BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_1995
         (227 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QTX1|A0QTX1_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   442   e-122
tr|D1A661|D1A661_THECD Tax_Id=471852 SubName: Full=Transcription...   213   1e-53
tr|D5PGN7|D5PGN7_9MYCO Tax_Id=525368 SubName: Full=Transcription...   172   4e-41
tr|Q73XA5|Q73XA5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   171   6e-41
tr|A0QUH5|A0QUH5_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   171   8e-41
tr|A0QD22|A0QD22_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   170   1e-40
tr|A4TDN6|A4TDN6_MYCGI Tax_Id=350054 SubName: Full=Transcription...   165   4e-39
tr|A1T6J7|A1T6J7_MYCVP Tax_Id=350058 SubName: Full=Transcription...   164   6e-39
tr|A4FLE1|A4FLE1_SACEN Tax_Id=405948 SubName: Full=Transcription...   163   2e-38
tr|D6KDD9|D6KDD9_9ACTO Tax_Id=645465 SubName: Full=Transcription...   162   3e-38
tr|D3C6K6|D3C6K6_9ACTO Tax_Id=648999 SubName: Full=Transcription...   162   3e-38
tr|D1S6U8|D1S6U8_9ACTO Tax_Id=644283 SubName: Full=Transcription...   162   3e-38
tr|D1A3B7|D1A3B7_THECD Tax_Id=471852 SubName: Full=Transcription...   159   2e-37
tr|B2HQE4|B2HQE4_MYCMM Tax_Id=216594 SubName: Full=Transcription...   159   2e-37
tr|D6KDE7|D6KDE7_9ACTO Tax_Id=645465 SubName: Full=Transcription...   159   2e-37
tr|D3D118|D3D118_9ACTO Tax_Id=102897 SubName: Full=Transcription...   159   2e-37
tr|D6KDI5|D6KDI5_9ACTO Tax_Id=645465 SubName: Full=GntR family t...   157   7e-37
tr|D3D0C6|D3D0C6_9ACTO Tax_Id=102897 SubName: Full=Transcription...   157   9e-37
tr|D6KDG0|D6KDG0_9ACTO Tax_Id=645465 SubName: Full=GntR family t...   157   1e-36
tr|A0PUF0|A0PUF0_MYCUA Tax_Id=362242 SubName: Full=Transcription...   156   2e-36
tr|Q0SCA2|Q0SCA2_RHOSR Tax_Id=101510 SubName: Full=Transcription...   152   4e-35
tr|Q0FW25|Q0FW25_9RHOB Tax_Id=314265 SubName: Full=Putative unch...   151   5e-35
tr|C1B5E5|C1B5E5_RHOOB Tax_Id=632772 SubName: Full=Putative GntR...   151   7e-35
tr|D6KDE6|D6KDE6_9ACTO Tax_Id=645465 SubName: Full=Transcription...   150   9e-35
tr|Q1BB65|Q1BB65_MYCSS Tax_Id=164756 SubName: Full=Transcription...   149   3e-34
tr|A3PXA4|A3PXA4_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   149   3e-34
tr|A1UDV0|A1UDV0_MYCSK Tax_Id=189918 SubName: Full=Transcription...   149   3e-34
tr|C1B5E1|C1B5E1_RHOOB Tax_Id=632772 SubName: Full=Putative GntR...   148   6e-34
tr|C5T151|C5T151_ACIDE Tax_Id=573060 SubName: Full=Transcription...   145   5e-33
tr|C1AZZ2|C1AZZ2_RHOOB Tax_Id=632772 SubName: Full=Putative GntR...   143   2e-32
tr|C0ZSM6|C0ZSM6_RHOE4 Tax_Id=234621 SubName: Full=Putative GntR...   142   3e-32
tr|Q0S3K0|Q0S3K0_RHOSR Tax_Id=101510 SubName: Full=Possible tran...   142   4e-32
tr|C5T170|C5T170_ACIDE Tax_Id=573060 SubName: Full=Transcription...   141   5e-32
tr|C3JN85|C3JN85_RHOER Tax_Id=596309 SubName: Full=Transcription...   140   2e-31
tr|D5PR98|D5PR98_COREQ Tax_Id=525370 SubName: Full=Transcription...   137   8e-31
tr|D5PAM7|D5PAM7_9MYCO Tax_Id=525368 SubName: Full=Transcription...   132   2e-29
tr|Q73TW9|Q73TW9_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   132   4e-29
tr|A0QNQ8|A0QNQ8_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   127   1e-27
tr|A0PMT4|A0PMT4_MYCUA Tax_Id=362242 SubName: Full=Transcription...   126   2e-27
tr|A0QMK1|A0QMK1_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   125   3e-27
tr|B2HMT6|B2HMT6_MYCMM Tax_Id=216594 SubName: Full=Transcription...   125   4e-27
tr|Q7U2P3|Q7U2P3_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC...   124   9e-27
tr|C1AJJ0|C1AJJ0_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   124   9e-27
tr|A1KEY5|A1KEY5_MYCBP Tax_Id=410289 SubName: Full=Possible tran...   124   9e-27
tr|D5YZ16|D5YZ16_MYCTU Tax_Id=515616 SubName: Full=GntR family t...   124   9e-27

>tr|A0QTX1|A0QTX1_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator MdcY family protein;[Mycobacterium smegmatis]
          Length = 227

 Score =  442 bits (1136), Expect = e-122
 Identities = 227/227 (100%), Positives = 227/227 (100%)

Query: 1   MRPTAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL 60
           MRPTAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL
Sbjct: 1   MRPTAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL 60

Query: 61  LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI 120
           LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI
Sbjct: 61  LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI 120

Query: 121 QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE 180
           QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE
Sbjct: 121 QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE 180

Query: 181 ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTLG 227
           ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTLG
Sbjct: 181 ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTLG 227


>tr|D1A661|D1A661_THECD Tax_Id=471852 SubName: Full=Transcriptional
           regulator, GntR family;[Thermomonospora curvata]
          Length = 258

 Score =  213 bits (543), Expect = 1e-53
 Identities = 112/224 (50%), Positives = 149/224 (66%), Gaps = 3/224 (1%)

Query: 6   ATDRKRTPPL---RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLL 62
           A +  R P L   +LS+  A HVRE I+ G+LRA  +IR E +A +LG+SATP RE L++
Sbjct: 29  AAEIARRPALDGRQLSERVAGHVREAIMIGELRAPAYIRTEHLAAELGVSATPVREALMI 88

Query: 63  LQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQA 122
           L +EG +  EPR+GF V  L+  D+ D++D QA L GEL ARAA  +  E ++ LE +Q+
Sbjct: 89  LHSEGAVRWEPRRGFRVLPLTERDVADLFDVQAHLAGELAARAATALPEEELDRLEGVQS 148

Query: 123 QLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEAS 182
           +LEQAA   D + V+RLNH  H+TI R SGS ++  L+K+T+ Y P +FF  VEGWPEAS
Sbjct: 149 RLEQAARDGDAELVDRLNHEIHRTINRSSGSHRLTALLKSTVHYVPLRFFGTVEGWPEAS 208

Query: 183 AHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
           A DH  I+  LR+ D E AR AM+ HIR  G LL +HL A G L
Sbjct: 209 ARDHAPILAALRARDPEAARTAMSAHIRHVGRLLIDHLRARGVL 252


>tr|D5PGN7|D5PGN7_9MYCO Tax_Id=525368 SubName: Full=Transcriptional
           regulator;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 230

 Score =  172 bits (435), Expect = 4e-41
 Identities = 92/211 (43%), Positives = 125/211 (59%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LSD  A  +R+ I  G  RA  ++R + +A +LGIS TP RE L  L+ EG +  +PR+
Sbjct: 11  QLSDDVARLIRQRIFDGTYRADSYVRLDQLAAELGISVTPVREALFALRAEGLIAQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  D+ DV + QA +GGEL ARAA  IT + + EL+ IQA+LE A AG D + 
Sbjct: 71  GFMVLPVTGRDVTDVANVQAHVGGELAARAALNITDDQLSELKQIQAELEDAYAGDDDER 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
              LNH+FH+ I   + S K+  L+     YAP   F A+EGWPE S  DHR I+  LR 
Sbjct: 131 TVLLNHQFHRAINVAADSPKLAQLMSQITRYAPESVFPAIEGWPEQSMRDHRRILSALRK 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D   AR AM+QH+      L +HL A G +
Sbjct: 191 RDGRLARSAMSQHLAAGAVPLIDHLTARGVV 221


