BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_1915
         (101 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QTP3|A0QTP3_MYCS2 Tax_Id=246196 SubName: Full=Anti-sigma fa...   214   4e-54
tr|Q9XCD7|Q9XCD7_MYCSM Tax_Id=1772 SubName: Full=Putative unchar...   214   4e-54
tr|Q1BC92|Q1BC92_MYCSS Tax_Id=164756 SubName: Full=Putative unch...   186   8e-46
tr|A1UCQ2|A1UCQ2_MYCSK Tax_Id=189918 SubName: Full=Putative unch...   186   8e-46
tr|A3PWD9|A3PWD9_MYCSJ Tax_Id=164757 SubName: Full=Putative unch...   184   2e-45
tr|A4TFC4|A4TFC4_MYCGI Tax_Id=350054 SubName: Full=Putative unch...   181   3e-44
tr|A1T601|A1T601_MYCVP Tax_Id=350058 SubName: Full=Putative unch...   181   3e-44
tr|B2HET7|B2HET7_MYCMM Tax_Id=216594 SubName: Full=Anti-sigma fa...   135   1e-30
tr|A0PRB8|A0PRB8_MYCUA Tax_Id=362242 SubName: Full=Anti-sigma fa...   135   2e-30
tr|Q8VJ46|Q8VJ46_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE ANTI-S...   130   5e-29
tr|Q7TWZ1|Q7TWZ1_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE ANTI-S...   130   5e-29
tr|C6DXG5|C6DXG5_MYCTK Tax_Id=478434 SubName: Full=Anti-sigma fa...   130   5e-29
tr|C1AGZ3|C1AGZ3_MYCBT Tax_Id=561275 SubName: Full=Putative anti...   130   5e-29
tr|A5WSD4|A5WSD4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   130   5e-29
tr|A5U7P4|A5U7P4_MYCTA Tax_Id=419947 SubName: Full=Putative anti...   130   5e-29
tr|A1KNM2|A1KNM2_MYCBP Tax_Id=410289 SubName: Full=Possible anti...   130   5e-29
tr|D6G2M4|D6G2M4_MYCTU Tax_Id=478435 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D6FQY7|D6FQY7_MYCTU Tax_Id=611304 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D6FLC6|D6FLC6_MYCTU Tax_Id=611303 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D6F9L4|D6F9L4_MYCTU Tax_Id=611302 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D5ZL97|D5ZL97_MYCTU Tax_Id=537210 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D5Z865|D5Z865_MYCTU Tax_Id=537209 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D5YWH2|D5YWH2_MYCTU Tax_Id=515616 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D5YJI7|D5YJI7_MYCTU Tax_Id=520140 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D5Y8F0|D5Y8F0_MYCTU Tax_Id=520141 SubName: Full=Anti-sigma fa...   130   5e-29
tr|D5XYN8|D5XYN8_MYCTU Tax_Id=515617 SubName: Full=Anti-sigma fa...   130   5e-29
tr|A4KLC1|A4KLC1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   130   5e-29
tr|A2VP20|A2VP20_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   130   5e-29
tr|D5PD63|D5PD63_9MYCO Tax_Id=525368 SubName: Full=Anti-sigma fa...   124   3e-27
tr|Q73UP3|Q73UP3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   122   1e-26
tr|B1MF12|B1MF12_MYCA9 Tax_Id=561007 SubName: Full=Putative unch...   122   1e-26
tr|D0LF22|D0LF22_GORB4 Tax_Id=526226 SubName: Full=Anti-sigma fa...   104   4e-21
tr|Q5YQV7|Q5YQV7_NOCFA Tax_Id=37329 SubName: Full=Putative anti-...    99   1e-19
tr|C1B1F5|C1B1F5_RHOOB Tax_Id=632772 SubName: Full=Putative anti...    98   4e-19
tr|C0ZX10|C0ZX10_RHOE4 Tax_Id=234621 SubName: Full=Anti-sigma fa...    98   4e-19
tr|C3JG39|C3JG39_RHOER Tax_Id=596309 SubName: Full=Anti-sigma fa...    98   4e-19
tr|Q0S2W7|Q0S2W7_RHOSR Tax_Id=101510 SubName: Full=Possible anti...    97   6e-19
tr|D5PQH1|D5PQH1_COREQ Tax_Id=525370 SubName: Full=Protein famil...    96   1e-18
tr|A4FNH4|A4FNH4_SACEN Tax_Id=405948 SubName: Full=Possible anti...    93   9e-18
tr|D5UVF0|D5UVF0_TSUPA Tax_Id=521096 SubName: Full=Anti-sigma fa...    92   3e-17
tr|C7MXX1|C7MXX1_SACVD Tax_Id=471857 SubName: Full=Anti-sigma fa...    87   7e-16
tr|A3RDV9|A3RDV9_RHOOP Tax_Id=37919 SubName: Full=Putative anti-...    87   9e-16
tr|C6WJ19|C6WJ19_ACTMD Tax_Id=446462 SubName: Full=Anti-sigma fa...    86   1e-15
tr|C4RQX3|C4RQX3_9ACTO Tax_Id=219305 SubName: Full=Putative unch...    86   2e-15
tr|A8M3C1|A8M3C1_SALAI Tax_Id=391037 SubName: Full=Anti-sigma fa...    84   6e-15

