BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_1963 (1132 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QTU1|A0QTU1_MYCS2 Tax_Id=246196 SubName: Full=Putative tran... 1969 0.0 tr|Q1BC56|Q1BC56_MYCSS Tax_Id=164756 SubName: Full=Transcription... 1353 0.0 tr|A1UCT8|A1UCT8_MYCSK Tax_Id=189918 SubName: Full=Transcription... 1353 0.0 tr|A3PWJ4|A3PWJ4_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 1352 0.0 tr|A1T637|A1T637_MYCVP Tax_Id=350058 SubName: Full=Transcription... 1331 0.0 tr|A4TFF7|A4TFF7_MYCGI Tax_Id=350054 SubName: Full=Transcription... 1288 0.0 tr|C3JMK7|C3JMK7_RHOER Tax_Id=596309 SubName: Full=Putative tran... 886 0.0 tr|Q0RLB7|Q0RLB7_FRAAA Tax_Id=326424 SubName: Full=Putative unch... 746 0.0 tr|D3CZZ1|D3CZZ1_9ACTO Tax_Id=102897 SubName: Full=Transcription... 713 0.0 tr|A8L6B3|A8L6B3_FRASN Tax_Id=298653 SubName: Full=Transcription... 665 0.0 tr|A8L3H1|A8L3H1_FRASN Tax_Id=298653 SubName: Full=Transcription... 327 8e-87 tr|Q0RLE9|Q0RLE9_FRAAA Tax_Id=326424 SubName: Full=Putative LuxR... 285 3e-74 tr|D2ARR3|D2ARR3_STRRD Tax_Id=479432 SubName: Full=ATPase-like p... 280 1e-72 tr|D1VEW8|D1VEW8_9ACTO Tax_Id=298654 SubName: Full=Transcription... 277 8e-72 tr|C8X748|C8X748_NAKMY Tax_Id=479431 SubName: Full=Transcription... 274 6e-71 tr|D2AZU1|D2AZU1_STRRD Tax_Id=479432 SubName: Full=ATPase-like p... 271 4e-70 tr|D2AU88|D2AU88_STRRD Tax_Id=479432 SubName: Full=ATPase-like p... 259 2e-66 tr|D1S856|D1S856_9ACTO Tax_Id=644283 SubName: Full=Transcription... 255 3e-65 tr|C1ATS5|C1ATS5_RHOOB Tax_Id=632772 SubName: Full=Putative regu... 254 7e-65 tr|Q0S6M7|Q0S6M7_RHOSR Tax_Id=101510 SubName: Full=Probable tran... 252 3e-64 tr|D0L2U0|D0L2U0_GORB4 Tax_Id=526226 SubName: Full=Transcription... 251 6e-64 tr|D3CDG5|D3CDG5_9ACTO Tax_Id=648999 SubName: Full=Transcription... 249 2e-63 tr|C1YMN7|C1YMN7_NOCDA Tax_Id=446468 SubName: Full=DNA-binding t... 247 6e-63 tr|Q5YUG5|Q5YUG5_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 244 7e-62 tr|D2B641|D2B641_STRRD Tax_Id=479432 SubName: Full=ATPase-like p... 241 5e-61 tr|A8L118|A8L118_FRASN Tax_Id=298653 SubName: Full=Transcription... 228 4e-57 tr|D3CVF6|D3CVF6_9ACTO Tax_Id=102897 SubName: Full=Transcription... 214 5e-53 tr|C1IC34|C1IC34_STRCI Tax_Id=249586 (polR)SubName: Full=Pathway... 204 8e-50 tr|C6WRN3|C6WRN3_ACTMD Tax_Id=446462 SubName: Full=Transcription... 186 2e-44 tr|A4FKV5|A4FKV5_SACEN Tax_Id=405948 SubName: Full=Putative unch... 184 9e-44 tr|D1S4M1|D1S4M1_9ACTO Tax_Id=644283 SubName: Full=Transcription... 182 2e-43 tr|D3C4U8|D3C4U8_9ACTO Tax_Id=648999 SubName: Full=Transcription... 182 3e-43 tr|Q0RI37|Q0RI37_FRAAA Tax_Id=326424 SubName: Full=Putative tran... 172 3e-40 tr|A8LVA5|A8LVA5_SALAI Tax_Id=391037 SubName: Full=Transcription... 167 9e-39 tr|C9ZAR3|C9ZAR3_STRSW Tax_Id=680198 SubName: Full=Putative AfsR... 162 2e-37 tr|C6WGN6|C6WGN6_ACTMD Tax_Id=446462 SubName: Full=Transcription... 160 1e-36 tr|D1AAN7|D1AAN7_THECD Tax_Id=471852 SubName: Full=Transcription... 159 2e-36 tr|Q5YQN4|Q5YQN4_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 159 3e-36 tr|D2BBI6|D2BBI6_STRRD Tax_Id=479432 SubName: Full=Transcription... 156 2e-35 tr|D3DBS9|D3DBS9_9ACTO Tax_Id=102897 SubName: Full=Transcription... 156 2e-35 tr|D3PX22|D3PX22_STANL Tax_Id=446470 SubName: Full=Transcription... 152 2e-34 tr|D2AVA9|D2AVA9_STRRD Tax_Id=479432 SubName: Full=ATPase-like p... 152 2e-34 sp|P66799|EMBR_MYCTU Tax_Id=1773 (embR)RecName: Full=Probable re... 152 4e-34 sp|P66800|EMBR_MYCBO Tax_Id=1765 (embR)RecName: Full=Probable re... 152 4e-34 tr|D2B4N8|D2B4N8_STRRD Tax_Id=479432 SubName: Full=Response regu... 152 4e-34 >tr|A0QTU1|A0QTU1_MYCS2 Tax_Id=246196 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium smegmatis] Length = 1132 Score = 1969 bits (5101), Expect = 0.0 Identities = 1016/1132 (89%), Positives = 1016/1132 (89%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA Sbjct: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV Sbjct: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA Sbjct: 121 DALTAADEALALWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT Sbjct: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXXX 300 AILRQAPELAAWPRSPEWTG GAQRGLLIGRKRE Sbjct: 241 AILRQAPELAAWPRSPEWTGAEEVHTPAPPHPPVPEPGAQRGLLIGRKRELAVATDLLAD 300 Query: 301 XXXGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVSCPDERSTPPWWPMRQLVRALGA 360 GETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVSCPDERSTPPWWPMRQLVRALGA Sbjct: 301 VAAGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVSCPDERSTPPWWPMRQLVRALGA 360 Query: 361 DADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLAYIAGA 420 DADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLAYIAGA Sbjct: 361 DADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLAYIAGA 420 Query: 421 LRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISEDVVD 480 LRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISEDVVD Sbjct: 421 LRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISEDVVD 480 Query: 481 HAEAQILAERTGGNPFFVSEYARLPRAERGEIPVAVKSVLDRRLAGLDPGVLAVLRVAAV 540 HAEAQILAERTGGNPFFVSEYARLPRAERGEIPVAVKSVLDRRLAGLDPGVLAVLRVAAV Sbjct: 481 HAEAQILAERTGGNPFFVSEYARLPRAERGEIPVAVKSVLDRRLAGLDPGVLAVLRVAAV 540 Query: 541 IGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHGLLRDHLMAG 600 IGDPIDADVVPVLARVAKI ERIVVNAHTGDGYTFAHGLLRDHLMAG Sbjct: 541 IGDPIDADVVPVLARVAKIDFDTLADHLDAAADERIVVNAHTGDGYTFAHGLLRDHLMAG 600 Query: 601 LPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXXXXXXXTQRW 660 LPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDP TQRW Sbjct: 601 LPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPVEVVAACRLAAEAATQRW 660 Query: 661 SSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLGYVERHLTEA 720 SSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLGYVERHLTEA Sbjct: 661 SSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLGYVERHLTEA 720 Query: 721 LRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXXXXXXXXXXX 780 LRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQR Sbjct: 721 LRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRAAEMAAEHPAAGARVLAAL 780 Query: 781 XXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERSHEIFEWVAR 840 CCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERSHEIFEWVAR Sbjct: 781 GVGCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERSHEIFEWVAR 840 Query: 841 LEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRAQLRWME 900 LEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRAQLRWME Sbjct: 841 LEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRAQLRWME 900 Query: 901 AVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVPAGFGVTPAD 960 AVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVPAGFGVTPAD Sbjct: 901 AVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVPAGFGVTPAD 960 Query: 961 VERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQIWTNLGEAAWMAHLAVDYG 1020 VERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQIWTNLGEAAWMAHLAVDYG Sbjct: 961 VERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQIWTNLGEAAWMAHLAVDYG 1020 Query: 1021 LGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARALEDLAKAEDVAR 1080 LGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARALEDLAKAEDVAR Sbjct: 1021 LGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARALEDLAKAEDVAR 1080 Query: 1081 RTGARPTLMRCALLACEXXXXXXXXXXXXXXXXXXXXXXXXHGIAAQARSLS 1132 RTGARPTLMRCALLACE HGIAAQARSLS Sbjct: 1081 RTGARPTLMRCALLACELAEDGAARRQAAAKLAADAEAMGMHGIAAQARSLS 1132 >tr|Q1BC56|Q1BC56_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, SARP family;[Mycobacterium sp.] Length = 1141 Score = 1353 bits (3501), Expect = 0.0 Identities = 713/1109 (64%), Positives = 811/1109 (73%), Gaps = 15/1109 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 MLGPLQV H+ PVDIG+PKQRAVLA+LLLA GRVVSVDRLIDAVWGDD P SATASLQA Sbjct: 1 MLGPLQVTHADCPVDIGSPKQRAVLAVLLLAAGRVVSVDRLIDAVWGDDAPGSATASLQA 60 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 YISNLRRALRD + QVASPIVRQPPGY+L+ VDLA F +GC +A AV+ W Sbjct: 61 YISNLRRALRDAGQS-QVASPIVRQPPGYFLNVEPGQVDLAVFASGCARAVAAVDSGDWD 119 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP L DL DE WV ++AARA LR++C+D RITALL LGRV ALA Sbjct: 120 EALAAADEALAWWRGPLLADLSDESWVADEAARAEHLRADCLDARITALLGLGRVPQALA 179 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 A +LRSA PL+DR CWLHML LYRAGR +ALD YTRHA++LD+ELG+ PG E+RELQT Sbjct: 180 AAAELRSATPLADRGCWLHMLALYRAGRVTDALDVYTRHARLLDDELGVQPGREVRELQT 239 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXX--GAQRGLLIGRKREXXXXXXXX 298 A+LRQAPEL+AWPRSPEWTG G RG LIGR RE Sbjct: 240 AMLRQAPELSAWPRSPEWTGAGAVATPAAPTVEPSVVPAGPSRGALIGRSRELSTAAGVL 299 Query: 299 XXXXXGETRWLVLSGPPGIGKTRLAEEIT-----DGCDAEVVWVSCPDERSTPPWWPMRQ 353 G RWLVLSGP GIGKTRLAEE+ DG D +VWVSCPDER+TPPWWPMRQ Sbjct: 300 SDVAAGAARWLVLSGPAGIGKTRLAEEVAARVVADGGD--MVWVSCPDERATPPWWPMRQ 357 Query: 354 LVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASC 413 LVRALGAD D+VLEVPP ADPDTARF+VYER+Q LLES R VVIDDVQWAD+TSA+C Sbjct: 358 LVRALGADPDDVLEVPPDADPDTARFRVYERIQTLLESAPRTLAVVIDDVQWADTTSAAC 417 Query: 414 LAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQ 473 LAYIAGALRDHPVA++LTVRD +H+AEV+RL+ TVARGD NRH+A+ +LST+DVAALANQ Sbjct: 418 LAYIAGALRDHPVALILTVRDGEHSAEVSRLVTTVARGDRNRHVAVPALSTEDVAALANQ 477 Query: 474 ISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAER--GEIPVAVKSVLDRRLAGLDPGV 531 +++D V AEA +LA+RTGGNPFFVSEYARLPRA+R EIPVAVKSVLDRRLAGLDP Sbjct: 478 VADDPVTEAEAALLADRTGGNPFFVSEYARLPRADRVGSEIPVAVKSVLDRRLAGLDPAA 537 Query: 532 LAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHG 591 + VLR AA+IGD +D+D VPVLA+ + ERIV+ AHTGDGY FAHG Sbjct: 538 VQVLRTAAIIGDALDSDAVPVLAQATGMDVDTLADHLDDAADERIVIAAHTGDGYAFAHG 597 Query: 592 LLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXX 651 LLRDHL+AG+P LRRQRLHA++A+VL G+ ++ A+TRRAQHL+AAQPLVD Sbjct: 598 LLRDHLIAGIPPLRRQRLHAKIADVLDGSTAEGALTRRAQHLIAAQPLVDAGAVVQACRL 657 Query: 652 XXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLG 711 T RWSSDIAA WWQAALDAYDR+P ASRSE ERD LTVAMLEAHSRAGRGR VL Sbjct: 658 AAEDATARWSSDIAAVWWQAALDAYDRLPAASRSEEERDGLTVAMLEAHSRAGRGRLVLD 717 Query: 712 YVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXX 771 V L +A+R RA TAG +AS LLR+SGGWPWLAPG DPG +L LL+ Sbjct: 718 TVAAQLGDAVRTGRAATAGRLASALLRASGGWPWLAPGHDPGGVLALLEGAAVLAESDPA 777 Query: 772 XXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERS 831 CYHPD V+AGHL+RA RLAE T D DV+ADVLMGRLITYSGV S Sbjct: 778 AGARVLTALAVGHCYHPDAAVSAGHLERAARLAEATGDRDVIADVLMGRLITYSGVAAYS 837 Query: 832 HEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPV 891 H+ EWVA L L HSRSREDSVIAHSVATM+A+ L + +L + HL+ G+ GSEEL+LPV Sbjct: 838 HQTLEWVAELNALGHSRSREDSVIAHSVATMAAVNLTEIDLAKLHLQEGISGSEELRLPV 897 Query: 892 LRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVP 951 LRAQLRWMEAVLA WRGDF EA+RHH IAA VHEQTELY AGSGL+A V L+RE GGPV Sbjct: 898 LRAQLRWMEAVLAVWRGDFAEAERHHRIAAEVHEQTELYEAGSGLIATVILIRERGGPVE 957 Query: 952 AGFGVTPADVERGGQGMEAMVHVALLTIERG--PRAAAATRLDNW-VNTDRGQIWTNLGE 1008 G+ + AD E GGQGM +VH ALLT++ G RA A RL W R +WT LG Sbjct: 958 PGWPGSRADTESGGQGMVGLVHTALLTVDSGDEARAQALMRLREWDAQPHRAHVWTTLGH 1017 Query: 1009 AAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARA 1068 A +AHLA D+G E+A LL L PF DRIA IGQVG GPVALATARL AL GD RA Sbjct: 1018 ATLLAHLACDHGYAEFAPALLERLLPFVDRIAEIGQVGVVGPVALATARLRALMGDTDRA 1077 Query: 1069 LEDLAKAEDVARRTGARPTLMRCALLACE 1097 DLA AED+A RTG P L+RC LL E Sbjct: 1078 RADLADAEDIAARTGGVPVLLRCRLLRAE 1106 >tr|A1UCT8|A1UCT8_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, SARP family;[Mycobacterium sp.] Length = 1141 Score = 1353 bits (3501), Expect = 0.0 Identities = 713/1109 (64%), Positives = 811/1109 (73%), Gaps = 15/1109 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 MLGPLQV H+ PVDIG+PKQRAVLA+LLLA GRVVSVDRLIDAVWGDD P SATASLQA Sbjct: 1 MLGPLQVTHADCPVDIGSPKQRAVLAVLLLAAGRVVSVDRLIDAVWGDDAPGSATASLQA 60 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 YISNLRRALRD + QVASPIVRQPPGY+L+ VDLA F +GC +A AV+ W Sbjct: 61 YISNLRRALRDAGQS-QVASPIVRQPPGYFLNVEPGQVDLAVFASGCARAVAAVDSGDWD 119 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP L DL DE WV ++AARA LR++C+D RITALL LGRV ALA Sbjct: 120 EALAAADEALAWWRGPLLADLSDESWVADEAARAEHLRADCLDARITALLGLGRVPQALA 179 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 A +LRSA PL+DR CWLHML LYRAGR +ALD YTRHA++LD+ELG+ PG E+RELQT Sbjct: 180 AAAELRSATPLADRGCWLHMLALYRAGRVTDALDVYTRHARLLDDELGVQPGREVRELQT 239 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXX--GAQRGLLIGRKREXXXXXXXX 298 A+LRQAPEL+AWPRSPEWTG G RG LIGR RE Sbjct: 240 AMLRQAPELSAWPRSPEWTGAGAVATPAAPTVEPSVVPAGPSRGALIGRSRELSTAAGVL 299 Query: 299 XXXXXGETRWLVLSGPPGIGKTRLAEEIT-----DGCDAEVVWVSCPDERSTPPWWPMRQ 353 G RWLVLSGP GIGKTRLAEE+ DG D +VWVSCPDER+TPPWWPMRQ Sbjct: 300 SDVAAGAARWLVLSGPAGIGKTRLAEEVAARVVADGGD--MVWVSCPDERATPPWWPMRQ 357 Query: 354 LVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASC 413 LVRALGAD D+VLEVPP ADPDTARF+VYER+Q LLES R VVIDDVQWAD+TSA+C Sbjct: 358 LVRALGADPDDVLEVPPDADPDTARFRVYERIQTLLESAPRTLAVVIDDVQWADTTSAAC 417 Query: 414 LAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQ 473 LAYIAGALRDHPVA++LTVRD +H+AEV+RL+ TVARGD NRH+A+ +LST+DVAALANQ Sbjct: 418 LAYIAGALRDHPVALILTVRDGEHSAEVSRLVTTVARGDRNRHVAVPALSTEDVAALANQ 477 Query: 474 ISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAER--GEIPVAVKSVLDRRLAGLDPGV 531 +++D V AEA +LA+RTGGNPFFVSEYARLPRA+R EIPVAVKSVLDRRLAGLDP Sbjct: 478 VADDPVTEAEAALLADRTGGNPFFVSEYARLPRADRVGSEIPVAVKSVLDRRLAGLDPAA 537 Query: 532 LAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHG 591 + VLR AA+IGD +D+D VPVLA+ + ERIV+ AHTGDGY FAHG Sbjct: 538 VQVLRTAAIIGDALDSDAVPVLAQATGMDVDTLADHLDDAADERIVIAAHTGDGYAFAHG 597 Query: 592 LLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXX 651 LLRDHL+AG+P LRRQRLHA++A+VL G+ ++ A+TRRAQHL+AAQPLVD Sbjct: 598 LLRDHLIAGIPPLRRQRLHAKIADVLDGSTAEGALTRRAQHLIAAQPLVDAGAVVQACRL 657 Query: 652 XXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLG 711 T RWSSDIAA WWQAALDAYDR+P ASRSE ERD LTVAMLEAHSRAGRGR VL Sbjct: 658 AAEDATARWSSDIAAVWWQAALDAYDRLPAASRSEEERDGLTVAMLEAHSRAGRGRLVLD 717 Query: 712 YVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXX 771 V L +A+R RA TAG +AS LLR+SGGWPWLAPG DPG +L LL+ Sbjct: 718 TVAAQLGDAVRTGRAATAGRLASALLRASGGWPWLAPGHDPGGVLALLEGAAVLAESDPA 777 Query: 772 XXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERS 831 CYHPD V+AGHL+RA RLAE T D DV+ADVLMGRLITYSGV S Sbjct: 778 AGARVLTALAVGHCYHPDAAVSAGHLERAARLAEATGDRDVIADVLMGRLITYSGVAAYS 837 Query: 832 HEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPV 891 H+ EWVA L L HSRSREDSVIAHSVATM+A+ L + +L + HL+ G+ GSEEL+LPV Sbjct: 838 HQTLEWVAELNALGHSRSREDSVIAHSVATMAAVNLTEIDLAKLHLQEGISGSEELRLPV 897 Query: 892 LRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVP 951 LRAQLRWMEAVLA WRGDF EA+RHH IAA VHEQTELY AGSGL+A V L+RE GGPV Sbjct: 898 LRAQLRWMEAVLAVWRGDFAEAERHHRIAAEVHEQTELYEAGSGLIATVILIRERGGPVE 957 Query: 952 AGFGVTPADVERGGQGMEAMVHVALLTIERG--PRAAAATRLDNW-VNTDRGQIWTNLGE 1008 G+ + AD E GGQGM +VH ALLT++ G RA A RL W R +WT LG Sbjct: 958 PGWPGSRADTESGGQGMVGLVHTALLTVDSGDEARAQALMRLREWDAQPHRAHVWTTLGH 1017 Query: 1009 AAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARA 1068 A +AHLA D+G E+A LL L PF DRIA IGQVG GPVALATARL AL GD RA Sbjct: 1018 ATLLAHLACDHGYAEFAPALLERLLPFVDRIAEIGQVGVVGPVALATARLRALMGDTDRA 1077 Query: 1069 LEDLAKAEDVARRTGARPTLMRCALLACE 1097 DLA AED+A RTG P L+RC LL E Sbjct: 1078 RADLADAEDIAARTGGVPVLLRCRLLRAE 1106 >tr|A3PWJ4|A3PWJ4_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, SARP family;[Mycobacterium sp.] Length = 1141 Score = 1352 bits (3499), Expect = 0.0 Identities = 714/1109 (64%), Positives = 810/1109 (73%), Gaps = 15/1109 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 MLGPLQV H+ PVDIG PKQRAVLA+LLLA GRVVSVDRLIDAVWGDD P SATASLQA Sbjct: 1 MLGPLQVTHADCPVDIGPPKQRAVLAVLLLAAGRVVSVDRLIDAVWGDDAPGSATASLQA 60 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 YISNLRRALRD + QVASPIVRQPPGY+L+ VDLA F +GC +A AV+ W Sbjct: 61 YISNLRRALRDAGQS-QVASPIVRQPPGYFLNVEPGQVDLAVFASGCARAVAAVDSGDWD 119 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP L DL DE WV ++AARA LR++C+D RITALL LGRV ALA Sbjct: 120 AALAAADEALAWWRGPLLADLSDEPWVADEAARAEHLRADCLDARITALLGLGRVPQALA 179 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 A +LRSA PL+DR CWLHML LYRAGR +ALD YTRHA++LD+ELG+ PG E+RELQT Sbjct: 180 AAAELRSATPLADRGCWLHMLALYRAGRVTDALDVYTRHARLLDDELGVQPGREVRELQT 239 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXX--GAQRGLLIGRKREXXXXXXXX 298 A+LRQAPELAAWPRSPEWTG G RG LIGR RE Sbjct: 240 AMLRQAPELAAWPRSPEWTGAGAVATPAAPTVEPSVVPAGPSRGALIGRSRELSTAAGVL 299 Query: 299 XXXXXGETRWLVLSGPPGIGKTRLAEEIT-----DGCDAEVVWVSCPDERSTPPWWPMRQ 353 G RWLVLSGP GIGKTRLAEE+ DG D +VWVSCPDER+TPPWWPMRQ Sbjct: 300 SDVTAGAARWLVLSGPAGIGKTRLAEEVAARVVADGGD--MVWVSCPDERATPPWWPMRQ 357 Query: 