>tr|Q73XA5|Q73XA5_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 230

 Score =  171 bits (433), Expect = 6e-41
 Identities = 91/211 (43%), Positives = 127/211 (60%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LSD  A  +R  I  G   AG ++R + +A +LGIS TP RE L  L+ EG ++ +PR+
Sbjct: 11  QLSDDVAHLIRGRIFDGSYAAGSYVRLDQLAAELGISVTPVREALFALRAEGLISQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  D+ DV + QA +GGEL ARAA  IT + + EL+ IQAQLE A AG +++ 
Sbjct: 71  GFVVLPVTRRDVTDVANVQAHVGGELAARAAVNITDDQLRELKQIQAQLEDAYAGDEHER 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ I   + S K+  L+     YAP   F A+EGWPE S  DHR I+  L+ 
Sbjct: 131 TVRLNHEFHRAINIAADSPKLAQLMSQITRYAPESVFPAIEGWPEQSMKDHRRILSALKK 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D + AR AM++H+      L +HL A G +
Sbjct: 191 RDDKLARAAMSEHLAAGAVPLIDHLVARGVV 221


>tr|A0QUH5|A0QUH5_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, GntR family protein;[Mycobacterium smegmatis]
          Length = 222

 Score =  171 bits (432), Expect = 8e-41
 Identities = 96/211 (45%), Positives = 126/211 (59%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +L++  A  +R  I  G   AG++IR + +A +LGIS TP RE L  L+TEG L  +PR+
Sbjct: 11  QLAEDVARLIRRRIFDGTYPAGKYIRLDQLAAELGISVTPVREALFGLRTEGLLAQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  DI DV   QA +GG+L ARAAG IT   +EEL  IQ +LEQA A  D++ 
Sbjct: 71  GFIVLPVTRRDIDDVAGVQAHIGGQLAARAAGQITDAQLEELGRIQDELEQAYARDDHEA 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ + R + S K+  L+     YA    +  VEGWPE S HDHR I++ L  
Sbjct: 131 AVRLNHAFHRGVNRAAESPKLAQLMSQITRYALESVYPTVEGWPEQSTHDHRRILDALGR 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D E AR AMA H+  A   L +HLA  G L
Sbjct: 191 HDGELARAAMADHLCAASKPLIDHLARLGVL 221


>tr|A0QD22|A0QD22_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, GntR family protein;[Mycobacterium avium]
          Length = 230

 Score =  170 bits (430), Expect = 1e-40
 Identities = 90/211 (42%), Positives = 127/211 (60%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LSD  A  +R  I  G   AG ++R + +A +LGIS TP RE L  L+ EG ++ +PR+
Sbjct: 11  QLSDDVAHLIRGRIFDGSYAAGSYVRLDQLAAELGISVTPVREALFALRAEGLISQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  D+ DV + QA +GGEL ARAA  IT + + EL+ IQAQLE A AG +++ 
Sbjct: 71  GFVVLPVTRRDVTDVANVQAHVGGELAARAAVNITDDQLRELKQIQAQLEDAYAGDEHER 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ I   + S K+  L+     YAP   F A++GWPE S  DHR I+  L+ 
Sbjct: 131 TVRLNHEFHRAINIAADSPKLAQLMSQITRYAPESVFPAIQGWPEQSMKDHRRILSALKK 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D + AR AM++H+      L +HL A G +
Sbjct: 191 RDDKLARAAMSEHLAAGAVPLIDHLVARGVV 221


>tr|A4TDN6|A4TDN6_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium gilvum]
          Length = 222

 Score =  165 bits (417), Expect = 4e-39
 Identities = 90/212 (42%), Positives = 125/212 (58%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +L++  A  VR  I  G   AG +IR E +A +LGIS TP RE L  L+ EG LT +PR+
Sbjct: 11  QLAEDVARFVRRRIFDGTYPAGRYIRLEQLAAELGISVTPVREALFGLRAEGLLTQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V+ ++  DI DV D QA +GG L +RAA +IT E + ELE IQ +LE A    D++ 
Sbjct: 71  GFVVSPITERDIADVSDVQAHIGGVLASRAAELITDEQLAELERIQDELEAAYDAVDHEA 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ +   +GS K+  L+     +A    +  VEGWP  S +DHR ++  LR 
Sbjct: 131 AVRLNHAFHRGVNIAAGSPKLAQLMGQITRFALESVYPTVEGWPAHSMNDHRVLLAALRK 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTLG 227
            D   AR+AM++H+  A   L +HL   G +G
Sbjct: 191 RDGTAARDAMSEHLCAAAGPLIDHLTTRGVIG 222


>tr|A1T6J7|A1T6J7_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium vanbaalenii]
          Length = 222

 Score =  164 bits (416), Expect = 6e-39
 Identities = 89/211 (42%), Positives = 126/211 (59%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +L++  A  VR  I  G   AG++IR E +AD+LGIS TP RE L  L+ EG LT +PR+
Sbjct: 11  QLAEDVARFVRRRIFEGTYPAGQYIRLEQLADELGISVTPVREALFGLRAEGLLTQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  DI DV D QA +GG L +RAA  IT E ++ L+++Q QLE A    D++ 
Sbjct: 71  GFVVLPITRRDIADVADVQAHIGGVLASRAAERITDEQLQALDHVQDQLEVAYHADDHEA 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ +   +GS K+  L+     +A    +  VEGWP  S  DHR ++  L++
Sbjct: 131 AVRLNHEFHRGVNVAAGSPKLAQLMGQITKFALESVYPTVEGWPAHSTRDHRELLAALKA 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D+E AR AM++H+  A   L EHL   G +
Sbjct: 191 RDSEAARAAMSEHLCAASGPLIEHLTRRGVI 221


>tr|A4FLE1|A4FLE1_SACEN Tax_Id=405948 SubName: Full=Transcriptional
           regulator, GntR family;[Saccharopolyspora erythraea]
          Length = 221

 Score =  163 bits (412), Expect = 2e-38
 Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 2/209 (0%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +L +  AA +RE I++G+LR G  +  E +AD+LG+S TP RE LL L+ EGF+ ++PR+
Sbjct: 9   QLPEEVAAWIRERILTGRLRGGAHLHLERLADELGVSVTPVREALLALRGEGFVELQPRR 68

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF+V  L+  D+ D +  QA L GEL ARAA  I  + +  LE + A++E  +AG+   +
Sbjct: 69  GFTVVPLTRRDVEDTHRLQATLAGELAARAARDIGPQQLARLEALYAEME--SAGRCGGE 126

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           ++ L   FH  +  ++ S K+ W +   L Y PR+F + V GW + +  DHR I+  LR+
Sbjct: 127 IDELALLFHHELNSVADSGKLAWFLGIALRYTPRRFTSGVPGWRDMAVADHREILVALRN 186

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
            D  GAR AM +H+   G LL  HL  SG
Sbjct: 187 HDPYGARAAMHKHVTHTGRLLTHHLEQSG 215


>tr|D6KDD9|D6KDD9_9ACTO Tax_Id=645465 SubName: Full=Transcriptional
           regulator, GntR family protein;[Streptomyces sp. e14]
          Length = 246

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/203 (40%), Positives = 128/203 (63%)

Query: 22  AAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRKGFSVTA 81
           A HVRELI+SG++R G F+R E +A+  G+S+TPAREGLL+L++EG + + PR+GF V  
Sbjct: 25  AGHVRELILSGEVRPGAFLRVERIAEATGVSSTPAREGLLVLRSEGLVRLVPRRGFMVAP 84