>tr|A0QTP3|A0QTP3_MYCS2 Tax_Id=246196 SubName: Full=Anti-sigma
           factor, family protein;[Mycobacterium smegmatis]
          Length = 101

 Score =  214 bits (544), Expect = 4e-54
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 1   MSETEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLR 60
           MSETEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLR
Sbjct: 1   MSETEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLR 60

Query: 61  HYGIEERVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIRG 101
           HYGIEERVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIRG
Sbjct: 61  HYGIEERVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIRG 101


>tr|Q9XCD7|Q9XCD7_MYCSM Tax_Id=1772 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium smegmatis]
          Length = 101

 Score =  214 bits (544), Expect = 4e-54
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 1   MSETEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLR 60
           MSETEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLR
Sbjct: 1   MSETEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLR 60

Query: 61  HYGIEERVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIRG 101
           HYGIEERVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIRG
Sbjct: 61  HYGIEERVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIRG 101


>tr|Q1BC92|Q1BC92_MYCSS Tax_Id=164756 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 97

 Score =  186 bits (472), Expect = 8e-46
 Identities = 83/94 (88%), Positives = 89/94 (94%)

Query: 7   EDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEE 66
           ++ERWTPP+GP+DPEHPECAAVIAEVWTLLDGECTPETRDKLK HLEECP CLRHYG+EE
Sbjct: 3   DEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGVEE 62

Query: 67  RVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIR 100
           RVKRLIAAKC GEKAPD LRERLRI+ISRTTI R
Sbjct: 63  RVKRLIAAKCGGEKAPDRLRERLRIEISRTTIYR 96


>tr|A1UCQ2|A1UCQ2_MYCSK Tax_Id=189918 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 97

 Score =  186 bits (472), Expect = 8e-46
 Identities = 83/94 (88%), Positives = 89/94 (94%)

Query: 7   EDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEE 66
           ++ERWTPP+GP+DPEHPECAAVIAEVWTLLDGECTPETRDKLK HLEECP CLRHYG+EE
Sbjct: 3   DEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGVEE 62

Query: 67  RVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIR 100
           RVKRLIAAKC GEKAPD LRERLRI+ISRTTI R
Sbjct: 63  RVKRLIAAKCGGEKAPDRLRERLRIEISRTTIYR 96


>tr|A3PWD9|A3PWD9_MYCSJ Tax_Id=164757 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 97

 Score =  184 bits (468), Expect = 2e-45
 Identities = 82/94 (87%), Positives = 88/94 (93%)

