BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_1769 (99 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QTA3|A0QTA3_MYCS2 Tax_Id=246196 SubName: Full=UsfY protein;... 129 1e-28 tr|A0QTC5|A0QTC5_MYCS2 Tax_Id=246196 SubName: Full=UsfY protein;... 84 7e-15 tr|A4TF08|A4TF08_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 82 2e-14 tr|Q1BCJ7|Q1BCJ7_MYCSS Tax_Id=164756 SubName: Full=Putative unch... 80 6e-14 tr|A3PW29|A3PW29_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 80 6e-14 tr|A1UCE6|A1UCE6_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 80 6e-14 tr|A1T5N4|A1T5N4_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 75 2e-12 tr|A0QTB1|A0QTB1_MYCS2 Tax_Id=246196 SubName: Full=UsfY protein;... 65 2e-09 tr|D5PCX6|D5PCX6_9MYCO Tax_Id=525368 (usfY)SubName: Full=UsfY pr... 58 4e-07 tr|Q73UG0|Q73UG0_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 56 1e-06 tr|A0QKG3|A0QKG3_MYCA1 Tax_Id=243243 SubName: Full=UsfY protein;... 56 1e-06 tr|B2HDY7|B2HDY7_MYCMM Tax_Id=216594 (usfY)SubName: Full=Mycobac... 55 4e-06 tr|A0PRK2|A0PRK2_MYCUA Tax_Id=362242 (usfY)SubName: Full=Mycobac... 55 4e-06 tr|Q7D5S0|Q7D5S0_MYCTU Tax_Id=1773 (usfY)SubName: Full=Putative ... 54 6e-06 tr|P96893|P96893_MYCBO Tax_Id=1765 (usfY)SubName: Full=Putative ... 54 6e-06 tr|C6DL25|C6DL25_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 54 6e-06 tr|C1AH62|C1AH62_MYCBT Tax_Id=561275 (usfY)SubName: Full=Putativ... 54 6e-06 tr|A5WSK3|A5WSK3_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 54 6e-06 tr|A5U7W2|A5U7W2_MYCTA Tax_Id=419947 (usfY)SubName: Full=Putativ... 54 6e-06 tr|A1KNU0|A1KNU0_MYCBP Tax_Id=410289 (usfY)SubName: Full=Putativ... 54 6e-06 tr|Q7BW14|Q7BW14_MYCTU Tax_Id=1773 (usfY)SubName: Full=UsfY;[Myc... 54 6e-06 tr|D6G378|D6G378_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 54 6e-06 tr|D6FRJ0|D6FRJ0_MYCTU Tax_Id=611304 SubName: Full=Putative unch... 54 6e-06 tr|D6F9T8|D6F9T8_MYCTU Tax_Id=611302 SubName: Full=Putative unch... 54 6e-06 tr|D5ZLG7|D5ZLG7_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 54 6e-06 tr|D5Z8D3|D5Z8D3_MYCTU Tax_Id=537209 SubName: Full=Putative unch... 54 6e-06 tr|D5YWP0|D5YWP0_MYCTU Tax_Id=515616 SubName: Full=Putative unch... 54 6e-06 tr|D5YJQ6|D5YJQ6_MYCTU Tax_Id=520140 SubName: Full=Putative unch... 54 6e-06 tr|D5Y8M1|D5Y8M1_MYCTU Tax_Id=520141 SubName: Full=Putative unch... 54 6e-06 tr|D5XYV9|D5XYV9_MYCTU Tax_Id=515617 SubName: Full=Putative unch... 54 6e-06 tr|A4KLI4|A4KLI4_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 54 6e-06 tr|A2VP84|A2VP84_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 54 6e-06 tr|A1TEB7|A1TEB7_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 51 4e-05 tr|A4T6K2|A4T6K2_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 50 9e-05 tr|B1MBH9|B1MBH9_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 45 0.003 tr|A3PUZ6|A3PUZ6_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 45 0.003 tr|Q744F8|Q744F8_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 45 0.004 tr|A0Q9Y4|A0Q9Y4_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 44 0.006 tr|D5P8W7|D5P8W7_9MYCO Tax_Id=525368 SubName: Full=Putative unch... 42 0.024 