BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2058 (443 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QU31|A0QU31_MYCS2 Tax_Id=246196 (nuoF)SubName: Full=NADH-qu... 859 0.0 tr|Q1BBP8|Q1BBP8_MYCSS Tax_Id=164756 SubName: Full=NADH-quinone ... 769 0.0 tr|A3PWR6|A3PWR6_MYCSJ Tax_Id=164757 SubName: Full=NADH-quinone ... 769 0.0 tr|A1UD99|A1UD99_MYCSK Tax_Id=189918 SubName: Full=NADH-quinone ... 769 0.0 tr|A1T6A1|A1T6A1_MYCVP Tax_Id=350058 SubName: Full=NADH-quinone ... 761 0.0 tr|A4TDB0|A4TDB0_MYCGI Tax_Id=350054 SubName: Full=NADH-quinone ... 755 0.0 tr|B2HGE3|B2HGE3_MYCMM Tax_Id=216594 (nuoF)SubName: Full=NADH de... 719 0.0 tr|D5PDN7|D5PDN7_9MYCO Tax_Id=525368 (nuoF)SubName: Full=NADH-qu... 719 0.0 tr|A0PR43|A0PR43_MYCUA Tax_Id=362242 (nuoF)SubName: Full=NADH de... 717 0.0 tr|Q0S445|Q0S445_RHOSR Tax_Id=101510 SubName: Full=Probable NADH... 715 0.0 tr|C1AYM8|C1AYM8_RHOOB Tax_Id=632772 (nuoF)SubName: Full=NADH-qu... 710 0.0 tr|Q73V10|Q73V10_MYCPA Tax_Id=1770 (nuoF)SubName: Full=NuoF;[Myc... 705 0.0 tr|A0QJV2|A0QJV2_MYCA1 Tax_Id=243243 (nuoF)SubName: Full=NADH-qu... 705 0.0 sp|P65567|NUOF_MYCTU Tax_Id=1773 (nuoF)RecName: Full=NADH-quinon... 702 0.0 sp|P65568|NUOF_MYCBO Tax_Id=1765 (nuoF)RecName: Full=NADH-quinon... 702 0.0 tr|C6DX88|C6DX88_MYCTK Tax_Id=478434 SubName: Full=NADH dehydrog... 702 0.0 tr|C1AGR7|C1AGR7_MYCBT Tax_Id=561275 (nuoF)SubName: Full=Putativ... 702 0.0 tr|A5WS57|A5WS57_MYCTF Tax_Id=336982 SubName: Full=NADH dehydrog... 702 0.0 tr|A5U7G6|A5U7G6_MYCTA Tax_Id=419947 (nuoF)SubName: Full=NADH de... 702 0.0 tr|A1KNE6|A1KNE6_MYCBP Tax_Id=410289 (nuoF)SubName: Full=Probabl... 702 0.0 tr|D6G2E9|D6G2E9_MYCTU Tax_Id=478435 SubName: Full=NADH dehydrog... 702 0.0 tr|D6FQQ9|D6FQQ9_MYCTU Tax_Id=611304 SubName: Full=NADH dehydrog... 702 0.0 tr|D6FL48|D6FL48_MYCTU Tax_Id=611303 SubName: Full=NADH dehydrog... 702 0.0 tr|D6F9D2|D6F9D2_MYCTU Tax_Id=611302 SubName: Full=NADH oxidored... 702 0.0 tr|D5ZL13|D5ZL13_MYCTU Tax_Id=537210 SubName: Full=NADH dehydrog... 702 0.0 tr|D5Z7Z0|D5Z7Z0_MYCTU Tax_Id=537209 SubName: Full=NADH dehydrog... 702 0.0 tr|D5YW93|D5YW93_MYCTU Tax_Id=515616 SubName: Full=NADH dehydrog... 702 0.0 tr|D5YJB4|D5YJB4_MYCTU Tax_Id=520140 SubName: Full=NADH dehydrog... 702 0.0 tr|D5Y872|D5Y872_MYCTU Tax_Id=520141 SubName: Full=NADH dehydrog... 702 0.0 tr|A4KL48|A4KL48_MYCTU Tax_Id=395095 SubName: Full=NADH dehydrog... 702 0.0 tr|A2VNV5|A2VNV5_MYCTU Tax_Id=348776 SubName: Full=NADH dehydrog... 702 0.0 tr|Q5YWD2|Q5YWD2_NOCFA Tax_Id=37329 (nuoF)SubName: Full=Putative... 696 0.0 tr|C3JKF4|C3JKF4_RHOER Tax_Id=596309 (nuoF)SubName: Full=NADH ox... 690 0.0 tr|C0ZYJ5|C0ZYJ5_RHOE4 Tax_Id=234621 (nuoF)SubName: Full=NADH-qu... 687 0.0 tr|D5PMU2|D5PMU2_COREQ Tax_Id=525370 (nuoF)SubName: Full=NADH-qu... 686 0.0 tr|D1XCC5|D1XCC5_9ACTO Tax_Id=647653 SubName: Full=NADH-quinone ... 669 0.0 tr|B5GWF2|B5GWF2_STRCL Tax_Id=443255 SubName: Full=NADH-quinone ... 667 0.0 tr|D6B690|D6B690_9ACTO Tax_Id=457425 SubName: Full=NADH dehydrog... 665 0.0 tr|D6AEU8|D6AEU8_STRFL Tax_Id=457431 SubName: Full=NADH dehydrog... 665 0.0 tr|C9N6C3|C9N6C3_9ACTO Tax_Id=591167 SubName: Full=NADH-quinone ... 665 0.0 tr|B1W514|B1W514_STRGG Tax_Id=455632 (nuoF1)SubName: Full=Putati... 664 0.0 tr|D1X6K7|D1X6K7_9ACTO Tax_Id=649189 SubName: Full=NADH-quinone ... 664 0.0 tr|B5HDM7|B5HDM7_STRPR Tax_Id=457429 SubName: Full=NADH-quinone ... 