Query: 82  LSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDDVERLNH 141
            + +D+RD++ AQA L G+L ARAA +IT E +  LE +  + + A A  +   +  L H
Sbjct: 85  FTRQDVRDLFWAQAQLSGQLAARAARLITPEQIGRLEAVLEEFQSAVAVGEPQHITALGH 144

Query: 142 RFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRSGDAEGA 201
           RFH+ I   + +R++  L+++ + + P +F+AA+EG   A+  +H  ++E LR  DA  A
Sbjct: 145 RFHREINLAADARRLALLLRSVVRHLPDRFYAAIEGQVAATRTEHPELVEALRGHDAHRA 204

Query: 202 REAMAQHIRRAGTLLAEHLAASG 224
            E M +HI      L E L   G
Sbjct: 205 GELMREHILAGADRLIEVLEERG 227


>tr|D3C6K6|D3C6K6_9ACTO Tax_Id=648999 SubName: Full=Transcriptional
           regulator, GntR family;[Micromonospora sp. L5]
          Length = 226

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/209 (40%), Positives = 123/209 (58%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+  A+ +R+ I+SGQLR GE IR E VA + G+S TP RE LL+L+ E  + ++PR+
Sbjct: 14  QLSETVASLLRDRIMSGQLRPGERIRLEEVAQETGLSITPVREALLMLRAEDMVELQPRR 73

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           G  V  LS +DI DV+  Q  + GEL AR A  IT E +++L     +L +AA  +    
Sbjct: 74  GHVVAPLSRQDIIDVFSLQGHIAGELAARVAVSITPEQLDDLRQQHERLRRAAQARQVSR 133

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           VE+L + FH+ I RL+ +RK+ WL++    Y P +F+AA   W      DH A+++ L +
Sbjct: 134 VEQLEYEFHRRINRLADARKLSWLLRTVTRYTPSRFYAADAEWRAGMVADHEALLDALAA 193

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
           GD E  R  MA+H       L +HL   G
Sbjct: 194 GDPEAVRPVMARHFTDGAERLVKHLDGLG 222


>tr|D1S6U8|D1S6U8_9ACTO Tax_Id=644283 SubName: Full=Transcriptional
           regulator, GntR family;[Micromonospora aurantiaca ATCC
           27029]
          Length = 226

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/209 (40%), Positives = 123/209 (58%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+  A+ +R+ I+SGQLR GE IR E VA + G+S TP RE LL+L+ E  + ++PR+
Sbjct: 14  QLSETVASLLRDRIMSGQLRPGERIRLEEVAQETGLSITPVREALLMLRAEDMVELQPRR 73

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           G  V  LS +DI DV+  Q  + GEL AR A  IT E +++L     +L +AA  +    
Sbjct: 74  GHVVAPLSRQDIIDVFSLQGHIAGELAARVAVSITPEQLDDLRQQHERLRRAAQARQVSR 133

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           VE+L + FH+ I RL+ +RK+ WL++    Y P +F+AA   W      DH A+++ L +
Sbjct: 134 VEQLEYEFHRRINRLADARKLSWLLRTVTRYTPSRFYAADAEWRAGMVADHEALLDALAA 193

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
           GD E  R  MA+H       L +HL   G
Sbjct: 194 GDPEAVRPVMARHFTDGAERLVKHLDGLG 222


>tr|D1A3B7|D1A3B7_THECD Tax_Id=471852 SubName: Full=Transcriptional
           regulator, GntR family;[Thermomonospora curvata]
          Length = 226

 Score =  159 bits (403), Expect = 2e-37
 Identities = 84/209 (40%), Positives = 119/209 (56%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +L D  AA +RE I+ G++R G+++R E +A + GIS TP RE L  L+++GF+ +EPR+
Sbjct: 13  QLGDEVAARLREQIMEGRIRPGQYLRLERLAAEFGISVTPVREALQSLRSQGFVLLEPRR 72

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  LS +D++D++  QA +  EL ARAA  +T   + EL  IQ  + ++      D 
Sbjct: 73  GFVVAPLSRQDVQDLFWVQADIAAELAARAATTLTTGTLRELNAIQHAMGRSVEAGRIDL 132

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           VE  NH FH+ I   + S K+ W + A   Y PR  +  +  WP  +  DHR I+  LR 
Sbjct: 133 VEEHNHDFHRCINLAARSAKLAWSLGAVARYVPRGLYGRLPDWPRIALEDHRRILAALRE 192

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
            D E    AM  HI RAG LL  HL   G
Sbjct: 193 ADPEETGAAMRAHIMRAGELLIAHLERQG 221


>tr|B2HQE4|B2HQE4_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Probably GntR-family);[Mycobacterium
           marinum]
          Length = 237

 Score =  159 bits (402), Expect = 2e-37
 Identities = 88/220 (40%), Positives = 125/220 (56%)

Query: 7   TDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTE 66
           TD +     +LSD  A +VR+ I  G   AG++IR + +A +LGIS TP RE L  L+ E
Sbjct: 2   TDPEFAARPQLSDDVARYVRKRIYEGNYAAGKYIRLDQLAAELGISVTPVREALFALRAE 61

Query: 67  GFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQ 126
           G +  +P +GF V  L+  D+ DV   QA +GGEL ARAA  I A  + EL+ IQAQLE+
Sbjct: 62  GLVAQQPHRGFVVLPLTKRDLADVAYVQAHVGGELAARAAINIGAAQLAELQQIQAQLEE 121

Query: 127 AAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDH 186
           A A  D +   RLNH FH+ I   + S ++  L+     Y P   F  +E WP  +  DH
Sbjct: 122 AYAADDDERTVRLNHEFHRAINLAADSPRLSQLMSQITRYQPESVFPGIEHWPARAVKDH 181

Query: 187 RAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
           R ++  L+  D + AR AM++H+  +   L +HL A G +
Sbjct: 182 RRVLVALKKHDDKAARTAMSEHLASSAVPLIDHLIARGVV 221


>tr|D6KDE7|D6KDE7_9ACTO Tax_Id=645465 SubName: Full=Transcriptional
           regulator, GntR family protein;[Streptomyces sp. e14]
          Length = 251

 Score =  159 bits (402), Expect = 2e-37
 Identities = 87/208 (41%), Positives = 125/208 (60%)

Query: 17  LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRKG 76
           + D  A++VRELI+SG++RAGEF+R + +A  +G+S TP REGLL L++EGF+ + PR+G
Sbjct: 35  IPDEVASYVRELIISGEVRAGEFLRIDLIAAAIGVSNTPVREGLLTLRSEGFVQLVPRRG 94

Query: 77  FSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDDV 136
           F V   + ED+ D++  QA L GEL ARAA  ITAE V ELE+I A   +A    D + +
Sbjct: 95  FVVVPFTREDLHDLFWTQAQLAGELAARAAVRITAEAVAELESILAAHIRAVEAGDRERI 154

Query: 137 ERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRSG 196
             L H FH+ I R +GS ++  L+   +P  PR+F  A EG   A   +H  +++ LR  
Sbjct: 155 TDLGHAFHRRINRAAGSHRLTLLLDTVVPRVPRRFRGAAEGCGGAVLDEHPLLLDALRRH 214

Query: 197 DAEGAREAMAQHIRRAGTLLAEHLAASG 224
            A  AR  M +HI      + + L   G
Sbjct: 215 QAHRARTLMERHIDAGAGQVLDALERQG 242


>tr|D3D118|D3D118_9ACTO Tax_Id=102897 SubName: Full=Transcriptional
           regulator, GntR family;[Frankia sp. EUN1f]
          Length = 270

 Score =  159 bits (402), Expect = 2e-37
 Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 4/228 (1%)

Query: 1   MRPTAATDRKRTPPL----RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPA 56
           M   A T R R  PL    +L+D  AAH+R+LI+SG++  G++IR + VA +LG+S TP 
Sbjct: 27  MTRPAGTRRARGTPLPRAPQLADEVAAHLRDLIMSGEIWPGQYIRLDDVARELGVSVTPV 86

Query: 57  REGLLLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEE 116
           RE L+ L++E  + +EPR+G+ VT LS +D+RD+++ Q  + GEL ARAA  I    + +
Sbjct: 87  REALVRLRSEDMVELEPRRGYVVTPLSQQDVRDLFNLQGHIAGELAARAATTIDPPHLTQ 146