354 LVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASC 413 LVRALGAD D+VLEVPP ADPDTARF+VYER+Q LLES R VVIDDVQWAD+TSA+C Sbjct: 358 LVRALGADPDDVLEVPPDADPDTARFRVYERIQTLLESAPRTLAVVIDDVQWADTTSAAC 417 Query: 414 LAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQ 473 LAYIAGALRDH VA++LTVRD +H+AEV+RL+ TVARGD NRH+A+ +LST+DVAALANQ Sbjct: 418 LAYIAGALRDHAVALILTVRDGEHSAEVSRLVTTVARGDRNRHVAVPALSTEDVAALANQ 477 Query: 474 ISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAER--GEIPVAVKSVLDRRLAGLDPGV 531 +++D V AEA +LA+RTGGNPFFVSEYARLPRA+R EIPVAVKSVLDRRLAGLDP Sbjct: 478 VADDPVTEAEAALLADRTGGNPFFVSEYARLPRADRVGSEIPVAVKSVLDRRLAGLDPAA 537 Query: 532 LAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHG 591 + VLR AA+IGD +D+D VPVLA+ + ERIV+ AHTGDGY FAHG Sbjct: 538 VQVLRTAAIIGDTLDSDAVPVLAQATGMDVDTLADHLDDAADERIVIAAHTGDGYAFAHG 597 Query: 592 LLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXX 651 LLRDHL+AG+P LRRQRLHA++A+VL G+ ++ A+TRRAQHL+AAQPLVD Sbjct: 598 LLRDHLIAGIPPLRRQRLHAKIADVLDGSTAEGALTRRAQHLIAAQPLVDAGAVVQACRL 657 Query: 652 XXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLG 711 T RWSSDIAA WWQAALDAYDR+P ASRSE ERD LTVAMLEAHSRAGRGR VL Sbjct: 658 AAEDATARWSSDIAAVWWQAALDAYDRLPAASRSEEERDGLTVAMLEAHSRAGRGRLVLD 717 Query: 712 YVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXX 771 V L +A+R RA TAG +AS LLR+SGGWPWLAPG DPG +L LL+ Sbjct: 718 TVAAQLGDAVRTGRAATAGRLASALLRASGGWPWLAPGHDPGGVLALLEGAAVLAESDPA 777 Query: 772 XXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERS 831 CYHPD V+AGHL+RA RLAE T D DV+ADVLMGRLITYSGV S Sbjct: 778 AGARVLTALAVGHCYHPDAAVSAGHLERAARLAEATGDRDVIADVLMGRLITYSGVAAYS 837 Query: 832 HEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPV 891 H+ EWVA L L HSRSREDSVIAHSVATM+A+ L + +L + HL+ G+ GSEEL+LPV Sbjct: 838 HQTLEWVAELNALGHSRSREDSVIAHSVATMAAVNLTEIDLAKLHLQEGISGSEELRLPV 897 Query: 892 LRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVP 951 LRAQLRWMEAVLA WRGDF EA+RHH IAA VHEQTELY AGSGL+A V L+RE GGPV Sbjct: 898 LRAQLRWMEAVLAVWRGDFAEAERHHRIAAEVHEQTELYEAGSGLIATVILIRERGGPVE 957 Query: 952 AGFGVTPADVERGGQGMEAMVHVALLTIERG--PRAAAATRLDNW-VNTDRGQIWTNLGE 1008 G+ + AD E GGQGM +VH ALLT++ G RA A RL W R +WT LG Sbjct: 958 PGWPGSRADTESGGQGMVGLVHTALLTVDSGDEARAQALMRLREWDAQPHRAHVWTTLGH 1017 Query: 1009 AAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARA 1068 A +AHLA D+G E+A LL L PF DRIA IGQVG GPVALATARL AL GD RA Sbjct: 1018 ATLLAHLACDHGYAEFAPALLERLLPFVDRIAEIGQVGVVGPVALATARLRALMGDTDRA 1077 Query: 1069 LEDLAKAEDVARRTGARPTLMRCALLACE 1097 L DLA AED+A RTG P L+RC LL E Sbjct: 1078 LADLADAEDIAARTGGVPVLLRCRLLRAE 1106 >tr|A1T637|A1T637_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Mycobacterium vanbaalenii] Length = 1141 Score = 1331 bits (3445), Expect = 0.0 Identities = 703/1110 (63%), Positives = 803/1110 (72%), Gaps = 17/1110 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 MLGPLQVVH T +D+G KQRAVLA+LLLAQGRVVS DRL DAVWGDD PAS TASLQ Sbjct: 1 MLGPLQVVHGETVIDVGPRKQRAVLAVLLLAQGRVVSTDRLADAVWGDDVPASVTASLQV 60 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 YISNLRRALRD +Q+ASPIVRQPPGY+LD D VD++ FTAGC +AA A++ +RW Sbjct: 61 YISNLRRALRD----SQMASPIVRQPPGYFLDVGPDEVDVSAFTAGCARAAAAIDAERWE 116 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 RG L+D+ D WV E AAR E+R+EC+ +++ ALLALG+V AL Sbjct: 117 EALTEADTALGLVRGELLEDMADADWVREAAARVAEMRTECLANKVMALLALGKVPAALT 176 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 V++LR +PL DR+C L MLTLYRAGRA EAL+AYTRHA++LD ELGL PG ELRELQT Sbjct: 177 EVSRLREVDPLGDRSCKLQMLTLYRAGRAAEALEAYTRHARLLDAELGLEPGPELRELQT 236 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQ----RGLLIGRKREXXXXXX 296 A+LRQAPELA WPRSPEWTG + R L+GR+RE Sbjct: 237 AVLRQAPELAGWPRSPEWTGAAALPQPQPEPATVPPAAMEAVSHRAPLVGRERELARAAD 296 Query: 297 XXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDA---EVVWVSCPDERSTPPWWPMRQ 353 G TRWLVLSGPPGIGKTRLAEEI A EV WVSCPDER+TPPWWPMR+ Sbjct: 297 VLARAAAGATRWLVLSGPPGIGKTRLAEEIAGLVGARGGEVAWVSCPDERATPPWWPMRR 356 Query: 354 LVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASC 413 LVRALGADADEVLE+P HADPDTARF VYER+QALLE+ R VV+DDVQW+D+ SA+C Sbjct: 357 LVRALGADADEVLEIPAHADPDTARFLVYERIQALLEAAPRLLAVVVDDVQWSDTASAAC 416 Query: 414 LAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQ 473 LAYIAGALRDHPV ++ TVRD +H EVARLL+TVARG+ NRH+ + +LS+ DVA LAN+ Sbjct: 417 LAYIAGALRDHPVLVIATVRDGEHAPEVARLLSTVARGEDNRHIEVPALSSADVATLANE 476 Query: 474 ISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAERG--EIPVAVKSVLDRRLAGLDPGV 531 ++E+ V AEA LA RTGGNPFFVSEYARLPR ER EIP AV+SVLDRRLA LDP V Sbjct: 477 VAEETVTAAEAAELAARTGGNPFFVSEYARLPREERAGNEIPRAVRSVLDRRLAALDPAV 536 Query: 532 LAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHG 591 + VLR AAVIGD IDA VPVLA+ ++ ERIVV AH GDGY FAHG Sbjct: 537 VQVLRAAAVIGDVIDASAVPVLAQATRLDLDTLADYLDEAADERIVVAAHAGDGYAFAHG 596 Query: 592 LLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXX 651 LLR+ L+A +PALRRQR+HA+VAEVLA + + DA TRRAQHL+AAQPLV+P Sbjct: 597 LLREQLLASMPALRRQRMHAKVAEVLADSTAPDAPTRRAQHLIAAQPLVEPAAVVQACRL 656 Query: 652 XXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLG 711 T +WSSDIAAGWWQAALDAYDR+P + R +TERDALTV +LEAHSRAGRG+ VL Sbjct: 657 AAEQATAQWSSDIAAGWWQAALDAYDRLPASERDDTERDALTVELLEAHSRAGRGQLVLD 716 Query: 712 YVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXX 771 V+R+L EALR RA +AG VAS LLR+SGGWPWLAPG DPG LL LL R Sbjct: 717 SVQRYLGEALRTGRAASAGRVASALLRASGGWPWLAPGHDPGELLALLGRAATLSEGQPA 776 Query: 772 XXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERS 831 CYHPD VA LDRAERLAE T DPDVLADVLMGRLIT+SGV S Sbjct: 777 SAARVLPALAVGHCYHPDRRVAEDLLDRAERLAEETGDPDVLADVLMGRLITFSGVATVS 836 Query: 832 HEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPV 891 HE +WV RL L H RSREDSVIAHSVATM+AM L D T RH+ AG+ GSEELQLPV Sbjct: 837 HETLQWVERLNALGHKRSREDSVIAHSVATMAAMNLGDVAATRRHVEAGIAGSEELQLPV 896 Query: 892 LRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVP 951 LRAQLRWMEAVLA W GDF EA RHH+IAAHVHEQTELY AGSGLLA +L+RE GGPV Sbjct: 897 LRAQLRWMEAVLAMWIGDFAEAARHHAIAAHVHEQTELYEAGSGLLATASLVRERGGPVD 956 Query: 952 AGFGVTPADVERGGQGMEAMVHVALLTIERGP--RAAAATRLDNW--VNTDRGQIWTNLG 1007 AG+ A E GGQ M +V ALLT+E GP RA A RL W +T RG IWT LG Sbjct: 957 AGWAAVQASKETGGQDMVGVVRTALLTLESGPQARAEAVARLRKWARTSTGRGDIWTTLG 1016 Query: 1008 EAAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRAR 1067 A +AH+A D+GL E+AEPLLA L PF DRIAV+GQVG AGPVALATARLHALRGD R Sbjct: 1017 HHALLAHMAADHGLDEFAEPLLAELDPFRDRIAVLGQVGMAGPVALATARLHALRGDTRR 1076 Query: 1068 ALEDLAKAEDVARRTGARPTLMRCALLACE 1097 AL D+ A +A R+ PTL+RC LL C+ Sbjct: 1077 ALADVTVARQIAERSAGVPTLLRCRLLVCQ 1106 >tr|A4TFF7|A4TFF7_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Mycobacterium gilvum] Length = 1148 Score = 1288 bits (3333), Expect = 0.0 Identities = 681/1110 (61%), Positives = 796/1110 (71%), Gaps = 14/1110 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPLQVVH VDIG KQR+VLA LLLAQGRVVS DRL+D VWGDD PASATASLQ Sbjct: 5 LLGPLQVVHGEAAVDIGPRKQRSVLAALLLAQGRVVSTDRLVDVVWGDDVPASATASLQV 64 Query: 61 YISNLRRALRDGSD---TAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQ 117 YISNLRRALR G+ + VA PIVRQPPGY+LDA D D+A FTA C +AA A++ + Sbjct: 65 YISNLRRALRSGAGDRTVSSVAQPIVRQPPGYFLDAGPDESDIAVFTAACARAAAAIDGE 124 Query: 118 RWVXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVST 177 RW RG L+D+ D W+ EDAAR E+R+EC+ ++ +LLALG++ Sbjct: 125 RWDEALAEADTALSLVRGELLEDIGDADWIREDAARFAEMRTECLAGKVMSLLALGKIPA 184 Query: 178 ALAAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRE 237 AL A +QL + +PL+DR C L ML LYRAGR +AL+ YTR+A+ LD ELGL PG ELR+ Sbjct: 185 ALTAASQLGALDPLADRGCRLQMLALYRAGRTADALEVYTRYARRLDAELGLEPGPELRD 244 Query: 238 LQTAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXX--GAQRGLLIGRKREXXXXX 295 LQTA+LRQAPEL+ WPRSP WTG + R L+GR+RE Sbjct: 245 LQTAVLRQAPELSGWPRSPGWTGAAAVTATEAVPVRLDTVESASHRAPLVGRRRELAAAA 304 Query: 296 XXXXXXXXGETRWLVLSGPPGIGKTRLAEEITD---GCDAEVVWVSCPDERSTPPWWPMR 352 G RWLVLSGPPGIGKTRLAEEI D +VVWV+CPDER TPPWWPMR Sbjct: 305 DVLDRVTAGAARWLVLSGPPGIGKTRLAEEIAGLVAAGDGDVVWVNCPDERGTPPWWPMR 364 Query: 353 QLVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSAS 412 QLVRALGADADEVLE+PPHADPDTARF VYER+Q LLES R VV+DDVQWAD+TSA+ Sbjct: 365 QLVRALGADADEVLEIPPHADPDTARFLVYERIQRLLESAPRLLAVVVDDVQWADTTSAA 424 Query: 413 CLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALAN 472 CLAYIAG LRD PV +V+TVRD +H AEV+RLL+TVARG+ NR + + +LS++DVA LAN Sbjct: 425 CLAYIAGTLRDRPVLVVVTVRDGEHPAEVSRLLSTVARGEANRLIEVPALSSEDVATLAN 484 Query: 473 QISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAERG--EIPVAVKSVLDRRLAGLDPG 530 +++E+VV AEA LA+RTGGNPFFVSEYARLPR ER EIP AV+SVLDRRLA LDP Sbjct: 485 EVAEEVVTAAEAAELADRTGGNPFFVSEYARLPREERAGNEIPRAVRSVLDRRLAALDPA 544 Query: 531 VLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAH 590 V+ VLR AAVI D +D+ VP+LAR + ERI+VN+HTGDGY FAH Sbjct: 545 VMQVLRAAAVIADVLDSVTVPLLARTTALDLDTLADYLDEAADERIIVNSHTGDGYVFAH 604 Query: 591 GLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXX 650 GLLR+ L+ G+PALRRQR+HA+VA+VLA + DA T RAQHLVAAQPLV+P Sbjct: 605 GLLREQLLTGMPALRRQRVHAKVADVLADSALPDAPTWRAQHLVAAQPLVEPTVVVPACR 664 Query: 651 XXXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVL 710 TQ+WSSDIAAGWWQAALDAYDR+P + R + +RDALTV +LEAHSRAGRG+ VL Sbjct: 665 LAAEQATQQWSSDIAAGWWQAALDAYDRLPASERDDADRDALTVELLEAHSRAGRGQLVL 724 Query: 711 GYVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXX 770 V R+L EALR RA +AG VAS LLR+SGGWPWLAPG+DPG LLTLL R Sbjct: 725 DSVTRYLGEALRTGRAASAGRVASALLRASGGWPWLAPGNDPGELLTLLSRAATLSEGEP 784 Query: 771 XXXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNER 830 CYHPDP +A LDRAERLAE T DPDV+ADVL+GRLIT+SGV Sbjct: 785 ASAARVLPALAVGHCYHPDPTIAPELLDRAERLAEATGDPDVIADVLIGRLITFSGVATL 844 Query: 831 SHEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLP 890 S + EWV RL L+HSRSRED+VIAHSVATM+AM L D + RH++AG+ GSEELQLP Sbjct: 845 SAQSLEWVQRLNALRHSRSREDAVIAHSVATMAAMNLGDVDGARRHVQAGIAGSEELQLP 904 Query: 891 VLRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPV 950 VLRAQLRWMEAVLA W GDF EA RHH+IAAHVHEQTELY AGSGLLA TLLRE GGPV Sbjct: 905 VLRAQLRWMEAVLAVWHGDFAEAGRHHAIAAHVHEQTELYEAGSGLLARATLLRERGGPV 964 Query: 951 PAGFGVTPADVERGGQGMEAMVHVALLTIERGP--RAAAATRLDNWV-NTDRGQIWTNLG 1007 + A + GG GM +V +LT+ GP RA A L +W +TDR IWT LG Sbjct: 965 DPSWTDLNAQ-QAGGLGMVGVVRTGVLTLLSGPKARAEALATLRHWAQHTDRAHIWTTLG 1023 Query: 1008 EAAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRAR 1067 +AHLAVD+ L ++AEPLLA L P+ DRIAVIGQVG AGPVALATARLHALRGD+A Sbjct: 1024 HHTLLAHLAVDHDLPDFAEPLLAQLDPYRDRIAVIGQVGMAGPVALATARLHALRGDKAA 1083 Query: 1068 ALEDLAKAEDVARRTGARPTLMRCALLACE 1097 AL DLA A +A R+ PTL+RC LL CE Sbjct: 1084 ALADLALARSIAERSAGVPTLLRCRLLECE 1113 >tr|C3JMK7|C3JMK7_RHOER Tax_Id=596309 SubName: Full=Putative transcriptional regulatory protein;[Rhodococcus erythropolis SK121] Length = 1129 Score = 886 bits (2289), Expect = 0.0 Identities = 515/1142 (45%), Positives = 652/1142 (57%), Gaps = 30/1142 (2%) Query: 1 MLGPLQVVH---SGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATAS 57 +LGPL+V + +D+G KQR VLA+LLL +GRVVS DRLIDA+W DD PASA AS Sbjct: 5 LLGPLEVARGPATSDVIDLGPRKQRTVLAVLLLNRGRVVSTDRLIDALWHDDAPASAMAS 64 Query: 58 LQAYISNLRRALRDGSDTAQVASPIVRQPPGYYLD-APADAVDLAQFTAGCQQAAQAVEE 116 +QAYISNLRRALR + TA SPIVRQ PGY L+ APAD VDL+ F + A Q E Sbjct: 65 IQAYISNLRRALRVETGTA---SPIVRQSPGYVLEVAPAD-VDLSVFLDDAETARQHAEN 120 Query: 117 QRWVXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVS 176 +RW RG LDDL D WV +AA E+R+EC + RITALLALGR++ Sbjct: 121 ERWQEALTAADRALASVRGQLLDDLNDAHWVEVEAAAFEEVRTECRETRITALLALGRLA 180 Query: 177 TALAAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELR 236 AL QL P DR CWL M+ L+RAGR+PEAL+ + HA LD ELGL PG EL Sbjct: 181 PALVEAAQLCGEYPFRDRTCWLRMVALHRAGRSPEALEQFRLHASRLDAELGLEPGGELT 240 Query: 237 ELQTAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRG-LLIGRKREXXXXX 295 LQ AILR P LAAWPR+P WTG L +GR + Sbjct: 241 ALQGAILRHEPGLAAWPRTPGWTGAEQVSVPASPPAVAAMPETDSSRLFVGRDAQTMVAD 300 Query: 296 XXXXXXXXGETRWLVLSGPPGIGKTRLAEEI---TDGCDAEVVWVSCPDERSTPPWWPMR 352 G RWL+L+GP GIGKTR AEE T VW CP++ TPPWWP+R Sbjct: 301 KMLDDVRRGSPRWLILTGPAGIGKTRFAEECSSRTTSIRGATVWARCPEDDGTPPWWPIR 360 Query: 353 QLVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAV--VVIDDVQWADSTS 410 +LVR LGADAD VL P DPD ARF VYERV+ +E+ + A+ VVIDD+QWAD TS Sbjct: 361 RLVRELGADADFVLTPPTDIDPDEARFAVYERVRTTIEAAAKDALLTVVIDDIQWADPTS 420 Query: 411 ASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAAL 470 CL Y+ GA+ V V T+RD++ V + V G+GNR + + +L+ +VA L Sbjct: 421 LRCLTYLVGAMTSARVWFVSTLRDLEVGPAVRKFEEAVLHGEGNRTMIVPALAQGEVATL 480 Query: 471 ANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAER--GEIPVAVKSVLDRRLAGLD 528 A +S D +D AEA+ L ERTGGNP FVSEYARLPR ER IPVAV+SVL RRLA ++ Sbjct: 481 ARCVSGDTLDDAEARTLTERTGGNPLFVSEYARLPRNERLGDGIPVAVRSVLGRRLAAVE 540 Query: 529 PGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTF 588 P VL LRVAAVIGD I+ V LA ++ ERI+V GY F Sbjct: 541 PAVLQDLRVAAVIGDAIE---VYTLAAATRLDVDTLADHLDAAADERIIVADSANGGYVF 597 Query: 589 AHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXX 648 AHGLLRD ++ +P LRRQR+HA+VAEVL + D ++RRAQHL++A PLVDP Sbjct: 598 AHGLLRDEVLEAIPTLRRQRIHARVAEVLENSSDPDRLSRRAQHLMSALPLVDPLVVLEA 657 Query: 649 XXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRT 708 T RWSS+ AA WW+AA+ A+D +PV+ +S +RD L VA +EA +RAGRG+T Sbjct: 658 CTAAAQDATDRWSSETAAEWWEAAVRAFDSLPVSQQSADDRDDLLVARVEALARAGRGQT 717 Query: 709 VLGYVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXX 768 VL V L EA+R R G +A LLR++G WPW++ G DPG LL L Sbjct: 718 VLDVVNAGLLEAVREGRTSAVGRLAGALLRAAGAWPWVSYGTDPGPLLERLAAVEPLVEN 777 Query: 769 XXXXXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVN 828 CYHP+ + RA +A +DPDV+AD L+GR++ +SGV Sbjct: 778 DRAAHARVLAALAVGSCYHPEAEIPNRWSARALDIARELDDPDVIADALLGRILLFSGVA 837 Query: 829 ERSHEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQ 888 S E + L L H +SR DSV+AH+VA+M+ M LA+ + +H+R G++G E L+ Sbjct: 838 LHSAESMRLLRELFELPHQQSRVDSVVAHAVASMTEMNLANVDAAVKHVRQGIIGCELLR 897 Query: 889 LPVLRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGG 948 LPV+R QLRWMEA LA W GDF +A+R + A +H QTELY AGS LA TL E G Sbjct: 898 LPVVRVQLRWMEATLAEWYGDFAQARRQYETARQIHLQTELYTAGSADLAFNTLEWERGA 957 Query: 949 PVPAGFGVTPADVERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQIWTNLGE 1008 + GV D + RG R A + + W+ Q WT LG Sbjct: 958 LAESDPGVVEPD-----------SWTIAIDAARGEREATSEGIKKWLINRGPQTWTTLGH 1006 Query: 1009 AAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARA 1068 +A + D L +YA+ + +L P T IA +G VG G VA A+ARLHAL G +A Sbjct: 1007 QTLLARVVADLELVDYADTFIGLLSPHTGCIATVGHVGELGSVAEASARLHALLGHVEQA 1066 Query: 1069 LEDLAKAEDVARRTGARPTLMRCALLACEXXXXXXXXXXXXXXXXXXXXXXXXHGIAAQA 1128 L +AE +A +G PTL+RC LL + G+A +A Sbjct: 1067 STLLDQAEKIATGSGGAPTLLRCRLLRAQLREPSAERERELTEVAAESETLGMRGVAERA 1126 Query: 1129 RS 1130 RS Sbjct: 1127 RS 1128 >tr|Q0RLB7|Q0RLB7_FRAAA Tax_Id=326424 SubName: Full=Putative uncharacterized protein;[Frankia alni] Length = 1158 Score = 746 bits (1927), Expect = 0.0 Identities = 461/1116 (41%), Positives = 598/1116 (53%), Gaps = 34/1116 (3%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 + GP++VV G P+ +G PKQRAVLA LLL GRVVSVDR+ DAVWG P S +SL A Sbjct: 9 LFGPIEVVRDGRPILLGGPKQRAVLATLLLDAGRVVSVDRIADAVWGAQHPPSKLSSLHA 68 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 +ISNLRR LRD + SPI+R+ PGY D PA +D+ F A C +A A + + W Sbjct: 69 HISNLRRLLRDDE---RATSPILRRTPGYVADLPAGDIDVRLFEAECDRAQAAADGEDWP 125 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 RGP L + DE WV A E + + LL GR++ A+ Sbjct: 126 RAVEAADRAAALRRGPLLAEFADEPWVLAAAGALDERWVQGEQSAVVGLLGAGRITAAVL 185 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 +L + PL+ RACWLH++ LYRAGRA EAL+ A+ +D ELGL G LR+L Sbjct: 186 RSRRLLADAPLAQRACWLHVIALYRAGRAAEALEVLRAQARRMDVELGLEVGPALRDLHG 245 Query: 241 AILRQAPELAAWP--RSPEWTGXXXXXXXXXXXXXXXXXG---------AQRGLLIGRKR 289 AILRQ P L +WP R TG G ++ G L+GR R Sbjct: 246 AILRQDPGLESWPVPRHQAATGPLDRAGSAGGSGAPTADGVAGRGAQAASEPGDLVGRVR 305 Query: 290 EXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEIT---DGCDAEVVWVSCPDERSTP 346 E G RW+VL+GP GIGK+RLAEE V CPD+ + P Sbjct: 306 ELAALESVLSQARTGAGRWVVLTGPAGIGKSRLAEEAAARWQRAGGAVSRTGCPDDDAVP 365 Query: 347 PWWPMRQLVRALGADADEVLEVPPHADPDTARFQVYERVQ-ALLESTG-RPAVVVIDDVQ 404 PWWP+RQL+R LGAD ++ L P D D ARF VY+RV AL E+ RP ++V +DV Sbjct: 366 PWWPVRQLLRDLGADPEDALTPPSGVDADAARFAVYDRVLGALAEAVRVRPLLLVAEDVH 425 Query: 405 WADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLST 464 WAD S L ++AGA +A++ T RDV E+ RLLAT AR G+RHLA+ L+ Sbjct: 426 WADPASLRLLTHLAGAGTVPGLAVIATARDVAGRPELDRLLATAARRHGSRHLAVPPLTE 485 Query: 465 DDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAER--GEIPVAVKSVLDR 522 +V+ L ++IS +D AEA LAERT GNPFFV EYARLP ER G++PVAV+SVL + Sbjct: 486 AEVSELVSRISGQAIDAAEAAQLAERTSGNPFFVCEYARLPADERAGGQVPVAVRSVLGQ 545 Query: 523 RLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHT 582 RLAGLDP VL