tr|Q5YW94|Q5YW94_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 42 0.032 tr|D5PNR6|D5PNR6_COREQ Tax_Id=525370 SubName: Full=Putative unch... 41 0.041 tr|D5PNM4|D5PNM4_COREQ Tax_Id=525370 SubName: Full=Putative unch... 41 0.041 tr|Q1BDL1|Q1BDL1_MYCSS Tax_Id=164756 SubName: Full=Putative unch... 37 0.78 tr|A1UBD0|A1UBD0_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 37 0.78 tr|D6FLJ5|D6FLJ5_MYCTU Tax_Id=611303 SubName: Full=Putative unch... 37 0.78 >tr|A0QTA3|A0QTA3_MYCS2 Tax_Id=246196 SubName: Full=UsfY protein;[Mycobacterium smegmatis] Length = 99 Score = 129 bits (324), Expect = 1e-28 Identities = 65/99 (65%), Positives = 65/99 (65%) Query: 1 MADEPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXX 60 MADEPVDHARTTRPHAGETMKDARNLPGLAIIG TDHMSI Sbjct: 1 MADEPVDHARTTRPHAGETMKDARNLPGLAIIGVSLVVFVSSLVAFATDHMSIGGMLVGL 60 Query: 61 XXXXXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 TEHYRVRKNEERWYANHPGIMRQHPS Sbjct: 61 AAVGAVVGGAWLATEHYRVRKNEERWYANHPGIMRQHPS 99 >tr|A0QTC5|A0QTC5_MYCS2 Tax_Id=246196 SubName: Full=UsfY protein;[Mycobacterium smegmatis] Length = 102 Score = 83.6 bits (205), Expect = 7e-15 Identities = 42/96 (43%), Positives = 49/96 (51%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDHARTTRPHAGE+MKD +P L +IG T H + Sbjct: 6 DPVDHARTTRPHAGESMKDNMIMPALIVIGLALVTFVGSLAAFATKHHDVGLTLVSLAAA 65 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH RVR+ EERWYA HPG+MRQ PS Sbjct: 66 GFVVGALWLALEHLRVRRIEERWYAEHPGVMRQGPS 101 >tr|A4TF08|A4TF08_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein;[Mycobacterium gilvum] Length = 102 Score = 82.0 bits (201), Expect = 2e-14 Identities = 40/96 (41%), Positives = 48/96 (50%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRPHAGE+MKD + +PGL +IG T H + Sbjct: 6 DPVDHVRTTRPHAGESMKDNKIMPGLVVIGLSLVSFVAMLSAFATSHHDVGVMLGAIAAA 65 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH RVR+ EERWYA HPG RQ P+ Sbjct: 66 GFVLGGGWLFIEHQRVRRLEERWYAEHPGAWRQRPN 101 >tr|Q1BCJ7|Q1BCJ7_MYCSS Tax_Id=164756 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 102 Score = 80.5 bits (197), Expect = 6e-14 Identities = 39/97 (40%), Positives = 50/97 (51%) Query: 3 DEPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXX 62 ++PVDHARTTRPHAGETMKD +N+P L ++G T + ++ Sbjct: 5 EDPVDHARTTRPHAGETMKDTKNMPALVLLGFALVTFVAALAAHATANHTVGVIVGCISA 64 Query: 63 XXXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH RV+ EERWYA HP + RQ PS Sbjct: 65 VLFVVAGAWFLIEHRRVKGIEERWYAEHPEVQRQRPS 101 >tr|A3PW29|A3PW29_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 110 Score = 80.5 bits (197), Expect = 6e-14 Identities = 39/97 (40%), Positives = 50/97 (51%) Query: 3 DEPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXX 62 ++PVDHARTTRPHAGETMKD +N+P L ++G T + ++ Sbjct: 13 EDPVDHARTTRPHAGETMKDTKNMPALVLLGFALVTFVAALAAHATANHTVGVIVGCISA 72 Query: 63 XXXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH RV+ EERWYA HP + RQ PS Sbjct: 73 VLFVVAGAWFLIEHRRVKGIEERWYAEHPEVQRQRPS 109 >tr|A1UCE6|A1UCE6_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 102 Score = 80.5 bits (197), Expect = 6e-14 Identities = 39/97 (40%), Positives = 50/97 (51%) Query: 3 DEPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXX 62 ++PVDHARTTRPHAGETMKD +N+P L ++G T + ++ Sbjct: 5 EDPVDHARTTRPHAGETMKDTKNMPALVLLGFALVTFVAALAAHATANHTVGVIVGCISA 64 Query: 63 XXXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH RV+ EERWYA HP + RQ PS Sbjct: 65 VLFVVAGAWFLIEHRRVKGIEERWYAEHPEVQRQRPS 101 >tr|A1T5N4|A1T5N4_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein;[Mycobacterium vanbaalenii] Length = 102 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/97 (38%), Positives = 49/97 (50%) Query: 3 DEPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXX 62 ++PVDH RTTRPHAGE+MKD + +PGL +IG T + + Sbjct: 5 NDPVDHVRTTRPHAGESMKDNKIMPGLVVIGLALVSFVSALAAFATVNHDVGVMLGALGL 64 Query: 63 XXXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH+RVR E+ WYA HPG+ RQ P+ Sbjct: 65 AGFVVGGGWLMIEHHRVRHLEDVWYAQHPGVPRQRPN 101 >tr|A0QTB1|A0QTB1_MYCS2 Tax_Id=246196 SubName: Full=UsfY protein;[Mycobacterium smegmatis] Length = 101 Score = 65.5 bits (158), Expect = 2e-09 Identities = 33/97 (34%), Positives = 43/97 (44%) Query: 2 ADEPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXX 61 A +PVDHARTTRPHAGET+KD N+P L ++ T H ++ Sbjct: 5 AKDPVDHARTTRPHAGETLKDTANIPALILLFLGGVSFVSCLFAFSTSHETVGIVLAVVA 64 Query: 62 XXXXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHP 98 EH RV E +W A HP + + P Sbjct: 65 ALLFVVSGAWLVVEHRRVTHKERQWNAAHPEVHQSRP 101 >tr|D5PCX6|D5PCX6_9MYCO Tax_Id=525368 (usfY)SubName: Full=UsfY protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 103 Score = 57.8 bits (138), Expect = 4e-07 Identities = 30/96 (31%), Positives = 43/96 (44%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG ++ + H + Sbjct: 7 DPVDHLRTTRPLAGESLIDVLHWPGYLLVVAGVVGACGSLAAFGSGHHNEGMTAGVLAVI 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH+R+R+ ERWYA HP + RQ P+ Sbjct: 67 AAVLGLVWVGLEHWRIRRIAERWYAEHPEVHRQWPA 102 >tr|Q73UG0|Q73UG0_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 103 Score = 56.2 bits (134), Expect = 1e-06 Identities = 30/96 (31%), Positives = 41/96 (42%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG ++ T H Sbjct: 7 DPVDHLRTTRPLAGESLIDVLHWPGYLLVVAGVVGACGSLAAFATGHHHEGMTAGVTAVI 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH R+R+ +RWYA HP + RQ P+ Sbjct: 67 AAVLGLVWLAVEHRRIRRIADRWYAEHPEVHRQWPA 102 >tr|A0QKG3|A0QKG3_MYCA1 Tax_Id=243243 SubName: Full=UsfY protein;[Mycobacterium avium] Length = 103 Score = 56.2 bits (134), Expect = 1e-06 Identities = 30/96 (31%), Positives = 41/96 (42%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG ++ T H Sbjct: 7 DPVDHLRTTRPLAGESLIDVLHWPGYLLVVAGVVGACGSLAAFATGHHHEGMTAGVTAVI 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 EH R+R+ +RWYA HP + RQ P+ Sbjct: 67 AAVLGLVWLAVEHRRIRRIADRWYAEHPEVHRQWPA 102 >tr|B2HDY7|B2HDY7_MYCMM Tax_Id=216594 (usfY)SubName: Full=Mycobacterial conserved protein, UsfY;[Mycobacterium marinum] Length = 103 Score = 54.7 bits (130), Expect = 4e-06 Identities = 30/93 (32%), Positives = 40/93 (43%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG ++ T H S Sbjct: 7 DPVDHLRTTRPLAGESLIDVLHWPGYLLVVAGVIGGVGSLAAFGTGHHSEGMASGVVALT 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH RVR+ +RWY+ HP + RQ Sbjct: 67 VAVVGLIWLAFEHRRVRRIADRWYSEHPEVRRQ 99 >tr|A0PRK2|A0PRK2_MYCUA