Query: 117 LENIQAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVE 176
           L +IQ  L  A   +D D V++L   FH+ I RL+ +RK+ W +     Y P +F++  +
Sbjct: 147 LHDIQQALRNAVDTEDIDQVKKLEFEFHRVINRLAHARKLSWFLHTANRYTPARFYSTDQ 206

Query: 177 GWPEASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
            W       H A++  L + + E AR    +H       L  HLA  G
Sbjct: 207 AWRADMLQRHDALLTALENKNTEEARAITVRHFTDGADRLINHLAKLG 254


>tr|D6KDI5|D6KDI5_9ACTO Tax_Id=645465 SubName: Full=GntR family
           transcriptional regulator;[Streptomyces sp. e14]
          Length = 251

 Score =  157 bits (398), Expect = 7e-37
 Identities = 83/209 (39%), Positives = 127/209 (60%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+  A +VRELI+SG+++ GEF+R E +A+ +G+S TP REGLL L +EGF+ + PR+
Sbjct: 35  QLSEEVAGYVRELIISGEVKPGEFLRMEPIAEAVGVSNTPVREGLLTLSSEGFIELVPRR 94

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF VT+ + +DIRD++  QA LGGEL ARAA  IT   ++ LE +  Q ++A    D + 
Sbjct: 95  GFRVTSFTQQDIRDLFWVQAQLGGELAARAATKITEAQLDHLETLAKQQQEAIDAGDEEG 154

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           +    H FH+ I   + S ++  L+++ +   P +F+ ++EG   A+  +H  IIE LR 
Sbjct: 155 MVDHGHDFHRQINLAADSHRLALLLRSAVRQLPNRFYLSIEGRTAAAREEHPLIIEALRR 214

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
                AR  M QH  ++   L E L   G
Sbjct: 215 RSTRMARSLMEQHTLQSADHLIETLEERG 243


>tr|D3D0C6|D3D0C6_9ACTO Tax_Id=102897 SubName: Full=Transcriptional
           regulator, GntR family;[Frankia sp. EUN1f]
          Length = 231

 Score =  157 bits (397), Expect = 9e-37
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 4/227 (1%)

Query: 2   RPTAATDRKRTPPL----RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAR 57
           RP      +R  PL    +L+D  AAH+R+LI+SG++  G++IR + VA +LG+S TP R
Sbjct: 3   RPAGTPRTRRGTPLPRAPQLADEVAAHLRDLIMSGEIWPGQYIRLDDVARELGVSVTPVR 62

Query: 58  EGLLLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEEL 117
           E L+ L++E  + +EPR+G+ VT LS +D+RD+++ Q  + GEL ARAA  I    + +L
Sbjct: 63  EALVRLRSEDMVELEPRRGYVVTPLSQQDVRDLFNLQGHIAGELAARAATTIDPPHLTQL 122

Query: 118 ENIQAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEG 177
            +IQ  L  A   ++ D +E+L   FH+ I RL+ +RK+ W +     Y P +F++  + 
Sbjct: 123 HDIQQALRNAVDTENVDQIEQLEFEFHRVINRLAHARKLSWFLHTANRYTPARFYSTDQA 182

Query: 178 WPEASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
           W       H A++  L + + E AR    +H       L  HLA  G
Sbjct: 183 WRADMLQRHDALLTALENKNTEEARAITVRHFTDGADRLINHLAKLG 229


>tr|D6KDG0|D6KDG0_9ACTO Tax_Id=645465 SubName: Full=GntR family
           transcriptional regulator;[Streptomyces sp. e14]
          Length = 249

 Score =  157 bits (396), Expect = 1e-36
 Identities = 83/209 (39%), Positives = 127/209 (60%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+  A +VRELI+SG+++ GEF+R E +A+ +G+S TP REGLL L +EGF+ + PR+
Sbjct: 31  QLSEEVAGYVRELIISGEVKPGEFLRMEPIAEAVGVSNTPVREGLLTLSSEGFIELVPRR 90

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF VT+ + +DIRD++  QA LGGEL ARAA  IT   ++ LE +  Q ++A    D + 
Sbjct: 91  GFRVTSFTQQDIRDLFWVQAQLGGELAARAATKITEAQLDHLETLAKQQQEAIDAGDEEG 150

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           +    H FH+ I   + S ++  L+++ +   P +F+ ++EG   A+  +H  IIE LR 
Sbjct: 151 MVDHGHDFHRQINLAADSHRLALLLRSAVRQLPNRFYLSIEGRAAAAREEHPLIIEALRR 210

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
             A  AR    QH  ++   L E L   G
Sbjct: 211 RSARMARSLTEQHTLQSADHLIETLEERG 239


>tr|A0PUF0|A0PUF0_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein (Probably GntR-family);[Mycobacterium
           ulcerans]
          Length = 237

 Score =  156 bits (395), Expect = 2e-36
 Identities = 87/220 (39%), Positives = 124/220 (56%)

Query: 7   TDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTE 66
           TD +     +LSD  A +VR+ I  G   AG++IR + +A +LGIS TP RE L  L+ E
Sbjct: 2   TDPEFAARPQLSDDVARYVRKRIYEGNYAAGKYIRLDQLAAELGISVTPVREALFALRAE 61

Query: 67  GFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQ 126
           G +  +P +GF V  L+  D+ DV   QA +GGEL ARAA  I A  + EL+ IQAQLE+
Sbjct: 62  GLVAQQPHRGFVVLPLTKRDLADVAYVQAHVGGELAARAAINIGAAQLAELQQIQAQLEE 121

Query: 127 AAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDH 186
           A A  D +   RLNH FH+ I   + S ++  L+     Y P   F  +E WP  +  DH
Sbjct: 122 AYAADDDERTVRLNHEFHRAINLAADSPRLSQLMSQITRYQPESVFPGIEHWPARAVKDH 181

Query: 187 RAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
             ++  L+  D + AR AM++H+  +   L +HL A G +
Sbjct: 182 GQVLVALKKHDDKAARTAMSEHLASSAVPLIDHLIARGVV 221


>tr|Q0SCA2|Q0SCA2_RHOSR Tax_Id=101510 SubName: Full=Transcriptional
           regulator, GntR family protein;[Rhodococcus sp.]
          Length = 242

 Score =  152 bits (383), Expect = 4e-35
 Identities = 81/209 (38%), Positives = 125/209 (59%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +L +  A++VRE+I+SG +RAG+F+R E +A+ +G+S TP REGLL L++EGF+ + PR+
Sbjct: 23  QLPEEVASYVREMIISGDVRAGDFLRIERIAEAVGVSTTPVREGLLTLRSEGFVELIPRR 82

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V   + +D+RD++ AQA L GEL AR A  IT + V ELE I  Q + A A  D + 
Sbjct: 83  GFVVAPFTKQDVRDLFWAQAQLAGELAARTAKNITPQQVAELEGILQQHQDAIARGDTER 142

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           +  L H FH+ I   + S ++  L+ + +   P +F+A +EG    +  +H  ++E LR 
Sbjct: 143 IASLGHAFHRKINLTADSPRLARLLGSVVTNLPNRFYATIEGHITTTQQEHPVLLEALRK 202

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
             ++ A+  M  HI      L E L   G
Sbjct: 203 HASKRAKTLMESHILDGADHLIEGLEQRG 231


>tr|Q0FW25|Q0FW25_9RHOB Tax_Id=314265 SubName: Full=Putative
           uncharacterized protein;[Roseovarius sp. HTCC2601]
          Length = 280

 Score =  151 bits (382), Expect = 5e-35
 Identities = 81/209 (38%), Positives = 122/209 (58%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS   A++VRELI+SG+ R  +++R +T+A  +GIS+TP REGLL+LQ EGF+ + PR 
Sbjct: 60  QLSQDVASYVRELIISGRARRDDYLRIDTIAKAMGISSTPVREGLLMLQLEGFVKLVPRH 119