VLR AAVIGD +D + +LARV ++ E ++V A Sbjct: 546 RLAGLDPAVLQVLRAAAVIGDALD---IELLARVTRLDRDELADLLDEAADEHVIVQAAG 602 Query: 583 GDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDP 642 Y FAH LLR+ ++AG+ LRRQRLH ++AE + P +A+TRRA HLVAA PL D Sbjct: 603 TGRYVFAHALLREEVVAGISHLRRQRLHLRIAEAIGSAPGGEALTRRAAHLVAAAPLADA 662 Query: 643 XXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSR 702 RW +D+AA WW ALD DR PV E +RD L VA + + +R Sbjct: 663 ADVFDACRAAAVEADNRWHADLAAYWWAQALDTLDRGPVDLDPEVDRDELVVARVGSLAR 722 Query: 703 AGRGRTVLGYVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRX 762 AGRG+T+L V+ L +ALR R D+AG +A+ LLR+SG WPW GDDP LL L Sbjct: 723 AGRGQTLLDVVDAGLLDALRRGRLDSAGRLAAALLRTSGSWPWAVFGDDPAPLLARLAGL 782 Query: 763 XXXXXXXXXXXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLI 822 CY PD V RA LAER D + LAD L+GR + Sbjct: 783 ETLVAADPVAHVRVLSALAVGSCYDPDGSVPDLLSRRAVELAERIGDGEALADALLGRAL 842 Query: 823 TYSGVNERSHEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVV 882 +SG+ R+ E E + RL + H+ + D VI H + ++ L D E H R G + Sbjct: 843 AFSGIATRAAETVELIGRLATVPHASAPVDEVIGHGLLYLAKAALGDPAAVE-HARLGAL 901 Query: 883 GSEELQLPVLRAQLRWMEAVLATWRGD-FDEAQRHHSIAAHVHEQTELYGAGSGLLAEVT 941 GS+ L+LP R Q RW + LA WR D A+ + AA +H +TELY +G+ A +T Sbjct: 902 GSDLLRLPASRVQFRWAQGSLALWRDDELSTAEGIYRHAAELHRETELYQSGADHAARLT 961 Query: 942 LLREIGGPVPAGFGVTPADVERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQ 1001 L E G + D + A + L + RG A ++ Sbjct: 962 LRWEQG-------RLHEDDAQALPDSPFAPLAAVLTAVARGEPVADELIAAELARSEPVS 1014 Query: 1002 IWTNLGEAAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHAL 1061 WT +AH D GL E+A L A L P + +A +G G AGPVALA ARL AL Sbjct: 1015 -WTTHSRLTILAHAVADRGLREHAATLAARLAPVSHCVANVGHCGMAGPVALALARLAAL 1073 Query: 1062 RGDRARALEDLAKAEDVARRTGARPTLMRCALLACE 1097 GD A A LA A +A R+ L+RC L+A + Sbjct: 1074 TGDVAGARVHLATATALAARSHGVGALLRCRLVAAQ 1109 >tr|D3CZZ1|D3CZZ1_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Frankia sp. EUN1f] Length = 1170 Score = 713 bits (1841), Expect = 0.0 Identities = 460/1142 (40%), Positives = 588/1142 (51%), Gaps = 71/1142 (6%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 + GP++V+ G PV G PKQRAVLA LLL GRVVSVDRL DA WGDD P S ASLQA Sbjct: 9 LFGPIEVIREGDPVSFGGPKQRAVLAALLLNAGRVVSVDRLADAAWGDDHPPSMLASLQA 68 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 ++SNLRR LRD SPIVR+ PGY +D PAD VDL F C QA AV+ W Sbjct: 69 HVSNLRRLLRDDE---HATSPIVRRTPGYLMDVPADEVDLRLFERACGQAQAAVDAGDWQ 125 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 RGP L + DE WV A E S+C + + ALL LGRV+ A+ Sbjct: 126 RALEAADRATALRRGPLLAEFADEPWVRRSADTVAERWSQCEQNAVVALLGLGRVAAAVP 185 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 QL P S+ AC L M+ LYRAGR EAL+A+ HA+ LD +LGL LR+LQ Sbjct: 186 RSRQLLLDTPGSEGACRLRMIALYRAGRPAEALEAFGEHARRLDEDLGLDVSPALRDLQG 245 Query: 241 AILRQAPELAAWP------------------------------RSPEWTGXXXXXXXXXX 270 AILRQ P L WP +P T Sbjct: 246 AILRQDPALDFWPGQAPTAPTAFVTTIATAPTATATAPTVITPTTPTPTSTPTAAAAAAT 305 Query: 271 XXXXXXXGAQRGLLIGRKREXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGC 330 GA R L+GR+ E G+ RW+VL+GP GIGK+RLA E Sbjct: 306 TTTTTASGA-RADLVGREHEISALHSALGEAVAGDGRWIVLTGPAGIGKSRLAHE----- 359 Query: 331 DAEVVW---------VSCPDERSTPPWWPMRQLVRALGADADEVLEVPPHADPDTARFQV 381 A V+W CPD+ + PPWWP RQL+R LGA+ D+VL P D D ARF V Sbjct: 360 -AAVIWRRAGGRPVRTGCPDDEALPPWWPARQLLRELGAEPDDVLTPPSGVDADAARFVV 418 Query: 382 YERVQALLESTGR--PAVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTA 439 Y+RV L + R P ++VI+DV WAD S LA++A A +++V+T RDV Sbjct: 419 YDRVIEALTAAARTSPLLLVIEDVHWADPASLRLLAHLADAGPRPGISMVVTARDVAGRP 478 Query: 440 EVARLLATVARGDGNRHLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVS 499 + RLLA AR G+R LA+ L+ +V LA ++S + AEA LAERTGGNPFFV Sbjct: 479 ALDRLLAAAARRHGSRRLAVPPLTRAEVVELACRVSGQEIGAAEAAELAERTGGNPFFVC 538 Query: 500 EYARLPRAER--GEIPVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVA 557 EYARLP ER G IP+AV+SVL +RLAGLDP VL VLR AA+IGD +D + +L V Sbjct: 539 EYARLPARERAEGTIPLAVRSVLGQRLAGLDPAVLQVLRAAALIGDTLD---IGLLRAVT 595 Query: 558 KIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVL 617 ++ E ++V A Y FAH LLRD ++AGL +LRRQRLH ++AE L Sbjct: 596 RLDPDVLADMLDEASDEHVIVPAAGTGRYMFAHALLRDEVVAGLSSLRRQRLHLRIAEAL 655 Query: 618 AGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYD 677 + ++RRA HLVAA PL +RW S+ AA WW AL D Sbjct: 656 DPAEGGETLSRRAAHLVAAWPLAQAPDVLAACRAAALDAERRWQSEAAARWWGQALAIVD 715 Query: 678 RVPVASRSETERDALTVAMLEAHSRAGRGRTVLGYVERHLTEALRNERADTAGLVASVLL 737 + P + +RD L VA + A +R GRG+T+L ++ L +A+R R D+AG +AS LL Sbjct: 716 QSP--RDLDVDRDELLVAQVHALARHGRGQTLLDLIDAGLLDAVRRGRLDSAGRLASALL 773 Query: 738 RSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXXXXXXXXXXXXXXCCYHPDPGVAAGHL 797 R++G WPW A GDDP LL L Y PD V Sbjct: 774 RTTGCWPWPAYGDDPAPLLARLAGLETLVTADPAAHIRVLAALAVGSTYDPDSSVPDRLS 833 Query: 798 DRAERLAERTEDPDVLADVLMGRLITYSGVNERSHEIFEWVARLEVLQHSRSREDSVIAH 857 RA LAER D + LAD L+GR + +SG+ ER+ E + RL + HS ++ D VIAH Sbjct: 834 RRAIELAERLGDDECLADALLGRALAFSGIAERATESVALLTRLAEVPHSSAQIDQVIAH 893 Query: 858 SVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRAQLRWMEAVLATWR-GDFDEAQRH 916 + ++ + L D E+ R G VGS+ L+LP R Q RW + LA W D A+R Sbjct: 894 GLGYLAKITLGDPSAAEQ-ARLGAVGSDLLRLPATRVQFRWAQGSLALWHDSDLAAAERT 952 Query: 917 HSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVPAGFGVTPADVERGGQGMEAMVHVAL 976 + A +H +TELY +G+ A + L E G + D G + + Sbjct: 953 YDQAFALHGETELYQSGAYDFARLALRWEQG-------RLHEPDDRVSGAPLPPWAAAVI 1005 Query: 977 LTIERGPRAAAATRLDNWVNTDRGQI-WTNLGEAAWMAHLAVDYGLGEYAEPLLAVLQPF 1035 P AA L T+ G + WT +AH D GL E+AE L L P Sbjct: 1006 AAARDDP---AADELLAAAVTETGPVTWTTHARLTLLAHAVADRGLREHAETLTTRLAPI 1062 Query: 1036 TDRIAVIGQVGHAGPVALATARLHALRGDRARALEDLAKAEDVARRTGARPTLMRCALLA 1095 IA +GQ G AGPVAL ARL L GD A L A +VA R+ L+ L+A Sbjct: 1063 AGNIANLGQCGMAGPVALGLARLAELTGDIPAARAHLRTALEVATRSRGVGALLHTRLVA 1122 Query: 1096 CE 1097 + Sbjct: 1123 AQ 1124 >tr|A8L6B3|A8L6B3_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Frankia sp.] Length = 1198 Score = 665 bits (1715), Expect = 0.0 Identities = 447/1174 (38%), Positives = 575/1174 (48%), Gaps = 105/1174 (8%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 + G ++VV G PV +G PKQRAVLA LLL GRVVSVDRL AVWGD+ P S +SL A Sbjct: 9 LFGSIEVVRDGRPVQLGGPKQRAVLAALLLDAGRVVSVDRLAGAVWGDEHPPSMLSSLHA 68 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 +ISNLRR LRD + SPIVR+ PGY D P++ +DL F C +A A + W Sbjct: 69 HISNLRRLLRDDE---RATSPIVRRTPGYLADVPSNDLDLRLFERECDRAQAAADAGDWP 125 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 RGP L + DE WV A E ++C + LL GR++ A+ Sbjct: 126 DAVAAADRAAALRRGPLLAEFGDEPWVRGVANAVDERWAQCERSAVVGLLGSGRITAAVL 185 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPE----------------------------- 211 QL PL++RAC LHM+ LYRAGRA E Sbjct: 186 RSRQLVHDAPLAERACHLHMIALYRAGRAAEALDAFRDHARRLADELGLEASPALRDLQG 245 Query: 212 -------ALDAYTRHAQMLDNELGLVPGAELRELQTAILRQAPELAAWPRSP-------- 256 ALD++ + D P A + AA P +P Sbjct: 246 AILRQDPALDSWPASPRTADRATPTTPAAPTGPANASTGPATTAAAANPANPIAANPIAV 305 Query: 257 --EWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXXXXXXGETRWLVLSGP 314 GA+ G L+GR RE G RW+VL+GP Sbjct: 306 GAARPAAPTTMAGSGASEGEGTPGARYGELVGRVREIAVLDSVLSEAMTGPVRWVVLTGP 365 Query: 315 PGIGKTRLAEEITDG---CDAEVVWVSCPDERSTPPWWPMRQLVRALGADADEVLEVPPH 371 GIGK+RLAEE G V CPD+ + PPWWP+RQL+R LGAD D++L P Sbjct: 366 AGIGKSRLAEEAAAGWHRAGGAVSRTGCPDDDAVPPWWPVRQLLRDLGADPDDLLTPPSG 425 Query: 372 ADPDTARFQVYERVQALLESTGR--PAVVVIDDVQWADSTSASCLAYIAGALRDHPVAIV 429 AD D ARF VY RV L R P +VV +DV WAD+ S L +++ A +A+V Sbjct: 426 ADADAARFVVYGRVLDALSEAARTRPLLVVAEDVHWADTASLRLLTHLSDAGACPGLALV 485 Query: 430 LTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISEDVVDHAEAQILAE 489 +T RDV E+ RLLA AR G+R LA+ L+ +V+ L N+IS +D AEA LA+ Sbjct: 486 VTARDVTGRPELDRLLAAAARRHGSRRLAVPPLTEGEVSELVNRISGQAIDDAEAAELAD 545 Query: 490 RTGGNPFFVSEYARLPRAER--GEIPVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDA 547 RT GNPFFV EYARLP +R G++PVAV+SVL +RLA LDP VL VLR AAVIGD +D Sbjct: 546 RTSGNPFFVCEYARLPAEDRAGGKVPVAVRSVLGQRLAVLDPAVLQVLRAAAVIGDVLDI 605 Query: 548 DVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQ 607 D +L +V ++ E ++V A Y FAH LLRD ++AG+ +LRRQ Sbjct: 606 D---LLGKVTRLDRDELADLLDEASDEHVIVQAAGTGRYMFAHALLRDEVVAGISSLRRQ 662 Query: 608 RLHAQVAEVL-------------AGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXXXXX 654 RLH +VAE L G+ +A++RRA HL AA PL + Sbjct: 663 RLHLRVAEALGLVDGGPVNGGSGGGSAGGEALSRRAAHLAAAWPLAESTDVFDACRAAAL 722 Query: 655 XXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLGYVE 714 +RW S+ AA WW ALD DR A + +RD + VA + A +RAGRG+TVL V+ Sbjct: 723 DAERRWQSEAAAHWWGQALDVLDR--SAGDLDIDRDEVLVARVSALARAGRGQTVLDVVD 780 Query: 715 RHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXXXXX 774 L +A+R R D+AG +A+ LLR+SG WPW GDDP LL L Sbjct: 781 AGLLDAVRRGRLDSAGRLAATLLRTSGSWPWAVYGDDPAPLLARLAGLETLVAADPAAHV 840 Query: 775 XXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERSHEI 834 Y PD V RA LAER D + LAD L+ R + +SG+ ER+ E Sbjct: 841 RVLAALAVGSAYDPDGSVPDLLGRRAIELAERIGDDEALADALLSRALAFSGIAERAAES 900 Query: 835 FEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRA 894 E + RL + H+ ++ D VIAH + ++ L D E H+R G +GS+ L+LP R Sbjct: 901 VELLNRLATVPHASAQIDEVIAHGLLYLAKTALGDPGSAE-HVRLGALGSDLLRLPASRV 959 Query: 895 QLRWMEAVLATWR-GDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIG------ 947 Q RW + LA WR D A + A +H +TELY +G LA + L E G Sbjct: 960 QFRWAQGSLALWRDDDLSTAAEIYHHAFALHRETELYESGVYHLALLALCWEQGRLDDPD 1019 Query: 948 GPVPAGFGV--TPA--DVERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQIW 1003 PVP V PA V RG G + ++ + +E W Sbjct: 1020 EPVPISPFVPWAPALTAVARGDPGADKLLAAEIAQVE-------------------PVTW 1060 Query: 1004 TNLGEAAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRG 1063 T +AH D GL L A L P +A IGQ G G VALA ARL AL G Sbjct: 1061 TTHARLTMLAHAVADLGLRSQVSTLTARLTPVAHCVANIGQCGFVGTVALALARLAALDG 1120 Query: 1064 DRARALEDLAKAEDVARRTGARPTLMRCALLACE 1097 D A L A +VA R L+RC L A E Sbjct: 1121 DLPAARGHLRTAVEVATRAQGVGALLRCRLFAAE 1154 >tr|A8L3H1|A8L3H1_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Frankia sp.] Length = 1161 Score = 327 bits (837), Expect = 8e-87 Identities = 338/1145 (29%), Positives = 453/1145 (39%), Gaps = 105/1145 (9%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP++V+ G P+D+G PKQRA+LA+LL A V+ V+ +I+ +W PPASATASLQ Sbjct: 5 VLGPVEVLLGGAPLDLGPPKQRALLALLLAAGDTVIPVETIIERLWDGQPPASATASLQV 64 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+SNLRR L D A+ +V Q PGY L A VD QF A A ++E R Sbjct: 65 YVSNLRRLLEPERDPRARATVLVTQAPGYVLRTGAAEVDARQFVAALGAARGSLEAGRPA 124 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRG D+RD W+ +A R ELR V+ R AL+ LGR A A Sbjct: 125 EALPALDAALALWRGDAYADVRDASWIRPEAGRLEELRQSAVEDRARALVELGRHDEAAA 184 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + L + PL +RA L L +YR GR EAL A L ELG+ PG EL L+ Sbjct: 185 DLEALTARHPLRERAWGLFALAIYRCGRPAEALAALRAARAHLAEELGVDPGPELAALEL 244 Query: 241 AILRQAPEL----------AAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQ-RGLLIGRKR 289 AILR P L AA P TG + G +GR Sbjct: 245 AILRHDPALAWAGGAHEPPAAQPAVSPTTGLDGPQPVLPDVSPAAAGAPEPSGPFVGRD- 303 Query: 290 EXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVSCPDERSTPPWW 349 E R +++ G PG+GKTRL E+ C W +CP+ P W Sbjct: 304 EALAALLAAIPAPARRGRVVLVDGEPGVGKTRLVAELGRRCGRLTAWGACPEHEVAPALW 363 Query: 350 PMRQLVRALGADADEVLEVPPHA--------------DPDTARFQVYERVQALLESTGRP 395 P Q +RA+ A +V VPP D AR ++YE V L + P Sbjct: 364 PWEQSLRAVAAARPDV-PVPPGVAALIDQRAQEPGGYDAAGARLRLYEGVAGYL-AAAAP 421 Query: 396 AVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNR 455 V+V+DD+ WAD +S LA++ GA V ++ T R +A A +AR G Sbjct: 422 LVIVLDDLHWADVSSLRLLAHVGGA-APRGVMVIGTFR-THEAGALADTRAALAR-SGCE 478 Query: 456 HLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARL----------- 504 L L L V L + A L RT GNPFF+ E RL Sbjct: 479 RLRLDGLDDAAVRELMRATTGTDPGPETASALRSRTAGNPFFIGELVRLRGPGRRGLAGT 538 Query: 505 ----PRAER--------GEIPVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPV 552 P +R G +P V+ VL RR+A L A+L AAV G DADVV Sbjct: 539 GAAGPATDRGAEQDTAQGALPDHVRDVLSRRVARLPEPAAALLATAAVAGGEFDADVV-- 596 Query: 553 LARVAKIXXXXXXXXXXXXXXERIVVNAHTGDG-YTFAHGLLRDHLMAGLPALRRQRLHA 611 A+VA ++ A G + F+H L+R+ L AG LRR LH Sbjct: 597 -AQVAGHTFETSLDLLDAALAAGLITEAGDRLGRFRFSHALVREALDAGHSRLRRAHLHR 655 Query: 612 QVAEV----LAGNPSDDAITRRAQHLVAAQPL--VDPXXXXXXXXXXXXXXTQRWSSDIA 665 + EV AG P + A+H +AA L R + + A Sbjct: 656 RYGEVTAERYAGRP--ERAGEVARHWLAAAELGAETARAATEHAARAARAAADRLAPEDA 713 Query: 666 AGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLGYVERHLTEALRNER 725 AG+WQ AL A + +A R L + ++ A AG+ L V+R L EA Sbjct: 714 AGYWQEALAAAE---LAGADRGTRLELLLGLVSARYAAGQLNDGLDVVDRALDEA----- 765 Query: 726 ADTAGLVASVLLRSSGGWPW--LAPGDDPGALLTLLQRXXXXXXXXXXXXXXXXXXXXXX 783 D L+ V + GG PW G D G L L+R Sbjct: 766 GDDPHLIVRVAEAAMGGSPWFPFPYGTDRGRLHRALERALGGLPTAGRDRALAVGCLAVL 825 Query: 784 CCYHPDPGVAAGHLDRAERLA--------ERTEDPDVLADVLMGRLITYSGVNERSHEIF 835 + G + AER + ++DP +L VL R +T +GV+ H Sbjct: 826 ESH-------VGRMAEAERAGALAVAAARDVSDDPALLPRVLHLRSLTVTGVDYAEHR-- 876 Query: 836 EWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRAQ 895 AR S E V AH + + L L P L Q Sbjct: 877 HTCARELASLPSTPPELLVGAHLTLVDNLVRFGHVARARAALGEADTMISRLGSPTLAYQ 936 Query: 896 LRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREIGGPVPAGFG 955 M A L + G+ +E+ + A G S +A V I + AG Sbjct: 937 AAIMRAALLAFSGELEESADVATAAVGRLGLAAQNGVESSFVANV-----IDRALQAGTL 991 Query: 956 VTPADV---ERGGQGMEAM-VHVALLTIERGPRAAAATRLDNWVNTDRGQIWTNLGEAAW 1011 AD G+EA+ +AL G A L R W L Sbjct: 992 ARLADTLARSLASTGIEALRGSLALALAAAGRPEAGRAALAEMRLPPRDYTW--LSAVVM 1049 Query: 1012 MAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQ-VGHAGPVALATARLHALRGDRARALE 1070 + AV G+ + E +A L+P + +A +G G V + GD A E Sbjct: 1050 RLNAAVALGVLDTVEEDIAHLRPHSGELASLGTCTAVVGAVDSHLGEAYLALGDHMAARE 1109 Query: 1071 DLAKA 1075 L A Sbjct: 1110 HLTAA 1114 >tr|Q0RLE9|Q0RLE9_FRAAA Tax_Id=326424 SubName: Full=Putative LuxR-family transcriptional regulator;[Frankia alni] Length = 1201 Score = 285 bits (729), Expect = 3e-74 Identities = 326/1189 (27%), Positives = 469/1189 (39%), Gaps = 139/1189 (11%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPL V G V +G P+QRAVLA L++A+G +VSVDRLI+ +W +PPA A SLQ+ Sbjct: 6 VLGPLAVEVGGRAVTLGGPRQRAVLARLVVARGELVSVDRLIEDLWRGEPPAKAVTSLQS 65 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+SNLRR L A+ ++ PGY L +AVD +F + ++A + Sbjct: 66 YVSNLRRLLEPQRPPRTPATVLLSASPGYALALGPEAVDAWRFESLLREARR---HSSAG 122 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRG ++ DE W D AR ELR+E A L G ++ A+ Sbjct: 123 TARALISEGLSLWRGEAFGEVADESWATADIARLAELRAEARQMLAAAELRAGNLAAAVR 182 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 L EPL + L L+L+ R +ALDA R + L ELGL PG EL L+ Sbjct: 183 LADALTRREPLREEGWRLLALSLWGGNRQADALDALRRARRQLTEELGLDPGPELARLEE 242 Query: 241 AILRQAPEL--AAWPRSPEWTG--------XXXXXXXXXXXXXXXXXGAQRGLLIGRKR- 289 AILRQ EL AA P S + + L GR++ Sbjct: 243 AILRQNRELLDAAMPPSAPTSAPPSAPPSEPPGSSQPDGSSPPLPAAASAAELFAGREQE 302 Query: 290 ---------EXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAE---VVWV 337 E G R ++SG PG GK+ L ++ VV Sbjct: 303 LAALADVAAEVTAAEVRAAGVGAGRARIALISGEPGAGKSALLRQVRHRLATTGWLVVTG 362 Query: 338 SCPDERSTPPWWPMRQLVRALGADA----------------DEVLEVPP----------- 370 CP+ PP W Q +R L ADA D+ + PP Sbjct: 363 QCPEAEGAPPAWAWLQALRVL-ADAAPPPAPLAELLAPLLSDQRPDHPPGPTPGHDLGSD 421 Query: 371 --------------------HADPDTARFQVYERVQALLEST-----GRPAVVVIDDVQW 405 D RF++++ V A L + P +++DD+ W Sbjct: 422 LGRAVGHRPGQKSTDTDRLDRVDASAGRFRLHQAVLAWLRTVADRTPAEPLAIILDDLHW 481 Query: 406 ADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTD 465 AD+ + + L +A + D P+ +++ RD + + LA +A R LAL LS Sbjct: 482 ADAETLALLGAVAAQVTDAPILLLVAYRDGEVGPALTEALAGLA-ARSPRRLALGGLSRA 540 Query: 466 DVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAE-----RGEIPVAVKSVL 520 +A + + VD LAERTGGNPF V E ARL +E E+P V+ VL Sbjct: 541 AIADVVGAVCRRPVDADTVLALAERTGGNPFHVRESARLLASEGALVALSEVPDGVRDVL 600 Query: 521 DRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNA 580 RRLA L +AVLR+AAV G D V VL A ++ Sbjct: 601 RRRLARLPAASVAVLRLAAVAGREAD---VEVLIDAANTDEDGVLDALDAGLIAGLLTEP 657 Query: 581 HTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLV 640 G F H L+RD L L LRR R+HA++ L D+ A H + A Sbjct: 658 APG-RVRFTHALVRDTLSTDLSLLRRTRMHARLGATLERLQPDNT-PALAHHYLRAASAA 715 Query: 641 DPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRS--ETERDA----LTV 694 +R++ D AA A+D +DR+PV + ET+RDA L Sbjct: 716 TARRAVDYAVRAAQAAERRYAHDTAADLLAGAVDGFDRLPVGDHACGETDRDAERVLLLG 775 Query: 695 AMLEAHSRAGRGRTVLGYVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAP--GDDP 752 +L A RAG +R + A E A L+ + + PW + G Sbjct: 776 RLLRAQVRAGAVAAARACRQRAVDHA---EAAGREDLLIAAFTAWTDPTPWQSRPYGTVD 832 Query: 753 GALLTLLQRXXXXXXXXXXXXXXXXXXXXXXCCYHPD--PGVAAGHLDRAERLAERTEDP 810 ++ +L R D P AA + A L+ +DP Sbjct: 