BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_1930 (502 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QTQ8|A0QTQ8_MYCS2 Tax_Id=246196 SubName: Full=DEAD/DEAH box... 833 0.0 tr|A1T613|A1T613_MYCVP Tax_Id=350058 SubName: Full=DEAD/DEAH box... 661 0.0 tr|Q1BC79|Q1BC79_MYCSS Tax_Id=164756 SubName: Full=DEAD/DEAH box... 659 0.0 tr|A1UCR5|A1UCR5_MYCSK Tax_Id=189918 SubName: Full=DEAD/DEAH box... 659 0.0 tr|A3PWH1|A3PWH1_MYCSJ Tax_Id=164757 SubName: Full=DEAD/DEAH box... 658 0.0 tr|A4TFD7|A4TFD7_MYCGI Tax_Id=350054 SubName: Full=DEAD/DEAH box... 654 0.0 tr|Q73UQ4|Q73UQ4_MYCPA Tax_Id=1770 (rhlE)SubName: Full=RhlE;[Myc... 630 e-178 tr|B2HEU8|B2HEU8_MYCMM Tax_Id=216594 (rhlE)SubName: Full=ATP-dep... 630 e-178 tr|A0PRA7|A0PRA7_MYCUA Tax_Id=362242 (rhlE)SubName: Full=ATP-dep... 630 e-178 tr|D5PD75|D5PD75_9MYCO Tax_Id=525368 (deaD)SubName: Full=ATP-dep... 625 e-177 tr|O05855|O05855_MYCTU Tax_Id=1773 (rhlE)SubName: Full=ATP-depen... 613 e-173 tr|C6DXF4|C6DXF4_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent... 613 e-173 tr|C1AGY2|C1AGY2_MYCBT Tax_Id=561275 (rhlE)SubName: Full=Putativ... 613 e-173 tr|B1MF01|B1MF01_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-... 613 e-173 tr|A5WSC3|A5WSC3_MYCTF Tax_Id=336982 SubName: Full=ATP-dependent... 613 e-173 tr|A5U7N3|A5U7N3_MYCTA Tax_Id=419947 (rhlE)SubName: Full=ATP-dep... 613 e-173 tr|A1KNL1|A1KNL1_MYCBP Tax_Id=410289 (rhlE)SubName: Full=Probabl... 613 e-173 tr|D6G2L3|D6G2L3_MYCTU Tax_Id=478435 SubName: Full=ATP-dependent... 613 e-173 tr|D6FQX6|D6FQX6_MYCTU Tax_Id=611304 SubName: Full=ATP-dependent... 613 e-173 tr|D6FLB5|D6FLB5_MYCTU Tax_Id=611303 SubName: Full=ATP-dependent... 613 e-173 tr|D6F9K3|D6F9K3_MYCTU Tax_Id=611302 SubName: Full=ATP-dependent... 613 e-173 tr|D5ZL87|D5ZL87_MYCTU Tax_Id=537210 SubName: Full=ATP-dependent... 613 e-173 tr|D5YWG1|D5YWG1_MYCTU Tax_Id=515616 SubName: Full=ATP-dependent... 613 e-173 tr|D5YJH6|D5YJH6_MYCTU Tax_Id=520140 SubName: Full=ATP-dependent... 613 e-173 tr|D5Y8D9|D5Y8D9_MYCTU Tax_Id=520141 SubName: Full=ATP-dependent... 613 e-173 tr|A4KLB0|A4KLB0_MYCTU Tax_Id=395095 SubName: Full=ATP-dependent... 613 e-173 tr|A2VP09|A2VP09_MYCTU Tax_Id=348776 SubName: Full=ATP-dependent... 613 e-173 tr|Q9CCH3|Q9CCH3_MYCLE Tax_Id=1769 (rhlE)SubName: Full=Putative ... 612 e-173 tr|Q7TX01|Q7TX01_MYCBO Tax_Id=1765 (rhlE)SubName: Full=PROBABLE ... 612 e-173 tr|B8ZQH2|B8ZQH2_MYCLB Tax_Id=561304 (rhlE)SubName: Full=Putativ... 612 e-173 tr|C1B1G9|C1B1G9_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-... 593 e-167 tr|D5PQG0|D5PQG0_COREQ Tax_Id=525370 (deaD)SubName: Full=ATP-dep... 591 e-167 tr|Q0S2V3|Q0S2V3_RHOSR Tax_Id=101510 SubName: Full=Probable cold... 586 e-165 tr|Q5YQW7|Q5YQW7_NOCFA Tax_Id=37329 SubName: Full=Putative ATP-d... 580 e-163 tr|D5UVG0|D5UVG0_TSUPA Tax_Id=521096 SubName: Full=DEAD/DEAH box... 552 e-155 tr|C6WM51|C6WM51_ACTMD Tax_Id=446462 SubName: Full=DEAD/DEAH box... 551 e-154 tr|D0LF13|D0LF13_GORB4 Tax_Id=526226 SubName: Full=DEAD/DEAH box... 549 e-154 tr|C0ZX20|C0ZX20_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-... 542 e-152 tr|C3JKW4|C3JKW4_RHOER Tax_Id=596309 SubName: Full=Dead/deah box... 539 e-151 tr|C7MVL7|C7MVL7_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helic... 527 e-147 tr|A4F8L7|A4F8L7_SACEN Tax_Id=405948 (rhlE)SubName: Full=Putativ... 519 e-145 tr|C8XJ80|C8XJ80_NAKMY Tax_Id=479431 SubName: Full=DEAD/DEAH box... 511 e-143 tr|D5UI21|D5UI21_9CELL Tax_Id=446466 SubName: Full=DEAD/DEAH box... 499 e-139 tr|D2SFG2|D2SFG2_GEOOG Tax_Id=526225 SubName: Full=DEAD/DEAH box... 487 e-135 tr|Q2J6D3|Q2J6D3_FRASC Tax_Id=106370 SubName: Full=DEAD/DEAH box... 485 e-135 >tr|A0QTQ8|A0QTQ8_MYCS2 Tax_Id=246196 SubName: Full=DEAD/DEAH box helicase;[Mycobacterium smegmatis] Length = 502 Score = 833 bits (2152), Expect = 0.0 Identities = 432/502 (86%), Positives = 432/502 (86%) Query: 1 MTQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAF 60 MTQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAF Sbjct: 1 MTQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAF 60 Query: 61 GVPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIY 120 GVPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIY Sbjct: 61 GVPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIY 120 Query: 121 GGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDI 180 GGRPYEPQIEALRKGVDVVVGTPGR DEADEMLDLGFLPDI Sbjct: 121 GGRPYEPQIEALRKGVDVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDI 180 Query: 181 ERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAH 240 ERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAH Sbjct: 181 ERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAH 240 Query: 241 ALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKAL 300 ALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKAL Sbjct: 241 ALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKAL 300 Query: 301 KSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITL 360 KSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITL Sbjct: 301 KSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITL 360 Query: 361 VDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDE 420 VDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDE Sbjct: 361 VDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDE 420 Query: 421 DEHRISSADRPAXXXXXXXXXXXGGKPLTGXXXXXXXXXXXXXXXXXXDTXXXXXXXXXX 480 DEHRISSADRPA GGKPLTG DT Sbjct: 421 DEHRISSADRPARTRTRSRRRTRGGKPLTGHPESHPEAHPESASAAPEDTEAAPAGESEA 480 Query: 481 XXQTTXXXXXXXXXKTEAATAG 502 QTT KTEAATAG Sbjct: 481 GEQTTRRRRRRRPRKTEAATAG 502 >tr|A1T613|A1T613_MYCVP Tax_Id=350058 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium vanbaalenii] Length = 494 Score = 661 bits (1706), Expect = 0.0 Identities = 328/423 (77%), Positives = 364/423 (86%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T + +FA+LGVRDEIVRALAENGIEH FAIQELTLPLALAGDDLIGQARTGMGKT+AFG Sbjct: 6 THPSPTFAQLGVRDEIVRALAENGIEHAFAIQELTLPLALAGDDLIGQARTGMGKTFAFG 65 Query: 62 VPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYG 121 VPLLHR+++D RPLTG PRAL+VVPTRELC+QVY DL GA+K+L ++ RK TVT+IYG Sbjct: 66 VPLLHRITTDTERPLTGIPRALIVVPTRELCIQVYEDLVGASKYLMADETRKLTVTAIYG 125 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GRPYEPQIEAL+KGVDVVVGTPGR DEADEMLDLGFLPDIE Sbjct: 126 GRPYEPQIEALQKGVDVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIE 185 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHA 241 RIL+ P RQAMLFSATMPDPIITLARTFM QPTHIRAEAPHS+ATHD+T Q+AYRAHA Sbjct: 186 RILKQIPAKRQAMLFSATMPDPIITLARTFMTQPTHIRAEAPHSSATHDSTEQFAYRAHA 245 Query: 242 LDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALK 301 LDKVE+V+RILQA GRGATM+FTRTKRTAQKV+DEL ERGFKVGAVHGDLGQ AREKALK Sbjct: 246 LDKVEMVARILQAEGRGATMIFTRTKRTAQKVADELGERGFKVGAVHGDLGQAAREKALK 305 Query: 302 SFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLV 361 SFRTGE+DVLVATDVAARGIDIDD+THVIN+Q PEDEQAYVHRIGRTGRAGKTG+A+TLV Sbjct: 306 SFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGIAVTLV 365 Query: 362 DWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDED 421 DWDEL RW MIDKAL L PDPAETYS+SPHLYE+L+IP +A G++G+P + A K E Sbjct: 366 DWDELPRWSMIDKALGLDTPDPAETYSNSPHLYEELNIPAEAGGSIGRPKRTADKEPREP 425 