654 0.0 tr|B5HQD0|B5HQD0_9ACTO Tax_Id=463191 SubName: Full=NADH-quinone ... 654 0.0 tr|D0LDB1|D0LDB1_GORB4 Tax_Id=526226 SubName: Full=NADH-quinone ... 653 0.0 >tr|A0QU31|A0QU31_MYCS2 Tax_Id=246196 (nuoF)SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Mycobacterium smegmatis] Length = 443 Score = 859 bits (2219), Expect = 0.0 Identities = 418/443 (94%), Positives = 418/443 (94%) Query: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF Sbjct: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 Query: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXX 120 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEG Sbjct: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGAIIA 120 Query: 121 XXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYI 180 VRGEVLPVLRRLQ GYLGTDIMGSGFDLDLIVHAGAGAYI Sbjct: 121 AYAIRARHAFIYVRGEVLPVLRRLQAAVAEAYAAGYLGTDIMGSGFDLDLIVHAGAGAYI 180 Query: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM Sbjct: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 Query: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL Sbjct: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 Query: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG Sbjct: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 Query: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA Sbjct: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 Query: 421 HLDGGCPFDPHASTLMATEGAGV 443 HLDGGCPFDPHASTLMATEGAGV Sbjct: 421 HLDGGCPFDPHASTLMATEGAGV 443 >tr|Q1BBP8|Q1BBP8_MYCSS Tax_Id=164756 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Mycobacterium sp.] Length = 438 Score = 770 bits (1987), Expect = 0.0 Identities = 376/443 (84%), Positives = 392/443 (88%), Gaps = 5/443 (1%) Query: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 MT LTPVLSRFWDEPE WTLETYRRH GY+ L++AL PDDVI +KDSGLRGRGGAGF Sbjct: 1 MTALTPVLSRFWDEPESWTLETYRRHGGYRALEQALGTAPDDVITTIKDSGLRGRGGAGF 60 Query: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXX 120 PTGTKWSFIPQ GD+ GPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEG Sbjct: 61 PTGTKWSFIPQ--GDE---GPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGAIIA 115 Query: 121 XXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYI 180 VRGEV+PVLRRLQ GYLGTDI GSGFDLDLIVHAGAGAYI Sbjct: 116 AYAIRAHHAFIYVRGEVVPVLRRLQAAVAEAYEAGYLGTDIRGSGFDLDLIVHAGAGAYI 175 Query: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPI++ G+DWFRSM Sbjct: 176 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPILLGGIDWFRSM 235 Query: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGH+LKFWTPGGSSTPLL Sbjct: 236 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHELKFWTPGGSSTPLL 295 Query: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 T EHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG Sbjct: 296 TGEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 355 Query: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 TYWLAQIYARLE+G TEAD+DKLLDISD I GKSFCALGDGAASPI+SSIK+FRDEY+A Sbjct: 356 TYWLAQIYARLESGEATEADVDKLLDISDTILGKSFCALGDGAASPIISSIKYFRDEYLA 415 Query: 421 HLDGGCPFDPHASTLMATEGAGV 443 HL GCPFDPHASTLMA + GV Sbjct: 416 HLGNGCPFDPHASTLMAGQEVGV 438 >tr|A3PWR6|A3PWR6_MYCSJ Tax_Id=164757 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Mycobacterium sp.] Length = 438 Score = 770 bits (1987), Expect = 0.0 Identities = 376/443 (84%), Positives = 393/443 (88%), Gaps = 5/443 (1%) Query: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 MT LTPVLSRFWDEPE WTLETYRRH GY+ L++AL+ PDDVI +KDSGLRGRGGAGF Sbjct: 1 MTALTPVLSRFWDEPESWTLETYRRHGGYRALEQALATAPDDVITTIKDSGLRGRGGAGF 60 Query: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXX 120 PTGTKWSFIPQ GD+ GPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEG Sbjct: 61 PTGTKWSFIPQ--GDE---GPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGAIIA 115 Query: 121 XXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYI 180 VRGEV+PVLRRLQ GYLGTDI GSGFDLDLIVHAGAGAYI Sbjct: 116 AYAIRAHHAFIYVRGEVVPVLRRLQAAVAEAYDAGYLGTDIRGSGFDLDLIVHAGAGAYI 175 Query: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPI++ G+DWFRSM Sbjct: 176 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPILLGGIDWFRSM 235 Query: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGH+LKFWTPGGSSTPLL Sbjct: 236 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHELKFWTPGGSSTPLL 295 Query: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 T EHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG Sbjct: 296 TGEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 355 Query: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 TYWLAQIYARLE+G TEAD+DKLLDISD I GKSFCALGDGAASPI+SSIK+FRDEY+A Sbjct: 356 TYWLAQIYARLESGDATEADVDKLLDISDTILGKSFCALGDGAASPIISSIKYFRDEYLA 415 Query: 421 HLDGGCPFDPHASTLMATEGAGV 443 HL GCPFDPHASTLMA + GV Sbjct: 416 HLGNGCPFDPHASTLMAGQEVGV 438 >tr|A1UD99|A1UD99_MYCSK Tax_Id=189918 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Mycobacterium sp.] Length = 438 Score = 770 bits (1987), Expect = 0.0 Identities = 376/443 (84%), Positives = 392/443 (88%), Gaps = 5/443 (1%) Query: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 MT LTPVLSRFWDEPE WTLETYRRH GY+ L++AL PDDVI +KDSGLRGRGGAGF Sbjct: 1 MTALTPVLSRFWDEPESWTLETYRRHGGYRALEQALGTAPDDVITTIKDSGLRGRGGAGF 60 Query: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXX 120 PTGTKWSFIPQ GD+ GPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEG Sbjct: 61 PTGTKWSFIPQ--GDE---GPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGAIIA 115 Query: 121 XXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYI 180 VRGEV+PVLRRLQ GYLGTDI GSGFDLDLIVHAGAGAYI Sbjct: 116 AYAIRAHHAFIYVRGEVVPVLRRLQAAVAEAYEAGYLGTDIRGSGFDLDLIVHAGAGAYI 175 Query: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPI++ G+DWFRSM Sbjct: 176 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPILLGGIDWFRSM 235 Query: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGH+LKFWTPGGSSTPLL Sbjct: 236 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHELKFWTPGGSSTPLL 295 Query: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 T EHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG Sbjct: 296 TGEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 355 Query: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 TYWLAQIYARLE+G TEAD+DKLLDISD I GKSFCALGDGAASPI+SSIK+FRDEY+A Sbjct: 356 TYWLAQIYARLESGEATEADVDKLLDISDTILGKSFCALGDGAASPIISSIKYFRDEYLA 415 Query: 421 HLDGGCPFDPHASTLMATEGAGV 443 HL GCPFDPHASTLMA + GV Sbjct: 416 HLGNGCPFDPHASTLMAGQEVGV 438 >tr|A1T6A1|A1T6A1_MYCVP Tax_Id=350058 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Mycobacterium vanbaalenii] Length = 441 Score = 761 bits (1966), Expect = 0.0 Identities = 374/445 (84%), Positives = 392/445 (88%), Gaps = 8/445 (1%) Query: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 MT LTPVLSRFWDEP+PW+L+TYRRH GYQ L RAL+M PD VI VKDSGLRGRGGAGF Sbjct: 1 MTALTPVLSRFWDEPQPWSLDTYRRHGGYQALDRALAMTPDQVITTVKDSGLRGRGGAGF 60 Query: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXX 120 PTGTKWSFIPQ GD+ GPAAKPHYLVINADESEPGTCKDIPL+LTTPHFLVEG Sbjct: 61 PTGTKWSFIPQ--GDE---GPAAKPHYLVINADESEPGTCKDIPLMLTTPHFLVEGAIIA 115 Query: 121 XXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYI 180 +RGEV+PVLRRLQ G+LG+DI GSGFDL+LIVHAGAGAYI Sbjct: 116 AYAIRAHHAFIYLRGEVVPVLRRLQAAVAEAYAAGHLGSDIHGSGFDLELIVHAGAGAYI 175 Query: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPP+++NGVDWFRSM Sbjct: 176 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPVLLNGVDWFRSM 235 Query: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 GSEKSPGFTLYSLSGHVT PGQYEAPLGITLRELLEYAGGVRAGH+LKFWTPGGSSTPLL Sbjct: 236 GSEKSPGFTLYSLSGHVTTPGQYEAPLGITLRELLEYAGGVRAGHELKFWTPGGSSTPLL 295 Query: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 TAEHLDVPLDYEGMA VGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG Sbjct: 296 TAEHLDVPLDYEGMAGVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 355 Query: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 TYWLAQIY RLE GAGTEAD+DKLLDISDNIFGKSFCALGDGAASPIMSS+KHFR EY A Sbjct: 356 TYWLAQIYERLETGAGTEADLDKLLDISDNIFGKSFCALGDGAASPIMSSLKHFRAEYEA 415 Query: 421 HLD---GGCPFDPHASTLMATEGAG 442 HLD GCPFDP+AS L A EG G Sbjct: 416 HLDPVGKGCPFDPYASMLAAPEGVG 440 >tr|A4TDB0|A4TDB0_MYCGI Tax_Id=350054 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Mycobacterium gilvum] Length = 438 Score = 755 bits (1949), Expect = 0.0 Identities = 367/443 (82%), Positives = 386/443 (87%), Gaps = 5/443 (1%) Query: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 MT LTPVLSRFWDEP+PWT++TY RH GYQ L+RAL+M PDDVI VKDSGLRGRGGAGF Sbjct: 1 MTSLTPVLSRFWDEPQPWTMDTYIRHGGYQALERALAMSPDDVIGTVKDSGLRGRGGAGF 60 Query: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXX 120 PTGTKWSFIPQ G AAKPHYLVINADESEPGTCKDIPL+LTTPHFLVEG Sbjct: 61 PTGTKWSFIPQG-----GEGAAAKPHYLVINADESEPGTCKDIPLMLTTPHFLVEGAIIA 115 Query: 121 XXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYI 180 +RGEV+PVLRRLQ G+LG DI GSGFDL+L VHAGAGAYI Sbjct: 116 AYAIRANHAFIYLRGEVVPVLRRLQAAVAEAYAAGHLGHDIHGSGFDLELTVHAGAGAYI 175 Query: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPI++NGVDWFRSM Sbjct: 176 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPILLNGVDWFRSM 235 Query: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 GSEKSPGFTLYSLSGHVT PGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTPLL Sbjct: 236 GSEKSPGFTLYSLSGHVTTPGQYEAPLGITLRELLDYAGGVRAGHELKFWTPGGSSTPLL 295 Query: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 TA+HLDVPLDYEGMA VGSMLGTKALQIFD+TTCVVRAVRRWTQFYAHESCGKCTPCREG Sbjct: 296 TADHLDVPLDYEGMAGVGSMLGTKALQIFDDTTCVVRAVRRWTQFYAHESCGKCTPCREG 355 Query: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 TYWLAQIY RLE G GTEAD+DKLLDISDNIFGKSFCALGDGAASPIMSS+KHFRDEY A Sbjct: 356 TYWLAQIYERLETGRGTEADLDKLLDISDNIFGKSFCALGDGAASPIMSSLKHFRDEYEA 415 Query: 421 HLDGGCPFDPHASTLMATEGAGV 443 HL CPFDP+AS L A EG GV Sbjct: 416 HLGNACPFDPYASMLAAPEGVGV 438 >tr|B2HGE3|B2HGE3_MYCMM Tax_Id=216594 (nuoF)SubName: Full=NADH dehydrogenase I (Chain F) NuoF (NADH-ubiquinone oxidoreductase chain F);[Mycobacterium marinum] Length = 448 Score = 719 bits (1857), Expect = 