGHEGIGPARLKVQGGRLVDELERRFGAGWKVRAGEVFSRDGTVLD 60
           MRRPAASPKGLPERPGHEGIGPARLKVQGGRLVDELERRFGAGWKVRAGEVFSRDGTVLD
Sbjct: 1   MRRPAASPKGLPERPGHEGIGPARLKVQGGRLVDELERRFGAGWKVRAGEVFSRDGTVLD 60

Query: 61  ESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALV 120
           ESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALV
Sbjct: 61  ESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALV 120

Query: 121 RLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKI 180
           RLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKI
Sbjct: 121 RLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKI 180

Query: 181 ALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMASIG 240
           ALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMASIG
Sbjct: 181 ALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMASIG 240

Query: 241 LPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTLG 291
           LPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTLG
Sbjct: 241 LPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTLG 291


>tr|A4TEZ4|A4TEZ4_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium gilvum]
          Length = 286

 Score =  419 bits (1076), Expect = e-115
 Identities = 207/290 (71%), Positives = 235/290 (81%), Gaps = 7/290 (2%)

Query: 1   MRRPAASPKGLPERPGHEGIGPARLKVQGGRLVDELERRFGAGWKVRAGEVFSRDGTVLD 60
           MRRP       P  P  +G+GPAR++VQGG LV+E +RR+G G KV  GEVF  DGTV D
Sbjct: 1   MRRP-------PPLPVRDGLGPARVRVQGGLLVEEFQRRWGTGAKVVDGEVFCADGTVAD 53

Query: 61  ESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALV 120
            STVLPPG++VYLYRDLPDEV VPFDIPVL+RDDDIVVVDKPHFLATMPRG HV QTALV
Sbjct: 54  GSTVLPPGAYVYLYRDLPDEVPVPFDIPVLHRDDDIVVVDKPHFLATMPRGSHVAQTALV 113

Query: 121 RLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKI 180
           RLRRELDLPEL+PAHRLDRLTAGVLLFTVRRE+RGAYQT+F RG+  KTY+AH+      
Sbjct: 114 RLRRELDLPELSPAHRLDRLTAGVLLFTVRREVRGAYQTLFVRGEAAKTYVAHSSHATDR 173

Query: 181 ALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMASIG 240
             P T+R+R+VKHRG LQA EEPGEPNAET VE + +G+YRLTPRTGRTHQLRVHMA +G
Sbjct: 174 EFPMTIRNRLVKHRGSLQAVEEPGEPNAETVVEYLDEGMYRLTPRTGRTHQLRVHMAGLG 233

Query: 241 LPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           +PITGDP YP V+DV PGDF  PL+LLA+ L F DP+SG  R F S RTL
Sbjct: 234 IPITGDPLYPDVVDVPPGDFGSPLRLLAQALEFTDPISGELRRFTSGRTL 283


>tr|D5PCV2|D5PCV2_9MYCO Tax_Id=525368 SubName: Full=RNA
           pseudouridine synthase; EC=5.4.99.-;[Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 279

 Score =  384 bits (987), Expect = e-105
 Identities = 196/277 (70%), Positives = 228/277 (82%), Gaps = 3/277 (1%)

Query: 18  EGIGPARLKVQGGRLVDELERRFGAGW--KVRAGEVFSRDGTVLDESTVLPPGSHVYLYR 75
           +G+GPAR++++GG ++ EL  RFGA    KV AGEV   DG+ +DE+T LP G+ VYLYR
Sbjct: 3   DGLGPARVRLRGGPVLAELTGRFGASARSKVLAGEVVDADGSPVDEATALPAGASVYLYR 62

Query: 76  DLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPAH 135
           +LP+EV VPFDIPVL+RD DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PAH
Sbjct: 63  ELPEEVPVPFDIPVLHRDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPAH 122

Query: 136 RLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHRG 195
           RLDRLTAGVLLFT RRE+RGAYQT+F+RG V+KTYLA A   P + LP  +RSRI+K RG
Sbjct: 123 RLDRLTAGVLLFTARREVRGAYQTLFSRGLVRKTYLARAAVDPALVLPRVVRSRIIKRRG 182

Query: 196 RLQAFEEPGEPNAETYVE-AVGDGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVID 254
            LQA  EPG PNAET VE A  DGLYRLTPRTGRTHQLRVHMA++G+PI GDP YP ++D
Sbjct: 183 VLQAGCEPGTPNAETLVELASPDGLYRLTPRTGRTHQLRVHMAALGVPIDGDPLYPDIVD 242

Query: 255 VAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTLG 291
           V P DFS PL LLA+R+ FDDP++G RREFVSRRTLG
Sbjct: 243 VPPDDFSTPLGLLARRIAFDDPLTGERREFVSRRTLG 279


>tr|Q7TWS5|Q7TWS5_MYCBO Tax_Id=1765 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium bovis]
          Length = 305

 Score =  381 bits (979), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDNDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|A1T5K0|A1T5K0_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium vanbaalenii]
          Length = 285

 Score =  381 bits (979), Expect = e-104
 Identities = 198/292 (67%), Positives = 225/292 (77%), Gaps = 9/292 (3%)

Query: 1   MRRPAASPKGLPERPGHEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTV 58
           MRRPA  P         +G+GPAR++++GG ++ EL  RFG  A  KV  GEVF+ DG V
Sbjct: 1   MRRPAPLPV-------RDGLGPARVRLRGGAVLVELADRFGEAAAAKVLNGEVFTADGAV 53

Query: 59  LDESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTA 118
           +  STVL P S VYLYRDLPDEV VPFD+PVL+RDD++VVVDKPHFLATMPRG HV QTA
Sbjct: 54  VTASTVLQPNSVVYLYRDLPDEVAVPFDVPVLHRDDNLVVVDKPHFLATMPRGSHVAQTA 113

Query: 119 LVRLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVP 178
           LVR+RRELDLP+L+PAHRLDRLTAGVL+FT RRE+RGAYQTMFARG V KTYLA +    
Sbjct: 114 LVRMRRELDLPQLSPAHRLDRLTAGVLVFTTRREVRGAYQTMFARGGVSKTYLAQSSAGT 173

Query: 179 KIALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMAS 238
               P T+RSRI+K RG LQA EEPGEPNAET VE V D  YRL PRTGRTHQLRVHM S
Sbjct: 174 DRDFPITVRSRIIKRRGTLQAVEEPGEPNAETLVERVDDRTYRLMPRTGRTHQLRVHMNS 233

Query: 239 IGLPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           +GLPI GDP YP VIDVA GDFS PL+LLA+ L F DP++G R  F S RTL
Sbjct: 234 LGLPIAGDPLYPNVIDVAVGDFSTPLKLLAQCLEFTDPLAGVRLRFTSERTL 285