Query: 422 EHR 424 R Sbjct: 426 RER 428 >tr|Q1BC79|Q1BC79_MYCSS Tax_Id=164756 SubName: Full=DEAD/DEAH box helicase-like protein;[Mycobacterium sp.] Length = 507 Score = 659 bits (1701), Expect = 0.0 Identities = 339/455 (74%), Positives = 373/455 (81%), Gaps = 7/455 (1%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T ++ +FA LGVRDEI RALAE GI PFAIQELTLP+ALAGDDLIGQARTGMGKTYAFG Sbjct: 6 TSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFG 65 Query: 62 VPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYG 121 VPLL RV++D + L+G PRAL+VVPTRELCLQV++DL+ AAK+L D RK +V SIYG Sbjct: 66 VPLLQRVTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGD-RKLSVVSIYG 124 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GRPYEPQIE+LRKG DVVVGTPGR DEADEMLDLGFLPDIE Sbjct: 125 GRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIE 184 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHA 241 RIL+ TPD+RQAMLFSATMPDPIITLARTFMNQPTHIRAE+P S+ATHDTTAQ+AYRAHA Sbjct: 185 RILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAYRAHA 244 Query: 242 LDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALK 301 LDKVE+VSRILQA GRGATM+FTRTKRTAQKV+DELAERGFKVGAVHGDLGQGAREKALK Sbjct: 245 LDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALK 304 Query: 302 SFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLV 361 SFRTGE+DVLVATDVAARGIDIDD+THVIN+Q PEDEQAYVHRIGRTGRAGKTGVA+TLV Sbjct: 305 SFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVAVTLV 364 Query: 362 DWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRAT------ 415 DWDEL RW MIDKAL L PDPAETYSSSPHLYE+L IPT+A G+VG+P RA Sbjct: 365 DWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARAAAKRSER 424 Query: 416 KASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 A E + D+PA GKP+TG Sbjct: 425 PARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTG 459 >tr|A1UCR5|A1UCR5_MYCSK Tax_Id=189918 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium sp.] Length = 507 Score = 659 bits (1701), Expect = 0.0 Identities = 339/455 (74%), Positives = 373/455 (81%), Gaps = 7/455 (1%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T ++ +FA LGVRDEI RALAE GI PFAIQELTLP+ALAGDDLIGQARTGMGKTYAFG Sbjct: 6 TSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFG 65 Query: 62 VPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYG 121 VPLL RV++D + L+G PRAL+VVPTRELCLQV++DL+ AAK+L D RK +V SIYG Sbjct: 66 VPLLQRVTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGD-RKLSVVSIYG 124 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GRPYEPQIE+LRKG DVVVGTPGR DEADEMLDLGFLPDIE Sbjct: 125 GRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIE 184 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHA 241 RIL+ TPD+RQAMLFSATMPDPIITLARTFMNQPTHIRAE+P S+ATHDTTAQ+AYRAHA Sbjct: 185 RILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAYRAHA 244 Query: 242 LDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALK 301 LDKVE+VSRILQA GRGATM+FTRTKRTAQKV+DELAERGFKVGAVHGDLGQGAREKALK Sbjct: 245 LDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALK 304 Query: 302 SFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLV 361 SFRTGE+DVLVATDVAARGIDIDD+THVIN+Q PEDEQAYVHRIGRTGRAGKTGVA+TLV Sbjct: 305 SFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVAVTLV 364 Query: 362 DWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRAT------ 415 DWDEL RW MIDKAL L PDPAETYSSSPHLYE+L IPT+A G+VG+P RA Sbjct: 365 DWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARAAAKRSER 424 Query: 416 KASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 A E + D+PA GKP+TG Sbjct: 425 PARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTG 459 >tr|A3PWH1|A3PWH1_MYCSJ Tax_Id=164757 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium sp.] Length = 507 Score = 658 bits (1698), Expect = 0.0 Identities = 339/455 (74%), Positives = 373/455 (81%), Gaps = 7/455 (1%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T ++ +FA LGVRDEI RALAE GI PFAIQELTLP+ALAGDDLIGQARTGMGKTYAFG Sbjct: 6 TPVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFG 65 Query: 62 VPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYG 121 VPLL RV++D + L+G PRAL+VVPTRELCLQV++DL+ AAK+L D RK +V SIYG Sbjct: 66 VPLLQRVTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGD-RKLSVVSIYG 124 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GRPYEPQIE+LRKG DVVVGTPGR DEADEMLDLGFLPDIE Sbjct: 125 GRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIE 184 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHA 241 RIL+ TPD+RQAMLFSATMPDPIITLARTFMNQPTHIRAE+P S+ATHDTTAQ+AYRAHA Sbjct: 185 RILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAYRAHA 244 Query: 242 LDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALK 301 LDKVE+VSRILQA GRGATM+FTRTKRTAQKV+DELAERGFKVGAVHGDLGQGAREKALK Sbjct: 245 LDKVEMVSRILQADGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALK 304 Query: 302 SFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLV 361 SFRTGE+DVLVATDVAARGIDIDD+THVIN+Q PEDEQAYVHRIGRTGRAGKTGVA+TLV Sbjct: 305 SFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVAVTLV 364 Query: 362 DWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRAT------ 415 DWDEL RW MIDKAL L PDPAETYSSSPHLYE+L IPT+A G+VG+P RA Sbjct: 365 DWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARAAAKRSER 424 Query: 416 KASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 A E + D+PA GKP+TG Sbjct: 425 PARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTG 459 >tr|A4TFD7|A4TFD7_MYCGI Tax_Id=350054 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium gilvum] Length = 505 Score = 654 bits (1687), Expect = 0.0 Identities = 329/431 (76%), Positives = 365/431 (84%), Gaps = 2/431 (0%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T N +FA+LGVRDEIVRALAENGIEH FAIQELTLPLALAGDDLIGQARTGMGKT+AFG Sbjct: 6 THPNPTFAQLGVRDEIVRALAENGIEHAFAIQELTLPLALAGDDLIGQARTGMGKTFAFG 65 Query: 62 VPLLHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYG 121 VPLLHR+++D RPLTG PRALVVVPTRELC+QVY DL A+K+L +D RK TVT+IYG Sbjct: 66 VPLLHRITTDTERPLTGIPRALVVVPTRELCIQVYEDLVHASKYLMADDTRKLTVTAIYG 125 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GRPYEPQIEAL+KGVDVVVGTPGR DEADEMLDLGFLPDIE Sbjct: 126 GRPYEPQIEALQKGVDVVVGTPGRLLDLAQQGHLQLGGLNVLVLDEADEMLDLGFLPDIE 185 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHA 241 RIL+ P RQAMLFSATMPDPIITLARTFM QPTHIRAE +ATHDTT Q+AYRAHA Sbjct: 186 RILKQIPAKRQAMLFSATMPDPIITLARTFMTQPTHIRAEGVQGSATHDTTEQFAYRAHA 245 Query: 242 LDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALK 301 LDKVE+V+RILQA GRGATM+FTRTKRTAQKV+DEL ERGF+VGAVHGDLGQ AREKALK Sbjct: 246 LDKVEMVARILQAEGRGATMIFTRTKRTAQKVADELGERGFRVGAVHGDLGQSAREKALK 305 Query: 302 SFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLV 361 FR G++DVLVATDVAARGIDIDD+THVIN+Q PEDEQAYVHRIGRTGRAGKTG+A+TLV Sbjct: 306 GFRNGDVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGIAVTLV 365 Query: 362 DWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDED 421 DWDEL RW MIDKAL L PDPAETYS+SPHLY++L+IPT+A G++GKPA+ A K + Sbjct: 366 DWDELPRWSMIDKALGLDTPDPAETYSNSPHLYDELNIPTEAGGSIGKPARSADK--PKR 423 Query: 422 EHRISSADRPA 432 E R A+RPA Sbjct: 424 EPREPRAERPA 434 >tr|Q73UQ4|Q73UQ4_MYCPA Tax_Id=1770 (rhlE)SubName: Full=RhlE;[Mycobacterium