Tax_Id=362242 (usfY)SubName: Full=Mycobacterial conserved protein, UsfY;[Mycobacterium ulcerans] Length = 103 Score = 54.7 bits (130), Expect = 4e-06 Identities = 30/93 (32%), Positives = 40/93 (43%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG ++ T H S Sbjct: 7 DPVDHLRTTRPLAGESLIDVLHWPGYLLVVAGVIGGVGSLAAFGTGHHSEGMASGVVALT 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH RVR+ +RWY+ HP + RQ Sbjct: 67 VAVVGLIWLAFEHRRVRRIADRWYSGHPEVRRQ 99 >tr|Q7D5S0|Q7D5S0_MYCTU Tax_Id=1773 (usfY)SubName: Full=Putative uncharacterized protein; SubName: Full=Putative uncharacterized protein usfY;[Mycobacterium tuberculosis] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|P96893|P96893_MYCBO Tax_Id=1765 (usfY)SubName: Full=Putative uncharacterized protein Rv3288c; SubName: Full=Putative uncharacterized protein usfY;[Mycobacterium bovis] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|C6DL25|C6DL25_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|C1AH62|C1AH62_MYCBT Tax_Id=561275 (usfY)SubName: Full=Putative uncharacterized protein usfY;[Mycobacterium bovis] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|A5WSK3|A5WSK3_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|A5U7W2|A5U7W2_MYCTA Tax_Id=419947 (usfY)SubName: Full=Putative uncharacterized protein usfY;[Mycobacterium tuberculosis] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|A1KNU0|A1KNU0_MYCBP Tax_Id=410289 (usfY)SubName: Full=Putative uncharacterized protein usfY;[Mycobacterium bovis] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|Q7BW14|Q7BW14_MYCTU Tax_Id=1773 (usfY)SubName: Full=UsfY;[Mycobacterium tuberculosis] Length = 103 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 7 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 67 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 99 >tr|D6G378|D6G378_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D6FRJ0|D6FRJ0_MYCTU Tax_Id=611304 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis K85] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D6F9T8|D6F9T8_MYCTU Tax_Id=611302 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T46] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D5ZLG7|D5ZLG7_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D5Z8D3|D5Z8D3_MYCTU Tax_Id=537209 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis GM 1503] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D5YWP0|D5YWP0_MYCTU Tax_Id=515616 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis 02_1987] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D5YJQ6|D5YJQ6_MYCTU Tax_Id=520140 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis EAS054] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D5Y8M1|D5Y8M1_MYCTU Tax_Id=520141 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T85] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|D5XYV9|D5XYV9_MYCTU Tax_Id=515617 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T92] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|A4KLI4|A4KLI4_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 137 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 100 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 101 