Query: 7   EDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEE 66
           ++ERWTPP+GP+DPEHPECAAVIAEVWTLLDGECTPETRDKLK HLEECP CLRHYG+EE
Sbjct: 3   DEERWTPPVGPVDPEHPECAAVIAEVWTLLDGECTPETRDKLKHHLEECPACLRHYGVEE 62

Query: 67  RVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIR 100
           RVKRLIA KC GEKAPD LRERLRI+ISRTTI R
Sbjct: 63  RVKRLIAVKCGGEKAPDRLRERLRIEISRTTIYR 96


>tr|A4TFC4|A4TFC4_MYCGI Tax_Id=350054 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium gilvum]
          Length = 109

 Score =  181 bits (459), Expect = 3e-44
 Identities = 80/97 (82%), Positives = 90/97 (92%)

Query: 4   TEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYG 63
           T+  +ERWTPP+GPIDPEHPECAAVIAEVWTLLDGECT ETRDKL+QHLEECP CLRHYG
Sbjct: 11  TDNPEERWTPPVGPIDPEHPECAAVIAEVWTLLDGECTVETRDKLRQHLEECPACLRHYG 70

Query: 64  IEERVKRLIAAKCSGEKAPDSLRERLRIQISRTTIIR 100
           +EE++KRLIA KCSGE+AP+  RERLRIQIS+TTIIR
Sbjct: 71  VEEKIKRLIAMKCSGERAPEGFRERLRIQISQTTIIR 107


>tr|A1T601|A1T601_MYCVP Tax_Id=350058 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium vanbaalenii]
          Length = 110

 Score =  181 bits (458), Expect = 3e-44
 Identities = 82/93 (88%), Positives = 90/93 (96%)

Query: 8   DERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEER 67
           ++ WTPPIGPIDPEHPECAAVIAEVWTLLDGECT ETRDKL+QHLEECPTCLR+YG+EER
Sbjct: 16  EDTWTPPIGPIDPEHPECAAVIAEVWTLLDGECTVETRDKLRQHLEECPTCLRYYGVEER 75

Query: 68  VKRLIAAKCSGEKAPDSLRERLRIQISRTTIIR 100
           VK+LIAAKCSGE+APD LRERLRIQIS+TTIIR
Sbjct: 76  VKKLIAAKCSGERAPDGLRERLRIQISQTTIIR 108


>tr|B2HET7|B2HET7_MYCMM Tax_Id=216594 SubName: Full=Anti-sigma
           factor;[Mycobacterium marinum]
          Length = 101

 Score =  135 bits (341), Expect = 1e-30
 Identities = 61/77 (79%), Positives = 69/77 (89%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR KL++HLE CP CL+HYG+EER+K LIA KC GEKAP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRQKLREHLEACPGCLKHYGLEERIKLLIATKCQGEKAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRER+R+QISRTTIIRG
Sbjct: 83  LRERVRLQISRTTIIRG 99


>tr|A0PRB8|A0PRB8_MYCUA Tax_Id=362242 SubName: Full=Anti-sigma
           factor;[Mycobacterium ulcerans]
          Length = 101

 Score =  135 bits (340), Expect = 2e-30
 Identities = 61/77 (79%), Positives = 69/77 (89%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR KL++HLE CP CL+HYG+EER+K LIA KC GEKAP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRQKLRKHLEACPGCLKHYGLEERIKLLIATKCQGEKAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRER+R+QISRTTIIRG
Sbjct: 83  LRERVRLQISRTTIIRG 99