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  +  +D+ D++ AQ +L GEL ARAA   + + + ELE +     +A A  D   
Sbjct: 120 GFRVVGVEPQDVLDIFWAQGVLAGELAARAAMRASEDELSELEALIEAHSRAVAAGDEPS 179

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RL H+FH+ +   + S ++  L+       P +F+  +EG  E S   H  I+E +R 
Sbjct: 180 YTRLGHQFHRAVNLAARSNRLANLLGNMTKQLPNQFYGKIEGQIEGSLEYHPRILEAIRG 239

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
            DAE AR  M +HI   G  L ++L   G
Sbjct: 240 RDAEAARAQMVEHIVSGGDALVQYLEDQG 268


>tr|C1B5E5|C1B5E5_RHOOB Tax_Id=632772 SubName: Full=Putative GntR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 234

 Score =  151 bits (381), Expect = 7e-35
 Identities = 78/206 (37%), Positives = 127/206 (61%), Gaps = 4/206 (1%)

Query: 17  LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRKG 76
           L +  A++VRE I SG+++ GEF+R E + + +G+S TP REG+ LL++EGF+ + PR+G
Sbjct: 19  LPEQVASYVRERIFSGEVKPGEFLRMEPICEAVGVSNTPVREGMQLLRSEGFVQMVPRRG 78

Query: 77  FSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDDV 136
           F V + +  DIRD++ AQA L GEL ARAA  I+ E +  L+ I A+ ++A A  D   +
Sbjct: 79  FIVASFTRRDIRDLFWAQAQLAGELAARAASNISPEQLARLDQIMAENKEAVAAGDNQRI 138

Query: 137 ERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRSG 196
             L H FH+ I   + S ++  L+ + + + P +F+A +E   +A+ ++H  ++E LR+ 
Sbjct: 139 TDLGHEFHRQINLAADSHRLALLLGSVVKHLPNRFYATIEQQVDATVNEHPQLVEALRTR 198

Query: 197 DAEGAREAMAQHIRRAGTLLAEHLAA 222
           +   AR  M +HI       A+HL A
Sbjct: 199 NTRAARSMMKKHI----ATTADHLIA 220


>tr|D6KDE6|D6KDE6_9ACTO Tax_Id=645465 SubName: Full=Transcriptional
           regulator MdcY family protein;[Streptomyces sp. e14]
          Length = 242

 Score =  150 bits (380), Expect = 9e-35
 Identities = 80/209 (38%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+   AH+R LI SG +R G+F+R E +A++LG+S TP REG+L L +EG + + PR+
Sbjct: 26  QLSEEVMAHIRNLIFSGGVRRGDFLRLEPIAEELGVSTTPVREGMLALASEGLVELIPRR 85

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  L+ ED++D+  AQA + GEL AR+A  IT   VE L  IQ + ++AA   ++ +
Sbjct: 86  GFVVVGLTREDVQDLLWAQAAIAGELAARSARKITDRGVEHLVVIQERHDRAAREGEFAE 145

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           ++RL H FH+ +   + + ++  L+ ATL + P++F A        + H H  I++ LR 
Sbjct: 146 LDRLGHEFHRYVNVTAAAPRLAQLLGATLQHMPQRFVAP---HVRVTLHQHLEILDALRR 202

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
            D  G R  M +H   AG  +  H+   G
Sbjct: 203 RDVRGVRSQMRRHCLAAGEAILAHMEHQG 231


>tr|Q1BB65|Q1BB65_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium sp.]
          Length = 222

 Score =  149 bits (375), Expect = 3e-34
 Identities = 85/211 (40%), Positives = 113/211 (53%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+  A  VR  I  G   AG +IR E +A +LG+S TP RE L  L+ EG L  +PR+
Sbjct: 11  QLSEDVARFVRRRIFDGTYPAGGYIRLEQLASELGVSVTPVREALFGLRAEGLLAQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  DI DV + QA +GGEL ARAA  IT + + EL  IQ  LE A    D + 
Sbjct: 71  GFVVLPVTGRDIADVSNVQAYVGGELAARAAHNITDDQLRELTAIQDALEDAYRRDDGEG 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ I   + S K+  ++     YAP   F  +E WP  S   HR ++  L  
Sbjct: 131 AVRLNHEFHRAINVAADSPKLAQMMSLITRYAPESVFPTIERWPAESVRHHRQLLTALAQ 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D   AR AM++H+      L EHL   G +
Sbjct: 191 RDDALARSAMSEHLAAGAEPLIEHLKTRGVV 221


>tr|A3PXA4|A3PXA4_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium sp.]
          Length = 222

 Score =  149 bits (375), Expect = 3e-34
 Identities = 85/211 (40%), Positives = 113/211 (53%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+  A  VR  I  G   AG +IR E +A +LG+S TP RE L  L+ EG L  +PR+
Sbjct: 11  QLSEDVARFVRRRIFDGTYPAGGYIRLEQLASELGVSVTPVREALFGLRAEGLLAQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  DI DV + QA +GGEL ARAA  IT + + EL  IQ  LE A    D + 
Sbjct: 71  GFVVLPVTGRDIADVSNVQAYVGGELAARAAHNITDDQLRELTAIQDALEDAYRRDDGEG 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ I   + S K+  ++     YAP   F  +E WP  S   HR ++  L  
Sbjct: 131 AVRLNHEFHRAINVAADSPKLAQMMSLITRYAPESVFPTIERWPAESVRHHRQLLTALAQ 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D   AR AM++H+      L EHL   G +
Sbjct: 191 RDDALARSAMSEHLAAGAEPLIEHLKTRGVV 221


>tr|A1UDV0|A1UDV0_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, GntR family;[Mycobacterium sp.]
          Length = 222

 Score =  149 bits (375), Expect = 3e-34
 Identities = 85/211 (40%), Positives = 113/211 (53%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LS+  A  VR  I  G   AG +IR E +A +LG+S TP RE L  L+ EG L  +PR+
Sbjct: 11  QLSEDVARFVRRRIFDGTYPAGGYIRLEQLASELGVSVTPVREALFGLRAEGLLAQQPRR 70

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           GF V  ++  DI DV + QA +GGEL ARAA  IT + + EL  IQ  LE A    D + 
Sbjct: 71  GFVVLPVTGRDIADVSNVQAYVGGELAARAAHNITDDQLRELTAIQDALEDAYRRDDGEG 130

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
             RLNH FH+ I   + S K+  ++     YAP   F  +E WP  S   HR ++  L  
Sbjct: 131 AVRLNHEFHRAINVAADSPKLAQMMSLITRYAPESVFPTIERWPAESVRHHRQLLTALAQ 190

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASGTL 226
            D   AR AM++H+      L EHL   G +
Sbjct: 191 RDDALARSAMSEHLAAGAEPLIEHLKTRGVV 221


>tr|C1B5E1|C1B5E1_RHOOB Tax_Id=632772 SubName: Full=Putative GntR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 230

 Score =  148 bits (373), Expect = 6e-34
 Identities = 81/217 (37%), Positives = 126/217 (58%), Gaps = 2/217 (0%)

Query: 8   DRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEG 67
           DR R    +L +  A+HVRE+I+SG++RAG+F+R E +A+ +G+S TP REGLL L++EG
Sbjct: 5   DRSRRQ--QLPEEVASHVREMIISGEVRAGDFLRIERIAEAVGVSTTPVREGLLALRSEG 62

Query: 68  FLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQA 127
           F+ + PR+GF V   + +D++D++ AQA L GEL  RAA  IT + + ELE I    + A
Sbjct: 63  FVEMVPRRGFVVAPFTKQDVQDLFWAQAQLAGELATRAAKNITPQQIAELEAILEAHQDA 122

Query: 128 AAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHR 187
               D + +  L H FH+ I   + S ++  L+ + +   P +F+A +EG    +  +H 
Sbjct: 123 ITQGDTERIASLGHAFHRKINLAADSPRLARLLGSIVANLPNRFYATIEGHLGTTQKEHP 182

Query: 188 AIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
            ++E LR    + A+  M  HI      L E L   G
Sbjct: 183 LLLEALRKHSGKKAKTLMESHILDGADHLIEELDQRG 219