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 133 >tr|A2VP84|A2VP84_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 103 Score = 53.9 bits (128), Expect = 6e-06 Identities = 30/93 (32%), Positives = 39/93 (41%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RTTRP AGE++ D + PG +I T H + Sbjct: 7 DPVDHLRTTRPLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQ 96 EH R+RK +RWY HP + RQ Sbjct: 67 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQ 99 >tr|A1TEB7|A1TEB7_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein;[Mycobacterium vanbaalenii] Length = 103 Score = 51.2 bits (121), Expect = 4e-05 Identities = 28/96 (29%), Positives = 38/96 (39%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDHART R HAGETMK N PGL +G S Sbjct: 7 DPVDHARTYRQHAGETMKAGVNAPGLIAVGIGVLSLVIGLFSFANGSRSAGVAAVVVAVL 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 H++V+K ++ W+ HP + P+ Sbjct: 67 LVGGGLAWLARAHHKVQKKQQDWHREHPEAPYEPPT 102 >tr|A4T6K2|A4T6K2_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein;[Mycobacterium gilvum] Length = 103 Score = 50.1 bits (118), Expect = 9e-05 Identities = 28/98 (28%), Positives = 37/98 (37%) Query: 2 ADEPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXX 61 + +PVDHARTTR HAGETMK N PGL +G Sbjct: 5 SQDPVDHARTTRQHAGETMKAGVNAPGLIAVGLGVLSLVVGLFSFANSSTITGIVGVVLA 64 Query: 62 XXXXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHPS 99 H +V+ +E W+ HP + P+ Sbjct: 65 VLLIAGGLAWLARTHRKVQLQQEEWHRKHPQAHYEPPT 102 >tr|B1MBH9|B1MBH9_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 99 Score = 45.1 bits (105), Expect = 0.003 Identities = 20/29 (68%), Positives = 23/29 (79%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAII 32 +PVDHART RPHAGE++KD PGLA I Sbjct: 7 DPVDHARTFRPHAGESLKDRVAWPGLAFI 35 >tr|A3PUZ6|A3PUZ6_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 102 Score = 45.1 bits (105), Expect = 0.003 Identities = 27/95 (28%), Positives = 34/95 (35%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDHART +P AGE+M D PGL +I + Sbjct: 7 DPVDHARTYQPRAGESMIDTLWFPGLLLIALGVIGLAAIVASAAYGEGHLVLPLALVTGA 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQHP 98 EH RV + E W + HP HP Sbjct: 67 IVTAGGGLIALEHRRVLRIERLWQSEHPDTRHHHP 101 >tr|Q744F8|Q744F8_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 114 Score = 44.7 bits (104), Expect = 0.004 Identities = 27/87 (31%), Positives = 34/87 (39%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDHART R HAGET N+PGLA H++ Sbjct: 18 DPVDHARTFRQHAGETFTYGANVPGLAGSAVAVVAMTVGVFAVAAGHLTGGAIALIVAAV 77 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANH 90 H +VR+ E RW+A H Sbjct: 78 VGAVSAGWLLRTHRKVREAELRWHAAH 104 >tr|A0Q9Y4|A0Q9Y4_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 103 Score = 43.9 bits (102), Expect = 0.006 Identities = 27/87 (31%), Positives = 33/87 (37%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDHART R HAGET N+PGLA H++ Sbjct: 7 DPVDHARTFRQHAGETFTYGANVPGLAGSAVAVVAMTVGVFAVAAGHLTGGAIALIVAAV 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANH 90 H +VR E RW+A H Sbjct: 67 VGAVSAGWLLRTHRKVRDAELRWHAAH 93 >tr|D5P8W7|D5P8W7_9MYCO Tax_Id=525368 SubName: Full=Putative uncharacterized protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 