>tr|O07166|O07166_MYCTU Tax_Id=1773 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium tuberculosis]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|C6DL37|C6DL37_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium tuberculosis]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|C1AH74|C1AH74_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium bovis]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|A5WSL5|A5WSL5_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium tuberculosis]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|A5U7X4|A5U7X4_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium tuberculosis]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|A1KNV2|A1KNV2_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium bovis]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D6G390|D6G390_MYCTU Tax_Id=478435 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis KZN
           605]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D6FRK2|D6FRK2_MYCTU Tax_Id=611304 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis K85]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D6FLK7|D6FLK7_MYCTU Tax_Id=611303 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis
           CPHL_A]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D6F9V0|D6F9V0_MYCTU Tax_Id=611302 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T46]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D5ZLH9|D5ZLH9_MYCTU Tax_Id=537210 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T17]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D5Z8E5|D5Z8E5_MYCTU Tax_Id=537209 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis GM
           1503]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D5YWQ2|D5YWQ2_MYCTU Tax_Id=515616 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis
           02_1987]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D5XYX2|D5XYX2_MYCTU Tax_Id=515617 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T92]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|A4KLJ4|A4KLJ4_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|A2VP94|A2VP94_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium tuberculosis C]
          Length = 305

 Score =  380 bits (977), Expect = e-104
 Identities = 196/277 (70%), Positives = 223/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|A0QKH9|A0QKH9_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium avium]
          Length = 287

 Score =  379 bits (972), Expect = e-103
 Identities = 195/279 (69%), Positives = 224/279 (80%), Gaps = 3/279 (1%)

Query: 15  PGHEGIGPARLKVQGGRLVDELERRFGAGW--KVRAGEVFSRDGTVLDESTVLPPGSHVY 72
           P  +G+GPAR++++GG ++ EL  RFGA    KV A EV + DG V+DE+TVLP G+ VY
Sbjct: 4   PVRDGLGPARVRLRGGPVLAELTARFGAAARAKVLAAEVVTADGAVVDEATVLPAGASVY 63

Query: 73  LYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELA 132
           LYR+LPDEV VPFD+PVL+RDDDIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+
Sbjct: 64  LYRELPDEVVVPFDLPVLHRDDDIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELS 123

Query: 133 PAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVK 192
           PAHRLDRLTAGVLLFT RRE+RGAYQT+F+RG V KTYLA A   P +  P  L  RIVK
Sbjct: 124 PAHRLDRLTAGVLLFTARREVRGAYQTLFSRGLVDKTYLARAAVDPALVFPRVLAGRIVK 183

Query: 193 HRGRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPT 251
           HRGR+QA  EPG PNA T VE +  DGLYRL PRTGRTHQLR+ MAS+G+PI GDP YP 
Sbjct: 184 HRGRMQAVCEPGPPNALTEVELLSPDGLYRLRPRTGRTHQLRLQMASLGIPIIGDPLYPN 243

Query: 252 VIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           +IDV   DFS PLQLLA+R+ FDDP +GARR FVSRRTL
Sbjct: 244 MIDVPADDFSTPLQLLAQRIEFDDPRTGARRVFVSRRTL 282


>tr|Q73UE6|Q73UE6_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium paratuberculosis]
          Length = 290

 Score =  378 bits (971), Expect = e-103
 Identities = 194/279 (69%), Positives = 224/279 (80%), Gaps = 3/279 (1%)

Query: 15  PGHEGIGPARLKVQGGRLVDELERRFGAGW--KVRAGEVFSRDGTVLDESTVLPPGSHVY 72
           P  +G+GPAR++++GG ++ EL  RFGA    KV A EV + DG V+DE+TVLP G+ VY
Sbjct: 7   PVRDGLGPARVRLRGGPVLAELTARFGAAARAKVLAAEVVTADGAVVDEATVLPAGASVY 66

Query: 73  LYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELA 132
           LYR+LPDEV VPFD+PVL+RDDDIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+
Sbjct: 67  LYRELPDEVVVPFDLPVLHRDDDIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELS 126

Query: 133 PAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVK 192
           PAHRLDRLTAGVLLFT RRE+RGAYQT+F+RG V KTYLA A   P +  P  L  RIVK
Sbjct: 127 PAHRLDRLTAGVLLFTARREVRGAYQTLFSRGLVDKTYLARAAVDPALVFPRVLAGRIVK 186

Query: 193 HRGRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPT 251
           HRGR+QA  EPG PNA T VE +  DGLYRL PRTGRTHQLR+ MAS+G+PI GDP YP 
Sbjct: 187 HRGRMQAVCEPGPPNALTEVELLSPDGLYRLRPRTGRTHQLRLQMASLGIPIIGDPLYPN 246

Query: 252 VIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           +IDV   DFS PLQLLA+R+ FDDP +GARR FV+RRTL
Sbjct: 247 IIDVPADDFSTPLQLLAQRIEFDDPRTGARRVFVNRRTL 285


>tr|Q1BCM1|Q1BCM1_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium sp.]
          Length = 287

 Score =  378 bits (970), Expect = e-103
 Identities = 190/278 (68%), Positives = 221/278 (79%), Gaps = 2/278 (0%)

Query: 15  PGHEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVY 72
           P  +G+GPAR++++GG ++ EL  RFG     KV  G V   DGTV+   TVLPPG+HVY
Sbjct: 10  PVRDGLGPARVRLRGGAVLVELADRFGEAVAAKVFDGGVVCADGTVVRPGTVLPPGTHVY 69

Query: 73  LYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELA 132
           LYRDLP EV VPF +PVLYRDD+IVVVDKPHFLATMPRG HV +TA+VRLRR LDLPEL+
Sbjct: 70  LYRDLPVEVPVPFAMPVLYRDDNIVVVDKPHFLATMPRGRHVAETAVVRLRRALDLPELS 129

Query: 133 PAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVK 192
           PAHRLDRLTAGVLLFT RRE+RGAYQTMF+ G V K YLA + G   + LP  +RSRI+K
Sbjct: 130 PAHRLDRLTAGVLLFTTRREIRGAYQTMFSDGAVAKVYLARSAGHAAVDLPTVVRSRIIK 189

Query: 193 HRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTV 252
            RGRLQAFE PGEPNAET VE +GD +YRLTPRTGRTHQLRVHM+S+GLP+ GDP YP V
Sbjct: 190 ERGRLQAFEAPGEPNAETLVEHLGDDVYRLTPRTGRTHQLRVHMSSLGLPLLGDPLYPDV 249

Query: 253 IDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           IDVAP DF+ PLQLLA  + FDDP++G    FV+ RTL
Sbjct: 250 IDVAPDDFADPLQLLAHSIEFDDPLTGRPHRFVTGRTL 287


>tr|A3PW03|A3PW03_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium sp.]
          Length = 287