833 APVVAVLTRLLERPGLDATVRCRLLDALTTELAGEDDARPRRAA---EEAVALSATQDDP 889 Query: 811 DVLADVLMGRLITYSGVNERSHEIFEWVARLEVLQH----------SRSREDSVIAHSVA 860 + A L + R+HE +W R V Q R A ++A Sbjct: 890 ALRA------LALTALARVRNHEP-DWPERDRVGQELIEIGVAYDLPAYRSFGNFARAIA 942 Query: 861 TMSAMLLADTELT--ERHLRAGVVGSEELQLPVLRAQLRWMEAVLATWRGDFDEAQRHHS 918 +AD+++T R + G+ + ++P + +A+LA GD D+A+R ++ Sbjct: 943 A-----VADSDVTGVRRFVADGMHLARLYRMPEAEGVGAYGQAMLAHIAGDLDDAERRYT 997 Query: 919 -IAAHVHEQTELYGAGSGLLAEVTLLREIGGPVPAGFGVTPADVERGGQGMEAMVHVALL 977 +A + ++ AG LLA TL G AD G M+ + L Sbjct: 998 ETSARMLRHGSIHAAGFQLLAVATLRLTQGRMAEF---AAHADDLLAAHG-PVMIDLLTL 1053 Query: 978 TIERGPRAAAATRLDNWVNTDRGQ-IWTNLGEAAWMAHLAVDYGLGEYAEPLLAVLQPFT 1036 + R R A ATRL R +++ L A A A+ A + L P Sbjct: 1054 ALARDGRLAEATRLHAAAPPLRPDFLFSTL--AVLRAEAAIAVADRPLARAMYGALLPLR 1111 Query: 1037 DRIAVIGQVGHA-GPVALATARLHALRGDRARALEDLAKAEDVARRTGA 1084 ++ + A PVA L A G A + +A VA R GA Sbjct: 1112 GQVPGALSLSLALRPVAHTLGALAAFLGRYPDAADHFRQARTVAERWGA 1160 >tr|D2ARR3|D2ARR3_STRRD Tax_Id=479432 SubName: Full=ATPase-like protein;[Streptosporangium roseum] Length = 1071 Score = 280 bits (715), Expect = 1e-72 Identities = 319/1116 (28%), Positives = 459/1116 (41%), Gaps = 103/1116 (9%) Query: 1 MLGPLQVV-HSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQ 59 +LGP+ VV GT +DIG +QRAVLA+ LA R V + R+IDA+W D PP A ++Q Sbjct: 5 VLGPVGVVADDGTSLDIGPYQQRAVLALCALAAPRPVGLSRMIDALWEDGPPPGAVNTVQ 64 Query: 60 AYISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRW 119 AY+S LRR G + +V +P GY LD P A+DLA+ + + Sbjct: 65 AYVSKLRRVFEPGRRRDVPPTILVSRPGGYALDIPESALDLARARGHAAEGGRMSAAGEH 124 Query: 120 VXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTAL 179 V WRG L D W E+ A E R + A LALGR ST Sbjct: 125 VVAGRRLRLALAEWRGDPLTDFAGASWAVEEIAHLTEFRLTLEEEVAEADLALGRGSTLT 184 Query: 180 AAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQ 239 + QL +A P +R L LY+AGR EAL ++L LGL P RE++ Sbjct: 185 GGLAQLVAAHPFRERLRVLGAHALYQAGRQAEALAVLAEGRRLLVEGLGLDPDPRSREME 244 Query: 240 TAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXX 299 IL Q P L R+ Q L+GR E Sbjct: 245 RRILAQDPALTPRVRATV---------------------RQGARLVGRDAE----VRVLD 279 Query: 300 XXXXGE-TRWLVLSGPPGIGKTRLAEEITD---GCDAEVVWVSCPDERSTPPWWPMRQLV 355 GE R ++L+G PGIGKT LAE+ + + VVW C D PP+WP Q V Sbjct: 280 LAVAGEGHRVVLLAGEPGIGKTSLAEQAAEAARSAERRVVWGRCWDGAGAPPFWPWTQAV 339 Query: 356 RAL-GADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCL 414 + L G D P T +FQ+YE LL GR +VV+DD+QWAD++S L Sbjct: 340 QELVGGDGG------PAQLAATGQFQLYEAFARLLNEHGR-VLVVLDDLQWADASSLRLL 392 Query: 415 AYIAGALRDHPVAIVLTVRDVDHTA--EVARLLATVARGDGNRHLALSSLSTDDVAALAN 472 ++A + +V T RD D A + R L + R R L L ++V Sbjct: 393 EFLASTRLCPELTVVATYRDTDVQAGGTLERALGALVRLPHVRRLLLRGFGEEEVREYLG 452 Query: 473 QISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAERGEIPVAVKSVLDRRLAGLDPGVL 532 + D AE + T GNPFF+ E +L GE P A+ V+ R+AGL P Sbjct: 453 RAGADPGRAAE---MGRLTAGNPFFLGEVLQL-----GETPQALSDVVRGRMAGLPPDTE 504 Query: 533 AVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYT--FAH 590 VL VAA++G D +L RV ++ R++V GDG T F H Sbjct: 505 EVLTVAALLGRDAATD---ILLRVLELPEDRVLDIVDAAVRARLLVE---GDGLTCRFVH 558 Query: 591 GLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXXXXXX 650 ++RD L LP LRR+RLHA++AEVL S +T A H + L+ P Sbjct: 559 DIVRDVLREALPPLRRRRLHARIAEVLE-ERSGTRLTEIAHHY--REGLLTPRMTGKAIG 615 Query: 651 XXXXXXTQ---RWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGR 707 Q +++ + A + A++ DR+P + R L + + EA + AG Sbjct: 616 YTRRAAAQAMAQFAHEDAVENLEQAIEMIDRLP--RTDDALRCDLLLDLAEAQAAAGTN- 672 Query: 708 TVLGYVERHLTEALRNERADTAGLVASVLLRSSGGWP---WLAPGDDPGALLTLLQRXXX 764 + H + E A+ G V + L R++ G+ +L ++ + L +R Sbjct: 673 -----IAAHASLEAAAEIAEGLGDV-NRLARAALGFSDPIYLGMYEEMTGIDRLAERIDR 726 Query: 765 XXXXXXXXXXXXXXXXXXXCCY------HPDPGVAAGHLDRAERLAERTEDPDVLADVLM 818 + VA H A RLA RT D LA L+ Sbjct: 727 VLASDLAEDSPWRARLLAAAAMTGFTVRSVEHSVAMAH--EAVRLARRTGDDRTLAAALI 784 Query: 819 G--RLITYSGVNERSHEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTER- 875 L+ + + + + + E+++ R D + + L T+R Sbjct: 785 ALEMLLRHDHDRDGARAVID-----EIVEIGRRTGDLATEWNGRECEYVELVAQGRTDRA 839 Query: 876 -HLRAGV-VGSEELQLPVLRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAG 933 L A + +E L+LP + + W A+ A G F +A + H + L + Sbjct: 840 ADLLAWLGETAERLRLPSMVSLAAWQRAIHAYLGGRFADALAAAEESGAAHPEGALGRSE 899 Query: 934 SGLLAEVTLLREIGGPVPAGFGVTPADVERGGQGMEAMVHV--ALLTIERGPRAAAATRL 991 + L + V + AG + AD G + E + L I+ G A Sbjct: 900 THLRSGVLHFFALRARGAAGEALALADEMLGRRPGEWSWRILRCLALIDLGGTDEARAVF 959 Query: 992 DNWVNTDRGQIWTNLGEAAWMAHLAVDYGLGEYAEPL--LAVLQPFTDRIA-VIGQVGHA 1048 V + T +G +A+ V L E L +A + DR+A G++ Sbjct: 960 AGLVR----DVSTPIGPD--LAYRFVSDALSEICAALGDVAAGRALYDRLAPSAGRLLGW 1013 Query: 1049 GPVALATARLHALRGDRARALEDLAKAEDVARRTGA 1084 L RL L GD RA L AE RR+GA Sbjct: 1014 SVTDLCLGRLALLEGDGERAEAHLRAAEAFVRRSGA 1049 >tr|D1VEW8|D1VEW8_9ACTO Tax_Id=298654 SubName: Full=Transcriptional regulator, SARP family;[Frankia sp. EuI1c] Length = 1101 Score = 277 bits (708), Expect = 8e-72 Identities = 242/787 (30%), Positives = 339/787 (43%), Gaps = 49/787 (6%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP+++V +G V +G PKQRA+LA+L + RV+ D L D +W +PPASA LQ Sbjct: 5 VLGPMELVVAGQAVPVGPPKQRALLALLAMHADRVLPADLLADRLWSGNPPASAQGGLQV 64 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 ++SNLRR L + +V GY L +D F + + E R Sbjct: 65 HVSNLRRRLEPDRRPGAAPTVLVSAADGYGLMTGGLDLDTRDFERLRSAGSGHLAEGRHQ 124 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRG D+R E W + R ++R + V+ TALL LGR + LA Sbjct: 125 DAADALAEALDLWRGDPYADVRSEGWAQPEIGRLEQVRLDAVEGLATALLELGRHTDVLA 184 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + PL +RA L L YRAGR ALD R ++L +ELG+ PG LR+L+ Sbjct: 185 RLDSFVREHPLRERAWELLALAHYRAGRQAAALDCLRRAREVLADELGIDPGPRLRDLEG 244 Query: 241 AILRQ--------APELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXX 292 A+LRQ P A+ PR P A + + +GR Sbjct: 245 AVLRQDAALLPAERPATASRPRRPP-----TPTPNQTTARGAARPAADQPVFVGRA-SAL 298 Query: 293 XXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVSCPDERSTPPWWPMR 352 + +++ G PG+GKT L D V W S PD + P WP Sbjct: 299 EVLREAAKTASAVGQVVLVDGEPGVGKTSLLRRFRATADVPVGWGSSPDHETAPALWPWE 358 Query: 353 QLVRALGADA------DEV-------LEVPPHADPDTARFQVYERVQALLESTGRPAVVV 399 +++R L A DEV LE P +D AR + +E V A L + G P VVV Sbjct: 359 RVLRDLAATTPRDTLPDEVDRFLTGGLEAIPSSDAQGARLRFFEAVGAFLAAAG-PVVVV 417 Query: 400 IDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLAL 459 ++D+ AD + L ++A R + +V T R + +A L A G R L L Sbjct: 418 LEDIHAADDATLRLLVHVASTARP-GLLLVATFRRHEASALTGTLSALSRL--GARRLGL 474 Query: 460 SSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAERGEIPVAVKSV 519 L ++V L ++S A+ L RT GNPFF++E AR E+P V V Sbjct: 475 DGLPAEEVRVLVRELSGRDPGSGRAEELRRRTAGNPFFLTELAR----AGDELPQGVLDV 530 Query: 520 LDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIV-V 578 + R+A L VL +AAV+GD +A VLA++A +V Sbjct: 531 VLHRVAALGEETARVLELAAVMGDEFEA---AVLAQIAGTTVGDLLRPLDATLGAGLVRE 587 Query: 579 NAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLA---GNPSDDAITRRAQHLVA 635 +++ GY FAH L+ D L++ L R R+H QVA VL G+ D A L A Sbjct: 588 SSYRLGGYEFAHALVTDALLSRRSRLWRARVHEQVAGVLTRVHGDRDDRAAVIARHWLAA 647 Query: 636 AQPLVDPXXXXXXXXXXXXXXT-QRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTV 694 A+ P +R + D AAG WQ AL A + +A ER L V Sbjct: 648 AELGAQPARMAMGSCARAARAALRRHAPDDAAGSWQEALAAAE---LAGAGAAERFELAV 704 Query: 695 AMLEAHSRAGRGRTVLGYVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGA 754 + A SR GR GY AL + A A + + G W G D A Sbjct: 705 GL--ADSRYAAGRFDEGYEAVEQALALAGTDPELAVRAADIAM-GHGVWVPFRYGLDVAA 761 Query: 755 LLTLLQR 761 + + R Sbjct: 762 VRDAMDR 768 >tr|C8X748|C8X748_NAKMY Tax_Id=479431 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Nakamurella multipartita] Length = 1150 Score = 274 bits (700), Expect = 6e-71 Identities = 305/1134 (26%), Positives = 451/1134 (39%), Gaps = 101/1134 (8%) Query: 15 DIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQAYISNLRRALRDGSD 74 D+G P+QR+VLA+LL+A+G+VVSVDRL++ +W + P A +LQAY+S+LRRAL Sbjct: 24 DLGGPRQRSVLALLLVARGQVVSVDRLVEDLWNGEAPPRAIGALQAYVSHLRRALEPDRA 83 Query: 75 TAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWVXXXXXXXXXXXXWR 134 A+ +V +PPGY + P DAVD +F A +QAA E R WR Sbjct: 84 PRTPATVLVSEPPGYAIRVPPDAVDAWRFEALVRQAA---EPDRQPQARALLQQALDLWR 140 Query: 135 GPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALAAVTQLRSAEPLSDR 194 GP + E W + R LR + A+L G A+ A L PL + Sbjct: 141 GPAYAEFGTESWAATEVGRLESLRIVARERWCEAVLTAGDADEAVLAAEVLTREYPLREE 200 Query: 195 ACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQTAIL-----RQAPEL 249 L + LY GR +AL A R +L +ELG+ PGA L E++ +L R AP Sbjct: 201 GWRLLAMGLYLTGRQADALAALRRARDILADELGMDPGAALLEVEADVLAQRLSRPAPAA 260 Query: 250 AAWP-----RSPEWTGXXXXXXXXXXXXXXXXXGA----QRGLLIGRKREXXXXXXXXXX 300 A P SP T + G +GR+ E Sbjct: 261 APVPVPISTASPTTTATTDSATATVARPAPSDEASGPAPTDGSFVGREDELNTLHTVAHD 320 Query: 301 XXXGETRWLVL-SGPPGIGKTRLAEEITDGCDAE---VVWVSCPDERSTPPWWPMRQLVR 356 R +VL +G G GK+ L E + A+ +V CP+ PP W ++VR Sbjct: 321 ARTRSDRRVVLVAGEAGAGKSALIERVAQELRADRWRLVLGRCPESAGAPPAWAWVEVVR 380 Query: 357 ALGADA-------------DEVLEVPPHADPDTARFQVYERVQALLESTGR--PAVVVID 401 AL AD DE +D RF + + L + R P V+V+D Sbjct: 381 ALAADVDPGPFAPALAPLLDETARPAAESDASFGRFLLGRALVGYLTAAARTGPLVIVLD 440 Query: 402 DVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSS 461 D+ DS + + L +A P+ +V R + + LA +A R LAL Sbjct: 441 DLHRGDSETVALLDTVASETAGVPLLMVAAYRPAEVQPGLRDALAGLAALPPTR-LALPG 499 Query: 462 LSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAER-----GEIPVAV 516 L T A L ++ D A L ERT GNPF+++E ARL +E ++P V Sbjct: 500 LDTRQAARLIRSVAGTQPDPATLAALVERTAGNPFYLAESARLLGSEGSLVAVSKVPEGV 559 Query: 517 KSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERI 576 + VL RR A L ++VLR+AAVIG +D D VL A++ + Sbjct: 560 RDVLRRRFARLPEVTVSVLRLAAVIGRDVDID---VLVHAAEVDEDTVLDALEAGVLAGL 616 Query: 577 VVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAA 636 ++ G FAH L+RD L P LRR R H ++A+ + DDA A H A Sbjct: 617 LIEPAPG-RVRFAHVLVRDTLYEDAPQLRRSRWHGRIADAVTAVHPDDA-AALAHHYHHA 674 Query: 637 QPLVDPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVP-----------VASRS 685 R++ + AA ++ AL RVP A Sbjct: 675 GTPATARRAVDAGVRAADMAVARYAHETAADLYEQALADLARVPEGPAGAGPAAGPAVGP 734 Query: 686 ETERDALTVAMLEAHSRAGRGRTVLGYVERHLTEALRNER-ADTAGLVASVLLRSSGGW- 743 D+ +E SR R + G R L R R AD AG V +L+RS W Sbjct: 735 GAGPDSRLAERIELLSRLSRSQLAAGAGVRALATRNRAIREADRAGRV-DLLVRSLTAWD 793 Query: 744 ---PWL-APGDDPGALLTLLQRXXXXXXXXXXXXXXXXXXXXXXCCYHPDPGVAAGHLDR 799 PW+ P + + + V + + Sbjct: 794 LPTPWINRPYGVVDEEMVATIKRALASTDPRPDDATRCRLLCALAGELDEAEVVLPYAEA 853 Query: 800 AERLAERTEDPDVLADVLMGRLITYSGVN---ERSHEIFEWVARLEVLQHSRSREDSVIA 856 AE +A R +DP VL + + +++ G ER+ I + + E+ + ++I Sbjct: 854 AEAIARRLDDP-VLLGLALHAKVSFIGPEHDAERAARIGDELR--EIGRRPGLAVFALIG 910 Query: 857 HSVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRAQLRWMEAV---------LATWR 907 H +A +A + D H+ Q+ L A+ RW +A+ +A Sbjct: 911 HYMAVRAAGIRGDHRTMAGHVD---------QIEELVARYRWRQALGLLSMHRGAIAHIA 961 Query: 908 GDFDEAQRHHSIAAH-VHEQTELYGAGSGLLAEVTLLREIGGPVPAGFGVTPADVERGGQ 966 G DE++ H++ A + L G LA +TL G +T D Q Sbjct: 962 GRLDESEAHYARGAESLRGSGALDAVGITTLAFLTLRMTQGRAAEFTDALTSVDT----Q 1017 Query: 967 GMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQIWTNLGEAAWMAHLAVDYGLGEYAE 1026 + + + + + R A A + R + L M + V A+ Sbjct: 1018 APDVIADLFAIPLLAAGRRAEAIEFRRGIRPVRRDFFHGL--LLTMRGIIV----AALAD 1071 Query: 1027 PLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARALEDLAKAEDVAR 1080 P+ A + D +A GQ+G G + A + + GD AR L D A R Sbjct: 1072 PVEAA-GVYADLLAYRGQLGGGGSGSYAVGPVDTVLGDLARVLGDREAARQFYR 1124 >tr|D2AZU1|D2AZU1_STRRD Tax_Id=479432 SubName: Full=ATPase-like protein;[Streptosporangium roseum] Length = 1114 Score = 271 bits (693), Expect = 4e-70 Identities = 327/1170 (27%), Positives = 461/1170 (39%), Gaps = 139/1170 (11%) Query: 1 MLGPLQVVHS--GTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASL 58 +LGP+ V HS G VD+G P+ RAVLA LLLAQG VVS D LID ++ PPASA +SL Sbjct: 5 VLGPVGV-HSDGGVQVDLGGPRPRAVLARLLLAQGAVVSADTLIDDLYSGAPPASALSSL 63 Query: 59 QAYISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQR 118 +Y+SNLRR + G ++ QPPGY L VD +FT + E + Sbjct: 64 HSYVSNLRRIIEPGRSPRTPPLLLLGQPPGYLL--ATTNVDAIRFT----KLVTRSESRP 117 Query: 119 WVXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTA 178 WRG + DE W D +R ELR V+ R ALL LGR Sbjct: 118 PGEVLVSLDEALRLWRGQPYGEFADETWAVTDVSRLRELRLVAVERRAQALLDLGRPQAV 177 Query: 179 LAAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHA-QMLDNELGLVPGAELRE 237 + + +A PL +R WL + LYR+GR +AL A RHA +L +LGL PG ELR Sbjct: 178 ITHLETEAAAHPLRERLWWLLAVALYRSGRQADAL-AVLRHAGNLLAEQLGLDPGPELRA 236 Query: 238 LQTAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXX 297 L+ ILR + L +P T + LL+GR+R+ Sbjct: 237 LENDILRHSDSLT----NPLLTSTAVSVPVPPQ--------SPPRLLVGRERQLSELKML 284 Query: 298 XXXXXXGETRWLVLSGPPGIGKTRLAEEITDGC---DAEVVWVSCPDERSTPPWWPMRQL 354 +SG PGIGKTRL E D C V+W +C P WP Q+ Sbjct: 285 PIRASRNGVAVAAVSGEPGIGKTRLLEVFRDQCADLGYVVLWGNCHSMEGAPALWPWLQV 344 Query: 355 VR------------ALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDD 402 +R AL DE + A R QV R + T +P V+++DD Sbjct: 345 LRTLDEIWPPPDRQALAGFLDEEMPSGSTAAALLHRNQVIARWLTVTAQT-QPLVIILDD 403 Query: 403 VQWADSTSASCLAYIA----GALRDHPVAIVLTVRDVD------HTAEVAR--------- 443 + WAD S + L +A G + P+ +V R+ H + R Sbjct: 404 LHWADPASLALLRDVAMLAGGEAANVPLTLVAAFRETAFRETAIHGTALPRGSFHLSLDG 463 Query: 444 LLATVARGDGNRHLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYAR 503 LL +AR D R + L+ L ++V A+A+ + + +D + A+ L+ERTGGNPFFV E AR Sbjct: 464 LLGELARYDLLR-IRLTGLEVEEVRAIASAMGAE-MDESSAERLSERTGGNPFFVRESAR 521 Query: 504 LPRAERG--EIPVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXX 561 L R +P AV ++ L L VL VAA+IG D VV + ++I Sbjct: 522 LLAQGRDLEAVPEAVADLIRWWLGRLGAQAGEVLGVAALIGRDFDPAVVAEVCETSEIGW 581 Query: 562 XXXXXXXXXXXXERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNP 621 ++V FAH L+R+ L+ +P LR+ +H V L+ P Sbjct: 582 VEVYDTLDRTARAGLIVPGEV--SMAFAHDLVRETLVREIPPLRKAVIHQAVMTALSFRP 639 Query: 622 SDDAITRRAQHLVAAQPLVDPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPV 681 D +T A H V A P + R + + AA WW A+ A+ Sbjct: 640 GVD-VTVIAHHAVEAGPAA-YADATRWAIAAAEQASLRLAYEEAAVWWGRAVVAHG---A 694 Query: 682 ASRSETERDALTVAMLEAHSRAGRGRTVLGYVERHLTEALRNERADTAG----LVASVLL 737 + E L + + A AG V+G + +A+R AD G L A L Sbjct: 695 CAGDPVEHVELLLRQVRALLEAG---DVIG-ARQARAKAVR--AADRVGGNSELTARALT 748 Query: 738 RSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXXXXXXXXXXXXXXCCYH----PDPGVA 793 W A L L+ R DP Sbjct: 749 ALDAPAIWTLRDLYGAAELWLVDRFEAALRALPEADSHERALLLGGLAQELHGTDDP--- 805 Query: 794 AGHLDRAE--RLAERTEDPDVLADVLMGRLITYS---------GVNERSHEI-------- 834 GH AE +A R DP +L +L R ++ + E HE+ Sbjct: 806 RGHAFSAEAVAMARRLGDPYLLMRMLNARHLSLPQPLHIPELLELTEELHELALRTRMPG 865 Query: 835 FEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQLPVLRA 894 FE +A++ H D A + A ++L E L LP R Sbjct: 866 FELLAQMMFAHHRLELFDLAAADAAAARCDVML-----------------ERLSLPWPRF 908 Query: 895 QLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLR-------EIG 947 Q G FD+A+ + A + + AG + +LR E G Sbjct: 909 QHTIWRITRLVLSGRFDDAENLYGEAERQATRIGYWYAGGVVAIGRLILRYNQGTIAEAG 968 Query: 948 GPVPAGFGVTPADVERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQIWTNLG 1007 + A GV P+ + V L + R A A + W W ++ Sbjct: 969 PLIDAITGVHPS--------ADHDARVLQLCAQGRVREARALAANGWPAPPPDWSWLSMT 1020 Query: 1008 EAAWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRAR 1067 A A+ G + + L P++ RI+V+ V GPV A L + GD A Sbjct: 1021 CLQGAAQAAI--GDLPACQVTYSALLPYSGRISVVSAVVCMGPVDWYLALLASALGDNAA 1078 Query: 1068 ALEDLAKAEDVARRTGARPTLMRCALLACE 1097 A L +A + G R +CE Sbjct: 1079 ASRHLETLTRLAGQNGLMWWRDRARSASCE 1108 >tr|D2AU88|D2AU88_STRRD Tax_Id=479432 SubName: Full=ATPase-like protein;[Streptosporangium roseum] Length = 1121 Score = 259 bits (662), Expect = 2e-66 Identities = 207/659 (31%), Positives = 298/659 (45%), Gaps = 51/659 (7%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LG G PV +G P+QR VLA+L+ A+G+VV VDR+I+ +W +PPA A SLQA Sbjct: 6 VLGSFGAEVGGEPVPLGGPRQRGVLALLVAARGQVVPVDRMIEDLWRGEPPARALMSLQA 65 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+SNLRR L G A +V PGY L P ++VD +F G A+ V + R Sbjct: 66 YVSNLRRTLEPGRPPRTPARLLVSASPGYALRLPPESVDAWRF-EGLLDQARTVTDPR-- 122 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 W+GP ++ DE W + AR ELR + + L +G + + Sbjct: 123 VAQARLAEALGLWQGPAFAEVADEPWAGAETARLNELRLVATELHVATGLRIGDPAAVVP 182 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 +L EPL + LH L L+ +GR +AL R + ELGL PG +L L+ Sbjct: 183 EAERLTRDEPLREEGWRLHALALWSSGRQADALATLRRARGIFAEELGLDPGPDLTALEE 242 Query: 241 AILRQAPEL--AAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXX 298 AIL Q ++ A+ P P + +GR+ + Sbjct: 243 AILTQRTDVMRASVPPPP------------PTAPLPRPAPSIEAPFVGREAQLSALVTAA 290 Query: 299 XXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAE---VVWVSCPDERSTPPWWPMRQLV 