>tr|Q8VJ46|Q8VJ46_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE
           ANTI-SIGMA FACTOR; SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|Q7TWZ1|Q7TWZ1_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE
           ANTI-SIGMA FACTOR;[Mycobacterium bovis]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|C6DXG5|C6DXG5_MYCTK Tax_Id=478434 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|C1AGZ3|C1AGZ3_MYCBT Tax_Id=561275 SubName: Full=Putative
           anti-sigma factor;[Mycobacterium bovis]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|A5WSD4|A5WSD4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           anti-sigma factor;[Mycobacterium tuberculosis]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|A5U7P4|A5U7P4_MYCTA Tax_Id=419947 SubName: Full=Putative
           anti-sigma factor;[Mycobacterium tuberculosis]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|A1KNM2|A1KNM2_MYCBP Tax_Id=410289 SubName: Full=Possible
           anti-sigma factor;[Mycobacterium bovis]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D6G2M4|D6G2M4_MYCTU Tax_Id=478435 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis KZN 605]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D6FQY7|D6FQY7_MYCTU Tax_Id=611304 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis K85]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D6FLC6|D6FLC6_MYCTU Tax_Id=611303 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis CPHL_A]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D6F9L4|D6F9L4_MYCTU Tax_Id=611302 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis T46]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D5ZL97|D5ZL97_MYCTU Tax_Id=537210 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis T17]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D5Z865|D5Z865_MYCTU Tax_Id=537209 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis GM 1503]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D5YWH2|D5YWH2_MYCTU Tax_Id=515616 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis 02_1987]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D5YJI7|D5YJI7_MYCTU Tax_Id=520140 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis EAS054]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D5Y8F0|D5Y8F0_MYCTU Tax_Id=520141 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis T85]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D5XYN8|D5XYN8_MYCTU Tax_Id=515617 SubName: Full=Anti-sigma
           factor;[Mycobacterium tuberculosis T92]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|A4KLC1|A4KLC1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           anti-sigma factor;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|A2VP20|A2VP20_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 101

 Score =  130 bits (327), Expect = 5e-29
 Identities = 57/77 (74%), Positives = 68/77 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGECTPETR++L++HLE CP CLRHYG+EER+K LI  KC G++AP+ 
Sbjct: 23  CAEVIAEVWTLLDGECTPETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEG 82

Query: 85  LRERLRIQISRTTIIRG 101
           LRERLR++I RTTIIRG
Sbjct: 83  LRERLRLEIRRTTIIRG 99


>tr|D5PD63|D5PD63_9MYCO Tax_Id=525368 SubName: Full=Anti-sigma
           factor family protein;[Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 100

 Score =  124 bits (312), Expect = 3e-27
 Identities = 57/86 (66%), Positives = 69/86 (80%), Gaps = 2/86 (2%)

Query: 17  PIDPEHPE--CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAA 74
           P D +H    CA VI +VW LLDGECTPE+RD+L++HLE CP C +HYG+EER+K LIA 
Sbjct: 12  PNDDDHGAVGCAEVIRQVWLLLDGECTPESRDQLRRHLEACPGCFKHYGLEERIKALIAT 71

Query: 75  KCSGEKAPDSLRERLRIQISRTTIIR 100
           KC GEKAP+ LRERLR++I RTTIIR
Sbjct: 72  KCRGEKAPEGLRERLRLEIRRTTIIR 97


>tr|Q73UP3|Q73UP3_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 104

 Score =  122 bits (307), Expect = 1e-26
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 2/87 (2%)

Query: 17  PIDPEHPE--CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAA 74
           P D  H    CA VI +VW LLDGEC P+TR++L++HLE CP C +HYG+EER+K LIA 
Sbjct: 16  PNDDSHGAVGCAEVIRQVWLLLDGECGPDTREQLRRHLEACPGCFKHYGLEERIKALIAT 75

Query: 75  KCSGEKAPDSLRERLRIQISRTTIIRG 101
           KC GEKAP+ LRERLR++I RTTIIRG
Sbjct: 76  KCKGEKAPEGLRERLRLEIRRTTIIRG 102


>tr|B1MF12|B1MF12_MYCA9 Tax_Id=561007 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium abscessus]
          Length = 102