 Score =  378 bits (970), Expect = e-103
 Identities = 189/278 (67%), Positives = 222/278 (79%), Gaps = 2/278 (0%)

Query: 15  PGHEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVY 72
           P  +G+GPAR++++GG ++ EL  RFG     KV  G V + DG+ +  +TVLPPG+HVY
Sbjct: 10  PVRDGLGPARVRLRGGAVLVELADRFGEAVAAKVFDGGVLTADGSAVTPATVLPPGTHVY 69

Query: 73  LYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELA 132
           LYRDLP EV VPF +PVL+RDD+IVVVDKPHFLATMPRG HV +TA+VRLRR LDLPEL+
Sbjct: 70  LYRDLPVEVPVPFAMPVLHRDDNIVVVDKPHFLATMPRGRHVAETAVVRLRRALDLPELS 129

Query: 133 PAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVK 192
           PAHRLDRLTAGVLLFT RRE+RGAYQTMF+ G V K YLA + G   + LP  +RSRI+K
Sbjct: 130 PAHRLDRLTAGVLLFTTRREIRGAYQTMFSDGAVAKVYLARSAGHATVDLPTVVRSRIIK 189

Query: 193 HRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTV 252
            RGRLQAFE PGEPNAET VE +GD +YRLTPRTGRTHQLRVHMAS+GLP+ GDP YP V
Sbjct: 190 ERGRLQAFEAPGEPNAETLVEHLGDDVYRLTPRTGRTHQLRVHMASLGLPLLGDPLYPDV 249

Query: 253 IDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           IDVAP DFS PLQLLA  + FDDP++G    FV+ RTL
Sbjct: 250 IDVAPDDFSTPLQLLANSIEFDDPLTGRPHRFVTGRTL 287


>tr|A1UCC2|A1UCC2_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium sp.]
          Length = 287

 Score =  378 bits (970), Expect = e-103
 Identities = 190/278 (68%), Positives = 221/278 (79%), Gaps = 2/278 (0%)

Query: 15  PGHEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVY 72
           P  +G+GPAR++++GG ++ EL  RFG     KV  G V   DGTV+   TVLPPG+HVY
Sbjct: 10  PVRDGLGPARVRLRGGAVLVELADRFGEAVAAKVFDGGVVCADGTVVRPGTVLPPGTHVY 69

Query: 73  LYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELA 132
           LYRDLP EV VPF +PVLYRDD+IVVVDKPHFLATMPRG HV +TA+VRLRR LDLPEL+
Sbjct: 70  LYRDLPVEVPVPFAMPVLYRDDNIVVVDKPHFLATMPRGRHVAETAVVRLRRALDLPELS 129

Query: 133 PAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVK 192
           PAHRLDRLTAGVLLFT RRE+RGAYQTMF+ G V K YLA + G   + LP  +RSRI+K
Sbjct: 130 PAHRLDRLTAGVLLFTTRREIRGAYQTMFSDGAVAKVYLARSAGHAAVDLPTVVRSRIIK 189

Query: 193 HRGRLQAFEEPGEPNAETYVEAVGDGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTV 252
            RGRLQAFE PGEPNAET VE +GD +YRLTPRTGRTHQLRVHM+S+GLP+ GDP YP V
Sbjct: 190 ERGRLQAFEAPGEPNAETLVEHLGDDVYRLTPRTGRTHQLRVHMSSLGLPLLGDPLYPDV 249

Query: 253 IDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           IDVAP DF+ PLQLLA  + FDDP++G    FV+ RTL
Sbjct: 250 IDVAPDDFADPLQLLAHSIEFDDPLTGRPHRFVTGRTL 287


>tr|Q7D5R2|Q7D5R2_MYCTU Tax_Id=1773 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium tuberculosis]
          Length = 305

 Score =  377 bits (968), Expect = e-103
 Identities = 195/277 (70%), Positives = 222/277 (80%), Gaps = 3/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 193 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 252

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA   FS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 SVAAHYFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 289


>tr|D5YJR8|D5YJR8_MYCTU Tax_Id=520140 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis
           EAS054]
          Length = 304

 Score =  374 bits (961), Expect = e-102
 Identities = 195/277 (70%), Positives = 222/277 (80%), Gaps = 4/277 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVV DKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVV-DKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 131

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 132 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 191

Query: 195 GRLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVI 253
           G LQA  EPG PNAET VE +  DGLYRLTP TGRTHQLRVHMA++G+PI GDP YP VI
Sbjct: 192 GHLQAVCEPGVPNAETLVERIARDGLYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNVI 251

Query: 254 DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 252 SVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 288


>tr|B2HDX3|B2HDX3_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium marinum]
          Length = 288

 Score =  363 bits (933), Expect = 1e-98
 Identities = 188/279 (67%), Positives = 220/279 (78%), Gaps = 6/279 (2%)

Query: 18  EGIGPARLKVQGGRLVDELERRFGAGW--KVRAGEVFSRDGTVLDESTVLPPGSHVYLYR 75
           + +GPAR+++ GG ++ EL  RFGA    KV AGEV    G ++D +TV  PGS+VYLYR
Sbjct: 10  DALGPARVRLHGGPVLAELSERFGAAARAKVLAGEVVDAAGAIVDTATVAEPGSYVYLYR 69

Query: 76  DLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPAH 135
           DLP+EV VPF++PVL++D+DIVV DKPHFLATMPRG HV QTALVRLR EL LPEL+PAH
Sbjct: 70  DLPEEVPVPFEMPVLHQDEDIVVADKPHFLATMPRGRHVAQTALVRLRCELGLPELSPAH 129

Query: 136 RLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHRG 195
           RLDRLTAGVLLFT RRELRG YQT+FARG V+KTYLA A     +A P  +RSRIVK RG
Sbjct: 130 RLDRLTAGVLLFTTRRELRGRYQTLFARGAVRKTYLARAAVDADLAFPRVIRSRIVKRRG 189

Query: 196 RLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVID 254
            LQA  EPGEPNAET VE +  +GLYRLTPRTGRTHQLRVHMAS+GLPI GDP YP VI 
Sbjct: 190 HLQAVCEPGEPNAETLVELISPEGLYRLTPRTGRTHQLRVHMASLGLPIFGDPLYPNVIP 249

Query: 255 VAP---GDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            +P    DFS PL LLA+R+ F+DP+SG+RREFVS R +
Sbjct: 250 ESPHDLSDFSSPLSLLAQRIEFEDPLSGSRREFVSPREI 288


>tr|A0PRL6|A0PRL6_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium ulcerans]
          Length = 288

 Score =  363 bits (931), Expect = 2e-98
 Identities = 188/279 (67%), Positives = 219/279 (78%), Gaps = 6/279 (2%)