>tr|C5T151|C5T151_ACIDE Tax_Id=573060 SubName: Full=Transcriptional
           regulator, GntR family;[Acidovorax delafieldii 2AN]
          Length = 229

 Score =  145 bits (365), Expect = 5e-33
 Identities = 83/219 (37%), Positives = 127/219 (57%), Gaps = 9/219 (4%)

Query: 2   RPTAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLL 61
           RP    +R++     LS   AA++RE IVSG+LRAGE++R   +A +LG+SATP REGLL
Sbjct: 9   RPAGEGERQQ-----LSAAVAAYLRERIVSGKLRAGEYLRANAIAGELGVSATPVREGLL 63

Query: 62  LLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQ 121
           LL +E  +   PR GF V + + ED+RD++  QA +G EL ARA   ++   + +L+ I 
Sbjct: 64  LLASEALVQRVPRHGFMVGSFTREDLRDIFWTQATIGAELAARAVKYMSDSELVQLQGIN 123

Query: 122 AQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEA 181
            + EQA A +D   + RL H FH++I   + S ++  ++ +     P +F+A++EG    
Sbjct: 124 VRHEQALAERDEVMLARLGHEFHRSINLAARSPRLASVMGSLTKQLPNRFYASIEGHGAG 183

Query: 182 SAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHL 220
           +   H  I + +R GDA+     M +HI       AEHL
Sbjct: 184 AVAYHPLITQAIRVGDAQAVHALMFRHIASG----AEHL 218


>tr|C1AZZ2|C1AZZ2_RHOOB Tax_Id=632772 SubName: Full=Putative GntR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 231

 Score =  143 bits (360), Expect = 2e-32
 Identities = 81/222 (36%), Positives = 116/222 (52%), Gaps = 3/222 (1%)

Query: 3   PTAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLL 62
           P   T R+R    +LSD  A HVR LI+SG +R G+FIR +  A DLG+S TP RE LL 
Sbjct: 10  PAGRTLRRRP---QLSDDVAVHVRNLIMSGGVRPGDFIRLDETAADLGVSVTPVREALLT 66

Query: 63  LQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQA 122
           L+ EG + + P +G+ V  LS +DI D++  Q  +  EL  RA   +T E VEEL  I  
Sbjct: 67  LRGEGLVELVPHRGYVVAPLSRDDIHDLFWLQGQIAEELAVRATRSVTPEAVEELTAINE 126

Query: 123 QLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEAS 182
           +L +A    + D +E L   FH+ I  L+ + K+ W + +   Y P +F+++   W E++
Sbjct: 127 KLRRAVEDGEADRIEDLEFSFHRVINHLADASKLSWFLLSATRYTPVQFYSSDPAWGESA 186

Query: 183 AHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
              HR +I  L  G A+        H       L  HL   G
Sbjct: 187 VESHRRLIAALADGKADVVGAENKAHFIDGAQRLVAHLDEVG 228


>tr|C0ZSM6|C0ZSM6_RHOE4 Tax_Id=234621 SubName: Full=Putative GntR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 230

 Score =  142 bits (358), Expect = 3e-32
 Identities = 79/221 (35%), Positives = 114/221 (51%), Gaps = 4/221 (1%)

Query: 4   TAATDRKRTPPLR----LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREG 59
           T+A  R+ T  LR    LS+  A HVR LI+SG +R GEF+R +  A DLG+S TP RE 
Sbjct: 3   TSARTRRATSELRRRPQLSEDVANHVRNLIMSGAVRPGEFVRLDETAADLGVSVTPVREA 62

Query: 60  LLLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELEN 119
           L+ L+ EG + + P +G+ V+ LS +DI D++  Q  +  +L  RA   ITA+ + EL  
Sbjct: 63  LVALRGEGMVELVPHRGYLVSPLSRQDIEDIFWLQGQIAVKLALRAMDTITADQLVELTE 122

Query: 120 IQAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWP 179
           + A L  A    D   +E+    FH+ I R +G  K+ W +   + Y P + +A   GW 
Sbjct: 123 LNADLRAAVDASDAAAIEQCEFEFHRLINRAAGGAKLAWFLFGAIRYTPARLYATDPGWG 182

Query: 180 EASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHL 220
           E +   H A+IE     D E     M+         L  HL
Sbjct: 183 ELAVSSHDALIEAFEKHDREQVDAQMSLQFSDGAARLLAHL 223


>tr|Q0S3K0|Q0S3K0_RHOSR Tax_Id=101510 SubName: Full=Possible
           transcriptional regulator, GntR family
           protein;[Rhodococcus sp.]
          Length = 231

 Score =  142 bits (357), Expect = 4e-32
 Identities = 82/222 (36%), Positives = 115/222 (51%), Gaps = 3/222 (1%)

Query: 3   PTAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLL 62
           P   T R+R    +LSD  A HVR LI+SG +R G+FIR +  A DLG+S TP RE LL 
Sbjct: 10  PAGRTLRRRP---QLSDDVAVHVRNLIMSGGVRPGDFIRLDETAADLGVSVTPVREALLT 66

Query: 63  LQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQA 122
           L+ EG + + P +G+ V  LS +DI D++  Q  +  EL  RA    T E VEEL  I  
Sbjct: 67  LRGEGLVELVPHRGYVVAPLSRDDIHDLFWLQGQIAEELAVRATRSATPEAVEELTAINE 126

Query: 123 QLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEAS 182
           +L +A    D   +E L   FH+ I RL+ + K+ W + +   Y P +F+++   W E++
Sbjct: 127 KLRRAVEDGDAGRIEDLEFSFHRVINRLADASKLSWFLLSATRYTPVQFYSSDPAWGESA 186

Query: 183 AHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
              HR +I  L  G A+        H       L  HL   G
Sbjct: 187 VDSHRRLIAALADGKADVVGAENKTHFIDGAQRLVAHLDEVG 228


>tr|C5T170|C5T170_ACIDE Tax_Id=573060 SubName: Full=Transcriptional
           regulator, GntR family;[Acidovorax delafieldii 2AN]
          Length = 254

 Score =  141 bits (356), Expect = 5e-32
 Identities = 80/223 (35%), Positives = 131/223 (58%), Gaps = 6/223 (2%)

Query: 2   RPTAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLL 61
           RPT    +++     LS   A+++RE I+SGQL+ G+F+R + ++ +L IS TP REGLL
Sbjct: 8   RPTDGAQQQQ-----LSGTVASYLREKIISGQLKPGDFLRIDAISTELDISTTPVREGLL 62

Query: 62  LLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQ 121
           LLQ+E F+ + PR+GF V + + ED+RD++ AQA++G EL ARA   ++ E +E+L+ + 
Sbjct: 63  LLQSESFVRLLPRRGFVVNSFNKEDLRDIFWAQAIVGAELAARATLRMSEEDLEKLQELD 122

Query: 122 AQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEA 181
           AQ E A    D D ++ L + FH+ I  ++ S ++  L+       P +F+A +EG    
Sbjct: 123 AQHENAFKLGDPDHIQ-LGYEFHRFINLMAKSPRLALLMGNLTKQLPIRFYAEIEGQVAD 181

Query: 182 SAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
           +   H  I++ +R  D +  R  M +HI      L + L  +G
Sbjct: 182 TLKYHPIILDAMRMKDGDAVRSLMFRHIMSGAEKLIDSLERAG 224


>tr|C3JN85|C3JN85_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator MdcY family protein;[Rhodococcus erythropolis
           SK121]
          Length = 230

 Score =  140 bits (352), Expect = 2e-31
 Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 4/221 (1%)

Query: 4   TAATDRKRTPPLR----LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREG 59
           T+A  R+ T  LR    LS+  A HVR LI+SG +R GEF+R +  A DLG+S TP RE 
Sbjct: 3   TSARTRRATSELRRRPQLSEDVANHVRNLIMSGSVRPGEFVRLDETAADLGVSVTPVREA 62