 Score =  122 bits (307), Expect = 1e-26
 Identities = 53/76 (69%), Positives = 67/76 (88%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           CA VIAEVWTLLDGEC+PE+  +L+ HLEECP CL+HYGIEE++K L+A KC GEKAPD 
Sbjct: 21  CAEVIAEVWTLLDGECSPESSARLRHHLEECPGCLQHYGIEEQIKTLVARKCGGEKAPDG 80

Query: 85  LRERLRIQISRTTIIR 100
           LRERL+++IS+TT+I+
Sbjct: 81  LRERLKLKISQTTVIQ 96


>tr|D0LF22|D0LF22_GORB4 Tax_Id=526226 SubName: Full=Anti-sigma
          factor;[Gordonia bronchialis]
          Length = 103

 Score =  104 bits (259), Expect = 4e-21
 Identities = 46/84 (54%), Positives = 63/84 (75%), Gaps = 2/84 (2%)

Query: 18 IDPEHP--ECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAK 75
          +DPE    +C+AVIA+VW LLD EC P  R +L++HL+ CP CL HYGIE+++K LI  K
Sbjct: 5  LDPEFTSMDCSAVIADVWLLLDNECDPGARARLQEHLDACPACLAHYGIEQQLKALINRK 64

Query: 76 CSGEKAPDSLRERLRIQISRTTII 99
          C G++AP  LRERLR++I +T I+
Sbjct: 65 CGGDQAPAGLRERLRVEIRKTVIV 88


>tr|Q5YQV7|Q5YQV7_NOCFA Tax_Id=37329 SubName: Full=Putative
           anti-sigma factor;[Nocardia farcinica]
          Length = 95

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 41/78 (52%), Positives = 59/78 (75%)

Query: 24  ECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPD 83
           +C AV+A+VW +LDGEC   TR +L+ H++ C  C+  YGIEE++K L++ KC G+KAPD
Sbjct: 12  DCTAVLADVWLMLDGECDDATRARLQHHMDHCSPCIEAYGIEEKLKSLLSRKCGGDKAPD 71

Query: 84  SLRERLRIQISRTTIIRG 101
           SLR+RL+I+I R+  I G
Sbjct: 72  SLRDRLKIEIRRSVTITG 89


>tr|C1B1F5|C1B1F5_RHOOB Tax_Id=632772 SubName: Full=Putative
          anti-sigma factor;[Rhodococcus opacus]
          Length = 93

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 43/79 (54%), Positives = 60/79 (75%)

Query: 21 EHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEK 80
          E  +C+AVIA+VW +LD EC   +R +L++HL+EC +CL  YGIEE+VK L+  KC GE 
Sbjct: 8  EQLDCSAVIADVWLMLDSECDEASRARLQRHLDECGSCLEAYGIEEKVKSLVNRKCGGEH 67

Query: 81 APDSLRERLRIQISRTTII 99
          AP+SLR+RL I++ RT +I
Sbjct: 68 APESLRQRLSIELRRTILI 86


>tr|C0ZX10|C0ZX10_RHOE4 Tax_Id=234621 SubName: Full=Anti-sigma
          factor;[Rhodococcus erythropolis]
          Length = 93

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 41/79 (51%), Positives = 61/79 (77%)

Query: 21 EHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEK 80
          E  +C+AVIA+VW +LDGEC   +R +L++H+++C +CL  YGIEE+VK LI  KC G+ 
Sbjct: 8  ERLDCSAVIADVWLMLDGECDDSSRARLQRHIDDCGSCLEAYGIEEKVKSLINRKCGGDH 67

Query: 81 APDSLRERLRIQISRTTII 99
          AP+SLR+RL +++ RT +I
Sbjct: 68 APESLRQRLTVELRRTIVI 86


>tr|C3JG39|C3JG39_RHOER Tax_Id=596309 SubName: Full=Anti-sigma
          factor family protein;[Rhodococcus erythropolis SK121]
          Length = 93

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 41/79 (51%), Positives = 61/79 (77%)