paratuberculosis] Length = 505 Score = 630 bits (1625), Expect = e-178 Identities = 328/451 (72%), Positives = 362/451 (80%), Gaps = 10/451 (2%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FA+LGVRDEIVRAL E GI+HPFAIQELTLPLALAGDDLIGQARTGMGKT+AFGVPLL Sbjct: 11 TFAQLGVRDEIVRALDEKGIQHPFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPLLQ 70 Query: 67 RVSSDEN-RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRPY 125 R+++ R L G PRALVVVPTRELCLQV +DL AAKHL + GR +V IYGGRPY Sbjct: 71 RITAGTAPRALNGTPRALVVVPTRELCLQVTDDLTLAAKHLTADGGRPLSVVPIYGGRPY 130 Query: 126 EPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERILQ 185 EPQI+ALR G DVVVGTPGR DEADEMLDLGFLPDIERIL+ Sbjct: 131 EPQIDALRAGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILR 190 Query: 186 LTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDKV 245 PD RQ+MLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTT QY YRAHALDKV Sbjct: 191 QIPDDRQSMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTVQYVYRAHALDKV 250 Query: 246 ELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRT 305 ELVSR+LQA RGATM+FTRTKRTAQKV+DELAERGFKVGAVHGDLGQ AREKALK+FRT Sbjct: 251 ELVSRVLQAESRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQVAREKALKAFRT 310 Query: 306 GEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDE 365 G+IDVLVATDVAARGIDIDDVTHVINYQ PEDEQAYVHRIGRTGRAGK GVA+TLVDWDE Sbjct: 311 GDIDVLVATDVAARGIDIDDVTHVINYQIPEDEQAYVHRIGRTGRAGKAGVAVTLVDWDE 370 Query: 366 LARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGK------PAKRATKASD 419 LARW +IDKAL L P+PAETYS+SPHLYE+L IP A G VG P + A +A+ Sbjct: 371 LARWALIDKALGLDVPEPAETYSNSPHLYEELGIPAGAGGRVGAARKPQGPRRSAERATG 430 Query: 420 EDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 + + + +A R + GG+P++G Sbjct: 431 KPDQKSETATRRS---GTRRRRTRGGQPVSG 458 >tr|B2HEU8|B2HEU8_MYCMM Tax_Id=216594 (rhlE)SubName: Full=ATP-dependent RNA helicase RhlE;[Mycobacterium marinum] Length = 517 Score = 630 bits (1625), Expect = e-178 Identities = 332/451 (73%), Positives = 359/451 (79%), Gaps = 7/451 (1%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FAELGVRDEIVRAL E IE PFAIQELTLPLALAGDDLIGQARTGMGKT+AFGVPLL Sbjct: 14 TFAELGVRDEIVRALGERDIECPFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPLLQ 73 Query: 67 RVSSDEN-RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDGRKFTVTSIYG 121 RVSS RPLTGAPRALVVVPTRELCLQV DLA AAK+L T D R +V SIYG Sbjct: 74 RVSSGTGVRPLTGAPRALVVVPTRELCLQVTEDLAVAAKYLTATTETGDQRPLSVVSIYG 133 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GR YEPQIEALR G DVVVGTPGR DEADEMLDLGFLPDIE Sbjct: 134 GRAYEPQIEALRAGADVVVGTPGRLLDLSQQGHLQLGGLSVLVLDEADEMLDLGFLPDIE 193 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHA 241 RIL+ P RQ+MLFSATMPDPIITLARTFM QPTHIRAEAPHS A HDTT Q+ YRAHA Sbjct: 194 RILRQIPADRQSMLFSATMPDPIITLARTFMIQPTHIRAEAPHSLAVHDTTEQFVYRAHA 253 Query: 242 LDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALK 301 LDKVELV+R+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAVHGDLGQ AREKALK Sbjct: 254 LDKVELVTRVLQARERGATMIFTRTKRTAQKVADELNERGFAVGAVHGDLGQVAREKALK 313 Query: 302 SFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLV 361 SFR+G ++VLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TGVA+TLV Sbjct: 314 SFRSGSVNVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLV 373 Query: 362 DWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATK--ASD 419 DWDEL RW MIDKAL LG+PDPAETYSSSPHLY +L IPTDA GTVG P+K +K ++ Sbjct: 374 DWDELPRWTMIDKALGLGSPDPAETYSSSPHLYTELSIPTDAAGTVGPPSKSGSKPRTTE 433 Query: 420 EDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 + + + A GGKP+TG Sbjct: 434 KQDDQQGEKSGRARSDAGRRRRTRGGKPVTG 464 >tr|A0PRA7|A0PRA7_MYCUA Tax_Id=362242 (rhlE)SubName: Full=ATP-dependent RNA helicase RhlE;[Mycobacterium ulcerans] Length = 517 Score = 630 bits (1624), Expect = e-178 Identities = 332/451 (73%), Positives = 358/451 (79%), Gaps = 7/451 (1%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FAELGVRDEIVRAL E IE PFAIQELTLPLALAGDDLIGQARTGMGKT+AFGVPLL Sbjct: 14 TFAELGVRDEIVRALGERDIEGPFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPLLQ 73 Query: 67 RVSSDEN-RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDGRKFTVTSIYG 121 RVSS RPLTGAPRALVVVPTRELCLQV DLA AAK+L T D R +V SIYG Sbjct: 74 RVSSGTGVRPLTGAPRALVVVPTRELCLQVTEDLAVAAKYLTATTETGDQRPLSVVSIYG 133 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GR YEPQIEALR G DVVVGTPGR DEADEMLDLGFLPDIE Sbjct: 134 GRAYEPQIEALRAGADVVVGTPGRLLDLSQQGHLQLGGLYVLVLDEADEMLDLGFLPDIE 193 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHA 241 RIL+ P RQ+MLFSATMPDPIITLARTFM QPTHIRAEAPHS A HDTT Q+ YRAHA Sbjct: 194 RILRQIPADRQSMLFSATMPDPIITLARTFMIQPTHIRAEAPHSLAVHDTTEQFVYRAHA 253 Query: 242 LDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALK 301 LDKVELV+R+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAVHGDLGQ AREKALK Sbjct: 254 LDKVELVTRVLQARERGATMIFTRTKRTAQKVADELNERGFAVGAVHGDLGQVAREKALK 313 Query: 302 SFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLV 361 SFR G ++VLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TGVA+TLV Sbjct: 314 SFRRGSVNVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLV 373 Query: 362 DWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATK--ASD 419 DWDEL RW MIDKAL LG+PDPAETYSSSPHLY +L IPTDA GTVG P+K +K ++ Sbjct: 374 DWDELPRWTMIDKALGLGSPDPAETYSSSPHLYTELSIPTDAAGTVGPPSKSGSKPRTTE 433 Query: 420 EDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 + + + A GGKP+TG Sbjct: 434 KQDDQQGEKSGRARSDAGRRRRTRGGKPVTG 464 >tr|D5PD75|D5PD75_9MYCO Tax_Id=525368 (deaD)SubName: Full=ATP-dependent RNA helicase DeaD; Flags: Fragment;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 443 Score = 625 bits (1613), Expect = e-177 Identities = 317/407 (77%), Positives = 344/407 (84%), Gaps = 1/407 (0%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FA LGVRDEIVRALAE GIE PFAIQELTLPLALAGDDLIGQARTGMGKT AFGVPLL+ Sbjct: 11 TFANLGVRDEIVRALAEKGIERPFAIQELTLPLALAGDDLIGQARTGMGKTLAFGVPLLN 70 Query: 67 RVSSDEN-RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRPY 125 R+++ R L G PRALVVVPTRELCLQV+ DL+ AAK+L R +V SIYGGRPY Sbjct: 71 RITAGVGVRALNGTPRALVVVPTRELCLQVHGDLSDAAKYLKAEGDRPLSVVSIYGGRPY 130 Query: 126 EPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERILQ 185 EPQIEALR G DVVVGTPGR DEADEMLDLGFLPDIERIL+ Sbjct: 131 EPQIEALRAGADVVVGTPGRLLDLSQQGHLQLGGLSMLVLDEADEMLDLGFLPDIERILR 190 Query: 186 LTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDKV 245 P+ RQ+MLFSATMP PIITLARTFMNQPTHIRAEAPHSAATHDTT Q+ YRAHALDKV Sbjct: 191 QIPEERQSMLFSATMPGPIITLARTFMNQPTHIRAEAPHSAATHDTTEQFVYRAHALDKV 250 Query: 246 ELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRT 305 E+VSRILQA GRGATM+FTRTKRTAQKV+DELAERGFKVGAVHGDLGQ AREKALK+FR Sbjct: 251 EMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQIAREKALKAFRN 310 Query: 306 GEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDE 365 G+IDVLVATDVAARGIDIDD+THVINYQ PEDEQAYVHRIGRTGRAGKTG+A+TLVDWDE Sbjct: 311 GDIDVLVATDVAARGIDIDDITHVINYQIPEDEQAYVHRIGRTGRAGKTGIAVTLVDWDE 370 Query: 366 LARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAK 412 L RW MIDKAL L +PDPAETYS+SPHLYE++ IP +A G +G P K Sbjct: 371 LPRWSMIDKALGLDSPDPAETYSNSPHLYEEMGIPAEAGGAIGTPKK 417 >tr|O05855|O05855_MYCTU Tax_Id=1773 (rhlE)SubName: Full=ATP-dependent RNA helicase DeaD; SubName: Full=PROBABLE ATP-DEPENDENT RNA HELICASE RHLE;[Mycobacterium tuberculosis] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|C6DXF4|C6DXF4_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|C1AGY2|C1AGY2_MYCBT Tax_Id=561275 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Mycobacterium bovis] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|B1MF01|B1MF01_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-dependent DEAD-box RNA helicase;[Mycobacterium abscessus] Length = 490 Score = 613 bits (1582), Expect = e-173 Identities = 308/413 (74%), Positives = 349/413 (84%), Gaps = 5/413 (1%) Query: 1 MTQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAF 60 M+ + H+FA+LGVR EI RAL E GIEHPFAIQELTLPLALAG DLIGQARTGMGKTYAF Sbjct: 1 MSHIEHTFAQLGVRKEIARALREAGIEHPFAIQELTLPLALAGSDLIGQARTGMGKTYAF 60 Query: 61 GVPLLHRVSSD-ENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSI 119 GVPLLHR+++ E+RPL G PRALVVVPTRELC+QVY DL A+K+L D R FTV SI Sbjct: 61 GVPLLHRIATGVEDRPLNGTPRALVVVPTRELCIQVYEDLTKASKYLSAGD-RDFTVVSI 119 Query: 120 YGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPD 179 YGGRPYEPQIEALR G DVVVGTPGR DEADEMLDLGFLPD Sbjct: 120 YGGRPYEPQIEALRAGADVVVGTPGRLLDLAQQGHLQLGGLAMLVLDEADEMLDLGFLPD 179 Query: 180 IERILQLTPDS---RQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYA 236 IERIL L P + RQ+MLFSATMPDPIITLARTFMN+PTHIRAE P +++ HD+T Q+ Sbjct: 180 IERILALAPSADAGRQSMLFSATMPDPIITLARTFMNRPTHIRAEDPQASSVHDSTEQFV 239 Query: 237 YRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAR 296 YRAHALDK+ELVSRILQA GRGATM+FTRTKRTAQKVSDELAERGF VGAVHGDLGQ AR Sbjct: 240 YRAHALDKIELVSRILQADGRGATMIFTRTKRTAQKVSDELAERGFAVGAVHGDLGQIAR 299 Query: 297 EKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGV 356 EKAL SFR+G+I+VLVATDVAARGIDIDDVTHVINYQCPED++ YVHRIGRTGRAG+TG+ Sbjct: 300 EKALTSFRSGQINVLVATDVAARGIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGRTGI 359 Query: 357 AITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGK 409 A+TLVDWD++ARW++IDKAL LG P+P ETYS+SPHL+ +L+IP D TG++G+ Sbjct: 360 AVTLVDWDDIARWQLIDKALGLGVPEPDETYSTSPHLFTELNIPADVTGSIGE 412 >tr|A5WSC3|A5WSC3_MYCTF Tax_Id=336982 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|A5U7N3|A5U7N3_MYCTA Tax_Id=419947 (rhlE)SubName: Full=ATP-dependent RNA helicase RhlE;[Mycobacterium tuberculosis] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|A1KNL1|A1KNL1_MYCBP Tax_Id=410289 (rhlE)SubName: Full=Probable ATP-dependent RNA helicase rhlE;[Mycobacterium bovis] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D6G2L3|D6G2L3_MYCTU Tax_Id=478435 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis KZN 605] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D6FQX6|D6FQX6_MYCTU Tax_Id=611304 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis K85] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D6FLB5|D6FLB5_MYCTU Tax_Id=611303 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis CPHL_A] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D6F9K3|D6F9K3_MYCTU Tax_Id=611302 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis T46] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D5ZL87|D5ZL87_MYCTU Tax_Id=537210 SubName: Full=ATP-dependent RNA helicase rhlE; Flags: Fragment;[Mycobacterium tuberculosis T17] Length = 489 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D5YWG1|D5YWG1_MYCTU Tax_Id=515616 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis 02_1987] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D5YJH6|D5YJH6_MYCTU Tax_Id=520140 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis EAS054] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|D5Y8D9|D5Y8D9_MYCTU Tax_Id=520141 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis T85] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|A4KLB0|A4KLB0_MYCTU Tax_Id=395095 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis str. Haarlem] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|A2VP09|A2VP09_MYCTU Tax_Id=348776 SubName: Full=ATP-dependent RNA helicase rhlE;[Mycobacterium tuberculosis C] Length = 527 Score = 613 bits (1582), Expect = e-173 Identities = 327/463 (70%), Positives = 360/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LGVRDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|Q9CCH3|Q9CCH3_MYCLE Tax_Id=1769 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Mycobacterium leprae] Length = 544 Score = 612 bits (1578), Expect = e-173 Identities = 319/452 (70%), Positives = 358/452 (79%), Gaps = 8/452 (1%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FA+LGVRDEIVRALAE GI+ PFAIQELTLPLALAGDD+IGQARTGMGKT+AFGVPLL Sbjct: 33 AFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLLQ 92 Query: 67 RVS-SDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTND-GRKFTVTSIYGGRP 124 R+S + RPL+GAPR LVVVPTRELCLQV +DLA AK+L +D R+F+V SIYGGR Sbjct: 93 RISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSIYGGRA 152 Query: 125 YEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERIL 184 YEPQIEAL+ G DVVV TPGR DEADEMLDLGF PDIER+L Sbjct: 153 YEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPDIERLL 212 Query: 185 QLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDK 244 P RQ+MLFSATMPDPIITLARTFM+QP HIRAEAPHS A HDTT Q+ YRAHALDK Sbjct: 213 GQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRAHALDK 272 Query: 245 VELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFR 304 VEL+SRILQARGRGATM+FTRTKRTAQKV++EL ERGF VGAVHGDLGQ ARE AL++FR Sbjct: 273 VELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEAFR 332 Query: 305 TGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWD 364 TG +DVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TGVA+TLVDWD Sbjct: 333 TGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWD 392 Query: 365 ELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATK--ASDEDE 422 EL RWE IDKAL LG PDPAETYS+SPHLY +L IP +A+GTVG P K K +D D Sbjct: 393 ELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKRRKTDRDG 452 Query: 423 HRISSADRPA----XXXXXXXXXXXGGKPLTG 450 + ++ + A GG+P+TG Sbjct: 453 DKSGTSAQAAKAARTSNSVQRHRIRGGQPVTG 484 >tr|Q7TX01|Q7TX01_MYCBO Tax_Id=1765 (rhlE)SubName: Full=PROBABLE ATP-DEPENDENT RNA HELICASE RHLE;[Mycobacterium bovis] Length = 527 Score = 612 bits (1578), Expect = e-173 Identities = 326/463 (70%), Positives = 359/463 (77%), Gaps = 15/463 (3%) Query: 1 MTQLNHS----FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGK 56 MT + H+ FA+LG RDEIVRAL E GI+ PFAIQELTLPLAL G+D+IGQARTGMGK Sbjct: 1 MTAVKHTTESTFAKLGARDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK 60 Query: 57 TYAFGVPLLHRVSS-DENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLP----TNDG 111 T+AFGVPLL R++S D RPLTGAPRALVVVPTRELCLQV +DLA A K+L T+D Sbjct: 61 TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA 120 Query: 112 ----RKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDE 167 R+ +V SIYGGRPYEPQIEALR G DVVVGTPGR DE Sbjct: 121 AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE 180 Query: 168 ADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA 227 ADEMLDLGFLPDIERIL+ P RQ+MLFSATMPDPIITLARTFM +PTHIRAEAPHS+A Sbjct: 181 ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA 240 Query: 