132 Score = 42.0 bits (97), Expect = 0.024 Identities = 26/85 (30%), Positives = 31/85 (36%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDH RT R HAGET+ N PGLA T H + Sbjct: 36 DPVDHQRTARRHAGETVTYGANAPGLAGSAVAVVALTVGLFALATGHAAAGWTAVVLAAV 95 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYA 88 H RVR+ E W+A Sbjct: 96 LGAASAVWLVRTHRRVRETELAWHA 120 >tr|Q5YW94|Q5YW94_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 103 Score = 41.6 bits (96), Expect = 0.032 Identities = 16/27 (59%), Positives = 21/27 (77%) Query: 7 DHARTTRPHAGETMKDARNLPGLAIIG 33 DHART R HAGE ++D RN PG+ ++G Sbjct: 16 DHARTMRSHAGEAIEDTRNWPGMILVG 42 >tr|D5PNR6|D5PNR6_COREQ Tax_Id=525370 SubName: Full=Putative uncharacterized protein;[Rhodococcus equi ATCC 33707] Length = 95 Score = 41.2 bits (95), Expect = 0.041 Identities = 17/29 (58%), Positives = 21/29 (72%) Query: 5 PVDHARTTRPHAGETMKDARNLPGLAIIG 33 P+D A TTR H GE++ D RN PGL +IG Sbjct: 7 PLDRAHTTREHPGESIDDTRNWPGLGLIG 35 >tr|D5PNM4|D5PNM4_COREQ Tax_Id=525370 SubName: Full=Putative uncharacterized protein;[Rhodococcus equi ATCC 33707] Length = 94 Score = 41.2 bits (95), Expect = 0.041 Identities = 18/31 (58%), Positives = 23/31 (74%) Query: 3 DEPVDHARTTRPHAGETMKDARNLPGLAIIG 33 ++P D A TTR H GE ++DARN PG A+IG Sbjct: 4 NDPRDLAHTTREHPGEAIEDARNWPGYALIG 34 >tr|Q1BDL1|Q1BDL1_MYCSS Tax_Id=164756 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 102 Score = 37.0 bits (84), Expect = 0.78 Identities = 24/94 (25%), Positives = 31/94 (32%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDHART +P AGE+ D PGL +I + Sbjct: 7 DPVDHARTYQPRAGESFIDTLWFPGLLLIALGVIGLAAIVASAAYGEGHLVLPLALVTGA 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQH 97 EH RV + E W + H H Sbjct: 67 IVTAGGGLIALEHRRVLRIERLWQSQHRDTRHHH 100 >tr|A1UBD0|A1UBD0_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 102 Score = 37.0 bits (84), Expect = 0.78 Identities = 24/94 (25%), Positives = 31/94 (32%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAIIGXXXXXXXXXXXXXXTDHMSIXXXXXXXXXX 63 +PVDHART +P AGE+ D PGL +I + Sbjct: 7 DPVDHARTYQPRAGESFIDTLWFPGLLLIALGVIGLAAIVASAAYGEGHLVLPLALVTGA 66 Query: 64 XXXXXXXXXXTEHYRVRKNEERWYANHPGIMRQH 97 EH RV + E W + H H Sbjct: 67 IVTAGGGLIALEHRRVLRIERLWQSQHRDTRHHH 100 >tr|D6FLJ5|D6FLJ5_MYCTU Tax_Id=611303 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis CPHL_A] Length = 114 Score = 37.0 bits (84), Expect = 0.78 Identities = 16/29 (55%), Positives = 21/29 (72%) Query: 4 EPVDHARTTRPHAGETMKDARNLPGLAII 32 +PVDH RTTRP AGE++ D + PG +I Sbjct: 41 DPVDHLRTTRPLAGESLIDVVHWPGYLLI 69 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.317 0.131 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 550,565,526 Number of extensions: 9563776 Number of successful extensions: 15148 Number of sequences better than 10.0: 49 Number of HSP's gapped: 15115 Number of HSP's successfully gapped: 49 Length of query: 99 Length of database: 4,236,830,644 Length adjustment: 68 Effective length of query: 31 Effective length of database: 3,386,295,892 Effective search space: 104975172652 Effective search space used: 104975172652 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 75 (33.5 bits)