355 R +++G G+GK+ L E + + + V CP+ S PP W + + Sbjct: 291 AEAAADGARIALVTGEAGLGKSTLLEHLGRRLERDGWLVAVGRCPEVDSAPPAWGWTEAL 350 Query: 356 RAL------GADADEVLEV-----PPHADPDTARFQVYERVQALLE--STGRPAVVVIDD 402 RA+ G AD++ + P D RF++ + V L +T RP VV+DD Sbjct: 351 RAVAATTSPGGFADDLAPLLTDTGPADYDATAGRFRLRQSVWKWLAAVATERPVAVVLDD 410 Query: 403 VQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSL 462 + WAD A+ L + G LR +++ D + + LA++AR R LAL L Sbjct: 411 LHWAD---AATLELLGGGLRMRAPILIVAAYRADESGHLTETLASLARATPLR-LALPGL 466 Query: 463 STDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAE-----RGEIPVAVK 517 + + VA L +E D +AERTGGNPF+V E ARL E E+P V+ Sbjct: 467 NDEAVAELVR--TECEADEEAIAGIAERTGGNPFYVRESARLLNGEGALVALSEVPEGVR 524 Query: 518 SVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIV 577 VL RRLA L G +++LR+AAV G D VL + A ++ Sbjct: 525 DVLRRRLARLPEGGVSILRLAAVAGRESSVD---VLVKAADTDEDGVMDALDAGVIAGLL 581 Query: 578 VNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAA 636 G F H L+RD L+ L LR R+HA++A L G D I A H A Sbjct: 582 DEPGPG-LIRFVHALVRDTLVTDLSRLRTARMHARIAAALEGT---DDIAALAHHYARA 636 >tr|D1S856|D1S856_9ACTO Tax_Id=644283 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Micromonospora aurantiaca ATCC 27029] Length = 1030 Score = 255 bits (651), Expect = 3e-65 Identities = 210/641 (32%), Positives = 284/641 (44%), Gaps = 44/641 (6%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP +VV G V +G PKQ+A+LA+ LL R V+ D L+DA+W PPASA +L+ Sbjct: 5 VLGPPEVVRHGRVVPLGGPKQQALLALFLLRPNRFVAADWLVDALWDARPPASARTTLRT 64 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y++ LRRA+ + A + P GY L ADAVD +F +AA A+ + Sbjct: 65 YVAGLRRAVEPQRSHREPARVLRSHPGGYELRVDADAVDAIRFAGLVDRAADALAAGQAA 124 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRG L + D V +AAR ELR + R+TA +A GR +T L Sbjct: 125 AAERTYTEALALWRGEPLAGVADLTAVRPEAARLAELRLSAEEGRLTAAVAAGRHATLLP 184 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + + SA PL + A ML LYR+GR EAL + ++L E GL PG ++R + Sbjct: 185 ELRRFVSAHPLREGARAQLMLALYRSGRQTEALAVFDEGRRILAGEYGLDPGEQIRAVHR 244 Query: 241 AILRQA--PELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXX 298 IL QA P+ + SP TG G L+GR E Sbjct: 245 LILEQAVPPDRS----SPADTGGPATAGAVPERDG--------GPLVGRDAELERLRDTL 292 Query: 299 XXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAE---VVWVSCPDERSTPPWWPMRQLV 355 R L L G GIGKT LA + A VVW CPD PP+W Q+V Sbjct: 293 DAATGQSGRVLTLVGEAGIGKTSLAAALGARAAATGVPVVWGRCPDVGQAPPFWLWSQVV 352 Query: 356 RAL---------------GADADEVLEVPPHA---DPDTARFQVYERVQALLESTGRPA- 396 RAL G A P DP TARFQVYE V L+ + R Sbjct: 353 RALVAMPQTGATGSAGRLGGFAAGAPTGPADGRGLDP-TARFQVYEAVAELVHAAARERG 411 Query: 397 -VVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNR 455 +VV+DD+ AD S L ++A AL +V T+R D + +A +ARG G Sbjct: 412 LLVVLDDLHAADPDSLLLLRFLAAALPASRALVVATLRPYDDDPALVATVAELARGSGFG 471 Query: 456 HLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEY--ARLPRAERGEIP 513 + L+ L VA L + + L RTGGNPFF++E +R E+P Sbjct: 472 QVRLAGLDASAVADLVRDRTGEAPPEPVVTRLVTRTGGNPFFLTELLRSRTGPGAGAELP 531 Query: 514 VAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXX 573 +++ + RLAGL L + V G +D + VLA Sbjct: 532 PSIRDTVRLRLAGLPGPTRRCLDLLGVAGHDLD---LAVLAAALDSTPEAVADDLAPAYP 588 Query: 574 ERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVA 614 +VV G F H L+ + A L RR LHA++A Sbjct: 589 AALVVETGPG-ALAFRHPLIAEVTYAELVPPRRAALHARLA 628 >tr|C1ATS5|C1ATS5_RHOOB Tax_Id=632772 SubName: Full=Putative regulatory protein;[Rhodococcus opacus] Length = 1098 Score = 254 bits (648), Expect = 7e-65 Identities = 306/1118 (27%), Positives = 442/1118 (39%), Gaps = 106/1118 (9%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LG L+ VD+G P+QRAVLA+LL+A+G VV VDRL+D +W PPA A +LQA Sbjct: 12 VLGTLEAEDESGAVDLGGPRQRAVLALLLVARGEVVPVDRLVDDLWHGAPPARAVGALQA 71 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 YISNLRRAL ++ +V + PGY L P AVD +F + AA Sbjct: 72 YISNLRRALEPHRAPRADSTVLVSRAPGYALTLPPSAVDAWEFENLVRSAAGT------- 124 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP ++ E W + AR ELR + + A +A G + A+ Sbjct: 125 -GPADLERALSLWRGPAFAEVAGEHWALAEIARLEELRVVARERVVAADVASGDAAGAVL 183 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 L PL + L L L+R+GR +AL A L +ELGL PG L EL+ Sbjct: 184 DAQSLTRDHPLREEGWRLLALALHRSGRQADALAALREARDRLVSELGLDPGPGLTELER 243 Query: 241 AILR----QAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXX 296 IL AP AA P A +GR E Sbjct: 244 RILTGTVPSAPAPAAVP----------------------VDTAPDPWFLGRTAE---LAT 278 Query: 297 XXXXXXXGETRWLVLSGPPGIGKTRLAEEI---TDGCDAEVVWVSCPDERSTPPWWPMRQ 353 T ++L G G GK+ L G +V CP+ PP W + Sbjct: 279 LTGLMSDSGTPVVLLGGDAGSGKSSLLRRFRRTLRGAKWQVAVGRCPEVDGAPPAWAWVE 338 Query: 354 LVRAL------GADADEVLEV----PPHA---DPDTARFQVYERVQALLEST--GRPAVV 398 ++RAL G +AD + + HA D + RF ++ V L + P V Sbjct: 339 ILRALRETVDPGTEADALAPLLADDRSHATRPDDPSGRFLLHRAVADYLGAVRDHGPLAV 398 Query: 399 VIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLA 458 V+DDV AD + S L + A + P+ ++L R + A + A +A R + Sbjct: 399 VLDDVHRADEDTLSILVRL--AQQRSPILLILAFRPDEIDANLENCFADLASLQPTR-IR 455 Query: 459 LSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAE-----RGEIP 513 L L ++ A L +S D + LA+RTGGNPF++ E ARL +E E+P Sbjct: 456 LGGLGPEESAELIRHVSGRDPDPGTLRALADRTGGNPFYLQESARLLDSEGELVATSEVP 515 Query: 514 VAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXX 573 V+ VL RR+A L ++VLR+AAV+G D D VL R A++ Sbjct: 516 EGVRDVLRRRIARLPELTVSVLRLAAVVGRESDID---VLTRAAEVDEDAVFDALESGVI 572 Query: 574 ERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAG-NPSDDAITRRAQH 632 ++ G F H L+RD L + L LRR R HA+V L P D + A H Sbjct: 573 AGLLGEPRAGT-VRFTHALVRDTLYSDLTRLRRSRWHARVGSALEELRPHD--VAALAHH 629 Query: 633 LVAAQPLVDPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPV-ASRSETERDA 691 A R++ D G+ AL A DR+P A+ S ER Sbjct: 630 FTEALSAATARQALDHNVAAAAQAADRYAHDAEIGFLNDALRAADRLPPDAAASVDERVD 689 Query: 692 LTVAMLEAHSRAGRGRTVLGYVERHLTEALRNERADTAGLVASVLLRSSGGWPWL--APG 749 L + AG G +R L A +R D L VL PW+ G Sbjct: 690 LLTELSRTQLAAGIGLDGARSRKRALELARDADRTD---LAIRVLAFVDTPTPWINRRYG 746 Query: 750 DDPGALLTLLQRXXXXXXXXXXXXXXXXXXXXXXCCY--HPDPGVAAGHLDRAERLAERT 807 + A++ L++ H G A + AE LA Sbjct: 747 EVDTAVVDLIEALLRDEILEPAVRCRLLVTLVHEIGAEDHERTGTA---VREAEVLARDL 803 Query: 808 EDPDVLADVLMGRLITYSGVNERSHEIFEWVARLEVLQ---HSRSREDSVIAHSVATMSA 864 +DP +L VL ++G + + + V E+L+ ++ +++ H + A Sbjct: 804 DDPVLLGLVLCA---VHAGTGSPTSTLGDHVIGEELLRIGDRTQLPVFTMLGHHLLAEIA 860 Query: 865 MLLADTELTERHLRAGVVGSEELQLPVLRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVH 924 D E H+ ++ + +A + ++A GD D A+RH+ + Sbjct: 861 SGNGDIPAIEHHMCLQSELADRYRFQQAQATRQMNRGMVAHLTGDLDAAERHYERGHELM 920 Query: 925 EQTELYGAGSGLLAEVTLLREIGGPVPAGFGVTPADVERGGQGMEAMVHVALLTIERGPR 984 + L LA TL G F A V+ + A +H L P Sbjct: 921 TRAGLDADSVFALAVFTLRLTEGR--AGEFEAVIASVDSAATDVLADLHALALLGNGKPE 978 Query: 985 AAAATRLDNWVNTDRGQIWTNLGEAAWMAHLAVDYGLGE--YAEPLLAVLQPFTDRIAVI 1042 A R + + R + +L V GLGE A + A L P++ Sbjct: 979 QARQVR--SHLRPVRRDFFHSL---MMSLRGIVVAGLGERDEAASVHAELSPYS------ 1027 Query: 1043 GQVGHAGPVALATARLHALRGDRARALEDLAKAEDVAR 1080 GQ+G A A + + GD LE L + AR Sbjct: 1028 GQIGGGDTAAFAVGPVDTILGD----LEVLLGRPEAAR 1061 >tr|Q0S6M7|Q0S6M7_RHOSR Tax_Id=101510 SubName: Full=Probable transcriptional regulator;[Rhodococcus sp.] Length = 1094 Score = 252 bits (643), Expect = 3e-64 Identities = 305/1132 (26%), Positives = 438/1132 (38%), Gaps = 130/1132 (11%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LG L+ VD+G P+QRAVLA+LL+A G VV VDRLID +W PP A +LQA Sbjct: 6 VLGTLEAEDESGTVDLGGPRQRAVLALLLVAHGEVVPVDRLIDDLWHGAPPPRAVGALQA 65 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 YISNLRRAL ++ +V + PGY L P VD +F + AA Sbjct: 66 YISNLRRALEPHRAPRADSTVLVSRAPGYALILPPSGVDAWEFETLIRSAADT------- 118 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP ++ E W + AR ELR + + A +A G + A+ Sbjct: 119 -GRADLEHALSLWRGPAFAEVAGEHWALAEIARLEELRVVARERLVAAAVASGDAAGAVL 177 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 L PL + L L L+R+GR +AL A L NELGL PGA L EL+ Sbjct: 178 DAQALTRDHPLREEGWRLLALALHRSGRQADALAALREARGRLANELGLDPGAALTELER 237 Query: 241 AIL--------RQAPELAAWPRSPE-WTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREX 291 IL AP +PE W +GR E Sbjct: 238 QILTGTVPSPPAPAPAAGRVDTTPETW-------------------------FLGRTEE- 271 Query: 292 XXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDA---EVVWVSCPDERSTPPW 348 T ++L G G GK+ L A +V CP+ PP Sbjct: 272 --LASLTDLMTDAGTPVVLLGGDAGSGKSSLLRRFRRTLHAAGWQVAVGRCPEVDGAPPA 329 Query: 349 WPMRQLVRAL------GADADEVLEV-------PPHADPDTARFQVYERVQALLEST--G 393 W +++RAL GA+ D + + D + RF ++ V + + Sbjct: 330 WAWVEILRALRETVDPGAETDALAPLLSDDRSRAARPDDPSGRFLLHRAVADYIGTVRDH 389 Query: 394 RPAVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDG 453 P VV+DDV AD + S L + A + HP+ ++L R + + A +A Sbjct: 390 GPLAVVLDDVHRADEDTLSILVRL--AQQRHPILLLLAFRPDEVDPNLESCFADLASLQP 447 Query: 454 NRHLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAE----- 508 R + L L DD A L ++ D + LA+RTGGNPF++ E ARL +E Sbjct: 448 TR-IRLGGLGPDDSAELIRHVAGRDPDPGTLRALADRTGGNPFYLQESARLLASEGELVA 506 Query: 509 RGEIPVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXX 568 E+P V+ VL RR+A L ++VLR+AAV+G D D VL R A++ Sbjct: 507 TSEVPEGVRDVLRRRIARLPELAVSVLRLAAVVGRESDID---VLTRAAEVDEDTVFDAL 563 Query: 569 XXXXXERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAG-NPSDDAIT 627 ++ G F H L+RD L + L LRR R HA+V L P D + Sbjct: 564 ESGVIAGLLGEPRAGT-VRFTHALVRDTLYSDLTRLRRSRWHARVGTALEELRPHD--VA 620 Query: 628 RRAQHLVAAQPLVDPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPV-ASRSE 686 A H A R++ D G+ AL A DR+P A+ S Sbjct: 621 ALAHHFTEALSAATARQALDHNVAAAAQAADRYAHDAEIGFLDNALRAADRLPPDAAASV 680 Query: 687 TERDALTVAMLEAHSRAGRGRTVLGYVERHLTEALRNERADTAGLVASVLLRSSGGWPWL 746 ER + + AG G + G R+ AL + A L L PW+ Sbjct: 681 DERVEILTELSRTQLAAGIG--LAGSRSRNRALALARD-AGRTDLAIRALAFVDTPTPWI 737 Query: 747 --APGDDPGALLTLLQRXXXXXXXXXXXXXXXXXXXXXXCCYHPDPGVAAGHLDRAERLA 804 G+ A++ ++ D + AE LA Sbjct: 738 NRRYGEVDAAVVDQIEALLRDEVLEPAVRCRLLVTLVHEIGAE-DHERTGSAVREAEALA 796 Query: 805 ERTEDPDVLADVLMGRLITYSGVNERSHEIFEWVARLEVLQ---HSRSREDSVIAHSVAT 861 +DP +L VL ++G + + V E+LQ ++ +++ H + Sbjct: 797 RDLDDPVLLGLVLCA---VHAGTGSPTSTLGHHVIGDELLQIGDRTQLPVFTMLGHHLLA 853 Query: 862 MSAMLLADTELTERHLRAGVVGSEELQLPVLRAQLRWMEAVLATWRGDFDEAQRHHSIAA 921 A D E H+ ++ Q +A A++A GD A+RH+ Sbjct: 854 EIASGNGDIPAIEHHMGIQSELADRYQFQQAQATREMSRAMVAHLTGDLATAERHYVRGH 913 Query: 922 HVHEQTELYGAGSGLLAEVTLLREIG--GPVPAGFGVTPADVERGGQGMEAMVH-VALLT 978 + + L LA TL G G + A V+ + A +H +ALL Sbjct: 914 ELMTRAGLDADSVFALALFTLRLTEGRAGELEA----VIETVDSAAMDVIADLHALALLG 969 Query: 979 IERGPRAAAATRLDNWVNTD---------RGQIWTNLGEAAWMAHLAVDYGLGEYAEPLL 1029 + RA R V D RG + LGE + A + Sbjct: 970 NGKPDRAREVRRHLRPVRRDFFHSLMMSLRGIVVAGLGER-------------DEAPSVH 1016 Query: 1030 AVLQPFTDRIAVIGQVGHAGPVALATARLHALRGDRARALEDLAKAEDVARR 1081 A L P++ GQ+G A A + + GD LE L + D ARR Sbjct: 1017 AELSPYS------GQIGGGDTAAFAVGPVDTILGD----LEMLLRRPDDARR 1058 >tr|D0L2U0|D0L2U0_GORB4 Tax_Id=526226 SubName: Full=Transcriptional activator domain protein;[Gordonia bronchialis] Length = 1090 Score = 251 bits (640), Expect = 6e-64 Identities = 301/1106 (27%), Positives = 432/1106 (39%), Gaps = 102/1106 (9%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 M G ++V G DI + ++RAVLA L+ A G VVS DRLID +W +PP A A LQ Sbjct: 19 MSGTVRVEVDGVVADIKSRRERAVLARLVAADGHVVSTDRLIDDLWNGEPPPKALAGLQV 78 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQF-----TAGCQQAAQAVE 115 ++SNLRR L G A +V + PGY L P DAVDL +F T AA+ Sbjct: 79 HVSNLRRILEPGRAPRTPARILVSEAPGYALRLPRDAVDLWRFDDLVTTPADDPAARYAN 138 Query: 116 EQRWVXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRV 175 WRG ++W + R GE+ V+ R A L LGR Sbjct: 139 SD----------AALALWRGEPFGAHATDEWARAETVRLGEVHLTAVEQRAAAALDLGRP 188 Query: 176 STALAAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAEL 235 + +AA+T L + P + L L YR GR +AL L +ELG+ PG L Sbjct: 189 TEVVAALTGLTDSHPTREEIFRLLALAQYRLGRQADALATLRTVRDYLSDELGVDPGPAL 248 Query: 236 RELQTAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXX 295 R+L+TAIL+ L A R P GA GR+ E Sbjct: 249 RDLETAILQHDRALDA-ARQP-------TAASVPTPKPADAAGAGIEESAGREVELEKLM 300 Query: 296 XXXXXXXXGETRWLVLSGPPGIGKTRLAEEIT---DGCDAEVVWVSCPDERSTPPWWPMR 352 R + ++ G GK+ LA + V CP+ P W R Sbjct: 301 MHADTVRRTGLRIVWVTAEAGGGKSTLARGLVRRLRSAGWPVAVGHCPEVDGAPTAWAWR 360 Query: 353 QLVRALGAD--ADEVLEVPPHADPDTARFQVYERVQAL-LESTGRPAV-VVIDDVQWADS 408 +++ ALG AD DP T +V QAL S R + +V+DDV ADS Sbjct: 361 EIIDALGHSHTAD---------DPFTIAREVVAACQALSATSVDRYGILLVLDDVHRADS 411 Query: 409 TSASCLAYIAGALRDHPVAIVLTVR----DVDHTAEVARLLATVARGDGNRHLALSSLST 464 + L L + P+ ++ T R +V+ A A L++ A LALS LS Sbjct: 412 ATLQVLRQAVTWLAEQPILVLATYRPSEAEVELQASGAALISVTA-----DLLALSGLSD 466 Query: 465 DDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARL-----PRAERGEIPVAVKSV 519 D + LA D VD A ++L RT GNP FV E A+L PR + +P V+ V Sbjct: 467 DGIRELAASAGLDPVDDATVELLRSRTDGNPLFVRELAKLVASRGPRDAQRAVPSGVRDV 526 Query: 520 LDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVN 579 L RR L + +LR+AA+ G D + +A + VV Sbjct: 527 LLRRAERLPENAVTLLRLAAMCGREAAIDTL-----IALWPDDSGGEDAVLDAIDSAVVA 581 Query: 580 ---AHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAA 636 T D F H L+R+ + +PALRR+RLH +V E L + SD ++ A H Sbjct: 582 GLLTATVDRVVFNHVLMREAIYDAIPALRRRRLHWRVLEHLR-STSDASVDELAHHAALG 640 Query: 637 QPLVDPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAY-------DRVPVASRSETER 689 P R+ +D AG W++A+D + D + + + Sbjct: 641 ---ASPATTSEALSIVEDAARHRFGADDTAGLWRSAVDLHAMAGHDRDSAGASDKGAMVQ 697 Query: 690 DALTVAMLEAHSRAGRGRTVLGYVERHLTEALRNERA---DTAGLVASVLLRSSGGWPWL 746 + AHS V+G EAL R+ D L A R+ W Sbjct: 698 SLCNLVTALAHS------GVIGEARSRREEALTLARSVGDDHLVLTALTCWRTPSIWT-- 749 Query: 747 APGDDPGALLTLLQRXXXXXXXXXXXXXXXXXXXXXXCCYHP--DPGVAAGHLDRAERLA 804 P LL + + AA A LA Sbjct: 750 ---TRPDRLLDPVMSTAIREMLPHTTGADRAWLLVTAVAEFEGNEERFAAQCSQEALDLA 806 Query: 805 ERTEDPDVLADVLMGRLITYSGVNERSHEIFEWVARLEVLQHSRSRED-SVIAHSVATMS 863 +DP++L L R+ T G ++ +H + + S D + AH ++ Sbjct: 807 RTVDDPELLCAALNSRVHTAIGPDD-NHLLAGFAEEFVATAESVGNTDYAAAAHFFMAVT 865 Query: 864 AMLLADTELTERHLRAGVVGSEELQLPVLRAQLRWMEAVLATWRGDFDE-AQRHHSIAAH 922 D T R + + + ++ L AVL RGD D+ A +H+I A Sbjct: 866 RAGQTDLVATHREMSLAMQSATSGKVAELVVVQATFGAVLDVLRGDLDKAAATYHAIGAQ 925 Query: 923 VHEQTELYGAGSGLLAEVTL---LREIGGPVPAGFGVTPADVERGGQGMEAMVHVALLTI 979 + G L+ E+++ +G + AG ++ A V+ A L I Sbjct: 926 LAAAGNPAGEVFTLIEELSIGWYRGSVGHLIDAGL----RNIYETAPESIAWVYAAAL-I 980 Query: 980 ERGPRAAAATRLDNWVNTDRGQIWTNLGEAAWMAHLAVDYGLGEYAEPLLAVLQPFTDRI 1039 + G A T T R WT L A+ A+ + G+ E A L A L+ ++ I Sbjct: 981 DAGRLDEARTVAARGYRTVRDYYWTAL--EAFHAYALIKLGMAEEAAELYAELKDWSGSI 1038 Query: 1040 AVIGQVGHA-GPVALATARLHALRGD 1064 A + GP+ A L L GD Sbjct: 1039 AGLTSTSVVFGPMDDLLAGLAELCGD 1064 >tr|D3CDG5|D3CDG5_9ACTO Tax_Id=648999 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Micromonospora sp. L5] Length = 1030 Score = 249 bits (635), Expect = 2e-63 Identities = 207/641 (32%), Positives = 281/641 (43%), Gaps = 44/641 (6%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP +VV G V +G PKQ+A+LA+ LL R V+ D L+DA+W PPASA +L+ Sbjct: 5 VLGPPEVVRHGRVVPLGGPKQQALLALFLLRPNRFVAADWLVDALWDARPPASARTTLRT 64 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y++ LRRA+ + A + P GY L ADAVD +F +AA A+ + Sbjct: 65 YVAGLRRAVEPHRSHREPARVLRSHPGGYELRVDADAVDAIRFAGLVDRAADALAAGQAA 124 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRG L + D V +AAR ELR + R+TA +A GR +T L Sbjct: 125 AAERTYTEALALWRGEPLAGVADLAAVRPEAARLAELRLSAEEGRLTAAVAAGRHATLLP 184 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + + SA PL + A ML LYR+GR EAL + ++L E G+ PG + R + Sbjct: 185 ELRRFVSAHPLREGARAQLMLALYRSGRQTEALAVFDEGRRILAGEYGIDPGEQTRAVHR 244 Query: 241 AILRQA--PELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXX 298 IL QA P+ + SP TG G L+GR E Sbjct: 245 LILEQAVPPDRS----SPADTGGPATAGAVPE--------RDGGPLVGRDAELERLRDTL 292 Query: 299 XXXXXGETRWLVLSGPPGIGKTRLAEEI---TDGCDAEVVWVSCPDERSTPPWWPMRQLV 355 R L L G GIGKT LA + VVW CPD PP+W Q+V Sbjct: 293 DAATGQSGRVLTLVGEAGIGKTSLAAALGARAAATGVPVVWGRCPDVGQAPPFWLWSQVV 352 Query: 356 RAL-----------GADADEVLEVPPHADPD------TARFQVYERVQALLESTGRP--A 396 RAL + D P D TARFQVYE V L+ + R Sbjct: 353 RALVAMPQTRATGSASRLDGFAAGAPSGPADGRGLDPTARFQVYEAVSELVHAAARERGL 412 Query: 397 VVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRH 456 +VV+DD+ AD S L ++A AL +V T+R + +A +ARG G Sbjct: 413 LVVLDDLHAADPDSLLLLRFLATALPASRALVVATLRPYGDDPALVATVAELARGGGFGQ 472 Query: 457 LALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAERG---EIP 513 + L L VA L + L RTGGNPFF++E R R + G E+P Sbjct: 473 VRLGGLDAAAVADLVRGRTGVAPPEPVVTRLVTRTGGNPFFLTELLR-SRTDPGAAAELP 531 Query: 514 VAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXX 573 +++ + RLAGL L + +V G +D + VLA Sbjct: 532 PSIRDTVRLRLAGLPGPARRCLDLLSVAGHDLD---LAVLAAALDSTAETVAEDLAPAYP 588 Query: 574 ERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVA 614 +VV G F H L+ + A L RR LHA++A Sbjct: 589 AALVVETGPG-ALAFRHPLIAEVTYAELVPPRRAALHARLA 628 >tr|C1YMN7|C1YMN7_NOCDA Tax_Id=446468 SubName: Full=DNA-binding transcriptional activator of the SARP family;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1153 Score = 247 bits (631), Expect = 6e-63 Identities = 314/1166 (26%), Positives = 425/1166 (36%), Gaps = 123/1166 (10%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPL+ V + P+ + P+ RAVLA LL+A+GR V VDRL+D +W + P + A+++ Sbjct: 14 VLGPLEAVGAHGPLALKGPRHRAVLARLLVAEGRAVPVDRLVDDLW-EAPAEGSVAAVRT 72 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 ++S LRR+L + A +V PPGY L A DAVD +F A + + E R Sbjct: 73 FVSALRRSLEPDRPARRPARLLVTAPPGYALRAGPDAVDARRFAAAVARGGALLTEDRPG 132 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP + W +A R LR V+ ALLALGR A+ Sbjct: 133 AALDGLEEALGWWRGPAYAEFAAYPWARAEADRLEGLRLLAVERHAEALLALGRAGDAVP 192 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 A+ A PL + A L LYR+GR +AL A R + L +ELG+ PG ELR L++ Sbjct: 193 ALEAHALAHPLRENAWRQWALALYRSGRQGDALAALRRARRTLADELGVDPGPELRRLES 252 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKRE-XXXXXXXXX 299 +L QAP L PR+ AQR +GR RE Sbjct: 253 DVLAQAPHLI--PRA---------ATAVPARAESAPERAQRP-FVGRARELELLEGAAAS 300 Query: 300 XXXXGETRWLVLSGPPGIGKTRLAEEIT---DGCDAEVVWVSCPDERSTPPWWPMRQLVR 356 R ++SG G GKT LAEE+ G W P+ P WP Q+ Sbjct: 301 AAPRAPARVALVSGDAGAGKTALAEELARRLAGRGWTAAWGRGPEHEGAPAVWPWTQIAA 360 Query: 357 ALGADADEV--------LEVPPH-ADPDTARFQVYE------------------------ 383 L A AD + H ADP R + Sbjct: 361 VLTAAADTATHGVATGPAQAAEHAADPGAPRAATTDPTGTGSGAPRIDTATATGITAPSG 420 Query: 384 -RVQALLESTGRPAVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVL------------ 430 A + T P V D +A A R PV +V Sbjct: 421 TAAPARDDDTTAPGVASADPAAARFGVLRRAARLLASATRRGPVLLVFDDLHRAAEETLE 480 Query: 431 ------------------TVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALAN 472 T R + + LA +A G+ R L L+ D AL Sbjct: 481 LFTFLAAEPLPGPVLLVGTYRTGEVLPALTAALARLAPGEPAR-AYLGGLAEDATGALVR 539 Query: 473 QISEDVVDHAEAQILAERTGGNPFFVSEYARL----PRAERGEIPVAVKSVLDRRLAGLD 528 + VD + + R+GGNPFFV E ARL A +P V+ V+ RL L Sbjct: 540 ALVGRDVDGRALRTVHRRSGGNPFFVRELARLLSDGDGAALDAVPAGVRDVIRHRLGSLT 599 Query: 529 PGVLAVLRVAAVIGDPIDADVVPVLARVA-KIXXXXXXXXXXXXXXERIVVNAHTG-DGY 586 PG A+LR A+VIG ID DV+ L+ + +R + G G Sbjct: 600 PGARALLRQASVIGRDIDPDVLSALSPDGDALLDALDEALEAGFLTDRAEPDEPDGAPGL 659 Query: 587 TFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVDPXXXX 646 FAH L+RD L L RR H VAE + D A A H A Sbjct: 660 RFAHVLVRDTLYQDLSRPRRAHWHTAVAEAVEALHPDRA-DLLAHHFGRAGTRATATRAA 718 Query: 647 XXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRG 706 +R++ AA W+ A+ A+DR S + R+ L M + A G Sbjct: 719 HHARTAALRAEERFAPHEAARLWREAVAAHDR----SGEDRPRERLEAVMGMVRALAVTG 774 Query: 707 RTVLGYVERHLTEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXX 766 R R A E D A L A V+ ++ P L P +D L + Sbjct: 775 RLEEARHHRARAVAAAEELGD-AELTAQVI--TAFDVPALWPRNDDEELARQIAGAAERT 831 Query: 767 XXXXXXXXXXXXXXXXXCCYHPDPGVAAGH----LDRAERLAERTEDPDVLADVLMGRLI 822 G A G RAE A DP +L L R + Sbjct: 832 LAALPEDRPEQRVRLLCALALELRGTATGRGPDAARRAEEAARGLGDPALLCLALNARFM 891 Query: 823 -TYSGVNERSHEIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLRAGV 881 ++ G + +++ V+ H V + LAD + H Sbjct: 892 QSFQGSGRAPQRVEIGAELVDLASRHGLVTFEVLGHLVLVQAHSALADFGAADAHAADAD 951 Query: 882 VGSEELQLPVLRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVT 941 +P++ RW EA+ RG +EA+ + A+ T + G G+L Sbjct: 952 RLGSRYGIPLVGVFTRWYEALRTAARGAVEEAEAAYRAASVRLADTGMPGVEQGILPLAL 1011 Query: 942 LLREIGGPVPAGFGVTPADVERGGQGMEAMVHVALLTIERGPRAAAATRLDNWVNTDRGQ 1001 L + G PA P D R G A AL + E P A Sbjct: 1012 LCLRLQGGRPA-----PVD-PRQDWGPYAPWADALASPESAPPPPDAPP----------- 1054 Query: 1002 IWTNLGEA--AWMAHLAVDYGLGEYAEPLLAVLQPFTDRIAVIGQ-VGHAGPVALATARL 1058 LGEA A A G E +L P +A G + GPVA L Sbjct: 1055 --GLLGEALTCLAARAATAVGDHPAMERAHRLLSPAAGELAGAGSGLLTLGPVAHQLGDL 1112 Query: 1059 HALRGDRARALEDLAKAEDVARRTGA 1084 G R RA E A VA R G+ Sbjct: 1113 DRALGRRERAAEHYRLALRVAIRAGS 1138 >tr|Q5YUG5|Q5YUG5_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 1091 Score = 244 bits (622), Expect = 7e-62 Identities = 236/788 (29%), Positives = 334/788 (42%), Gaps = 72/788 (9%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LG L G V +G P+QR VLA+L+ A+G+VV VDR+++ +W +PP+ A ASLQA Sbjct: 6 VLGSLAAEVGGESVPLGGPRQRGVLALLVAARGQVVPVDRMVEDLWRGEPPSRALASLQA 65 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+SNLRR + G A +V PGY L P AVD +F ++A A + + Sbjct: 66 YVSNLRRLVEPGRPPRAPARLLVSAAPGYALRLPPGAVDAWRFEELVEEARTAADPR--- 122 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP ++ DE W + AR ELR + + A L LG + + Sbjct: 123 VARARLAEALALWRGPAFAEVADEPWAAAEIARLDELRLTARELHVAAGLRLGDPAAVVP 182 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 L PL + LH L L+ +GR ++L A R L +ELGL PG EL L+ Sbjct: 183 DAEALTRDHPLREEGWRLHALALWSSGRQADSLAALRRARATLADELGLDPGPELVALEE 242 Query: 241 AILRQAPEL--AAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXX 298 AIL + ++ AA P P + +GR RE Sbjct: 243 AILTRRTDVLRAAAPVPP-----PDIPRIEPTSPPPATGEPGTPMFVGRSRELTALLAAA 297 Query: 299 XXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWV----SCPDERSTPPWWPMRQL 354 R +++G G+GK+ L E++ A W+ CPD S PP W ++ Sbjct: 298 EDAARDGVRVALVTGEAGLGKSLLLEQLAARL-ARRGWLVAGGRCPDVDSAPPAWAWVEV 356 Query: 355 VRAL------GADADEVL-----EVPPHADPDTARFQVYERVQALLESTG--RPAVVVID 401 VR + G AD++ P + D RF++ + V LL + RP V++D Sbjct: 357 VRTVVDSVAGGEVADDLAPLLSDSAPANGDAAAGRFRLRQAVWRLLSTAAADRPVAVMLD 416 Query: 402 DVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSS 461 D+ AD+ + L G P+ IV+ R D + + LA +AR R L L Sbjct: 417 DLHRADAATLELLG--GGVEARAPILIVVAYRP-DESERLTATLAALARTAPVR-LDLPG 472 Query: 462 LSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAE-----RGEIPVAV 516 L VA L +E D +AERT GNPF+V E ARL E E+P V Sbjct: 473 LDRAAVAELVR--AECEADDTTVAGIAERTAGNPFYVRETARLLNGEGALVALSEVPEGV 530 Query: 517 KSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERI 576 + VL RR A L ++VLR+AAV G V VL R A + Sbjct: 531 RDVLRRRFARLPESSVSVLRLAAVAG---RESTVDVLVRAADTDEDGVLDALDAGVIAGL 587 Query: 577 VVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITR-------- 628 + G F H L+RD L+ + +R R+HA++A L G+ A+ Sbjct: 588 LDEPGPG-RVRFVHALVRDTLVTDVSRVRITRMHARIAAALEGSGDVAALAHHYARAGSP 646 Query: 629 ---------------RAQHLVAAQPLVDPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAAL 673 R H VAA L D + + + AG + AA Sbjct: 647 KAVGYCVRAAELAEARFAHDVAAALLTDAVAHAADADERVALLGRLLRAQVRAGAFAAAR 706 Query: 674 DAYDRVPVASRSETERDALTVAMLEAHSR--AGRGRTVLGYVERHLTEALRN--ERADTA 729 ++ VA RD L VA A + + RT G V+R + L +RAD A Sbjct: 707 QTREQA-VAIAEAIGRDDLMVAAFTAWTEPTPWQART-YGTVDRPIVTRLARLLKRADLA 764 Query: 730 GLVASVLL 737 V S LL Sbjct: 765 REVRSHLL 772 >tr|D2B641|D2B641_STRRD Tax_Id=479432 SubName: Full=ATPase-like protein;[Streptosporangium roseum] Length = 1118 Score = 241 bits (615), Expect = 5e-61 Identities = 224/684 (32%), Positives = 292/684 (42%), Gaps = 64/684 (9%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPLQ +G VD+G +QRAV+A L+ A G VVS DR ID +W PP A A+LQ Sbjct: 4 VLGPLQAEINGRAVDLGTSRQRAVVARLVAAGGHVVSTDRFIDDLWRGQPPPKALAALQV 63 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+SNLRRAL A+ +V PGY L + VD F AA A+ Sbjct: 64 YVSNLRRALEPDRPPRTPATLLVSAAPGYRLRLEPEQVDAWVFPRLIDSAAGAIASGDGA 123 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 W+GP + D +W +A R ELR V+ R A L LGR A Sbjct: 124 RALDLADRALALWQGPAYAEFADAEWAEPEATRLEELRLVAVECRAEARLTLGR--NAEI 181 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + Q A PL + A L L YRAGR +AL A + + L ELG+ PG LR L+T Sbjct: 182 ELEQHVRAHPLRENAVRLLALAYYRAGRQADALAAIRKARETLAAELGVDPGPALRALET 241 Query: 241 AIL-------RQAPELAAWP---RSPE-----WTGXXXXXXXXXXXXXXXXXGAQR---- 281 IL RQ P P R+PE G A R Sbjct: 242 DILAHAGSLNRQEPAAPGSPAAIRAPERAASRGAGEAAKRDAPREGEEAGERDAPREVEG 301 Query: 282 -GLLIGRKREXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVS-- 338 G LIGR E T WL G G GK+ LA + W++ Sbjct: 302 DGELIGRTAELAALHALAETAGL-RTVWL--GGDAGAGKSTLAGTFARRLAGQG-WLTAG 357 Query: 339 --CPD-ERSTPPWWPMRQLVRALGAD---ADEVLE--VPPHAD--PDTARFQVYERVQAL 388 CP+ + PP W +++R L AD AD+V P D P T RF + V+ Sbjct: 358 GQCPETDGGAPPAWAWSEVLRRLAADRPPADDVAVRLAPLLTDDTPTTGRFLLARAVEDY 417 Query: 389 LESTGRP---AVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLL 445 L R +VV++DV AD + L ++A L + I+ T R + + Sbjct: 418 LARVVRADTRLLVVLEDVHRADEETLQLLRHLAVRLASAKIMIIATYRPAEAADHLGATW 477 Query: 446 ATVARGDGNRHLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLP 505 A +A G L L LS D+VA L + S VD A+ +AERTGGNP FV E ARL Sbjct: 478 AALA-GRQTHRLDLHGLSDDEVARLLRERSGREVDLLTARTVAERTGGNPLFVCETARLI 536 Query: 506 RAE----RGEIPVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXX 561 + +P V+ ++ RR+A L V LR AAV+G +D DV+ L + Sbjct: 537 TTDGTPAARALPPGVRDLIRRRIARLPATVRTTLRDAAVVGRDVDVDVLLALDGAEE--- 593 Query: 562 XXXXXXXXXXXXERIVVNAHTG-------DGYTFAHGLLRDHLMAGLPALRRQRLHAQVA 614 E + V TG FAH L+R+ L P +RR RLH +V Sbjct: 594 --------EAVLEGLEVGVLTGLLTEPAPGRVRFAHVLVRETLYEDTPGIRRIRLHGRVF 645 Query: 615 EVLAGNPSDDAITRRAQHLVAAQP 638 L D L AA P Sbjct: 646 GALERVRPGDVSALGHHALAAATP 669 >tr|A8L118|A8L118_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Frankia sp.] Length = 1118 Score = 228 bits (581), Expect = 4e-57 Identities = 232/805 (28%), Positives = 319/805 (39%), Gaps = 99/805 (12%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPL++ G +D G +Q +LA+LL+ GR +S LID +W DD PASA LQ Sbjct: 26 ILGPLRIWRGGVELDAGPRQQACLLALLLIRAGRPISTSELIDLIWDDDVPASAVNILQK 85 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+ LRR L S + R+ GY A +D+ F +A + EQR Sbjct: 86 YVGTLRRLLEPALPARGTGSYLQRRGNGYLFSADPGMLDVVTFREIAGKARTCLAEQRLD 145 Query: 121 XXXXXXXXXXXXWRGPFLDDL-RDEQWVHEDAARAGELRSECVDHRITALLALGRVSTAL 179 W GP L V AA E CV A+ LG+ L Sbjct: 146 AALDCYVQALALWHGPAGGGLTHGSTAVSLFAAINDEFFDACVPAAELAV-TLGQPELVL 204 Query: 180 AAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQ 239 + PL + + TL AG+ EAL + L ELG+ PG LR Sbjct: 205 QPLRLAAWMAPLHEIVQASLVFTLAAAGQQAEALSVFGTVRARLAEELGIDPGPALRAAH 264 Query: 240 TAILRQAPELAAWPRS-----------------------------PEWTGXXXXXXXXXX 270 +L P AA + P G Sbjct: 265 LRVLGHPPTSAASAGADDDGPAATAGAPAGGHAGGPLPGQPPTELPTLVGSAGKPSAEQP 324 Query: 271 XXXXXXXGAQRGLLIGRKREXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGC 330 G+ IGR E G T +V+ G PG+GKTRL EE Sbjct: 325 RAPSLETPTADGM-IGRAEELAVLRHAVDSVFAGGTGLVVVEGEPGVGKTRLLEEAGAEA 383 Query: 331 D---AEVVWVSCPDERSTPPWWPMRQLVRALGADADEVLEVPPHAD-------------- 373 D A VVW C + TP WP Q V + HA Sbjct: 384 DRRGALVVWGRCLEGDGTPSMWPWVQAVGTVLDSLPAAAREEWHAGELGRLVEPRGGVPA 443 Query: 374 ----PDT-ARFQVYERVQALLE--STGRPAVVVIDDVQWADSTSASCLAYIA-------- 418 PD+ A+F+++ERV AL+ S RP V+VIDD+QWAD S +++A Sbjct: 444 TPVLPDSGAQFRLFERVVALVGQVSARRPVVLVIDDLQWADVASLQMFSHLAARPPGGAV 503 Query: 419 --GALRDH-PVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQIS 475 GALRD PV +E+AR+LA +R +R + L L +VA L + + Sbjct: 504 ITGALRDRVPVP----------GSELARMLAAASRLPRHRRIRLGPLDAAEVAELVRRET 553 Query: 476 EDVVDHAEAQILAERTGGNPFFVSEYARL---------PRAERGEIPVAVKSVLDRRLAG 526 D Q + RT GNPFFV E +RL A R +P V+ V+ R+AG Sbjct: 554 GQTPDVGVTQSIHVRTAGNPFFVRELSRLLADSGVLTEDAAARAGVPSTVRDVVRDRMAG 613 Query: 527 LDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGD-- 584 LD +L++AA+IG ID + +LAR A + + + GD Sbjct: 614 LDDDTGGLLQIAALIGREID---LGLLARAADLDAQTCSERLEPLEALGL-LEPTPGDPF 669 Query: 585 GYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVL--AGNPSDDAITRRAQHLVAAQPLVDP 642 + FAH L+R+ ++ P LR RLH +VA+ L + + R A HL AA PL DP Sbjct: 670 SFRFAHDLVRESVVRTTPPLRATRLHLRVADALERSDTGGESVAERLAHHLWAAGPLADP 729 Query: 643 XXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSR 702 + + + AA + + A AS SE E AL+ R Sbjct: 730 ARTSSALERAGRRAAAKSAFEAAA---RQLVSAAQVARTASMSERELSALSQLTAVVGMR 786 Query: 703 AGRGRTVLGYVER--HLTEALRNER 725 +G + + +ER L L ER Sbjct: 787 SGYVGSAVDLLERAEELARDLGRER 811 >tr|D3CVF6|D3CVF6_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Frankia sp. EUN1f] Length = 1191 Score = 214 bits (546), Expect = 5e-53 Identities = 313/1203 (26%), Positives = 439/1203 (36%), Gaps = 176/1203 (14%) Query: 1 MLGP-LQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQ 59 +LGP + G+P+++G ++R ++ +LLL G V+ D L D +W +PP +A ++LQ Sbjct: 11 VLGPTIATARDGSPLELGPRRRRELVTLLLLRPGVTVTADALADELWQGEPPPAARSTLQ 70 Query: 60 AYISNLRRALRDGSDTAQVASP----IVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVE 115 A++S LRR L G ASP +V + GY L +D + A +A++ Sbjct: 71 AHLSVLRRVLEPG------ASPPYRLLVTRGSGYALAVSPADLDTGRLDESRALARRALD 124 Query: 116 EQRWVXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRV 175 + V WRG DL D + E + + L LG Sbjct: 125 DGDPVGARAHLERALALWRGEPFADLADHPTAEAARVKLAEDQMAVRADLLAVRLDLGEH 184 Query: 176 STALAAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAEL 235 + + L S PL +R LYR GR +AL + Q L N+LGL PG +L Sbjct: 185 DAVIGELRVLTSQHPLQERLHAQLATALYRGGRQADALTVIRQARQTLANDLGLEPGPDL 244 Query: 236 RELQTAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRG-------LLIGRK 288 REL+TAILR LA P P TG GA L+GR Sbjct: 245 RELETAILRHDAGLAR-PGVPH-TGVLAAPAATAPAPATPRAGAAGAGAAGGQLPLLGRD 302 Query: 289 REXXXXXXXXXXXXXGETRWL-VLSGPPGIGKTRLAEEITDGCDAEVVWVSCPDERSTPP 347 RE G T + +LSG GIGKTRL EE+ A+ W C P Sbjct: 303 RELAALEQAWERTTTGLTTGVALLSGEAGIGKTRLLEELARRVPAQTRWGRCTQVSGAPA 362 Query: 348 WWPMRQLVRALGADADEVLEVPPHADPDTARFQV---YERVQALLESTGRPAVVVIDDVQ 404 +WP RQL+R L A+ D RF+V R A L S G P + +++D+ Sbjct: 363 YWPWRQLLRGLPAEVVGAFGAVRDGD-GPVRFEVALAIGRHLAELASAG-PVLALLEDLH 420 Query: 405 WADSTSASCLAYIAGALRDHPVAIVLTVR--------------DVDHTAEVARLLATVAR 450 WAD S + L +A L D PV +V + R D + RLL +AR Sbjct: 421 WADPASTAMLEILASELTDVPVLLVCSFRPGRAGTAAPGDPAGDGQDGEPLRRLLGVLAR 480 Query: 451 GDGNRHLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARL------ 504 + L+ L DV L +S +A + RT GNPFFV E ARL Sbjct: 481 HPALTRVELAGLPPTDVGRLFGAVSGMAPTPEQAAAVRRRTAGNPFFVVELARLAATTSV 540 Query: 505 -------------------PRAERGEIPVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPI 545 G +P V+ + RLA + G+ ++L AAV+G Sbjct: 541 GRATAAGQATADDQATAVDQATAAGTLPTGVRDTVLARLAAMPAGLTSLLAAAAVVGREA 600 Query: 546 DADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGD-----GYTFAHGLLRDHLMAG 600 VV A + + I V A D F H ++R+ ++ G Sbjct: 601 ALPVVSAAAGLPQAGALDAVD---------IAVAAGLADVPAPGRLRFTHDIVREAVLVG 651 Query: 601 LPALRRQRLHAQVAEVLAGNPSDDA-ITRRAQHL-VAAQPLVDPXXXXXXXXXXXXXXTQ 658 + R RL VA+ L + A HL VAA D Q Sbjct: 652 MGTAERARLAGLVADALVAHQGASVPAAVLAHHLRVAAAGHPDLRAAQAQAAAARAALAQ 711 Query: 659 RWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVAMLEAHSRAGRGRTVLGYVERHLT 718 D A A D VP + L V ++ A R ++ LT Sbjct: 712 FAFEDAAT----LAGHGLDLVP------GDHPDLRVDLMVIRGEALRRSADFAEAQQVLT 761 Query: 719 EALR--NERADTAGLVASVLLRSS---GGWPWLAPGDDPGALLTLLQRXXXXXXXXXXXX 773 EA R DT + L R+ GG+ L PG + L Sbjct: 762 EAARIATAHGDTVRAGLATLTRAGDAVGGYSSLFYVPVPGLIADLDAAAAALPAAEGDLR 821 Query: 774 XXXXXXXXXXCCYHPDPGVAAGHLDR-AERLAERTEDPDVLADVLMGRLITYSGVNERSH 832 CY +P A+ + R AE LAE+ A+ G LI + Sbjct: 822 LRLLTSAAVRACY-GEPAAASRLIGRAAEVLAEQRTTRPGAAEEPAGLLI--------AR 872 Query: 833 EIFEWVARLEVLQHSRSREDSVIAHSVATMSAMLLADTELTERHLR------AGVVGSEE 886 + W L+ + + D+++A S EL RHLR G V + E Sbjct: 873 ALAAWTPAHTGLRLAIA--DTLLATVEGPPSG------ELVARHLRRAVLWELGEVEAAE 924 Query: 887 LQLPVLRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYGAGSGLLAEVTLLREI 946 + +LR + DFD R H LY AEV + + Sbjct: 925 GESAAFSRRLRQVR------DPDFDLLDRCWQAMHH------LYAGRYDQAAEVAAV--L 970 Query: 947 GGPVPAGFGVTPADV----------------ERGGQG--------MEAMVHV------AL 976 GGP+P GVTP + +RG G ME V AL Sbjct: 971 GGPMP---GVTPGAINALTQSAATIHGITAWDRGTMGDFLPQVDDMEEQVIAEWALIRAL 1027 Query: 977 LTIERGPRAAAATRLDNWVNTDRGQIWTNLGEAAWMAHLAVDYGLGEYAEPLLAV-LQPF 1035 + G +AA + V D + E ++ LA A P +A Sbjct: 1028 ALADTGRPESAAREVRRLVQPDLADVAPGAMEPVYVVLLAEIVAQLVDAVPAMAEWAAGL 1087 Query: 1036 TDRIAVIGQ--------VGHAGPVALATARLHALRGDRARALEDLAKAEDVARRTGARPT 1087 DRIA G + GP AL L G A+ DL + +A +TG P Sbjct: 1088 ADRIARYGDTLVTFVLGLTCMGPAALYRGGLALALGRVDEAIADLRSSLVLAEKTGGVPF 1147 Query: 1088 LMR 1090 ++R Sbjct: 1148 VIR 1150 >tr|C1IC34|C1IC34_STRCI Tax_Id=249586 (polR)SubName: Full=Pathway-specific regulatory protein;[Streptomyces cacaoi subsp. asoensis] Length = 1111 Score = 204 bits (518), Expect = 8e-50 Identities = 204/725 (28%), Positives = 287/725 (39%), Gaps = 92/725 (12%) Query: 3 GPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQAYI 62 G + PV +G P+ RAVL +L+L G+VV VD+L+D +WGD PP A+LQ Y+ Sbjct: 22 GVMTARRGSEPVHLGPPRHRAVLGLLMLRLGQVVRVDQLVDELWGDKPPRRPHATLQTYM 81 Query: 63 SNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWVXX 122 S+LRRAL G +P+ + PGY L A+D+ +F + Q E R+ Sbjct: 82 SHLRRALTSGHGKDAGVAPLHYRAPGYVLALDPQAIDVCRFDEMVSRGQQHAAEGRFGEA 141 Query: 123 XXXXXXXXXXWRG-PFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALAA 181 WR PFL DL + + E++AR LR+ V R ALLALG T + + Sbjct: 142 REALDSALHLWRADPFL-DLTSYEPLAEESARLQHLRTAAVTIRAEALLALGDARTTVES 