228 THDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAV 287 HD T Q+ YRAHALDKVELVSR+LQAR RGATM+FTRTKRTAQKV+DEL ERGF VGAV Sbjct: 241 VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV 300 Query: 288 HGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGR 347 HGDLGQ AREKALK+FRTG IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGR Sbjct: 301 HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR 360 Query: 348 TGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTV 407 TGRAG+TGVA+TLVDWDEL RW MID+AL LG+PDPAETYS+SPHLY +L IP A GTV Sbjct: 361 TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV 420 Query: 408 GKPAKRATKASDEDEHRISSADRPAXXXXXXXXXXXGGKPLTG 450 G K + D D +A GGKP+TG Sbjct: 421 GPARKSQGRRRDTDCDGQKTAQH--ARNTPRRRRTRGGKPVTG 461 >tr|B8ZQH2|B8ZQH2_MYCLB Tax_Id=561304 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Mycobacterium leprae] Length = 544 Score = 612 bits (1578), Expect = e-173 Identities = 319/452 (70%), Positives = 358/452 (79%), Gaps = 8/452 (1%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FA+LGVRDEIVRALAE GI+ PFAIQELTLPLALAGDD+IGQARTGMGKT+AFGVPLL Sbjct: 33 AFAKLGVRDEIVRALAERGIQQPFAIQELTLPLALAGDDVIGQARTGMGKTFAFGVPLLQ 92 Query: 67 RVS-SDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTND-GRKFTVTSIYGGRP 124 R+S + RPL+GAPR LVVVPTRELCLQV +DLA AK+L +D R+F+V SIYGGR Sbjct: 93 RISVTTTARPLSGAPRGLVVVPTRELCLQVADDLATVAKYLTADDDNRRFSVVSIYGGRA 152 Query: 125 YEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERIL 184 YEPQIEAL+ G DVVV TPGR DEADEMLDLGF PDIER+L Sbjct: 153 YEPQIEALQTGADVVVSTPGRLLDLCQQGHLQLSGLSVLVLDEADEMLDLGFFPDIERLL 212 Query: 185 QLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDK 244 P RQ+MLFSATMPDPIITLARTFM+QP HIRAEAPHS A HDTT Q+ YRAHALDK Sbjct: 213 GQIPTDRQSMLFSATMPDPIITLARTFMDQPIHIRAEAPHSLAVHDTTQQFVYRAHALDK 272 Query: 245 VELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFR 304 VEL+SRILQARGRGATM+FTRTKRTAQKV++EL ERGF VGAVHGDLGQ ARE AL++FR Sbjct: 273 VELISRILQARGRGATMIFTRTKRTAQKVTNELNERGFAVGAVHGDLGQIARENALEAFR 332 Query: 305 TGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWD 364 TG +DVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TGVA+TLVDWD Sbjct: 333 TGNVDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWD 392 Query: 365 ELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATK--ASDEDE 422 EL RWE IDKAL LG PDPAETYS+SPHLY +L IP +A+GTVG P K K +D D Sbjct: 393 ELHRWETIDKALGLGTPDPAETYSNSPHLYTELAIPAEASGTVGTPRKAQVKRRKTDRDG 452 Query: 423 HRISSADRPA----XXXXXXXXXXXGGKPLTG 450 + ++ + A GG+P+TG Sbjct: 453 DKSGTSAQAAKAARTSNSVQRHRIRGGQPVTG 484 >tr|C1B1G9|C1B1G9_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-dependent RNA helicase; EC=3.6.1.-;[Rhodococcus opacus] Length = 534 Score = 593 bits (1529), Expect = e-167 Identities = 303/439 (69%), Positives = 343/439 (78%), Gaps = 8/439 (1%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T + +FAELGVRDE+VRAL E GIE FAIQELTLPLALAGDDLIGQARTGMGKT+ FG Sbjct: 34 THVAPTFAELGVRDEVVRALDEIGIERTFAIQELTLPLALAGDDLIGQARTGMGKTFGFG 93 Query: 62 VPLLHRVSSDEN--RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSI 119 VPLLHR+SS L G PRALV+VPTRELC+QV DL GAAK+L + V +I Sbjct: 94 VPLLHRISSGTTGTAALDGTPRALVIVPTRELCIQVTKDLEGAAKYLKGEKNKPLEVLAI 153 Query: 120 YGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPD 179 YGGRPYE QI L+KG DVVVGTPGR DEADEMLDLGFLPD Sbjct: 154 YGGRPYETQIATLQKGADVVVGTPGRLLDLANQGHLILGKVEVLVLDEADEMLDLGFLPD 213 Query: 180 IERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRA 239 IERIL + PD RQ MLFSATMP PIITLARTF+ QPTHIRAE +A HD T+Q+ YRA Sbjct: 214 IERILNMVPDKRQTMLFSATMPGPIITLARTFLTQPTHIRAEQADDSAVHDRTSQHIYRA 273 Query: 240 HALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKA 299 HALDK E+V+R+LQA GRGATM+FTRTKRTAQKVSDELAERGF VG+VHGDL Q AREKA Sbjct: 274 HALDKAEMVARVLQADGRGATMIFTRTKRTAQKVSDELAERGFAVGSVHGDLNQVAREKA 333 Query: 300 LKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAIT 359 LK+FR+G+IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TG+A+T Sbjct: 334 LKAFRSGKIDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVT 393 Query: 360 LVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKP-AKRATKAS 418 LVDWD++ RW++IDKAL LG PDP ETYSSSPHLYE+L IP +ATGT+ +P ++A A Sbjct: 394 LVDWDDIPRWQLIDKALGLGIPDPVETYSSSPHLYEELSIPAEATGTIKRPRVEKAAPAQ 453 Query: 419 DEDE-----HRISSADRPA 432 ED + +RPA Sbjct: 454 SEDADTENGEKAERTERPA 472 >tr|D5PQG0|D5PQG0_COREQ Tax_Id=525370 (deaD)SubName: Full=ATP-dependent RNA helicase DeaD;[Rhodococcus equi ATCC 33707] Length = 545 Score = 591 bits (1524), Expect = e-167 Identities = 301/413 (72%), Positives = 340/413 (82%), Gaps = 4/413 (0%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +F ELGVRDEIV+ALAE GIE FAIQELTLPLALAGDDLIGQARTGMGKT+ FG+PLLH Sbjct: 42 TFGELGVRDEIVKALAEIGIERTFAIQELTLPLALAGDDLIGQARTGMGKTFGFGIPLLH 101 Query: 67 RVSSDEN--RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRP 124 RVS+ ++ PL G PRALV+VPTRELC+QV DL A+K+L + + +K V SIYGGRP Sbjct: 102 RVSTADSGTTPLDGTPRALVIVPTRELCVQVTQDLENASKYLKSGE-KKLEVLSIYGGRP 160 Query: 125 YEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERIL 184 YE QI+ALRKGVDVVVGTPGR DEADEMLDLGFLPDIERIL Sbjct: 161 YEQQIDALRKGVDVVVGTPGRLLDLANQGHLILGKVGVLVLDEADEMLDLGFLPDIERIL 220 Query: 185 QLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDK 244 + PD RQ MLFSATMP PIITLARTF+ QPTHIRAE S+A H+ T Q+ YRAHALDK Sbjct: 221 GMVPDKRQTMLFSATMPGPIITLARTFLTQPTHIRAEEADSSAVHERTTQHIYRAHALDK 280 Query: 245 VELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFR 304 E+V+R+LQA GRGATM+FTRTKRTAQKV+D+L ERGF VGAVHGDLGQ AREKAL FR Sbjct: 281 AEMVARVLQADGRGATMIFTRTKRTAQKVADDLNERGFNVGAVHGDLGQIAREKALAGFR 340 Query: 305 TGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWD 364 +G++DVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TG+AITLVDWD Sbjct: 341 SGKVDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAITLVDWD 400 Query: 365 ELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKP-AKRATK 416 ++ RW++IDKAL LG PDP ETYSSSPHLYEDL IPTDA G++ KP A+R K Sbjct: 401 DVPRWQLIDKALALGVPDPVETYSSSPHLYEDLGIPTDAKGSIRKPRAERPAK 453 >tr|Q0S2V3|Q0S2V3_RHOSR Tax_Id=101510 SubName: Full=Probable cold-shock DEAD-box protein;[Rhodococcus sp.] Length = 555 Score = 586 bits (1511), Expect = e-165 Identities = 299/422 (70%), Positives = 338/422 (80%), Gaps = 4/422 (0%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T + +FAELGVRDEIVRAL E GIE FAIQELTLPLALAGDDLIGQARTGMGKT+ FG Sbjct: 34 THVAPTFAELGVRDEIVRALDEIGIERTFAIQELTLPLALAGDDLIGQARTGMGKTFGFG 93 Query: 62 VPLLHRVSSDEN--RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSI 119 VPLLHR+SS L G PRALV+VPTRELC+QV DL GAAK+L + K V +I Sbjct: 94 VPLLHRISSGTTGTAALDGTPRALVIVPTRELCIQVTKDLEGAAKYLK-GEKNKLEVLAI 152 Query: 120 YGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPD 179 YGGRPYE QI L+KG DVVVGTPGR DEADEMLDLGFLPD Sbjct: 153 YGGRPYETQIATLQKGADVVVGTPGRLLDLANQGHLILGKVEVLVLDEADEMLDLGFLPD 212 Query: 180 IERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRA 239 IERIL + PD RQ MLFSATMP PIITLARTF+ QPTHIRAE +A HD T+Q+ YRA Sbjct: 213 IERILGMVPDKRQTMLFSATMPGPIITLARTFLTQPTHIRAEQADDSAVHDRTSQHIYRA 272 Query: 240 HALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKA 299 HALDK E+V+R+LQA GRGATM+FTRTKRTAQKV+D+LAERGF VG+VHGDL