Query: 60  LLLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELEN 119
           L+ L+ EG + + P +G+ V+ LS +DI D++  Q  +  +L  RA   ITA+ + EL  
Sbjct: 63  LVALRGEGMVELVPHRGYLVSPLSRQDIEDIFWLQGQIAVKLALRAMDSITADQLAELTE 122

Query: 120 IQAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWP 179
           + A L  A    D   +E+    FH+ I R +G  K+ W +   + Y P + +A   GW 
Sbjct: 123 LNADLRAAVDASDAAAIEQCEFEFHRLINRAAGGAKLAWFLFGAIRYTPARLYATDPGWG 182

Query: 180 EASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHL 220
           E +   H A+I      D E     M+         L  HL
Sbjct: 183 ELAVSSHDALIAAFEKHDREQVDAQMSLQFSDGAARLLAHL 223


>tr|D5PR98|D5PR98_COREQ Tax_Id=525370 SubName: Full=Transcriptional
           regulator;[Rhodococcus equi ATCC 33707]
          Length = 228

 Score =  137 bits (346), Expect = 8e-31
 Identities = 75/209 (35%), Positives = 108/209 (51%)

Query: 16  RLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTEGFLTIEPRK 75
           +LSD  A HVR +I+SG +R GEFIR +  A +LG+S TP RE LL L+ EG + + P +
Sbjct: 17  QLSDDVAVHVRNVIMSGGVRPGEFIRLDETAAELGVSVTPVREALLTLRGEGLVELVPHR 76

Query: 76  GFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQAAAGKDYDD 135
           G+ V  LS +D+ DV+  Q  +  EL  RA   +  E + EL  I  +L QA    D   
Sbjct: 77  GYVVAPLSRDDVNDVFWLQGRIAEELAGRAVDHVDDEALAELTAINDRLRQAVELGDAVR 136

Query: 136 VERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDHRAIIEKLRS 195
           +E L   FH+ I RL+G+RK+ W +     Y P  F++A   W + +   H  ++  L +
Sbjct: 137 IEELEFAFHRIINRLAGARKLSWFLLGATRYTPVHFYSADREWGDEAVASHARLVAALAA 196

Query: 196 GDAEGAREAMAQHIRRAGTLLAEHLAASG 224
            D  G  +    H       L  HL   G
Sbjct: 197 RDHAGVADETRAHFDDGAKRLVRHLETIG 225


>tr|D5PAM7|D5PAM7_9MYCO Tax_Id=525368 SubName: Full=Transcriptional
           regulator;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 228

 Score =  132 bits (333), Expect = 2e-29
 Identities = 81/224 (36%), Positives = 111/224 (49%), Gaps = 2/224 (0%)

Query: 3   PTAATDRKRTPPLR--LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL 60
           P +A  R R P  R  LSD  A H+R  I+SG LR G FIR +  A +LG+S TP RE L
Sbjct: 4   PISARLRSRRPLRRAQLSDEVAGHLRAAIMSGALRPGTFIRLDETAAELGVSVTPVREAL 63

Query: 61  LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI 120
           L L+ EG + +EP +G  V  L+ +DI D++  QA +  EL A A   IT   ++ELE I
Sbjct: 64  LKLRGEGMVQLEPHRGHVVLPLTRQDIEDIFWLQATIARELAAAATDHITDAQIDELERI 123

Query: 121 QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE 180
              L  A    D + +  +   FH+   + SG  K+ W +     Y P   +AA   W  
Sbjct: 124 NETLAAAVGSGDAETIAGIEFAFHRVFNQASGRIKLAWFLLNAARYMPVLVYAADPQWGA 183

Query: 181 ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
           A+  +HR +I  LR  DA    +        A   L E  A +G
Sbjct: 184 AAVENHRQLIAALRRHDAAAVIDHTVWQFTDAAARLTEMRARTG 227


>tr|Q73TW9|Q73TW9_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 271

 Score =  132 bits (331), Expect = 4e-29
 Identities = 81/226 (35%), Positives = 110/226 (48%), Gaps = 3/226 (1%)

Query: 3   PTAATDRKRTPPLR---LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREG 59
           P +   R R  PLR   LSD  A H+R  I+SG LR G FIR +  A +LG+S TP RE 
Sbjct: 41  PMSMQPRSRRRPLRRAQLSDEVAGHLRAAIMSGALRPGTFIRLDETAAELGVSVTPVREA 100

Query: 60  LLLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELEN 119
           LL L+ EG + +EP +G  V  L+ +DI D++  QA +  EL A A   IT   ++EL+ 
Sbjct: 101 LLKLRGEGMVQLEPHRGHVVLPLTRQDIEDIFWLQATIAKELAAAATDHITDTEIDELDR 160

Query: 120 IQAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWP 179
           I   L  A    D + +  L   FH+   + SG  K+ W +     Y P   +AA   W 
Sbjct: 161 INDALAAAVGSGDAETIAGLEFGFHRVFNQASGRIKLAWFLLNAARYMPVLVYAADPQWG 220

Query: 180 EASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGT 225
            A+  +HR +I  LR  D     E        A   L E    +GT
Sbjct: 221 RAAVDNHRQLIAALRRRDTAAVIEHTVWQFTDAAARLTEMRDRTGT 266


>tr|A0QNQ8|A0QNQ8_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, GntR family protein;[Mycobacterium smegmatis]
          Length = 230

 Score =  127 bits (319), Expect = 1e-27
 Identities = 70/195 (35%), Positives = 101/195 (51%)

Query: 4   TAATDRKRTPPLRLSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLL 63
           T A  R+     +LSD  AAH+R  I++G LR G FIR +  A  LG+S TP RE L  L
Sbjct: 7   TGAQPRRGVRREQLSDEVAAHLRAEIMTGALRPGTFIRLDETAAALGVSITPVREALRTL 66

Query: 64  QTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQ 123
           + EG + +EP +G  V  +S  D+ D++  QA +  EL A     IT   ++ELE +  +
Sbjct: 67  RGEGMVQLEPHRGHVVVPMSRTDVEDIFWLQATIARELAATTVTRITDHQIDELERLNDE 126

Query: 124 LEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASA 183
           LE A    D D++  +   FH+     SG  K+ W +     Y P   ++   GW + + 
Sbjct: 127 LEIAVGRGDPDEISTIEFAFHRAFNHASGRIKLAWFLLHVARYLPALIYSTDPGWGQQAV 186

Query: 184 HDHRAIIEKLRSGDA 198
             HR +IE LR  DA
Sbjct: 187 AGHRLLIEALRRRDA 201


>tr|A0PMT4|A0PMT4_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein (Probably GntR-family);[Mycobacterium
           ulcerans]
          Length = 230

 Score =  126 bits (316), Expect = 2e-27
 Identities = 76/219 (34%), Positives = 110/219 (50%), Gaps = 3/219 (1%)

Query: 9   RKRTPPLR---LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQT 65
           R+   PLR   LSD  A H+R  I+SG LR G FIR +  A +LG+S TP RE LL L+ 
Sbjct: 9   RESRRPLRRAQLSDEVAGHLRAAIMSGTLRPGTFIRLDETAAELGVSITPVREALLKLRG 68

Query: 66  EGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLE 125
           EG + +EP +G  V  L+ +DI D++  QA +  EL   A   I+  ++ ELE+I   L 
Sbjct: 69  EGMVQLEPHRGHVVLPLTRQDIDDIFWLQATIARELAVTATERISEVVIGELEHINDALT 128

Query: 126 QAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHD 185
            A    D + +  L   FH+ + + SG  K+ W +     Y P + +A+   W  A+  +
Sbjct: 129 AAVGAGDTEAIAALEFAFHRVLNQSSGRIKLAWFLLNAARYMPAQLYASDPQWGAAAVDN 188

Query: 186 HRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
           HR +I  LR  D     E        A   L + L  +G
Sbjct: 189 HRQLIAALRRRDTAAVIEHSVWQFTDAAHRLTQMLETNG 227


>tr|A0QMK1|A0QMK1_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, GntR family protein;[Mycobacterium avium]
          Length = 229

 Score =  125 bits (315), Expect = 3e-27
 Identities = 78/219 (35%), Positives = 106/219 (48%), Gaps = 2/219 (0%)