Query: 18  EGIGPARLKVQGGRLVDELERRFGAGW--KVRAGEVFSRDGTVLDESTVLPPGSHVYLYR 75
           + +GPAR+++ GG ++ EL  RFGA    KV AGEV    G ++  +TV  PGSHVYLYR
Sbjct: 10  DALGPARVRLHGGPVLAELSERFGAAARAKVLAGEVVDAAGAIVGTATVAGPGSHVYLYR 69

Query: 76  DLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPAH 135
           DLP+EV VPF++PVL++D+DIVV DKPHFLATMPRG HV QTALVRLR EL LPEL+PAH
Sbjct: 70  DLPEEVPVPFEMPVLHQDEDIVVADKPHFLATMPRGRHVAQTALVRLRCELGLPELSPAH 129

Query: 136 RLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHRG 195
           RLDRLTAGVLLFT RRELRG YQT+FARG V+KTYLA A     +A P  +RSRIVK RG
Sbjct: 130 RLDRLTAGVLLFTTRRELRGRYQTLFARGAVRKTYLARAAVDADLAFPRVIRSRIVKRRG 189

Query: 196 RLQAFEEPGEPNAETYVEAVG-DGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVID 254
            LQA  EPGEPNAET VE +  +GLYRLTPRTGRTHQLRVHMAS+GLPI GDP YP VI 
Sbjct: 190 HLQAVCEPGEPNAETLVELISPEGLYRLTPRTGRTHQLRVHMASLGLPIFGDPLYPNVIP 249

Query: 255 VAP---GDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
            +P    DFS PL LLA+R+ F+DP+SG+RREFVS R +
Sbjct: 250 ESPHDLSDFSSPLSLLAQRIEFEDPLSGSRREFVSPREI 288


>tr|D5Y8N6|D5Y8N6_MYCTU Tax_Id=520141 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T85]
          Length = 306

 Score =  326 bits (836), Expect = 2e-87
 Identities = 174/278 (62%), Positives = 203/278 (73%), Gaps = 4/278 (1%)

Query: 17  HEGIGPARLKVQGGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLY 74
           H+ +GP R+++ GG ++ EL  RFG  A  KV AGEV   DG V+D  TVLPPGS V+LY
Sbjct: 13  HDVLGPVRVRLLGGSVLAELTARFGVAARAKVLAGEVVDDDGAVVDSGTVLPPGSVVHLY 72

Query: 75  RDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPA 134
           RDLPDEV VPFD+PVL++D DIVVVDKPHFLATMPRG HV QTALVRLRREL LPEL+PA
Sbjct: 73  RDLPDEVPVPFDVPVLHQDADIVVVDKPHFLATMPRGRHVAQTALVRLRRELGLPELSPA 132

Query: 135 HRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHR 194
           HRLDRLTAGVLLFT RRE+RG+YQTMFARG V+KTYLA A   P +ALP  +RSRIVK R
Sbjct: 133 HRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRR 192

Query: 195 GRLQAFEEPGEPNAETY--VEAVGDGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTV 252
           G LQA  EPG PNA      ++    +   T   G          ++G+PI GDP YP V
Sbjct: 193 GHLQAVCEPGVPNAGDAGGADSARRSVSADTDHRGAPTSCECTWRALGIPIMGDPLYPNV 252

Query: 253 IDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           I VA  DFS PLQLLA+R+ FDDP++G+ REF S RTL
Sbjct: 253 ISVAAHDFSTPLQLLAQRIEFDDPLTGSHREFASTRTL 290


>tr|B1MFY3|B1MFY3_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Mycobacterium abscessus]
          Length = 277

 Score =  297 bits (760), Expect = 1e-78
 Identities = 162/269 (60%), Positives = 193/269 (71%), Gaps = 6/269 (2%)

Query: 29  GGRLVDELERRFG--AGWKVRAGEVFSRDGTVLDESTVLPPGSHVYLYRDLPDEVDVPFD 86
           GGR+VDEL  RFG  A  +V  GEV    G  +   T LP G+ VY YR+  +E+ VPF 
Sbjct: 8   GGRVVDELVARFGPAAVDQVDRGEVVDSAGMRVTAGTRLPAGAVVYTYREPAEEISVPFA 67

Query: 87  IPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDLPELAPAHRLDRLTAGVLL 146
           I VL+ D++++VVDKPHFLATMPRG HVT+TALVRLR+ LDLPELAPAHRLDRLTAGVLL
Sbjct: 68  IDVLHWDENVLVVDKPHFLATMPRGRHVTETALVRLRKMLDLPELAPAHRLDRLTAGVLL 127

Query: 147 FTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRSRIVKHRGRLQAFEEPGEP 206
           FTVRR+ R AY ++FA+  V K Y A A   P ++LP T+RSRIVK R  LQA EEPG  
Sbjct: 128 FTVRRDARAAYHSLFAQRQVVKIYEALAPVKPGLSLPLTVRSRIVKRRSILQAVEEPGPA 187

Query: 207 NAETYVEAV----GDGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPTVIDVAPGDFSR 262
           NAET VE V      G YRLTP TG+THQLRVHM S+G+PI  DP YP V++V P DF+R
Sbjct: 188 NAETRVELVDRHHAVGRYRLTPSTGQTHQLRVHMNSMGVPILNDPLYPDVVEVPPDDFTR 247

Query: 263 PLQLLAKRLMFDDPVSGARREFVSRRTLG 291
           PLQLLA+ L F DP++G    + S R LG
Sbjct: 248 PLQLLARTLAFRDPLNGKDVRYESGRALG 276


>tr|D5PY40|D5PY40_COREQ Tax_Id=525370 SubName: Full=RNA
           pseudouridine synthase; EC=5.4.99.-;[Rhodococcus equi
           ATCC 33707]
          Length = 297

 Score =  292 bits (747), Expect = 4e-77
 Identities = 152/250 (60%), Positives = 181/250 (72%), Gaps = 4/250 (1%)

Query: 45  KVRAGEVFSRDGTVLDESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHF 104
           KV AGEV    GT +D  T   P + +YLYRD P E  VPF++ VL+RD D++VVDKPHF
Sbjct: 46  KVDAGEVVDEHGTPIDAVTAYRPRAFLYLYRDPPAEKRVPFEVDVLHRDQDLLVVDKPHF 105

Query: 105 LATMPRGGHVTQTALVRLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARG 164
           LA+ PRG +V ++ALVRLRRELDLPEL PAHRLDR+TAGVLLFTVRRE R AYQ++F   
Sbjct: 106 LASTPRGAYVVESALVRLRRELDLPELTPAHRLDRITAGVLLFTVRREARRAYQSLFDER 165

Query: 165 DVQKTYLAHAEGVPKIALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLY 220
              K Y A A   P + LP T+RSRI+K RG LQA E  GEPNAE+ +E +    G G Y
Sbjct: 166 RATKVYEALARHDPSLHLPVTVRSRIIKERGVLQAREVDGEPNAESRIELLDVRDGVGHY 225