Q AREKA Sbjct: 273 HALDKAEMVARVLQAEGRGATMIFTRTKRTAQKVADDLAERGFSVGSVHGDLNQVAREKA 332 Query: 300 LKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAIT 359 LK+FRTG+IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TG+A+T Sbjct: 333 LKAFRTGKIDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGIAVT 392 Query: 360 LVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKP-AKRATKAS 418 LVDWD++ RW++IDKAL LG PDPAETYSSSPHL+E+L IP TGT+ +P ++A K + Sbjct: 393 LVDWDDIPRWQLIDKALGLGIPDPAETYSSSPHLFEELSIPAGTTGTIKRPRVEKAEKVA 452 Query: 419 DE 420 E Sbjct: 453 PE 454 >tr|Q5YQW7|Q5YQW7_NOCFA Tax_Id=37329 SubName: Full=Putative ATP-dependent RNA helicase;[Nocardia farcinica] Length = 1148 Score = 580 bits (1495), Expect = e-163 Identities = 301/428 (70%), Positives = 337/428 (78%), Gaps = 10/428 (2%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FAELGVRDEIVRALAE GIE FAIQELTLPLALAG+DLIGQARTGMGKT+ FGVPLLH Sbjct: 36 TFAELGVRDEIVRALAEIGIERTFAIQELTLPLALAGEDLIGQARTGMGKTFGFGVPLLH 95 Query: 67 RVSSDEN--RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRP 124 R+++ ++ PL G PRALV+VPTRELC+QV +DL A K+L + G VT+IYGGRP Sbjct: 96 RIATADSGTTPLDGTPRALVIVPTRELCIQVTDDLVRAGKYLRNHKGA-LKVTAIYGGRP 154 Query: 125 YEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERIL 184 Y+ QI ALR+GVDVVVGTPGR DEADEMLDLGFLPDIERIL Sbjct: 155 YDSQIAALREGVDVVVGTPGRLLDLAKQNHLILGKIGVLVLDEADEMLDLGFLPDIERIL 214 Query: 185 QLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDK 244 + P RQ MLFSATMP PIITLARTF+ +PTHIRAE PH +A HD TAQ+ YRAHALDK Sbjct: 215 TMVPAKRQTMLFSATMPGPIITLARTFLTRPTHIRAEEPHDSAVHDRTAQFVYRAHALDK 274 Query: 245 VELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFR 304 EL++R+LQA GRGATM+FTRTKRTAQKV+D+LAERGF VGAVHGDLGQ REKAL FR Sbjct: 275 AELIARVLQAEGRGATMIFTRTKRTAQKVADDLAERGFAVGAVHGDLGQVQREKALDKFR 334 Query: 305 TGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWD 364 G IDVLVATDVAARGIDIDDVTHVINYQCPEDE+ YVHRIGRTGRAG+TGVA+TL+DWD Sbjct: 335 KGVIDVLVATDVAARGIDIDDVTHVINYQCPEDEKTYVHRIGRTGRAGRTGVAVTLIDWD 394 Query: 365 ELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDEDEHR 424 EL RW ID AL LG P+P ETYS SPHL+ DL IP TGTV +RA A DE Sbjct: 395 ELNRWAAIDAALGLGIPEPVETYSRSPHLFSDLGIPEGVTGTV----RRAAPARTADE-- 448 Query: 425 ISSADRPA 432 + A+RPA Sbjct: 449 -TVAERPA 455 >tr|D5UVG0|D5UVG0_TSUPA Tax_Id=521096 SubName: Full=DEAD/DEAH box helicase domain protein;[Tsukamurella paurometabola DSM 20162] Length = 536 Score = 552 bits (1422), Expect = e-155 Identities = 289/419 (68%), Positives = 319/419 (76%), Gaps = 11/419 (2%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 SFAELGV IV AL + GIE FAIQELTLPLALAG+DLIGQARTGMGKTY FGVPLL Sbjct: 37 SFAELGVDQGIVDALGKRGIERTFAIQELTLPLALAGNDLIGQARTGMGKTYGFGVPLLD 96 Query: 67 R--------VSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHL---PTNDGRKFT 115 R V D R L G PRAL++VPTRELC+QV +DLA A+ + T R Sbjct: 97 RLVTQARADVGEDGLRALDGTPRALIIVPTRELCVQVTDDLAQASDGVRVQTTKGERDLK 156 Query: 116 VTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLG 175 +TSIYGGRPYE QIEAL+KGVDVVVGTPGR DEADEMLDLG Sbjct: 157 ITSIYGGRPYEAQIEALQKGVDVVVGTPGRLLDLANQGHLVLGKIQILVLDEADEMLDLG 216 Query: 176 FLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQY 235 FLPDIERIL + P RQ MLFSATMP PIITLARTF+ QPTH+RAE +A H+ T QY Sbjct: 217 FLPDIERILTMVPTDRQTMLFSATMPGPIITLARTFLKQPTHVRAEHHDDSAVHERTTQY 276 Query: 236 AYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGA 295 YRAHALDK ELV+++LQA+GRGATM+FTRTKRTAQKV+DEL ERGFKVGAVHGDLGQ A Sbjct: 277 VYRAHALDKTELVAKVLQAQGRGATMIFTRTKRTAQKVADELGERGFKVGAVHGDLGQVA 336 Query: 296 REKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTG 355 REKAL FR G IDVLVATDVAARGIDIDDVTHVIN+QCPED++ YVHRIGRTGRAGKTG Sbjct: 337 REKALGKFRDGSIDVLVATDVAARGIDIDDVTHVINFQCPEDDKTYVHRIGRTGRAGKTG 396 Query: 356 VAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRA 414 A+TLVDWDEL RWE+IDKAL LG P+P ETYSSS HL+ DL I G++ KRA Sbjct: 397 TAVTLVDWDELHRWELIDKALGLGKPEPVETYSSSEHLFTDLGIDPKVKGSLPGVRKRA 455 >tr|C6WM51|C6WM51_ACTMD Tax_Id=446462 SubName: Full=DEAD/DEAH box helicase domain protein;[Actinosynnema mirum] Length = 609 Score = 551 bits (1419), Expect = e-154 Identities = 279/426 (65%), Positives = 327/426 (76%), Gaps = 10/426 (2%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +F ELGVR+EIVRAL E GIE FAIQELTLPLALAG+D+IGQARTG GKT FG+PLL Sbjct: 53 TFTELGVREEIVRALGEAGIERAFAIQELTLPLALAGEDVIGQARTGTGKTLGFGIPLLQ 112 Query: 67 RVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRPYE 126 RV + P G P+ALVVVPTRELCLQV +DL A+KH+ V +IYGGRPYE Sbjct: 113 RVIT----PGDGTPQALVVVPTRELCLQVTHDLTDASKHMDVR------VLAIYGGRPYE 162 Query: 127 PQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERILQL 186 PQI ALRKGVDVVVGTPGR DEADEMLDLGFLPDIER+L++ Sbjct: 163 PQIAALRKGVDVVVGTPGRLLDLAEQRHLVLGKVRSLVLDEADEMLDLGFLPDIERVLRM 222 Query: 187 TPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDKVE 246 PD RQ MLFSATMP PIITLARTF+NQPTH+RAE + A H+ T Q+ YRAHALDKVE Sbjct: 223 VPDERQTMLFSATMPGPIITLARTFLNQPTHVRAEENDAGAVHERTEQFIYRAHALDKVE 282 Query: 247 LVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRTG 306 L++R+LQAR RG +M+FTRTKRTAQKV+D++AERGF V AVHGDLGQGARE+AL++FR+G Sbjct: 283 LLARVLQARDRGLSMIFTRTKRTAQKVADDMAERGFAVAAVHGDLGQGAREQALRAFRSG 342 Query: 307 EIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDEL 366 +IDVLVATDVAARGID++ VTHV+NYQCPEDE+ YVHRIGRTGRAG+TGVA+TLVDWDE+ Sbjct: 343 KIDVLVATDVAARGIDVEGVTHVVNYQCPEDEKTYVHRIGRTGRAGRTGVAVTLVDWDEI 402 Query: 367 ARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDEDEHRIS 426 RW+MI ALNLG DP ETYS+S HL+ +L IP +TG + + E E + Sbjct: 403 PRWQMISDALNLGKRDPVETYSTSDHLFAELGIPAGSTGRLPLGLRTRAGLDAEPEENLK 462 Query: 427 SADRPA 432 +PA Sbjct: 463 GDKKPA 468 >tr|D0LF13|D0LF13_GORB4 Tax_Id=526226 SubName: Full=DEAD/DEAH box helicase domain protein;[Gordonia bronchialis] Length = 543 Score = 549 bits (1415), Expect = e-154 Identities = 287/429 (66%), Positives = 326/429 (75%), Gaps = 8/429 (1%) Query: 2 TQLNHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFG 61 T + +FAELGV D IV ALA++G H FAIQELTLPLA+ GDDLIGQARTGMGKT+ FG Sbjct: 21 THSSPTFAELGVDDRIVAALADDGKTHTFAIQELTLPLAMGGDDLIGQARTGMGKTFGFG 80 Query: 62 VPLLHRVSSDEN---RPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPT---NDG--RK 113 VPLLHR++ E R L PRAL++VPTRELC+QV DL AAK L DG R Sbjct: 81 VPLLHRLAHAEESGLRALDNTPRALIIVPTRELCIQVTGDLEVAAKKLTDITLADGTVRP 140 Query: 114 FTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLD 173 +TSIYGGRPYE QI LR GVDVVVGTPGR DEADEMLD Sbjct: 141 LKITSIYGGRPYESQIADLRAGVDVVVGTPGRLLDLAQQGHLILGKVAVLVLDEADEMLD 200 Query: 174 LGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTA 233 LGFLPDIERI+ P RQ MLFSATMP PI+TLARTF+++PTHIRAE +A H+ T Sbjct: 201 LGFLPDIERIMSALPTPRQTMLFSATMPGPIVTLARTFLHRPTHIRAEHADDSAIHERTT 260 Query: 234 QYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQ 293 QY YRAHALDK ELV+RILQA GRGATM+FTRTKRTAQKV+D+LAERGFKVGAVHGDLGQ Sbjct: 261 QYVYRAHALDKAELVARILQAEGRGATMIFTRTKRTAQKVADDLAERGFKVGAVHGDLGQ 320 Query: 294 GAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGK 353 AREKALK FR G IDVLVATDVAARGIDIDDVTHVINYQ PED++ YVHRIGRTGRAG+ Sbjct: 321 VAREKALKRFRDGTIDVLVATDVAARGIDIDDVTHVINYQIPEDDKNYVHRIGRTGRAGR 380 Query: 354 TGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKR 413 TG+A+TLVDWDEL RWE+I+ AL LG P+PAETYS+S HL DL IP TG + P + Sbjct: 381 TGIAVTLVDWDELHRWELINNALGLGIPEPAETYSTSEHLRTDLSIPESTTGRIVAPKRE 440 Query: 414 ATKASDEDE 422 +++ ++ E Sbjct: 441 SSEKTERVE 449 >tr|C0ZX20|C0ZX20_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-dependent RNA helicase; EC=3.6.1.