Query: 21 EHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEK 80
          E  +C+AVIA+VW +LDGEC   +R +L++H+++C +CL  YGIEE+VK LI  KC G+ 
Sbjct: 8  ERLDCSAVIADVWLMLDGECDDSSRARLQRHIDDCGSCLEAYGIEEKVKSLINRKCGGDH 67

Query: 81 APDSLRERLRIQISRTTII 99
          AP+SLR+RL +++ RT +I
Sbjct: 68 APESLRQRLTVELRRTIVI 86


>tr|Q0S2W7|Q0S2W7_RHOSR Tax_Id=101510 SubName: Full=Possible
          anti-sigma factor;[Rhodococcus sp.]
          Length = 93

 Score = 97.1 bits (240), Expect = 6e-19
 Identities = 43/79 (54%), Positives = 60/79 (75%)

Query: 21 EHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEK 80
          E  +C+AVIA+VW +LD EC   +R +L++HL+EC +CL  YGIEE+VK L+  KC GE 
Sbjct: 8  EQLDCSAVIADVWLMLDRECDAASRARLQRHLDECGSCLEAYGIEEKVKSLVNRKCGGEH 67

Query: 81 APDSLRERLRIQISRTTII 99
          AP+SLR+RL I++ RT +I
Sbjct: 68 APESLRQRLSIELRRTILI 86


>tr|D5PQH1|D5PQH1_COREQ Tax_Id=525370 SubName: Full=Protein family
          anti-sigma factor;[Rhodococcus equi ATCC 33707]
          Length = 99

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 43/79 (54%), Positives = 55/79 (69%)

Query: 21 EHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEK 80
          E  +C+AVIA+VW LLD EC   +R +++ HLE C  C   YGIEE+VKRLI  KC G+ 
Sbjct: 8  EQLDCSAVIADVWLLLDSECDEHSRARIEHHLETCGACFAAYGIEEKVKRLIGRKCGGDH 67

Query: 81 APDSLRERLRIQISRTTII 99
          AP  LRERL I+I RT ++
Sbjct: 68 APAGLRERLSIEIRRTVVV 86


>tr|A4FNH4|A4FNH4_SACEN Tax_Id=405948 SubName: Full=Possible
           anti-sigma factor;[Saccharopolyspora erythraea]
          Length = 111

 Score = 93.2 bits (230), Expect = 9e-18
 Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 21  EHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEK 80
           EH  C  V+AEVW  LD EC  E R  L++HL++C +CL HYG+EE +K L+  KCSGE 
Sbjct: 7   EHTSCDDVLAEVWLFLDNECDRERRAILQRHLDDCGSCLEHYGLEEHIKALLHRKCSGEH 66

Query: 81  APDSLRERLRIQISRTTIIR 100
           AP  LR+RLR  I R T++R
Sbjct: 67  APKELRDRLRASI-RETVLR 85


>tr|D5UVF0|D5UVF0_TSUPA Tax_Id=521096 SubName: Full=Anti-sigma
          factor;[Tsukamurella paurometabola DSM 20162]
          Length = 93

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 36/75 (48%), Positives = 54/75 (72%)

Query: 24 ECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPD 83
          +C+AV+A++W LLD EC  E + +LK H++ C  CL HYGIE+++K L+  KC G++AP+
Sbjct: 14 DCSAVMADIWLLLDNECDAEAKARLKAHIDGCSQCLSHYGIEQQIKALVGRKCGGDRAPE 73

Query: 84 SLRERLRIQISRTTI 98
           LRERL I +  T +
Sbjct: 74 GLRERLTITLRHTEV 88


>tr|C7MXX1|C7MXX1_SACVD Tax_Id=471857 SubName: Full=Anti-sigma
           factor, TIGR02949 family;[Saccharomonospora viridis]
          Length = 116

 Score = 87.0 bits (214), Expect = 7e-16
 Identities = 38/76 (50%), Positives = 53/76 (69%)