Query: 221 RLTPRTGRTHQLRVHMASIGLPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGA 280
           RL PRTG+THQLR+HM S+G+PI GD FYP   DVA  D+S PL+LLA+ L FDDP +G 
Sbjct: 226 RLLPRTGKTHQLRLHMCSLGVPIIGDNFYPRFYDVASDDYSDPLRLLARSLEFDDPYTGV 285

Query: 281 RREFVSRRTL 290
           RR F SRRTL
Sbjct: 286 RRRFESRRTL 295


>tr|D6K8J5|D6K8J5_9ACTO Tax_Id=645465 SubName: Full=RNA
           pseudouridylate synthase;[Streptomyces sp. e14]
          Length = 324

 Score =  288 bits (737), Expect = 6e-76
 Identities = 170/303 (56%), Positives = 198/303 (65%), Gaps = 15/303 (4%)

Query: 2   RRPAASPKGLPERPGHEGIGPARLKVQGG-RLVDE--LERRFGAGWKV-----RAGEVFS 53
           RR    P  LP+R G + +   RL  +G    V E  +ER  GA   V      AG + +
Sbjct: 10  RRTRVPPAPLPQRHGVDPVR-VRLPAEGAWATVREHLVERLSGAAPGVVEEMFAAGRIVA 68

Query: 54  RDGTVLDESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGH 113
            DG  +       PG  V+ +R+LP E  VPF + V++RD+ IVVVDKPHFLAT PRG H
Sbjct: 69  ADGRAVPPDAPYEPGMFVWFHRELPAETPVPFPLVVVHRDEHIVVVDKPHFLATTPRGSH 128

Query: 114 VTQTALVRLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAH 173
           VT+TAL RLRRELDLP L  AHRLDRLTAG++LFTVR E RGAYQT+F    V+K Y A 
Sbjct: 129 VTETALARLRRELDLPTLGAAHRLDRLTAGLVLFTVRPEERGAYQTLFRDRRVRKEYEAV 188

Query: 174 AEGVPKIALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAV-----GDGLYRLTPRTGR 228
           A   P +ALP T+RSRIVK RG L A E PGEPNA T VE V     G   YRLTPRTG+
Sbjct: 189 APYDPDLALPRTVRSRIVKERGVLTAEEVPGEPNAVTDVELVGRRPGGPARYRLTPRTGQ 248

Query: 229 THQLRVHMASIGLPITGDPFYPTVI-DVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSR 287
           THQLRVHM ++G+PI GDP YP V  D  PGDFSRPLQLLA+ L F DPV+GA   F S 
Sbjct: 249 THQLRVHMNALGVPILGDPLYPAVTPDGPPGDFSRPLQLLARALEFTDPVTGAEHRFRSG 308

Query: 288 RTL 290
           RTL
Sbjct: 309 RTL 311


>tr|Q828G2|Q828G2_STRAW Tax_Id=33903 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Streptomyces avermitilis]
          Length = 321

 Score =  283 bits (725), Expect = 1e-74
 Identities = 162/303 (53%), Positives = 196/303 (64%), Gaps = 17/303 (5%)

Query: 2   RRPAASPKGLPERPGHEGIGPARLKV-QGGR---LVDELERRFGAGWKV-----RAGEVF 52
           R+P   P  LP+R   EG+ P R+K+ QGG    + D L  R  AG  V      AG + 
Sbjct: 11  RKPRIPPSPLPQR---EGVDPVRVKLPQGGAWGTVRDHLVARLAAGDGVVDGMLDAGLIV 67

Query: 53  SRDGTVLDESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGG 112
             DG  ++  T   PG  V+ +R+LPDE  VPF + V+YRD+ IVV DKPHFLAT PRG 
Sbjct: 68  GADGRPVERDTAYVPGMFVWFHRELPDEERVPFALDVVYRDEHIVVADKPHFLATTPRGS 127

Query: 113 HVTQTALVRLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLA 172
           HV +T L RLRR+L +PEL  AHRLDRLTAG++LFTVR   RGAYQ++F    V K Y A
Sbjct: 128 HVAETVLARLRRDLGIPELGAAHRLDRLTAGLVLFTVRPGERGAYQSLFRDKLVHKEYEA 187

Query: 173 HAEGVPKIALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLYRLTPRTGR 228
            A   P++ALP T+RSRI+K RG L A E  GEPNA + +E      G G YRL PRTG+
Sbjct: 188 VATYDPEVALPRTVRSRILKERGLLAAREVAGEPNAVSRIELTEHRDGRGRYRLLPRTGQ 247

Query: 229 THQLRVHMASIGLPITGDPFYPTVIDVAP-GDFSRPLQLLAKRLMFDDPVSGARREFVSR 287
           THQLRVHM ++GLPI GDP YP V D  P GDF RPLQLLA+ L F DPV+G    F+S 
Sbjct: 248 THQLRVHMNALGLPILGDPLYPVVTDPGPAGDFRRPLQLLARVLEFTDPVTGHEHRFLSE 307

Query: 288 RTL 290
           R L
Sbjct: 308 RVL 310


>tr|Q0SIE7|Q0SIE7_RHOSR Tax_Id=101510 SubName: Full=Possible
           pseudouridylate synthase;[Rhodococcus sp.]
          Length = 297

 Score =  283 bits (724), Expect = 2e-74
 Identities = 152/290 (52%), Positives = 188/290 (64%), Gaps = 13/290 (4%)

Query: 15  PGHEGIGPARLKVQGG-------RLVDELERRFGAGWK--VRAGEVFSRDGTVLDESTVL 65
           P   G+GP R+++  G         + E      A W   +  GEV    G V+D  T  
Sbjct: 7   PVRNGLGPDRIRMPAGVGTKTVAEFLVETYPDERAHWLSLIDGGEVVDEHGRVVDRGTRY 66

Query: 66  PPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRE 125
            P   VY YRD   E+ VPF+I +L+RDD +VV+DKPHFLAT+PRG H+T+TA+VRLRR 
Sbjct: 67  APTRFVYFYRDPAPEIPVPFEIDILHRDDHLVVIDKPHFLATIPRGAHITETAVVRLRRA 126

Query: 126 LDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPAT 185
           LDLP+L PAHRLDR+TAGVL+F +RRE R  YQ +F    V K Y A A   P +A P T
Sbjct: 127 LDLPDLTPAHRLDRMTAGVLVFLIRREDRRPYQELFVSQQVTKEYEAVAGHDPALAFPRT 186

Query: 186 LRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLYRLTPRTGRTHQLRVHMASIGL 241
           +RSRIVK  G + A EEPGEPN+ET V+ +    G   YRL P+TGRTHQLR+HM+S+GL
Sbjct: 187 IRSRIVKEHGIMTATEEPGEPNSETVVDLLDTRDGRARYRLLPKTGRTHQLRLHMSSLGL 246