-;[Rhodococcus erythropolis] Length = 474 Score = 542 bits (1397), Expect = e-152 Identities = 274/395 (69%), Positives = 313/395 (79%), Gaps = 4/395 (1%) Query: 39 LALAGDDLIGQARTGMGKTYAFGVPLLHRVSSDENRP--LTGAPRALVVVPTRELCLQVY 96 +ALAGDDLIGQARTGMGKT+ FGVPLLHR+ + EN L G PRAL++VPTRELC+QV Sbjct: 1 MALAGDDLIGQARTGMGKTFGFGVPLLHRIVTAENGTAVLDGTPRALIIVPTRELCIQVA 60 Query: 97 NDLAGAAKHLPTNDGRKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXX 156 DL A+K+L D R V IYGGRPYE QI AL+KGVDVVVGTPGR Sbjct: 61 RDLENASKYLRVGD-RGLQVLPIYGGRPYEAQISALQKGVDVVVGTPGRLLDLANQSHLI 119 Query: 157 XXXXXXXXXDEADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPT 216 DEADEMLDLGFLPDIER++ + PD RQ MLFSATMP PIITLARTF+ QPT Sbjct: 120 LGKVGVLVLDEADEMLDLGFLPDIERLMGMVPDKRQTMLFSATMPGPIITLARTFLTQPT 179 Query: 217 HIRAEAPHSAATHDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDE 276 HIRAE S+A HD T+Q+ YRAHALDK E+V+R+LQA GRGATM+FTRTKRTAQKV+D+ Sbjct: 180 HIRAEEAESSAVHDRTSQHIYRAHALDKAEMVARVLQAEGRGATMIFTRTKRTAQKVADD 239 Query: 277 LAERGFKVGAVHGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPE 336 LAERGF VGAVHGDLGQ AREKALK FR G++DVLVATDVAARGIDIDDVTHVINYQCPE Sbjct: 240 LAERGFSVGAVHGDLGQIAREKALKGFRNGKVDVLVATDVAARGIDIDDVTHVINYQCPE 299 Query: 337 DEQAYVHRIGRTGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYED 396 DE+ YVHRIGRTGRAG+TG+A+TLVDWD++ RW++IDKAL+LG PDP ETYSSSPHLYE+ Sbjct: 300 DEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALSLGIPDPVETYSSSPHLYEE 359 Query: 397 LDIPTDATGTVGKPAKRATKASDEDEHRISSADRP 431 L IP DA GTV + AK A + + D+ AD P Sbjct: 360 LSIPADAKGTV-RRAKAAPEKAATDKAATDKADAP 393 >tr|C3JKW4|C3JKW4_RHOER Tax_Id=596309 SubName: Full=Dead/deah box helicase; Flags: Fragment;[Rhodococcus erythropolis SK121] Length = 385 Score = 539 bits (1389), Expect = e-151 Identities = 270/384 (70%), Positives = 307/384 (79%), Gaps = 3/384 (0%) Query: 39 LALAGDDLIGQARTGMGKTYAFGVPLLHRVSSDENRP--LTGAPRALVVVPTRELCLQVY 96 +ALAGDDLIGQARTGMGKT+ FGVPLLHR+ + EN L G PRAL++VPTRELC+QV Sbjct: 1 MALAGDDLIGQARTGMGKTFGFGVPLLHRIVTAENGTAVLDGTPRALIIVPTRELCIQVA 60 Query: 97 NDLAGAAKHLPTNDGRKFTVTSIYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXX 156 DL A+K+L D R V IYGGRPYE QI AL+KGVDVVVGTPGR Sbjct: 61 RDLENASKYLRVGD-RGLQVLPIYGGRPYEAQISALQKGVDVVVGTPGRLLDLANQSHLI 119 Query: 157 XXXXXXXXXDEADEMLDLGFLPDIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPT 216 DEADEMLDLGFLPDIER++ + PD RQ MLFSATMP PIITLARTF+ QPT Sbjct: 120 LGKVGVLVLDEADEMLDLGFLPDIERLMGMVPDKRQTMLFSATMPGPIITLARTFLTQPT 179 Query: 217 HIRAEAPHSAATHDTTAQYAYRAHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDE 276 HIRAE S+A HD T+Q+ YRAHALDK E+V+R+LQA GRGATM+FTRTKRTAQKV+D+ Sbjct: 180 HIRAEEAESSAVHDRTSQHIYRAHALDKAEMVARVLQAEGRGATMIFTRTKRTAQKVADD 239 Query: 277 LAERGFKVGAVHGDLGQGAREKALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPE 336 LAERGF VGAVHGDLGQ AREKALK FR G++DVLVATDVAARGIDIDDVTHVINYQCPE Sbjct: 240 LAERGFSVGAVHGDLGQIAREKALKGFRNGKVDVLVATDVAARGIDIDDVTHVINYQCPE 299 Query: 337 DEQAYVHRIGRTGRAGKTGVAITLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYED 396 DE+ YVHRIGRTGRAG+TG+A+TLVDWD++ RW++IDKAL+LG PDP ETYSSSPHLYE+ Sbjct: 300 DEKTYVHRIGRTGRAGRTGIAVTLVDWDDIPRWQLIDKALSLGIPDPVETYSSSPHLYEE 359 Query: 397 LDIPTDATGTVGKPAKRATKASDE 420 L IP DA GTV K KA+ + Sbjct: 360 LSIPADAKGTVRKAKAAPEKAATD 383 >tr|C7MVL7|C7MVL7_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helicase, superfamily II;[Saccharomonospora viridis] Length = 559 Score = 527 bits (1357), Expect = e-147 Identities = 268/420 (63%), Positives = 320/420 (76%), Gaps = 12/420 (2%) Query: 5 NHSFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPL 64 N +FA+LGV +IVRAL+E+GIE F IQ LTLPLAL G+D+IGQARTG GKT FGVPL Sbjct: 22 NPTFADLGVHPDIVRALSESGIERTFDIQALTLPLALRGEDVIGQARTGTGKTLGFGVPL 81 Query: 65 LHRVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRP 124 L R+ + P G P+ALVVVPTRELCLQV DLA A K+L +TSIYGGRP Sbjct: 82 LQRLVT----PGDGTPQALVVVPTRELCLQVSQDLAEAGKYLGVR------ITSIYGGRP 131 Query: 125 YEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERIL 184 YE QI++LR GVDVV+GTPGR DEADEMLDLGFLPDIERIL Sbjct: 132 YESQIQSLRSGVDVVIGTPGRLLDLAEQRNLVLGKISTLVLDEADEMLDLGFLPDIERIL 191 Query: 185 QLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDK 244 ++ P+ RQ MLFSATMP PI+TLARTF+ QPTHIRAEA + A H+ T Q+ YRAH+LDK Sbjct: 192 RMVPEDRQTMLFSATMPGPILTLARTFLRQPTHIRAEAGETGAIHERTTQFVYRAHSLDK 251 Query: 245 VELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFR 304 EL++++LQA GRG TM+FTRTKRTAQKV+D+L ERGF AVHGDLGQGARE+AL++FR Sbjct: 252 PELIAKVLQAEGRGLTMIFTRTKRTAQKVADDLVERGFAAAAVHGDLGQGAREQALRAFR 311 Query: 305 TGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWD 364 +G++D+LVATDVAARGID++ VTHVINYQ PEDE+ YVHRIGRTGRAG+TGVAITLVDWD Sbjct: 312 SGKVDILVATDVAARGIDVEGVTHVINYQMPEDEKTYVHRIGRTGRAGRTGVAITLVDWD 371 Query: 365 ELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATG--TVGKPAKRATKASDEDE 422 E+ RW++I L L P+P ETYS+S HL+ DL IP DATG + K + A DE++ Sbjct: 372 EVPRWKLISDELGLDMPEPVETYSTSKHLFTDLGIPEDATGRLPLSKRTRAGLAAEDEED 431 >tr|A4F8L7|A4F8L7_SACEN Tax_Id=405948 (rhlE)SubName: Full=Putative ATP-dependent RNA helicase;[Saccharopolyspora erythraea] Length = 496 Score = 519 bits (1337), Expect = e-145 Identities = 266/414 (64%), Positives = 308/414 (74%), Gaps = 17/414 (4%) Query: 16 EIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLHRVSSDENRP 75 EIVRAL E GIEH FAIQELTLPLAL G+DLIGQARTG GKT FGVP+LHR+ P Sbjct: 4 EIVRALGEAGIEHTFAIQELTLPLALRGEDLIGQARTGTGKTLGFGVPVLHRLQV----P 59 Query: 76 LTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRPYEPQIEALRKG 135 G P+ALVVVPTRELC+QV DL A KHL ++YGGRPYE QIEALR G Sbjct: 60 GDGTPQALVVVPTRELCVQVARDLTDAGKHLGIR------TLAVYGGRPYEQQIEALRSG 113 Query: 136 VDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERILQLTPDSRQAML 195 VD+V+GTPGR DEADEMLDLGFLPDIERIL + P+ RQ ML Sbjct: 114 VDLVIGTPGRLLDLAEQQHLVLGKVRALVLDEADEMLDLGFLPDIERILHMVPEQRQTML 173 Query: 196 FSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDKVELVSRILQAR 255 FSATMP PIITLARTF+ QPTHIRAE + A H+ T Q+ YRAHA+DK EL++R +QA Sbjct: 174 FSATMPGPIITLARTFLRQPTHIRAEQADAGAIHERTKQFVYRAHAMDKTELIARAMQAN 233 Query: 256 GRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRTGEIDVLVATD 315 GRG +M+FTRTKRTAQK+SDEL ERGF AVHGDLGQGARE+AL++FR+G++D+LVATD Sbjct: 234 GRGLSMIFTRTKRTAQKLSDELTERGFAAAAVHGDLGQGAREQALRAFRSGKVDILVATD 293 Query: 316 VAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDELARWEMIDKA 375 VAARGID+ VTHV+N QCP+DE+ YVHRIGRTGRAG+ GVAITLVDWDE RW+MI Sbjct: 294 VAARGIDVGGVTHVVNLQCPDDEKTYVHRIGRTGRAGREGVAITLVDWDEEPRWKMISDT 353 Query: 376 LNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKAS-----DEDEHR 424 L L P+P ETYS+S HL+ DLDIP+DATG + P + T+A DED R Sbjct: 354 LGLDKPEPVETYSTSAHLFADLDIPSDATGRL--PLSKRTRAGLAAEPDEDAKR 405 >tr|C8XJ80|C8XJ80_NAKMY Tax_Id=479431 SubName: Full=DEAD/DEAH box helicase domain protein;[Nakamurella multipartita] Length = 586 Score = 511 bits (1317), Expect = e-143 