Query: 25  CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDS 84
           C   +AE++ LLD ECTPE   +L++H+E+CP CL  YGI+E++K+L+A KC GE AP  
Sbjct: 19  CDDALAEIYLLLDKECTPERDAELRRHIEDCPPCLEEYGIDEQIKQLLARKCGGEHAPAE 78

Query: 85  LRERLRIQISRTTIIR 100
           L+ RL+  I RT   R
Sbjct: 79  LKHRLQESIRRTVAER 94


>tr|A3RDV9|A3RDV9_RHOOP Tax_Id=37919 SubName: Full=Putative
          anti-sigma factor; Flags: Fragment;[Rhodococcus opacus]
          Length = 77

 Score = 86.7 bits (213), Expect = 9e-16
 Identities = 38/70 (54%), Positives = 53/70 (75%)

Query: 30 AEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDSLRERL 89
          A+VW +LD EC   +R +L++HL+EC +CL  YGIEE+VK L+  KC GE AP+SLR+RL
Sbjct: 1  ADVWLMLDRECDEASRARLQRHLDECGSCLEAYGIEEKVKGLVNRKCGGEHAPESLRQRL 60

Query: 90 RIQISRTTII 99
           I++ RT +I
Sbjct: 61 SIELRRTILI 70


>tr|C6WJ19|C6WJ19_ACTMD Tax_Id=446462 SubName: Full=Anti-sigma
           factor;[Actinosynnema mirum]
          Length = 130

 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 21  EHPE--CAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSG 78
           EH E  C+ V++EVW  LD EC    R+ L  HL+EC  CL  YG+EE +K L+A KC G
Sbjct: 5   EHHETNCSEVLSEVWLFLDQECDQARRELLATHLDECHPCLEEYGLEEHLKALLARKCGG 64

Query: 79  EKAPDSLRERLRIQISRTTIIR 100
           + APD L+ RLR +I  T  +R
Sbjct: 65  DLAPDELKARLRARIRETVTVR 86


>tr|C4RQX3|C4RQX3_9ACTO Tax_Id=219305 SubName: Full=Putative
          uncharacterized protein;[Micromonospora sp. ATCC 39149]
          Length = 95

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 37/79 (46%), Positives = 52/79 (65%)

Query: 20 PEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGE 79
          P   +C  V+AEV+  LD EC  E R  +++HL+EC  CLR YG+E+ VK L+A  C  E
Sbjct: 6  PHETDCREVLAEVYFYLDLECAEERRTLIRRHLDECGPCLREYGLEQEVKALVARCCGNE 65

Query: 80 KAPDSLRERLRIQISRTTI 98
           APD LRERLR++++   +
Sbjct: 66 TAPDQLRERLRVRLTELVV 84


>tr|A8M3C1|A8M3C1_SALAI Tax_Id=391037 SubName: Full=Anti-sigma
          factor RshA;[Salinispora arenicola]
          Length = 95

 Score = 84.0 bits (206), Expect = 6e-15
 Identities = 37/80 (46%), Positives = 51/80 (63%)

Query: 19 DPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSG 78
          DP   +C  V+AEV+  LD EC  E R+ ++ HL+EC  CLR YGIE  V+ L+A  C  
Sbjct: 5  DPHETDCREVLAEVYLYLDLECAEERRELIQHHLDECGPCLREYGIEREVQALVARCCGN 64

Query: 79 EKAPDSLRERLRIQISRTTI 98
          E APD LR+RLR +++   +
Sbjct: 65 ETAPDQLRQRLRSKLAELVV 84


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.317    0.135    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 889,921,894
Number of extensions: 32553884
Number of successful extensions: 83887
Number of sequences better than 10.0: 209
Number of HSP's gapped: 84522
Number of HSP's successfully gapped: 209
Length of query: 101
Length of database: 4,236,830,644
Length adjustment: 70
Effective length of query: 31
Effective length of database: 3,361,280,164
Effective search space: 104199685084
Effective search space used: 104199685084
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)