Query: 242 PITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTLG 291
           PI GD +YP      PGDFS PL+LLA+ + F DP SG  R F SRRTLG
Sbjct: 247 PIEGDNYYPDFRRSEPGDFSTPLRLLARAIEFTDPRSGEVRRFESRRTLG 296


>tr|C8X7A1|C8X7A1_NAKMY Tax_Id=479431 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Nakamurella multipartita]
          Length = 299

 Score =  282 bits (722), Expect = 3e-74
 Identities = 154/288 (53%), Positives = 194/288 (67%), Gaps = 12/288 (4%)

Query: 15  PGHEGIGPARLKVQ---GGRLVDELERRFGAGW-----KVRAGEVFSRDGTVLDESTVLP 66
           P  +G+ P+R+++     G +V+ L  RF A       KV AGEV   +G V+D ST L 
Sbjct: 7   PVRDGLNPSRIRLPDEGSGTVVEYLLERFAADATRVREKVDAGEVVDGEGRVVDPSTPLT 66

Query: 67  PGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRREL 126
               V+LYRD   E  VPF+I +L+RD D++VVDKPHFLATMPRG H+ ++ALVRLRREL
Sbjct: 67  SSQWVFLYRDPAPEPRVPFEIEILHRDSDLLVVDKPHFLATMPRGLHIVESALVRLRREL 126

Query: 127 DLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATL 186
           DLPEL+P HRLDR+TAGVL+F++R   RGAYQT+FA+  V K Y A A     + LP T+
Sbjct: 127 DLPELSPIHRLDRVTAGVLVFSLRPANRGAYQTLFAQRKVTKYYEAVAGHRADLTLPTTV 186

Query: 187 RSRIVKHRGRLQAFEEPGEPNAETYVEAVG----DGLYRLTPRTGRTHQLRVHMASIGLP 242
            SRIVK RG   A + PGEPNA T VE +       LY L P TG+ HQLR+HM S+G+P
Sbjct: 187 ESRIVKFRGTPTAQQVPGEPNARTVVERLAARGERALYGLHPHTGKVHQLRLHMTSLGVP 246

Query: 243 ITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           I GD FYPT++D    D+S PLQLLA+ + F DP +G RR F SRRTL
Sbjct: 247 IVGDNFYPTLLDTPRDDYSDPLQLLARSIEFPDPFTGRRRRFESRRTL 294


>tr|A4FF01|A4FF01_SACEN Tax_Id=405948 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Saccharopolyspora erythraea]
          Length = 312

 Score =  282 bits (722), Expect = 3e-74
 Identities = 168/303 (55%), Positives = 198/303 (65%), Gaps = 17/303 (5%)

Query: 1   MRRPAASPKGLPERPGHEGIGPARLKVQGG--RLVDELERRFGAGWKVRAGEVFSRDGTV 58
           MRR   SP  LP+R G + +   RL  +G    + D L  R   G + R   +F R+  V
Sbjct: 1   MRRKLRSP--LPQRDGLDAVR-LRLPSEGPWETVRDHLVDRLPIGAE-RVDRMF-REQAV 55

Query: 59  LD------ESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGG 112
           +D            PGS V+ +RDLPDEV VPF+I V++RDDD++VVDKPHFLAT PRG 
Sbjct: 56  VDLHGPVAADAPFVPGSFVWFHRDLPDEVPVPFEIGVVHRDDDLLVVDKPHFLATTPRGR 115

Query: 113 HVTQTALVRLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLA 172
           HV QTALVRLRREL +P+L+PAHRLDR TAG+++F +R ELR +YQ MF    V K Y A
Sbjct: 116 HVAQTALVRLRRELSIPDLSPAHRLDRTTAGLVMFVIRPELRKSYQEMFQNRLVHKEYEA 175

Query: 173 HAEGVPKIALPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLYRLTPRTGR 228
            A   P + LP T+RSRIVK RG L A E PG PNAET VE +    G G YRL P+TGR
Sbjct: 176 VAPFDPGLELPRTVRSRIVKERGVLAAQEVPGPPNAETLVELLEHRDGLGRYRLLPKTGR 235

Query: 229 THQLRVHMASIGLPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRR 288
           THQLRVH+ SIG+PI GD  YP V D AP DF RPLQLLAK L F DPVSG  R F S  
Sbjct: 236 THQLRVHLNSIGIPILGDDTYPVVNDPAPDDFGRPLQLLAKALEFTDPVSGLHRRFESGL 295

Query: 289 TLG 291
            LG
Sbjct: 296 ALG 298


>tr|C1ASQ9|C1ASQ9_RHOOB Tax_Id=632772 SubName: Full=Putative
           pseudouridine synthase;[Rhodococcus opacus]
          Length = 297

 Score =  282 bits (721), Expect = 4e-74
 Identities = 156/293 (53%), Positives = 191/293 (65%), Gaps = 19/293 (6%)

Query: 15  PGHEGIGPARLKVQGG---RLVDEL-------ERRFGAGWK--VRAGEVFSRDGTVLDES 62
           P   G+GP R+++  G   R V E        ER   A W   + AG+V    G V+D  
Sbjct: 7   PVRGGLGPDRIRMPAGLGARTVAEFLVDTYPDER---AHWLSLIDAGDVVDEHGRVVDRG 63

Query: 63  TVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRL 122
           T   P   VY YRD   E+ VPF+I VL+RDD +VV+DKPHFLAT+PRG H+T+TA+VRL
Sbjct: 64  TRYAPTRFVYFYRDPAPEIPVPFEIDVLHRDDHLVVIDKPHFLATIPRGAHITETAVVRL 123

Query: 123 RRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIAL 182
           RR LDLP+L PAHRLDR+TAGVL+F +R E R AYQ +F    V K Y A A   P +  
Sbjct: 124 RRALDLPDLTPAHRLDRMTAGVLVFLIRPEDRRAYQELFVSQQVTKEYEAVAGHDPALEF 183

Query: 183 PATLRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLYRLTPRTGRTHQLRVHMAS 238
           P T+RSRIVK  G + A EEPGEPN+ET V+ +    G   YRL P+TGRTHQLR+HM+S
Sbjct: 184 PRTIRSRIVKEHGIMTATEEPGEPNSETVVDLIESRDGRARYRLLPKTGRTHQLRLHMSS 243

Query: 239 IGLPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTLG 291
           +GLPI GD +YP      PGDFS PL+LLA+ + F DP SG  R F SRRTLG
Sbjct: 244 LGLPIEGDNYYPDFRRSEPGDFSTPLRLLARAIEFTDPRSGRVRRFESRRTLG 296