Query: 9   RKRTPPLR--LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQTE 66
           R R P  R  LSD  A H+R  I+SG LR G FIR +  A +LG+S TP RE LL L+ E
Sbjct: 6   RSRRPLRRAQLSDEVAGHLRAAIMSGALRPGTFIRLDETAAELGVSVTPVREALLKLRGE 65

Query: 67  GFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLEQ 126
           G + +EP +G  V  L+ +DI D++  QA +  EL A A   IT   ++EL+ I   L  
Sbjct: 66  GMVQLEPHRGHVVLPLTRQDIEDIFWLQATIAKELAAAATDHITDTEIDELDRINDALAA 125

Query: 127 AAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHDH 186
           A    D + +  L   FH+   + SG  K+ W +     Y P   +AA   W  A+  +H
Sbjct: 126 AVGSGDAETIAGLEFGFHRVFNQASGRIKLAWFLLNAARYMPVLVYAADPQWGRAAVDNH 185

Query: 187 RAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGT 225
           R +I  LR  D     E        A   L      +GT
Sbjct: 186 RQLIAALRRRDTAAVIEHTVWQFTDAAARLTAMRDRTGT 224


>tr|B2HMT6|B2HMT6_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Probably GntR-family);[Mycobacterium
           marinum]
          Length = 230

 Score =  125 bits (314), Expect = 4e-27
 Identities = 77/219 (35%), Positives = 109/219 (49%), Gaps = 3/219 (1%)

Query: 9   RKRTPPLR---LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGLLLLQT 65
           RK   PLR   LSD  A H+R  I+SG LR G FIR +  A +LG+S TP RE LL L+ 
Sbjct: 9   RKSRRPLRRAQLSDEVAGHLRAAIMSGTLRPGTFIRLDETAAELGVSITPVREALLKLRG 68

Query: 66  EGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENIQAQLE 125
           EG + +EP +G  V  L+ +DI D++  QA +  EL   A   I+   + ELE+I   L 
Sbjct: 69  EGMVQLEPHRGHVVLPLTRQDIDDIFWLQATIARELAVTATERISEIDIGELEHINDALT 128

Query: 126 QAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPEASAHD 185
            A    D + +  L   FH+ + + SG  K+ W +     Y P + +A+   W  A+  +
Sbjct: 129 AAVGAGDTEAIAALEFAFHRVLNQSSGRIKLAWFLLNAARYMPAQLYASDPQWGAAAVDN 188

Query: 186 HRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASG 224
           HR +I  LR  D     E        A   L + L  +G
Sbjct: 189 HRQLIAALRRRDTAAVIEHSVWQFTDAAHRLTQMLETNG 227


>tr|Q7U2P3|Q7U2P3_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE
           TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY
           GNTR-FAMILY);[Mycobacterium bovis]
          Length = 271

 Score =  124 bits (311), Expect = 9e-27
 Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 2/227 (0%)

Query: 3   PTAATDRKRTPPLR--LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL 60
           P +A  R + P  R  LSD  A H+R  I+SG LR+G FIR +  A +LG+S TP RE L
Sbjct: 45  PLSAKPRSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTPVREAL 104

Query: 61  LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI 120
           L L+ EG + +EP +G  V  L+ +DI D++  QA +  EL   A   IT   ++EL+ I
Sbjct: 105 LKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSATAHITDVEIDELDRI 164

Query: 121 QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE 180
              L  A    D   +  +   FH+   + S   K+ W +     Y P + FAA   W  
Sbjct: 165 NNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKLAWFLLNAARYMPAQVFAADPRWGA 224

Query: 181 ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTLG 227
            + + HR +I  LR  D     E            L E LA +   G
Sbjct: 225 DAVNSHRQLIAALRRRDTAAVIEHTVWQFTDGARRLTEALAETEVFG 271


>tr|C1AJJ0|C1AJJ0_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 271

 Score =  124 bits (311), Expect = 9e-27
 Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 2/227 (0%)

Query: 3   PTAATDRKRTPPLR--LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL 60
           P +A  R + P  R  LSD  A H+R  I+SG LR+G FIR +  A +LG+S TP RE L
Sbjct: 45  PLSAKPRSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTPVREAL 104

Query: 61  LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI 120
           L L+ EG + +EP +G  V  L+ +DI D++  QA +  EL   A   IT   ++EL+ I
Sbjct: 105 LKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSATAHITDVEIDELDRI 164

Query: 121 QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE 180
              L  A    D   +  +   FH+   + S   K+ W +     Y P + FAA   W  
Sbjct: 165 NNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKLAWFLLNAARYMPAQVFAADPRWGA 224

Query: 181 ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTLG 227
            + + HR +I  LR  D     E            L E LA +   G
Sbjct: 225 DAVNSHRQLIAALRRRDTAAVIEHTVWQFTDGARRLTEALAETEVFG 271


>tr|A1KEY5|A1KEY5_MYCBP Tax_Id=410289 SubName: Full=Possible
           transcriptional regulatory protein (Probably
           gntR-family);[Mycobacterium bovis]
          Length = 271

 Score =  124 bits (311), Expect = 9e-27
 Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 2/227 (0%)

Query: 3   PTAATDRKRTPPLR--LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL 60
           P +A  R + P  R  LSD  A H+R  I+SG LR+G FIR +  A +LG+S TP RE L
Sbjct: 45  PLSAKPRSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTPVREAL 104

Query: 61  LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI 120
           L L+ EG + +EP +G  V  L+ +DI D++  QA +  EL   A   IT   ++EL+ I
Sbjct: 105 LKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSATAHITDVEIDELDRI 164

Query: 121 QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE 180
              L  A    D   +  +   FH+   + S   K+ W +     Y P + FAA   W  
Sbjct: 165 NNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKLAWFLLNAARYMPAQVFAADPRWGA 224

Query: 181 ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTLG 227
            + + HR +I  LR  D     E            L E LA +   G
Sbjct: 225 DAVNSHRQLIAALRRRDTAAVIEHTVWQFTDGARRLTEALAETEVFG 271


>tr|D5YZ16|D5YZ16_MYCTU Tax_Id=515616 SubName: Full=GntR family
           transcriptional regulator;[Mycobacterium tuberculosis
           02_1987]
          Length = 271

 Score =  124 bits (311), Expect = 9e-27
 Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 2/227 (0%)

Query: 3   PTAATDRKRTPPLR--LSDLAAAHVRELIVSGQLRAGEFIRPETVADDLGISATPAREGL 60
           P +A  R + P  R  LSD  A H+R  I+SG LR+G FIR +  A +LG+S TP RE L
Sbjct: 45  PLSAKPRSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTPVREAL 104

Query: 61  LLLQTEGFLTIEPRKGFSVTALSSEDIRDVYDAQALLGGELTARAAGVITAELVEELENI 120
           L L+ EG + +EP +G  V  L+ +DI D++  QA +  EL   A   IT   ++EL+ I
Sbjct: 105 LKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSATAHITDVEIDELDRI 164

Query: 121 QAQLEQAAAGKDYDDVERLNHRFHQTIYRLSGSRKIRWLIKATLPYAPRKFFAAVEGWPE 180
              L  A    D   +  +   FH+   + S   K+ W +     Y P + FAA   W  
Sbjct: 165 NNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKLAWFLLNAARYMPAQVFAADPRWGA 224

Query: 181 ASAHDHRAIIEKLRSGDAEGAREAMAQHIRRAGTLLAEHLAASGTLG 227
            + + HR +I  LR  D     E            L E LA +   G
Sbjct: 225 DAVNSHRQLIAALRRRDTAAVIEHTVWQFTDGARRLTEALAETEVFG 271


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.318    0.133    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,755,062,432
Number of extensions: 67477271
Number of successful extensions: 243887
Number of sequences better than 10.0: 7802
Number of HSP's gapped: 242899
Number of HSP's successfully gapped: 7809
Length of query: 227
Length of database: 4,236,830,644
Length adjustment: 133
Effective length of query: 94
Effective length of database: 2,573,284,732
Effective search space: 241888764808
Effective search space used: 241888764808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)