200 Query: 182 VTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQTA 241 + + P +R M LYR G+ EAL Y R L ELG+ PG +LR + A Sbjct: 201 LRREVIRFPSDERIVAALMTGLYRLGQQTEALRLYERTRTQLSEELGVAPGDDLRRVHLA 260 Query: 242 ILR----------QAPELAAWP--------------------RSPEWTGXXXXXXXXXXX 271 ILR Q E+ A P P TG Sbjct: 261 ILRHELGGAAPAGQRAEVRARPDREPRSEESRPPADAVHGRAADPATTGTGPGGHTGARP 320 Query: 272 XXXXXXGAQR-------GLLIGRKREXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAE 324 + L GR+ G + G G+GKT L Sbjct: 321 VDDAAGSGRTPAHASPLPLFEGREHALASLRRSITAALEGSGHLTAVVGQAGVGKTELLA 380 Query: 325 EITDG-----CDAEVVWVSCPDERSTPPWWPMRQLVRALGA----------------DAD 363 + T VV VSC P W +Q +R LG Sbjct: 381 QATAHAAGWVAGTRVVRVSCRTAEGMPACWVWQQALRMLGGPDALPGDNAPRLCPDPTVT 440 Query: 364 EVLEVPPHADPDTARFQVYERVQA--------LLESTGRPAVVVIDDVQWADSTSASCLA 415 + + P AD D R Q +R A L + P ++V+++V AD + LA Sbjct: 441 TLSDSPEGADAD-RREQTQQRFLAHDALSETILRHADDAPLLLVLENVHLADRPTLDVLA 499 Query: 416 YIAGALRDHPVAIVLTVRD--VDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQ 473 ++ + V++V++VR+ V AE L + + L LS + V L Sbjct: 500 LLSDGTQGRAVSVVISVRESGVGAGAEPDGPLQELLADSRTDVVHLDDLSEEQVQTLLAA 559 Query: 474 ISEDVVDHAEAQILAERTGGNPFFVSEY------------ARLPRAERGEIPVAVKSVLD 521 + L ER+GGNP+ + + AR R EIP V S+L Sbjct: 560 QGGPGPATPVVRGLYERSGGNPYLLGQLLAHAGGARSLHAARAARQVLTEIPTGVSSMLR 619 Query: 522 RRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAH 581 RRLAGL P VL VLR AV+G D ++ + R +A Sbjct: 620 RRLAGLAPEVLRVLRGCAVLGTEADLTLLTTVLGDTTPGVRAVEEALRTGLLRRDHDHAR 679 Query: 582 TGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLA----GNPSDDAITRRAQHLVAAQ 637 T F +GL+RD L+A + R LHA +VL G+P+ A +R A H A Sbjct: 680 T---LVFRYGLVRDVLLAEMSDQERSDLHAWAVDVLGRQADGHPA--AASRLAHHAWQAS 734 Query: 638 PLVDP 642 + P Sbjct: 735 LTLPP 739 >tr|C6WRN3|C6WRN3_ACTMD Tax_Id=446462 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Actinosynnema mirum] Length = 1146 Score = 186 bits (472), Expect = 2e-44 Identities = 199/687 (28%), Positives = 272/687 (39%), Gaps = 82/687 (11%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP++ V++G+ +QR V +L L G V D LI VWGDD PA+A S+ Sbjct: 12 LLGPVRAWVGEREVELGSSRQRGVFTVLALRAGTAVRRDELIRGVWGDDAPATAGGSVHT 71 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S LR+AL + GY L A D+A F A ++A + + + Sbjct: 72 YVSVLRKALEPDRPRGTPPRLLESSGSGYRLRLEAADSDVAAFAALRERAREQLAAEEHR 131 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRG L L D + A GE RS + R A LALG + Sbjct: 132 AALRTLDEALALWRGTALSGL-DGPFARARRASLGEARSAAREARAEAALALGEHGDVIG 190 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + L + EPL +RA L L L+RAGR+ EAL+ ++L +ELG+ PG LR + Sbjct: 191 ELGALVAEEPLRERARELLALALHRAGRSAEALEVLREARRVLRDELGVDPGPGLRAARD 250 Query: 241 AILR--------QAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXX 292 +LR P+ AA PR G +L+GR E Sbjct: 251 LVLRDHRAGPGQDPPQAAAIPR--------------------PRRGEADQVLVGRDEELR 290 Query: 293 XXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDA--EVVWVSCPDERSTPPWWP 350 G R L + G GIGK+ L +T A V DE T +P Sbjct: 291 VARELIGATSSGRGRVLWVEGEMGIGKSSLLAAVTALASAAGHRVAHGVADELGTR--FP 348 Query: 351 MRQLVRALGADADEV------------LEVPPHADPDTARFQV---YERVQALLEST--G 393 +R + L D E PP TA + ER+ AL+E Sbjct: 349 LRLAMDCLDVDVRSPDPRRAATARALRDERPPSGSVFTAGDPIAAAVERLGALVERLCGD 408 Query: 394 RPAVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDG 453 P VV+DD+QWAD +S + G R P+ +V R V H +VARL G Sbjct: 409 GPLTVVMDDLQWADESSTELWHRLTGVARRQPLLLVGAARPVPHRVDVARLRRDAEA--G 466 Query: 454 NRHLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAERGEI- 512 L L L+ V ++ Q+ + +A R GGNP +V E A ER + Sbjct: 467 GAALDLLPLTDSAVTSVVGQL-VGAAPGPGLRRVAARAGGNPLYVREVADALVRERAVLV 525 Query: 513 ---------------PVAVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDA-DVVPVLARV 556 PV++ S + RL L VLR AA++G D+ VLAR Sbjct: 526 SAGIAEVAPDVLDRTPVSLVSAVADRLDFLTDPTRQVLRWAALLGGEFSVEDLSVVLARP 585 Query: 557 AKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEV 616 V G F H ++R L G P+ R LH Q A Sbjct: 586 VPDLLGAFTEALAAG------VLRDAGSRMAFRHPVIRQALYEGTPSALRTALHQQAARA 639 Query: 617 LA--GNPSDDAITRRAQHLVAAQPLVD 641 LA G P++ A L+AA VD Sbjct: 640 LAESGAPAEHV----AGQLMAAAGEVD 662 >tr|A4FKV5|A4FKV5_SACEN Tax_Id=405948 SubName: Full=Putative uncharacterized protein;[Saccharopolyspora erythraea] Length = 1184 Score = 184 bits (466), Expect = 9e-44 Identities = 267/1058 (25%), Positives = 388/1058 (36%), Gaps = 114/1058 (10%) Query: 34 RVVSVDRLIDAVWGDDPPASATASLQAYISNLRRALRDGSDTAQVASPIVRQPPGYYLDA 93 RVVS L+DA+WG+ PPASA S+ Y+S LRRAL + P GY L Sbjct: 5 RVVSRHELVDALWGESPPASAEGSVYTYVSGLRRALEPQRSRRSTDGLLTSHPAGYTLRL 64 Query: 94 PADAVDLAQFTAGCQQAAQAVEEQRWVXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAAR 153 P +++D+ F ++ Q + WRG L + + R Sbjct: 65 PDESLDVRVFDRLREEGGQRLARGDHQGALEALDGALKLWRGEVLSGV-PGPFAELQRQR 123 Query: 154 AGELRSECVDHRITALLALGRVSTALAAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEAL 213 +LR + R A LALG + A + +L PL + L M LYR GR EAL Sbjct: 124 LSDLRLATAERRAAAALALGSHAEVAAELAELVHEFPLRESLRVLLMTALYRGGRHAEAL 183 Query: 214 DAYTRHAQMLDNELGLVPGAELRELQTAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXX 273 + + ++L ELG+ PG EL + +L P L P S Sbjct: 184 EVFRDARRVLVEELGIEPGPELSRMHEQVLANDPALDPAPVSKPSPRTALLSVVPAQVAR 243 Query: 274 XXXXGAQRGLLIGRKREXXXXXXXXXXXXXGETRWLVLSGPPGIGKTR-----LAEEITD 328 G R +GRK E G R + + G PGIGK+ LA+ Sbjct: 244 ALQRGESR--YVGRKAEAAQLGELVSEVLAGRGRSVWIEGEPGIGKSELLTFALADAGRR 301 Query: 329 GCDAEVVWVSCPDERSTPPWWPMRQLVRALGADADEVLEVPPHADPDTARFQV------- 381 GC ++ W + DE S +P++ + LG DA DP AR Sbjct: 302 GC--QLAW-AVADELSQR--FPLQVMTECLGIDAKA-------PDPRRARLAATLHSESS 349 Query: 382 YERVQALLESTGR-----PAVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVD 436 E V LLE P ++VIDD+QWAD S + A R P+ +V R Sbjct: 350 AEPVDQLLELVDELCATAPLMLVIDDLQWADEASVMVWHRLCAATRQLPLLLVAASRPAP 409 Query: 437 HTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISEDVVDHAEAQILAERTGGNPF 496 E+ +L + DG L L L+ ++ L ++ +I A R GNP Sbjct: 410 ERVELGQLRRAIEARDG-VVLRLGPLTEPEIERLLGEVIGAKPGPVLREI-ASRASGNPM 467 Query: 497 FVSE----------------YARLPRAERGEIPVAVKSVLDRRLAGLDPGVLAVLRVAAV 540 +V E A +P A E P ++ + + RRL L VLR A+ Sbjct: 468 YVRELADALVRDDAVRVVDGVADVPAASVSEAPDSLIAAVARRLDFLSTSTREVLRWGAL 527 Query: 541 IGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHGLLRDHLMAG 600 +G V LA A ++VNA D F H LLR L G Sbjct: 528 LGLEFS---VTDLAAAAGRRVSELMGTLEEAVGASVLVNAE--DHLAFRHPLLRQALYDG 582 Query: 601 LPALRRQRLHAQVAEVLA--GNPSDDAITRRAQHLVAAQPLVDPXXXXXXXXXXXXXXTQ 658 +P R LH Q AE LA G P + + A+HLV A D Sbjct: 583 IPKALRNALHRQAAETLANIGAP----VKQVAEHLVVATAADD-------------RWVV 625 Query: 659 RWSSD----IAAGWWQAALDAYDRV-PVASRSETERDALTVAMLEAHSRAGRGRTVLGYV 713 W ++ ++ A++ +RV E R+ L A+++ RAGR + Sbjct: 626 NWLAENNVALSNRAPLIAIELLERVLRTGQVGEPNREVLLAALVKVLFRAGRDPLMQAQQ 685 Query: 714 ERHL-TEALRNERADTAGLVASVLLRSSGGWPWLAPGDDPGALLTLLQRXXXXXXXXXXX 772 L T+ R+ A+ LVA++L R G+ P A+ TL Sbjct: 686 ALALATDPYRS--AEMRQLVAAMLHRR---------GETPAAIDTLGNAADDPAVPEIWR 734 Query: 773 XXXXXXXXXXXCCYHPDPGVAAGHLDRAERLAERTEDPDVLADVLMGRLITYSGVNERSH 832 D + + A A T DP ++A L R + S + Sbjct: 735 ARHRSLLANFRRGDLSDLDLTERNAREAYSQALTTGDPYLIAHALQTRWLVDSVRRDHDG 794 Query: 833 EIFEWVARLEVLQH----SRSREDSVIAHSVATMSAMLLADTELTERHLRAGVVGSEELQ 888 + LEV+ S R D + S + L + E T R R V ++ L Sbjct: 795 ALVHIDNALEVVGEDAALSEFRFDLLDNRSFTLQNLDRLDEAETTMRAARK--VAAQHLP 852 Query: 889 LPVLRAQLRWMEAVLATWRGDFDEAQRHHSIAAHVHEQTELYG----AGSGLLAE---VT 941 + L+ EAV W G +D+A YG + LLA Sbjct: 853 ----SSGLQVTEAVHYYWVGRWDDANLELQTLTEDGPAISFYGLREPGPAALLAHGVGAL 908 Query: 942 LLREIGGPVPAGFGVTPADVERGGQGME------AMVHVALLTIERGPRAAAATRLDNWV 995 + G P + + A+ G E +V AL +RG + + LD + Sbjct: 909 IAARRGDPNMVAYHLDAAEEYTPSTGAERESYDFLLVAQALAAEQRGEQDKSLLILDPIL 968 Query: 996 NTDRGQIWTNLGEAAWMAHLAVDYGLGEYAEPLLAVLQ 1033 N + + LA+++G + A LAV Q Sbjct: 969 NPSFAPLMLRHQWLPDLVRLAIEFGDLDRAHQALAVCQ 1006 >tr|D1S4M1|D1S4M1_9ACTO Tax_Id=644283 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Micromonospora aurantiaca ATCC 27029] Length = 683 Score = 182 bits (463), Expect = 2e-43 Identities = 187/659 (28%), Positives = 272/659 (41%), Gaps = 53/659 (8%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP++ + +D+G ++RA+ AML R V+ LI A+WG+ P++A ++ Sbjct: 8 VLGPVRAWNGEVEIDLGPARRRALFAMLAANANRPVTRAELIRALWGESAPSAAAGNIYT 67 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S LRR+L + GY L A+D +F A C+ A R Sbjct: 68 YVSGLRRSLGPAGGMLRSGRA------GYTLRLDPGALDADRFEALCEAAVAPAAAGRPA 121 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 W+G ++ + D R E+R + R +L G +A Sbjct: 122 PAVALLDEALALWQGEPYANVTG-LFADLDRHRLTEMRIAAAERRARLVLTGGGDDALIA 180 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 +T L PL + L M L+RAGR EALD + ++L +ELG+ PG LRELQ+ Sbjct: 181 DLTALVRDHPLHEPFHELLMCALHRAGRGTEALDVFHAARRVLVDELGVEPGPALRELQS 240 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXXX 300 IL A AA P P QRG L+GR E Sbjct: 241 RIL--AEPAAAPPAVP------VTPVAEVPAAVAAPPVPQRGRLVGRDAELALLRDLLDA 292 Query: 301 XXXGETRWLVLSGPPGIGKTRLAEEITDGCDA---EVVWVSCPDERSTPPWWPMRQLVRA 357 G + + + G PGIGK+ L + A V S + S P MR+ +R Sbjct: 293 VGEGRSAIVWIEGEPGIGKSALLDAALHEARARGHRVARGSAEELSSRIPLHVMRRALR- 351 Query: 358 LGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLAYI 417 LE PH DP TA +V + V+ L + P V+ +D +QWAD S + Sbjct: 352 --------LEDAPHDDPATAVDRVLDHVRRL--TAEGPLVLAVDHLQWADEVSLLAWERL 401 Query: 418 AGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISED 477 A R P+ +V T R ++ARL V+ G+ + L+ L D+ + ++ + Sbjct: 402 AALTRWLPLLLVATARPEPGRRDLARLRRGVSTRAGHL-IRLTPLPPSDIEQIFSR-TVG 459 Query: 478 VVDHAEAQILAERTGGNPFFVSEYARLPRAERG--------EIPVAV----KSVLDRRLA 525 V A + LA GNP + E AE G E+ +S+LD A Sbjct: 460 VPPGATLRSLAPLAAGNPLYARELVTGLVAEDGVRVVDGLAEVDARADDMPRSLLDTVRA 519 Query: 526 GLD---PGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHT 582 LD PG LR AA++GD V +A V ++V+A Sbjct: 520 SLDHLSPGAREALRYAALLGDEF---AVTEVAAVTGRTPFDLMADLEEAVAADVLVDA-- 574 Query: 583 GDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVD 641 G F +LR L +PA R LH A+ LA N + R A HL+A P VD Sbjct: 575 GSELAFRQPVLRRALAGSIPAALRPTLHRHAAQALADN--GGPVARVADHLLAGPPEVD 631 >tr|D3C4U8|D3C4U8_9ACTO Tax_Id=648999 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Micromonospora sp. L5] Length = 683 Score = 182 bits (461), Expect = 3e-43 Identities = 187/659 (28%), Positives = 271/659 (41%), Gaps = 53/659 (8%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP++ + +D+G ++RA+ AML R V+ LI A+WGD P++A ++ Sbjct: 8 VLGPVRAWNGEVEIDLGPARRRALFAMLAANVNRPVTRAELIRALWGDSAPSAAAGNIYT 67 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S LRR+L + GY L A+D +F A C+ A R Sbjct: 68 YVSGLRRSLGPAGGMLRSGRA------GYTLRLDPGALDADRFEALCEAAVAPAAAGRPA 121 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 W+G ++ + D R E+R + R +L G +A Sbjct: 122 PAVALLDEALALWQGEPYANVTG-LFADLDRHRLTEMRIAAAERRARLVLTGGGDDALIA 180 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 +T L PL + L M L+RAGR EALD + ++L +ELG+ PG LRELQ+ Sbjct: 181 DLTALVRDHPLHEPFHELLMCALHRAGRGTEALDVFHAARRVLVDELGVEPGPALRELQS 240 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXXX 300 IL A AA P P +RG L+GR E Sbjct: 241 RIL--AEPAAAPPAVP------VTPVAEVPAAVAAPPVPRRGRLVGRDAELALLRDLLDA 292 Query: 301 XXXGETRWLVLSGPPGIGKTRLAEEITDGCDA---EVVWVSCPDERSTPPWWPMRQLVRA 357 G + + + G PGIGK+ L + A V S + S P MR+ +R Sbjct: 293 VGEGRSAIVWIEGEPGIGKSALLDAALHEARARGHRVARGSAEELSSRIPLHVMRRALR- 351 Query: 358 LGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLAYI 417 LE PH DP A +V + V+ L + P V+ +D +QWAD S + Sbjct: 352 --------LEDAPHDDPAAAVDRVLDHVRRL--TAEGPLVLAVDHLQWADEVSLLAWERL 401 Query: 418 AGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISED 477 A R P+ +V T R ++ARL V+ G+ + L+ L D+ + + + Sbjct: 402 AALTRWLPLLLVATARPEPGRRDLARLRRGVSTRAGHL-IRLTPLPPSDIEQIFGR-TVG 459 Query: 478 VVDHAEAQILAERTGGNPFFVSEYARLPRAERG--------EIPVAV----KSVLDRRLA 525 V A + LA GNP + E AE G E+ +S+LD A Sbjct: 460 VPPGATLRSLAPLAAGNPLYARELVTGLVAEDGVRVVDGLAEVDARADDMPRSLLDTVRA 519 Query: 526 GLD---PGVLAVLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHT 582 LD PG LR AA++GD V +A V ++V+A Sbjct: 520 SLDHLSPGAREALRYAALLGDEF---AVTEVAAVTGRTPFDLMADLEEAVAADVLVDA-- 574 Query: 583 GDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLVD 641 G F +LR L +PA R LH A+ LA N +TR A HL+A P VD Sbjct: 575 GSELAFRQPVLRRALAGSIPAALRPTLHRHAAQALADN--GGPVTRVADHLLAGPPEVD 631 >tr|Q0RI37|Q0RI37_FRAAA Tax_Id=326424 SubName: Full=Putative transcriptional regulator;[Frankia alni] Length = 456 Score = 172 bits (436), Expect = 3e-40 Identities = 108/256 (42%), Positives = 139/256 (54%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LG ++V G PVD+G PK RAVLA LLL RVVSVD+LID +W PPA A A++Q Sbjct: 8 LLGRVEVYRDGQPVDLGGPKHRAVLASLLLRVRRVVSVDQLIDDLWPQQPPARAAATVQV 67 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 ++S LRRAL G + A+ +V PGY LD DAVD F + A++ Sbjct: 68 FVSQLRRALEPGRCRGEAATVLVTASPGYLLDVSPDAVDAHAFADLVVRGRAALDAGDPE 127 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 RGP L D+ +V AAR EL + RI A LALGR + +A Sbjct: 128 RAARVLLRAEGMLRGPALADVPVTPFVGAAAARLTELHLGAAEDRIDAELALGRHAALVA 187 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + Q + PL +R ML LYR GR +AL Y ++L +ELGL PG LREL+ Sbjct: 188 ELEQRVRSHPLRERLRAQLMLGLYRCGRQVDALATYRETRRVLRDELGLEPGVRLRELEQ 247 Query: 241 AILRQAPELAAWPRSP 256 A+LRQ P LA P +P Sbjct: 248 AVLRQDPGLAWQPLAP 263 >tr|A8LVA5|A8LVA5_SALAI Tax_Id=391037 SubName: Full=Transcriptional regulator, SARP family;[Salinispora arenicola] Length = 1151 Score = 167 bits (423), Expect = 9e-39 Identities = 212/773 (27%), Positives = 300/773 (38%), Gaps = 70/773 (9%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LG ++ + +G +QRA+ A+L A GR V D LI+ +WG PPA+A S+ Sbjct: 13 VLGSVRAWLGEHELPLGPARQRALFAVLAAAAGRPVGRDELIEGIWGTSPPATAAGSVYT 72 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S LRR+L + P GY L + +D +F A C Q AQ + E Sbjct: 73 YVSGLRRSLATPGLPRSSHHLLTSGPSGYALRLSPEDLDSERFLAFCHQ-AQELREADPQ 131 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 W G + + + + R E R + R L LG LA Sbjct: 132 AAATRWDEALALWHGEAYAGVSGPR-IETERTRLAERRLTATEQRARLGLHLGD-DDLLA 189 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 ++ L PL + L ML L+R GR A++ + L ELG+ PG L EL Sbjct: 190 TLSGLVHENPLHEPLYELLMLALHRIGRRTAAIEVFRAARHTLLAELGVGPGPALTELHR 249 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXXX 300 +L A P +P Q +L GR E Sbjct: 250 RLL-------AEPAAPAIPATRPTPPILPSEISSAACDGQARVLAGRDDELTMLRILVRA 302 Query: 301 XXXGETRWLVLSGPPGIGKTRL---AEEITDGCDAEVVWVSCPDERSTPPWWPMRQLVRA 357 G L + G PGIGKT L A +G ++ W DE P++ + RA Sbjct: 303 VVAGHGTALWIEGEPGIGKTELLTAAIADANGLGCQIAW-GAADELDQDA--PLQVIWRA 359 Query: 358 LGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLAYI 417 LG A PP +P A ++ V+A E TG P V+V+D+ QW D S + Sbjct: 360 LGVRATSEWHRPP--NPAAAAERLLAHVRASCE-TG-PLVLVVDNFQWVDEVSCLLWDRL 415 Query: 418 AGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQISED 477 A R P+ +V R + +A+L +V +G+ L L +L + L Q+ Sbjct: 416 IAATRRMPLLLVAATRLGSYGHALAQLRRSVQAREGH-VLRLRALPPAAIEQLVAQLVGA 474 Query: 478 VVDHAEAQILAERTGGNPFFVSEY----------------ARLPRAERGEIPVAVKSVLD 521 V A ++ R GGNP E A + + E P ++ V+ Sbjct: 475 PVGPYLAAVV-PRLGGNPLGAREVITALVRRGAVRISDGCADIDTSVPVEAPRSLLVVIR 533 Query: 522 RRLAGLDPGVLAVLRVAAVIGDPIDA-DVVPVLARVAKIXXXXXXXXXXXXXXERIVVNA 580 + L P VLR AA++G D+V V R IVV A Sbjct: 534 AIVDLLSPATQEVLRTAALLGPEFSGDDIVAVTGR----SPVDLVANLEEALAAHIVVEA 589 Query: 581 HTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAAQPLV 640 G F H L+R L G+PA R LH AEVL + + TR A+ L A +P V Sbjct: 590 --GSVLAFRHPLVRRMLYEGIPAPARAALHRHTAEVL--HRGGGSATRVAEQLAAGEPPV 645 Query: 641 DPXXXXXXXXXXXXXXTQRWSSDIAAGWWQAALDAYDRVPVASRSETERDALTVA----- 695 D T+R + +A + LD VP S T+R L +A Sbjct: 646 D-EWMVSWLVERHAEVTKR-APQVAGHLLRRVLDT--DVP----STTQRAVLLIALVRLD 697 Query: 696 -------MLEAHSRAGRGRTVLGYVE-RHLTEALRNERADTAGLVASVLLRSS 740 M EA AG R E RHL + R D + A+ LL +S Sbjct: 698 FRHQRWSMAEAREAAGLARDPADRAEMRHLLATMAFRRGD--AVAATSLLEAS 748 >tr|C9ZAR3|C9ZAR3_STRSW Tax_Id=680198 SubName: Full=Putative AfsR-like regulatory protein;[Streptomyces scabies] Length = 1024 Score = 162 bits (411), Expect = 2e-37 Identities = 183/594 (30%), Positives = 246/594 (41%), Gaps = 95/594 (15%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP++ H P+ +G PK RA+LA+LLL G+VV D L+D +WGD+PP +A A +Q Sbjct: 7 LLGPVEAWHGDRPLRLGGPKPRALLAVLLLRAGQVVPADALVDVIWGDEPPDTARALVQT 66 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S LRRAL + A I +PPGY + VDL +F AG A +A E Sbjct: 67 YVSALRRAL-----PGEAAEAIETRPPGYVMRPGTGRVDLLEFEAGTAHARRAAAEGDHT 121 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP L + D + +A R E R ++ RI A L G L Sbjct: 122 GAARLLREALELWRGPALGGVGDA--LRGEAGRLEEARQAALEERIAAELETGGHEAELV 179 Query: 181 A-VTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQ 239 +T L A P +R ML LYR GR +AL Y +L +ELGL PG EL +L Sbjct: 180 TELTSLVEARPTRERPRGQLMLGLYRLGRQADALAVYAEGRAVLADELGLDPGPELTKLY 239 Query: 240 