>tr|D5ZSA5|D5ZSA5_9ACTO Tax_Id=566461 SubName: Full=Ribosomal
           pseudouridine synthase;[Streptomyces ghanaensis ATCC
           14672]
          Length = 319

 Score =  279 bits (714), Expect = 3e-73
 Identities = 162/304 (53%), Positives = 193/304 (63%), Gaps = 18/304 (5%)

Query: 2   RRPAASPKGLPERPGHEGIGPARLKVQGG----RLVDELERRFGAGWKV-----RAGEVF 52
           RR  A P  LP+R   +G+ P R+++  G     + D L +R  AG  V      AG + 
Sbjct: 6   RRRPAPPPPLPQR---DGVDPVRVRLPAGGSWATVRDHLVQRLSAGPGVVDGMFAAGLIV 62

Query: 53  SRDGTVLDESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGG 112
             DG  +       PG  ++ +R+LP EV VPF + V++RD+ IVVVDKPHFLAT PRG 
Sbjct: 63  GADGRAVPADAPYEPGLFLWFHRELPAEVPVPFPLEVVHRDEHIVVVDKPHFLATTPRGS 122

Query: 113 HVTQTALVRLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLA 172
           HV QTAL RLRREL +PEL  AHRLDRLTAG++LFTVR   RGAYQT+F    V K Y A
Sbjct: 123 HVAQTALARLRRELGIPELGAAHRLDRLTAGLVLFTVRPGERGAYQTLFRDRRVHKEYEA 182

Query: 173 HAEGVPKIALPATLRSRIVKHRGRLQAFEEPGEPNAETYVE-----AVGDGLYRLTPRTG 227
            A   P + LP T+RSRIVK RG L A E  GEPNA T VE     A G G YRL P TG
Sbjct: 183 VAPYDPGLDLPRTVRSRIVKERGELAAREVEGEPNALTLVELTEHRADGPGRYRLVPGTG 242

Query: 228 RTHQLRVHMASIGLPITGDPFYPTVIDVAP-GDFSRPLQLLAKRLMFDDPVSGARREFVS 286
           +THQLRVHM+++G+PI GDP YP V    P GDF RPLQLLA+ L F DPV+G    F S
Sbjct: 243 QTHQLRVHMSALGVPILGDPLYPEVTAPVPAGDFRRPLQLLARVLEFTDPVTGVEHRFTS 302

Query: 287 RRTL 290
           RR L
Sbjct: 303 RREL 306


>tr|B4VA90|B4VA90_9ACTO Tax_Id=465541 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Streptomyces sp. Mg1]
          Length = 324

 Score =  279 bits (713), Expect = 3e-73
 Identities = 167/308 (54%), Positives = 194/308 (62%), Gaps = 21/308 (6%)

Query: 1   MRRPAASPKGLPERPGHEGIGPARLKVQ----------GGRLVDELERRFGAGWK---VR 47
           MRR    P  LP+  G   I P RL++           G  L D      GA      +R
Sbjct: 1   MRRRPLPPAPLPQVAG---IDPVRLRLPSDPDGLWPDLGAYLTDRYAGTRGAETMPALLR 57

Query: 48  AGEVFSRDGTVLDESTVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLAT 107
           AG V    G VL       PGS+++ +RD+P E  VPF I V+YRD+ ++V DKPHFLAT
Sbjct: 58  AGRVLGMGGRVLRPEDPYEPGSYLWFHRDMPPEPAVPFPIGVVYRDEHLLVADKPHFLAT 117

Query: 108 MPRGGHVTQTALVRLRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQ 167
            PRG HVTQTAL RLR ELDLP L+PAHRLDRLTAG+++F++R E RGAYQ +F    V 
Sbjct: 118 TPRGSHVTQTALARLRDELDLPALSPAHRLDRLTAGLVMFSIRPEDRGAYQLLFQNRRVG 177

Query: 168 KTYLAHAEGVPKIALPATLRSRIVKHRGRLQAFEEP-GEPNAETYV---EAVGD-GLYRL 222
           K Y A A   P +ALP TLRSRI K RG + A E P GEPNAET V   E+ GD G YRL
Sbjct: 178 KQYEALAPLDPALALPRTLRSRIEKTRGVIAAAEIPGGEPNAETLVELAESKGDTGRYRL 237

Query: 223 TPRTGRTHQLRVHMASIGLPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARR 282
           TP TGRTHQLRVHM S+GLPI GDP YP V D  P D+ RPLQLLA+ L F DPV+G   
Sbjct: 238 TPHTGRTHQLRVHMNSLGLPILGDPVYPKVTDPDPLDYRRPLQLLARVLEFTDPVTGIAH 297

Query: 283 EFVSRRTL 290
              SRRTL
Sbjct: 298 RLESRRTL 305


>tr|D1BBJ7|D1BBJ7_SANKS Tax_Id=446469 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Sanguibacter keddieii]
          Length = 303

 Score =  275 bits (704), Expect = 4e-72
 Identities = 154/294 (52%), Positives = 190/294 (64%), Gaps = 20/294 (6%)

Query: 18  EGIGPARLKVQGGR----LVDELERRFGAGW-----KVRAGEVFSRDGTVLDESTVLPPG 68
           +G+ P RL++  G     ++  L  RF         KV AGEV    G  L        G
Sbjct: 3   DGLNPVRLQLPHGAEAATVLAYLVARFPTDAERMREKVAAGEVVDEIGRSLGPDAPYVGG 62

Query: 69  SHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRELDL 128
           + VYLYRD   E  VPF+I VL+ DDD++V+DKPHFLA+ PRG +V ++A+VRLRR+L L
Sbjct: 63  TLVYLYRDAAPEPRVPFEIDVLHHDDDLLVIDKPHFLASTPRGAYVVESAVVRLRRDLGL 122

Query: 129 PELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPATLRS 188
           PE++PAHRLDR+TAGVL+ T RRE+RGAYQ +FA   + KTY A A   P++ LP T+RS
Sbjct: 123 PEISPAHRLDRITAGVLVLTTRREVRGAYQQLFASRTIHKTYEAVARVDPRLDLPRTVRS 182

Query: 189 RIVKHRGRLQAFEEPGEPNAETYVE------AVGD-----GLYRLTPRTGRTHQLRVHMA 237
           RIVK  G L A E PGEPNAE+ V         GD     G Y L P TG+THQLR+HMA
Sbjct: 183 RIVKEHGTLVAQEVPGEPNAESRVSLAEVAPGAGDGGEALGRYVLEPHTGKTHQLRLHMA 242

Query: 238 SIGLPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTLG 291
           S+GLPI  D FYP   DVAP D+S PLQLLA+ + F DP+SG  R F SRR LG
Sbjct: 243 SLGLPILNDNFYPRFYDVAPDDYSAPLQLLARSISFTDPLSGEPRTFTSRRALG 296