Identities = 258/414 (62%), Positives = 312/414 (75%), Gaps = 14/414 (3%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FAE GV + IV ALA+ GIE FAIQ LTLP+AL G DLIGQARTGMGKT FGVPLL Sbjct: 46 TFAEFGVDERIVTALADVGIERTFAIQALTLPIALTGSDLIGQARTGMGKTLGFGVPLLQ 105 Query: 67 RVSSDE--------NRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTS 118 R+S D+ P+ APRA+V+VPTRELC+QV DL K L VT+ Sbjct: 106 RLSHDKAVTVDEKGKLPVGRAPRAVVMVPTRELCVQVTRDLHALGKALG------LAVTA 159 Query: 119 IYGGRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLP 178 +YGGR YEPQI+AL+ GVD+VVGTPGR DEADEMLDLGFLP Sbjct: 160 VYGGRAYEPQIKALQAGVDLVVGTPGRLLDLANSGHLVLGGVKVLVLDEADEMLDLGFLP 219 Query: 179 DIERILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYR 238 D+E++L L P +Q MLFSATMP PI+TLARTFM++P HIRAEA A H TT Q+ YR Sbjct: 220 DMEKVLDLVPTVKQTMLFSATMPGPILTLARTFMSRPMHIRAEAAAEGAMHSTTRQFVYR 279 Query: 239 AHALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREK 298 AHALDKVE+++R+LQARGRG TMVFTRTKRTA KV+++L ERGF AVHGDLGQGARE+ Sbjct: 280 AHALDKVEMLARVLQARGRGLTMVFTRTKRTAAKVAEDLEERGFAAAAVHGDLGQGAREQ 339 Query: 299 ALKSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAI 358 AL++FR G++DVLVATDVAARGID+DDVTHVIN+QCPE+E+ YVHRIGRTGRAGKTG A+ Sbjct: 340 ALRAFRAGKVDVLVATDVAARGIDVDDVTHVINFQCPEEEKTYVHRIGRTGRAGKTGTAV 399 Query: 359 TLVDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAK 412 + +DWD++ RW++I++AL L DP ETYS+SPHL+ +LDIP TG + + A+ Sbjct: 400 SFIDWDDIPRWQLINQALELNFNDPVETYSTSPHLFAELDIPEGTTGELPRAAR 453 >tr|D5UI21|D5UI21_9CELL Tax_Id=446466 SubName: Full=DEAD/DEAH box helicase domain protein;[Cellulomonas flavigena DSM 20109] Length = 598 Score = 499 bits (1285), Expect = e-139 Identities = 256/422 (60%), Positives = 307/422 (72%), Gaps = 14/422 (3%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 SFA+ VR EIV ALA GI PF IQ +TLP+AL+G D+IGQA+TG GKT FGVPLLH Sbjct: 49 SFADFDVRPEIVAALAAAGITQPFPIQAMTLPVALSGHDIIGQAKTGTGKTLGFGVPLLH 108 Query: 67 RVSSD-----ENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYG 121 RV + + P G P+ALVVVPTREL +QV DLA A+ GRK + +YG Sbjct: 109 RVIAPGEDGYDRLPAPGEPQALVVVPTRELAVQVAGDLAMAST------GRKVRIVQVYG 162 Query: 122 GRPYEPQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIE 181 GR YEPQ+EAL++G DVVVGTPGR DEADEMLDLGFLPD+E Sbjct: 163 GRAYEPQVEALQRGADVVVGTPGRMIDLLNQRHLRLKHATEVVLDEADEMLDLGFLPDVE 222 Query: 182 RILQLTPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAA-THDTTAQYAYRAH 240 ++L TP +R MLFSATMP ++ +AR +M+QPTHIRA AP T Q AYRAH Sbjct: 223 KLLAATPPNRHTMLFSATMPGAVVAMARRYMSQPTHIRASAPDDEGQTVKNIKQVAYRAH 282 Query: 241 ALDKVELVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKAL 300 ALDKVEL++RILQARGRG T+VF RTKRTA KV+DEL ERGF GA+HGDLGQGARE+AL Sbjct: 283 ALDKVELLARILQARGRGLTIVFARTKRTAAKVADELVERGFAAGAIHGDLGQGAREQAL 342 Query: 301 KSFRTGEIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITL 360 ++FR G++DVLVATDVAARGID++DVTHV+NYQCPEDE+ Y+HR GRTGRAG G A+T Sbjct: 343 RAFRHGKVDVLVATDVAARGIDVEDVTHVVNYQCPEDEKTYLHRTGRTGRAGNKGTAVTF 402 Query: 361 VDWDELARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDE 420 VDWD++ RW +IDKAL LG P+P ETYSSSPH+ EDLD+P TG + P + T+A + Sbjct: 403 VDWDDIPRWGLIDKALGLGIPEPVETYSSSPHVREDLDVPEGVTGRL--PKSQQTRAGLD 460 Query: 421 DE 422 E Sbjct: 461 AE 462 >tr|D2SFG2|D2SFG2_GEOOG Tax_Id=526225 SubName: Full=DEAD/DEAH box helicase domain protein;[Geodermatophilus obscurus] Length = 611 Score = 487 bits (1253), Expect = e-135 Identities = 250/398 (62%), Positives = 293/398 (73%), Gaps = 7/398 (1%) Query: 8 FAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLHR 67 F++ V ++V ALAE GI FAIQELTLPLALAG+DLIGQARTG GKT FGVP+L R Sbjct: 110 FSDFDVHPDVVAALAEAGITRTFAIQELTLPLALAGNDLIGQARTGTGKTLGFGVPMLQR 169 Query: 68 VSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRPYEP 127 V G P+ALVVVPTRELC+QV DLA A R V +IYGGR +EP Sbjct: 170 VVPPAEGG-DGVPQALVVVPTRELCVQVSRDLATAGSK------RGIRVQAIYGGRAFEP 222 Query: 128 QIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERILQLT 187 Q+ AL+ GV++VVGTPGR DEADEMLDLGFLPDIERIL + Sbjct: 223 QVAALQAGVEIVVGTPGRLLDLAQRGDLILGKVKVLVLDEADEMLDLGFLPDIERILAMV 282 Query: 188 PDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDKVEL 247 PD RQ MLFSATMP PI+TL+R+FM QPTHIRA +T T Q+ YRAH LDK EL Sbjct: 283 PDKRQTMLFSATMPGPIVTLSRSFMTQPTHIRAHGNDEGSTVPQTTQFIYRAHNLDKPEL 342 Query: 248 VSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRTGE 307 +SR+LQAR R MVF RTKRTAQKV+DEL ERGF AVHGDLGQGARE+AL++FR+G+ Sbjct: 343 LSRVLQARDRSLVMVFCRTKRTAQKVADELVERGFAAAAVHGDLGQGAREQALRAFRSGK 402 Query: 308 IDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDELA 367 +DVLVATDVAARGID+ V+HV+NYQCPEDE+ Y+HRIGRTGRAG GVA+TLVDWD++ Sbjct: 403 VDVLVATDVAARGIDVTGVSHVVNYQCPEDEKTYLHRIGRTGRAGSEGVAVTLVDWDDIP 462 Query: 368 RWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATG 405 RW++I+KAL L DP ETYS+SP +Y DLD+P ATG Sbjct: 463 RWQLINKALELDFTDPPETYSTSPWVYSDLDVPEGATG 500 >tr|Q2J6D3|Q2J6D3_FRASC Tax_Id=106370 SubName: Full=DEAD/DEAH box helicase-like;[Frankia sp.] Length = 649 Score = 485 bits (1248), Expect = e-135 Identities = 251/424 (59%), Positives = 303/424 (71%), Gaps = 7/424 (1%) Query: 7 SFAELGVRDEIVRALAENGIEHPFAIQELTLPLALAGDDLIGQARTGMGKTYAFGVPLLH 66 +FAELGVR E V AL E GI H F IQELTLPLALA +D+IGQARTG GKT AFGVP++ Sbjct: 86 TFAELGVRAETVSALTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKTLAFGVPVVQ 145 Query: 67 RVSSDENRPLTGAPRALVVVPTRELCLQVYNDLAGAAKHLPTNDGRKFTVTSIYGGRPYE 126 V + + G P+ALVVVPTRELC+QV D+ A R V S+YGGR YE Sbjct: 146 TVLAAKEGA-DGRPQALVVVPTRELCVQVTADVTRAGAR------RGLRVLSVYGGRAYE 198 Query: 127 PQIEALRKGVDVVVGTPGRXXXXXXXXXXXXXXXXXXXXDEADEMLDLGFLPDIERILQL 186 PQ+ ALR GVD+VVGTPGR DEADEMLDLGFLPD+ERI+ Sbjct: 199 PQLSALRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLDLGFLPDVERIMSQ 258 Query: 187 TPDSRQAMLFSATMPDPIITLARTFMNQPTHIRAEAPHSAATHDTTAQYAYRAHALDKVE 246 P RQ MLFSATMP P+I+LAR FM +P H+RAE P T TT Q+ +RAHALDK+E Sbjct: 259 LPTERQTMLFSATMPGPVISLARRFMKRPVHVRAEQPDEGRTVPTTRQHVFRAHALDKME 318 Query: 247 LVSRILQARGRGATMVFTRTKRTAQKVSDELAERGFKVGAVHGDLGQGAREKALKSFRTG 306 +++R+LQA GRG MVF RT+RTA KV+++LA+RGF AVHGDLGQG RE+AL++FR+G Sbjct: 319 VLARVLQAGGRGLAMVFVRTRRTADKVAEDLAKRGFAAAAVHGDLGQGQREQALRAFRSG 378 Query: 307 EIDVLVATDVAARGIDIDDVTHVINYQCPEDEQAYVHRIGRTGRAGKTGVAITLVDWDEL 366 ++DVLVATDVAARGIDI+ VTHV+NYQCPEDE Y+HRIGRTGRAG++GVAIT VDWD+L Sbjct: 379 KVDVLVATDVAARGIDINGVTHVVNYQCPEDENVYLHRIGRTGRAGESGVAITFVDWDDL 438 Query: 367 ARWEMIDKALNLGNPDPAETYSSSPHLYEDLDIPTDATGTVGKPAKRATKASDEDEHRIS 426 RW +++KAL L P ETYS+SPHLYE L IP A GT+ A+ + ED + Sbjct: 439 PRWTLVNKALALPFDGPVETYSTSPHLYEALGIPAGAKGTLPHAARTRAGLAAEDIEDLG 498 Query: 427 SADR 430 + R Sbjct: 499 QSGR 502 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.316 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,527,769,031 Number of extensions: 149070982 Number of successful extensions: 457594 Number of sequences better than 10.0: 26797 Number of HSP's gapped: 411142 Number of HSP's successfully gapped: 28582 Length of query: 502 Length of database: 4,236,830,644 Length adjustment: 142 Effective length of query: 360 Effective length of database: 2,460,713,956 Effective search space: 885857024160 Effective search space used: 885857024160 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 83 (36.6 bits)