TAILRQAPEL-------AAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXX 292 AILR P L A P + G G L G + Sbjct: 240 EAILRADPALLTATTAAAPQPVTAPRPVSLLPPAIGDFTGREEELGRVVGALTGEREAMP 299 Query: 293 XXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEIT--------DG-CDAEVVWVSCPDER 343 +V+SG G+GK+ LA + DG AE+ S P Sbjct: 300 V---------------VVVSGAAGVGKSALAVQAAHRVAGAYPDGQLHAELHGFSEP--- 341 Query: 344 STPPWWPMRQLVRALGADADEVLEVPPHADPDTA-RFQVYERVQALLESTGRPAVVVIDD 402 PP + +L+RALGAD E DTA R ++ + A GR ++V+DD Sbjct: 342 -VPPAEVLGRLLRALGADPPE----------DTAERGDLFRSLVA-----GRRILLVLDD 385 Query: 403 ------VQWADSTSASCLAYIAGALR-DHPVAIVLTVRDVDHTAEVARLLATVA----RG 451 V+ SA+C + R V T DV A LL V Sbjct: 386 AGGEAQVRPLLPGSATCGVLVTSRARLGGLVGARRTDLDVLDDARGLELLTRVTGPERTP 445 Query: 452 DGNRHLALSSLSTDDVAA--LANQISEDVV---DHAEAQILAERTGGNPFFVSEYARLPR 506 D R A + + LA +I+ + H +LAER E+ RL Sbjct: 446 DDPREQAAARRIVELCGGLPLALRIAGARLATRRHWTPSVLAER------LADEHRRLDE 499 Query: 507 AERGEIPV-------------AVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDA 547 G++ V + VL RR+A L P +AV VAA+ G P DA Sbjct: 500 LSVGDLEVRAGLGLSYRALDACARRVL-RRIATLGPADVAVWAVAALSGMPEDA 552 >tr|C6WGN6|C6WGN6_ACTMD Tax_Id=446462 SubName: Full=Transcriptional regulator, SARP family;[Actinosynnema mirum] Length = 940 Score = 160 bits (405), Expect = 1e-36 Identities = 162/554 (29%), Positives = 235/554 (42%), Gaps = 79/554 (14%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPL+VV G P+ IG RA+LA+L+L RVV +D L+D +WGD+PPA+A + Sbjct: 13 VLGPLRVVADGGPIAIGRRGVRALLAVLVLEANRVVPIDELVDRLWGDEPPATARTIVHG 72 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S LR+ L D +D A A I+ PPGY L +D + ++ + + Sbjct: 73 YVSRLRKVL-DAADPAGSAR-ILTTPPGYQLAVDPWRLDHHR----ARRLISSARGKPAT 126 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP L D+ + + ELR ++ R A L LG + Sbjct: 127 SRAPLLRDALRLWRGPVLADV-----PNAPGSDLAELRLVALEERAAAELELGHHLEVVG 181 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + QL + P +R +L LYR+GR +ALDAY R + L +ELG+ PG +LR L Sbjct: 182 ELRQLVAEHPFRERLVAQAVLALYRSGRRADALDAYQRFHRRLVDELGIDPGPDLRALHE 241 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXXX 300 +LR P L R+PE G A +GR E Sbjct: 242 RVLRDDPALLP-ARAPETPGVAPRPGVVVPAQLP----AAASGFVGRDEELAWLDRLCDT 296 Query: 301 XXXGETRWLVLSGPPGIGKTRL--------AEEITDGCDAEVVWVSCPDERS-TPPWWPM 351 T VL GPPGIGK+ L A + DG + DER+ P + Sbjct: 297 RDRDATTTAVLDGPPGIGKSELAVAWGHRRAAQFPDGLLFAQLGGHADDERARVGPDEVL 356 Query: 352 RQLVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADST-- 409 + + ALG AD V P D R +Y V A GR +VV+DD + A+ Sbjct: 357 ARFLLALGVPADAV----PRGTAD--RVGLYRSVLA-----GRRVLVVLDDARDAEHVRL 405 Query: 410 ----SASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTD 465 + LA + LR L ++ G R L L L+ D Sbjct: 406 LLPPGSGSLALVTSRLR----------------------LGSLVVSAGARVLTLDVLAED 443 Query: 466 DVAALANQISEDVVDHAEAQILAERTGGNPFFVSEYARLPRAERGEIPVAVKSVLDRRLA 525 + A L VD A + L+E+ P V + ARL G +P+A++ R ++ Sbjct: 444 ESARL--------VDEAVGKPLSEQ---EPDAVRDLARL----CGNLPLALRIAAARLVS 488 Query: 526 GLDPGVLAVLRVAA 539 + V +++ A Sbjct: 489 SPEWAVASLVDALA 502 >tr|D1AAN7|D1AAN7_THECD Tax_Id=471852 SubName: Full=Transcriptional regulator, winged helix family;[Thermomonospora curvata] Length = 969 Score = 159 bits (403), Expect = 2e-36 Identities = 130/427 (30%), Positives = 188/427 (44%), Gaps = 53/427 (12%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPL+ G PV +G +QRAVLA+LL+A+GR+VS ++++ AVW PP S T +L A Sbjct: 6 VLGPLKADLGGRPVRLGGLRQRAVLAVLLIARGRIVSAEQIVSAVWEGSPPPSPT-TLHA 64 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S LRRAL A +VR+ PGY L D +D +FT + +A+E Sbjct: 65 YVSELRRALEPDRPARAPARLLVREGPGYALRITPDQLDAERFTDLAARGRRALEAGAAA 124 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 W+GP + D + + AR +LR+ D R+ A++ LGR +TA+ Sbjct: 125 QAEELLGRALDLWQGPAYAEFTDAGFAIPEIARLEDLRAGVQDDRVAAMIELGRHATAVG 184 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + + PL +R L L LYR+GR +AL A + L +ELG+ PG LR L+T Sbjct: 185 LLEAQVAEHPLRERGWELLALALYRSGRQADALAALRTVRRRLADELGIEPGPALRALET 244 Query: 241 AILRQAPELAAWPR---------------------SPEWTGXXXXXXXXXXXXXXXXXGA 279 A+L Q P L PR +WT A Sbjct: 245 AMLTQDPGLDPAPRHGAVPPGRPPAAEPVPPPAEPPAQWTPALRPEPARTGGNLPFALSA 304 Query: 280 QRGLLIGRKREXXXXXXXXXXXXXGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVSC 339 +GR E E R + L+G G+GKTRLA E Sbjct: 305 ----FVGRTEE-----LAMTGRLLAEHRLVTLTGTGGVGKTRLALE-------------A 342 Query: 340 PDERSTP--PWWPMRQLVRALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAV 397 RS P PW LV G + +L A +++ A+L GR V Sbjct: 343 ARRRSDPDGPW-----LVELAGLQEETLLAAAVAAALGIPGVSTPDQLAAVL--AGRELV 395 Query: 398 VVIDDVQ 404 +++D+ + Sbjct: 396 LLLDNCE 402 >tr|Q5YQN4|Q5YQN4_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 1069 Score = 159 bits (401), Expect = 3e-36 Identities = 180/643 (27%), Positives = 255/643 (39%), Gaps = 62/643 (9%) Query: 1 MLGPLQVVH-SGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQ 59 +LGPL+V GTPV + A K A L ++L A+ S D L + +W PPASA +LQ Sbjct: 16 VLGPLEVRGPDGTPVPVPARKH-ADLLVILAAERTTRSADHLCELLWRGHPPASALVTLQ 74 Query: 60 AYISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRW 119 Y++ LRRALR D I GY L DL + A A + Sbjct: 75 GYVARLRRALRPLPDVR-----IETGRNGYVLRCDGSGTDLDLLDVLSRDARAAHADGDV 129 Query: 120 VXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTAL 179 WRG L D+ D + + AR +LR+E V+ L+ LGR A+ Sbjct: 130 ARTVALLERALALWRGEPLADVADIAELAPERARLTQLRAELVELCAEGLMVLGRERHAV 189 Query: 180 AAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQ 239 +T P + L L L GR EAL+ L +LGL P ++ Sbjct: 190 TVLTDEHRRHPYREGLGRLLALALRGCGRTAEALEVLVGLRGRLREDLGLDPEPATVRVE 249 Query: 240 TAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXX 299 LR+AP AA +P LL+GR Sbjct: 250 EQ-LRRAPAPAAPAATP-------------------------SLLVGRAEAAALLDRADE 283 Query: 300 XXXXGETRWLVLSGPPGIGKTRLAEEI--TDGCDAEVV--WVSCPDERSTPPWWPMRQLV 355 G T + + GP GIGKT L E+ G A V P PW L Sbjct: 284 RARHGLT-VVTVHGPAGIGKTALVEDALRRHGHRAFVTAGVRGAPAVPVLTPWLDQAALA 342 Query: 356 RALGADADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLA 415 HA PD + + A + AV V+DD+QWAD+ S +A Sbjct: 343 --------------GHAVPDAPTARDLAALFAEVVREAGRAVAVVDDLQWADADSLRLIA 388 Query: 416 YIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGNRHLALSSLSTDDVAALANQIS 475 LR HPV ++LT+R + EV L V R G H+A+ D AA+A+ ++ Sbjct: 389 AAMRTLRAHPVLLLLTLRPGPYPDEVETAL-RVLRSAGT-HVAVELGPLPD-AAVADLVT 445 Query: 476 EDV--VDHAEAQILAERTGGNPFFVSEYARLPRAERGEIPVAVKSVLDRRLAGLDPGVLA 533 + D A + + G+PF ++ L RA R A + +L + P A Sbjct: 446 AAIGSTDPAARDRIVALSAGSPFVAAQLGDLVRAGRPLDAAAAAEIAAAKLRTVSPEARA 505 Query: 534 VLRVAAVIGDPIDADVVPVLARVAKIXXXXXXXXXXXXXXERIVVNAHTGDGYTFAHGLL 593 + + AV+G ++ + + +V +AH TF H LL Sbjct: 506 LAELLAVLGPDTPLGLLAAAGKESDSGLFDAHLAELVAARIAVVRDAHV----TFGHDLL 561 Query: 594 RDHLMAGLPALRRQRLHAQVAEVLAGNPSDDAITRRAQHLVAA 636 R ++A L RR LH + A+VLA +A++ RA H AA Sbjct: 562 RAAVLAALGDRRRADLHGRAADVLA-ELRPEALSARALHRSAA 603 >tr|D2BBI6|D2BBI6_STRRD Tax_Id=479432 SubName: Full=Transcriptional regulator, SARP family;[Streptosporangium roseum] Length = 378 Score = 156 bits (395), Expect = 2e-35 Identities = 102/252 (40%), Positives = 131/252 (51%), Gaps = 8/252 (3%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPL+ + G PV IGA KQR +LA LL+ RVV V+ L +WG+ PP A +LQ Sbjct: 19 VLGPLRALRGGDPVAIGAAKQRVLLASLLIDANRVVPVETLTARLWGEAPPCGARNALQN 78 Query: 61 YISNLRRAL--RDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQR 118 Y+ LRR L GSD P++ +P GY + +AVDL +F A ++A AV Sbjct: 79 YVMRLRRVLGGAGGSD------PVLTRPQGYLIGVADEAVDLHRFDALVRRARTAVAAGG 132 Query: 119 WVXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTA 178 WRG L D+ E E A E R V+ RI A LALGR Sbjct: 133 AEQASALLREALGLWRGQPLSDVPSELLQREVAPALAERRLGAVELRIQADLALGRHGDV 192 Query: 179 LAAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELREL 238 L + +L +A PL +R ML LYR+GR EAL Y ++L ELG+ PGAELREL Sbjct: 193 LPELRELTAAHPLRERFWAQRMLALYRSGRRGEALQCYRTVGELLSEELGIDPGAELREL 252 Query: 239 QTAILRQAPELA 250 +L P LA Sbjct: 253 HRRLLDADPALA 264 >tr|D3DBS9|D3DBS9_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, putative ATPase, winged helix family;[Frankia sp. EUN1f] Length = 1312 Score = 156 bits (395), Expect = 2e-35 Identities = 91/249 (36%), Positives = 132/249 (53%), Gaps = 3/249 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LG L G +D+G +QRAVL +L++A+G ++ DRLI +W D PP+ + +LQ+ Sbjct: 39 VLGDLTASRGGAELDLGGRRQRAVLGLLVVARGDAIAADRLIHLLWADHPPSGPSGALQS 98 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+S+LRRAL AS I+R GY L DAVD +F ++AA V+ V Sbjct: 99 YVSHLRRALEPERTARSRASIIIRSGSGYALRVAPDAVDAWRFEELVRRAAAEVDPDARV 158 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP + +DE W +AAR ELR + I A L G + + Sbjct: 159 ---AVLTAALGLWRGPAFGEYQDEPWAQPEAARLAELREVAREQLIEARLGRGETAVVVP 215 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + L + +PL + L +L LYR+ R +AL A R ++L ELG+ PG LR L+ Sbjct: 216 EIEALVAEQPLREERWRLFVLALYRSRRQGDALSALRRAREVLAAELGIDPGPALRALEA 275 Query: 241 AILRQAPEL 249 +LRQ+P L Sbjct: 276 EVLRQSPAL 284 Score = 60.1 bits (144), Expect = 2e-06 Identities = 72/261 (27%), Positives = 104/261 (39%), Gaps = 23/261 (8%) Query: 395 PAVVVIDDVQWADSTSASCLAYIAGALRDHPVAIVLTVRDVDHTAEVARLLATVARGDGN 454 P ++ +DD+QW DS S LAY+ PV IV TVR E LLA V Sbjct: 533 PIMLAVDDLQWCDSASLRFLAYLVRRTEGMPVLIVATVR-TGERGEDEGLLAEVTHDPAT 591 Query: 455 RHLALSSLSTDDVAALAN-QISEDVVDHAEAQILAERTGGNPFFVS--------EYARLP 505 + + L + VA L ++ D D A + T GNP ++ E R Sbjct: 592 VWIRPAPLGRNAVADLVRARLGTDAQDGFVA-ACHDATAGNPLYLRQLLRALLVEGVRPD 650 Query: 506 RAERGEIPV----AVKSVLDRRLAGLDPGVLAVLRVAAVIGDPIDADVVPVLARVAKIXX 561 A+ G + AV S++ RLA + + V R AV+G V+P +A +A + Sbjct: 651 SAQAGTVTTIGSRAVSSLVLMRLARMPRESITVARWIAVLG---GGAVLPTVAALAGLSD 707 Query: 562 XXXXXXXXXXXXERIVVNAHTGDGYTFAHGLLRDHLMAGLPALRRQRLHAQVAEVLAGNP 621 ++ + + F H L+ D + LP RQ H A VL Sbjct: 708 AATAAAVGALARAEVLRDDYP---LGFVHPLVADAVYRDLPPGERQLHHDSAARVL--YQ 762 Query: 622 SDDAITRRAQHLVAAQPLVDP 642 S A + A HL+ DP Sbjct: 763 SGAAPEQIAAHLLQVPHRGDP 783 >tr|D3PX22|D3PX22_STANL Tax_Id=446470 SubName: Full=Transcriptional regulator, winged helix family;[Stackebrandtia nassauensis] Length = 1097 Score = 152 bits (385), Expect = 2e-34 Identities = 116/347 (33%), Positives = 153/347 (44%), Gaps = 37/347 (10%) Query: 1 MLGPLQVVHS-GTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQ 59 +LGP +V+ + G VD+G P+ RA+ A L LA GR VS LID +WGD+PPA A+ +L Sbjct: 5 LLGPFEVLDADGRTVDVGGPRVRALAARLALADGRTVSAALLIDDLWGDNPPAGASGTLH 64 Query: 60 AYISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRW 119 +S LR AL D P+ +P GY L+A DA A +QA + Sbjct: 65 RLVSRLRSALPDTG----TGHPLRSEPGGYRLEATVDARRFEDLAASGRQALADTDP--- 117 Query: 120 VXXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTAL 179 WRGP L L + ++ AR +LR +HR A LALGR + Sbjct: 118 ATAARLLRDAERLWRGPALGGLGEAPYLTGATARLSDLRLRVSEHRFEAELALGRHAAVA 177 Query: 180 AAVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQ 239 V QL + PL +R L M Y GR EAL + R L + LG P EL + Sbjct: 178 TEVEQLAANHPLRERLQGLLMRVRYATGRQAEALAVFERVRAELADRLGADPSPELAAVH 237 Query: 240 TAILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXX 299 A+LRQ P+LA P P A +GR+ E Sbjct: 238 VAVLRQDPDLAPNPPHPT-------------------PSAALTSFVGRESELDQLRSLL- 277 Query: 300 XXXXGETRWLVLSGPPGIGKTRLAEEI-----TDGCDAEVVWVSCPD 341 G R + + GP G GKTRLA E+ DG + V +S D Sbjct: 278 ----GRERLVTILGPGGAGKTRLARELLVQLSPDGGETRFVELSMVD 320 >tr|D2AVA9|D2AVA9_STRRD Tax_Id=479432 SubName: Full=ATPase-like protein;[Streptosporangium roseum] Length = 960 Score = 152 bits (385), Expect = 2e-34 Identities = 141/462 (30%), Positives = 197/462 (42%), Gaps = 68/462 (14%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGP +V+ G PV I A K R +L LLL VV V+ L+D +WGDDPP A +LQ Sbjct: 10 VLGPFEVLRDGVPVPIRAAKLRTLLVSLLLDANEVVPVETLVDRLWGDDPPGGALNTLQN 69 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+ RR+L D P++ P GY + D +DL +F A ++A A Sbjct: 70 YVMRSRRSLGCAGDDG----PLLTCPRGYLIRVADDGLDLHRFDALTRRARAAATADAME 125 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRG L D++ E E A E R + + RI A LALGR + Sbjct: 126 QASALLGEALRLWRGEPLQDVQSEALRREVAPALAERRLDALQSRIEADLALGRHEEVVP 185 Query: 181 AVTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQT 240 + +L + PL +R ML LYR+GR EAL Y ++L ELG+ PGAELR+L Sbjct: 186 ELRKLTAGHPLRERFWAQRMLALYRSGRQAEALRCYHSVREVLVEELGVDPGAELRDLHR 245 Query: 241 AILRQAPELAAWPRSPEWTGXXXXXXXXXXXXXXXXXGAQRGLLIGRKREXXXXXXXXXX 300 IL P LA S A+ +GR R+ Sbjct: 246 RILDGDPALAVAGGS------------GHGAPASGNLPAEMTTFVGRGRQLADAGRLLE- 292 Query: 301 XXXGETRWLVLSGPPGIGKTRLAEEITDGCDAEVVWVSCPDERSTPPWWPMRQLVRALGA 360 +R + L+G G+GKTRLA + A V + PD W Sbjct: 293 ----SSRLVTLTGVGGVGKTRLALRV-----AAQVSHAFPD----GVW------------ 327 Query: 361 DADEVLEVPPHADPDTARFQVYERVQALLESTGRPAVVVIDDVQWADSTSASCLAYIAGA 420 + ++ P ADP+ LL+ A+ V D ++ C+ +AG Sbjct: 328 ----LADLAPLADPE------------LLDRAVAQALGV------RDQSARPCVDVLAGH 365 Query: 421 LRDHPVAIVLTVRDVDHTAE-VARLLATVARG-DGNRHLALS 460 LRD +VL + +H + A L+A + R G R LA S Sbjct: 366 LRDRRAMLVLD--NCEHMVDAAATLVAALLRAVPGLRVLATS 405 >sp|P66799|EMBR_MYCTU Tax_Id=1773 (embR)RecName: Full=Probable regulatory protein embR;[Mycobacterium tuberculosis] Length = 388 Score = 152 bits (383), Expect = 4e-34 Identities = 96/248 (38%), Positives = 127/248 (51%), Gaps = 4/248 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPLQ+ GTPV G PKQRAVLAML++ + R V VD LI A+W + PP+ A AS+ + Sbjct: 15 LLGPLQMTIDGTPVPSGTPKQRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHS 74 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+SNLR+ L +V + PPGY L P + DL +F A A R+ Sbjct: 75 YVSNLRKLLGGAGIDPRVV--LAAAPPGYRLSIPDNTCDLGRFVAEKTAGVHAAAAGRFE 132 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP LDDLRD Q+V A E + + A +A GR S +A Sbjct: 133 QASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 192 Query: 181 AVTQLRSAEPLSDRACWLHMLT-LYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQ 239 + L P + W ++T Y + R +AL AY R L ++LG+ PG LR L Sbjct: 193 ELEALTFEHPYRE-PLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALN 251 Query: 240 TAILRQAP 247 ILRQ P Sbjct: 252 ERILRQQP 259 >sp|P66800|EMBR_MYCBO Tax_Id=1765 (embR)RecName: Full=Probable regulatory protein embR;[Mycobacterium bovis] Length = 388 Score = 152 bits (383), Expect = 4e-34 Identities = 96/248 (38%), Positives = 127/248 (51%), Gaps = 4/248 (1%) Query: 1 MLGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQA 60 +LGPLQ+ GTPV G PKQRAVLAML++ + R V VD LI A+W + PP+ A AS+ + Sbjct: 15 LLGPLQMTIDGTPVPSGTPKQRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHS 74 Query: 61 YISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWV 120 Y+SNLR+ L +V + PPGY L P + DL +F A A R+ Sbjct: 75 YVSNLRKLLGGAGIDPRVV--LAAAPPGYRLSIPDNTCDLGRFVAEKTAGVHAAAAGRFE 132 Query: 121 XXXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALA 180 WRGP LDDLRD Q+V A E + + A +A GR S +A Sbjct: 133 QASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 192 Query: 181 AVTQLRSAEPLSDRACWLHMLT-LYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQ 239 + L P + W ++T Y + R +AL AY R L ++LG+ PG LR L Sbjct: 193 ELEALTFEHPYRE-PLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALN 251 Query: 240 TAILRQAP 247 ILRQ P Sbjct: 252 ERILRQQP 259 >tr|D2B4N8|D2B4N8_STRRD Tax_Id=479432 SubName: Full=Response regulator receiver protein;[Streptosporangium roseum] Length = 489 Score = 152 bits (383), Expect = 4e-34 Identities = 100/258 (38%), Positives = 131/258 (50%), Gaps = 7/258 (2%) Query: 2 LGPLQVVHSGTPVDIGAPKQRAVLAMLLLAQGRVVSVDRLIDAVWGDDPPASATASLQAY 61 LGP Q H +D+G +Q AVLA LL+A GR V V LID +W +PPA A +++Q Y Sbjct: 7 LGPFQARHGDVVLDLGGQRQMAVLARLLVAGGRAVPVSMLIDELWPGEPPAQALSTIQGY 66 Query: 62 ISNLRRALRDGSDTAQVASPIVRQPPGYYLDAPADAVDLAQFTAGCQQAAQAVEEQRWVX 121 +S LRRAL G + A +V PPGY L A VD +F + + W Sbjct: 67 VSRLRRALEPGRAPREEAEVLVSAPPGYALRAAPGQVDSWRFERAVKMEGEPA--AAW-- 122 Query: 122 XXXXXXXXXXXWRGPFLDDLRDEQWVHEDAARAGELRSECVDHRITALLALGRVSTALAA 181 WRGP L + D W +A R ELR V+ R A L LG+ +A Sbjct: 123 --ERLNDALALWRGPALAEFSDLPWAVTEAGRLEELRLIAVERRADAGLLLGQSGALVAD 180 Query: 182 VTQLRSAEPLSDRACWLHMLTLYRAGRAPEALDAYTRHAQMLDNELGLVPGAELRELQTA 241 + SA PL + A L L LYR+GR +AL A R ML +ELGL GA L+ L++ Sbjct: 181 LEAHASAHPLREEAWRLLALALYRSGRQGDALGALRRARVMLRDELGLDLGATLQRLESD 240 Query: 242 ILRQAPELAAWPRSPEWT 259 +L QA L P +P+ T Sbjct: 241 MLSQAAHLDL-PAAPKET 257 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.319 0.134 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 8,356,899,474 Number of extensions: 332974990 Number of successful extensions: 977010 Number of sequences better than 10.0: 2324 Number of HSP's gapped: 979132 Number of HSP's successfully gapped: 2434 Length of query: 1132 Length of database: 4,236,830,644 Length adjustment: 149 Effective length of query: 983 Effective length of database: 2,373,158,908 Effective search space: 2332815206564 Effective search space used: 2332815206564 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 87 (38.1 bits)