>tr|Q5Z1U7|Q5Z1U7_NOCFA Tax_Id=37329 SubName: Full=Putative RNA
           pseudouridylate synthase;[Nocardia farcinica]
          Length = 309

 Score =  275 bits (702), Expect = 6e-72
 Identities = 152/293 (51%), Positives = 195/293 (66%), Gaps = 15/293 (5%)

Query: 12  PERPGHEGIGPARLKV----QGGRLVDELERRFGA------GWKVRAGEVFSRDGTVLDE 61
           P  P   G+ PARL++    +   + D L  R            +RAG +   DG +  +
Sbjct: 7   PPLPKRHGLDPARLRLPEAGEWATIRDHLVHRLPRVAPERIDELLRAGAIVDLDGPIAPD 66

Query: 62  STVLPPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVR 121
           +  +P G+ V+ +RDLPDEV+VPFD+ V++RD+ ++VVDKPHFLAT+PRG H+ QTALVR
Sbjct: 67  APYVPGGA-VWFHRDLPDEVEVPFDLTVVHRDETVLVVDKPHFLATIPRGQHIRQTALVR 125

Query: 122 LRRELDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIA 181
           LR +L LP+L PAHRLDR+TAG++LF V    RGAYQTMF R  V+K Y A A   P++A
Sbjct: 126 LREQLGLPDLVPAHRLDRVTAGLILFVVDPARRGAYQTMFHRRTVRKQYEAIAPFDPELA 185

Query: 182 LPATLRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLYRLTPRTGRTHQLRVHMA 237
           LP  +RSRIVK +  L A E  GEPNAET VE +    G G YRLTP TGRTHQLR+HM 
Sbjct: 186 LPRVVRSRIVKEKHVLAAREVEGEPNAETLVELLEHRDGLGRYRLTPHTGRTHQLRLHMN 245

Query: 238 SIGLPITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           S+G+PI GD FYP + D    +F+RPLQLLA  L F DPV+G  R F + R+L
Sbjct: 246 SLGVPILGDDFYPVLTDKPVHEFTRPLQLLAAVLEFTDPVTGEPRRFETTRSL 298


>tr|C0ZNX4|C0ZNX4_RHOE4 Tax_Id=234621 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Rhodococcus erythropolis]
          Length = 323

 Score =  274 bits (701), Expect = 8e-72
 Identities = 149/289 (51%), Positives = 192/289 (66%), Gaps = 13/289 (4%)

Query: 15  PGHEGIGPARLKVQGGRL----VDELERRFGAGW-----KVRAGEVFSRDGTVLDESTVL 65
           P  +G+ P+R++     +    +D L  RF         KV AGEV    G  + E++  
Sbjct: 23  PVRDGLNPSRIRQPDDGMWATTLDYLLERFPQDAVRLREKVAAGEVVDEKGVAITETSGF 82

Query: 66  PPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRE 125
            P   VYLYRD P E  VPF+I +LYRD++I+VVDKPHFLA+ PRG ++ ++ALVRLRR+
Sbjct: 83  APRRFVYLYRDAPVEARVPFEIDILYRDENILVVDKPHFLASTPRGRYIAESALVRLRRD 142

Query: 126 LDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPAT 185
           LDLPEL+PAHRLDR+TAG+LLFTV +  R  YQTMFA   V K Y A A    +++ P  
Sbjct: 143 LDLPELSPAHRLDRVTAGLLLFTVHQAARRGYQTMFAERRVTKEYEAIARYDAQVSTPVV 202

Query: 186 LRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLYRLTPRTGRTHQLRVHMASIGL 241
           +RSRIVK RG L+A E  GEPN+E+ +E +    G   YRL P TG+THQLR+HM S+GL
Sbjct: 203 VRSRIVKERGVLKAAEIEGEPNSESRIELIETRDGFARYRLIPHTGKTHQLRLHMTSLGL 262

Query: 242 PITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           PI GD FYP   DVA  D+S PL+LL+K L F+DP +G  + F SRRTL
Sbjct: 263 PIHGDNFYPDFYDVAAEDYSNPLRLLSKVLEFEDPTTGRLQRFESRRTL 311


>tr|C3JED9|C3JED9_RHOER Tax_Id=596309 RecName: Full=Pseudouridine
           synthase; EC=5.4.99.-;[Rhodococcus erythropolis SK121]
          Length = 307

 Score =  274 bits (700), Expect = 1e-71
 Identities = 149/289 (51%), Positives = 193/289 (66%), Gaps = 13/289 (4%)

Query: 15  PGHEGIGPARLKVQGGRL----VDELERRFGAGW-----KVRAGEVFSRDGTVLDESTVL 65
           P  +G+ P+R++     +    +D L  RF         KV AGEV    G  + E++  
Sbjct: 7   PVRDGLNPSRIRQPDDGMWTTTLDYLLERFPQDAVRLREKVAAGEVVDEKGVGITETSAF 66

Query: 66  PPGSHVYLYRDLPDEVDVPFDIPVLYRDDDIVVVDKPHFLATMPRGGHVTQTALVRLRRE 125
            P   VYLYRD P E  VPF+I +LYRD++I+VVDKPHFLA+ PRG ++ ++ALVRLRR+
Sbjct: 67  APRRFVYLYRDAPVEARVPFEIDILYRDENILVVDKPHFLASTPRGRYIAESALVRLRRD 126

Query: 126 LDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPKIALPAT 185
           L+LPEL+PAHRLDR+TAG+LLFTV +  R  YQTMFA   V K Y A A    +++ P  
Sbjct: 127 LELPELSPAHRLDRVTAGLLLFTVHQAARRDYQTMFAERRVAKEYEAIARHDAQVSTPVV 186

Query: 186 LRSRIVKHRGRLQAFEEPGEPNAETYVEAV----GDGLYRLTPRTGRTHQLRVHMASIGL 241
           +RSRIVK RG L+A E  GEPN+E+ +E +    G   YRLTP TG+THQLR+HM S+GL
Sbjct: 187 VRSRIVKERGVLKAAEIEGEPNSESRIELIETRDGFARYRLTPHTGKTHQLRLHMTSLGL 246

Query: 242 PITGDPFYPTVIDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVSRRTL 290
           PI GD FYP   DVA  D+S PL+LL+K L F+DP +G  + F SRRTL
Sbjct: 247 PIHGDNFYPDFYDVAAEDYSNPLRLLSKVLEFEDPKTGRLQRFESRRTL 295


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.322    0.142    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 2,673,425,467
Number of extensions: 126248089
Number of successful extensions: 278320
Number of sequences better than 10.0: 7456
Number of HSP's gapped: 269678
Number of HSP's successfully gapped: 7807
Length of query: 291
Length of database: 4,236,830,644
Length adjustment: 137
Effective length of query: 154
Effective length of database: 2,523,253,276
Effective search space: 388581004504
Effective search space used: 388581004504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)