0.0 Identities = 348/437 (79%), Positives = 377/437 (86%), Gaps = 6/437 (1%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFP 61 TPLTPV+SR+WD+PE WTL TYRRHDGY+ L++AL+MGPD VI VKDSGLRGRGGAGF Sbjct: 6 TPLTPVISRYWDDPESWTLATYRRHDGYRALEKALAMGPDAVIGTVKDSGLRGRGGAGFS 65 Query: 62 TGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXX 121 TGTKWSFIPQ GD GPAAKPHYLV+NADESEPGTCKDIPL+L TPH LVEG Sbjct: 66 TGTKWSFIPQ--GD---AGPAAKPHYLVVNADESEPGTCKDIPLMLATPHVLVEGVIIAA 120 Query: 122 XXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYIC 181 VRGEVLPVLRRLQ G LG +I GSGFDL+L+VHAGAGAYIC Sbjct: 121 YAIRASHAFIYVRGEVLPVLRRLQNAVAEAYAAGLLGRNINGSGFDLELVVHAGAGAYIC 180 Query: 182 GEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMG 241 GEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++NGVDWFRSMG Sbjct: 181 GEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILNGVDWFRSMG 240 Query: 242 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLT 301 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGG+RAGHQLKFWTPGGSSTPLLT Sbjct: 241 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGIRAGHQLKFWTPGGSSTPLLT 300 Query: 302 AEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGT 361 EHLDVPLDYEG+ VGSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCREGT Sbjct: 301 DEHLDVPLDYEGVGGVGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGT 360 Query: 362 YWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAH 421 +WL +IYARLE G GT DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHF+DEY+AH Sbjct: 361 FWLDKIYARLETGKGTREDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFQDEYIAH 420 Query: 422 LD-GGCPFDPHASTLMA 437 ++ GGCPFDP S L A Sbjct: 421 VEQGGCPFDPRDSMLTA 437 >tr|D5PDN7|D5PDN7_9MYCO Tax_Id=525368 (nuoF)SubName: Full=NADH-quinone oxidoreductase subunit F; EC=1.6.99.5;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 440 Score = 719 bits (1856), Expect = 0.0 Identities = 351/435 (80%), Positives = 373/435 (85%), Gaps = 6/435 (1%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFP 61 TPLTPV+SRFWD+PE WTLETYRRHDGYQ L++AL+M PDDVIA VKDSGLRGRGGAGF Sbjct: 7 TPLTPVISRFWDDPESWTLETYRRHDGYQALKKALAMAPDDVIATVKDSGLRGRGGAGFS 66 Query: 62 TGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXX 121 TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH LVEG Sbjct: 67 TGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLVEGVIIAA 121 Query: 122 XXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYIC 181 VRGEVLPVLRRLQ GYLG DI GSGFDL+L+VHAGAGAYIC Sbjct: 122 YAIRASHAFIYVRGEVLPVLRRLQNAVAEAYAAGYLGRDINGSGFDLELVVHAGAGAYIC 181 Query: 182 GEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMG 241 GEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++NGVDWFRSMG Sbjct: 182 GEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILNGVDWFRSMG 241 Query: 242 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLT 301 SEKSPGFTLYSLSGHV RPGQYEAPLGITLRELL YAGGVRAGH+LKFWTPGGSSTPLLT Sbjct: 242 SEKSPGFTLYSLSGHVARPGQYEAPLGITLRELLAYAGGVRAGHRLKFWTPGGSSTPLLT 301 Query: 302 AEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGT 361 EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAV+RWT FY HESCGKCTPCREGT Sbjct: 302 DEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVQRWTYFYKHESCGKCTPCREGT 361 Query: 362 YWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAH 421 +WL QIY RLE G GT DIDKLLDISD I GKSFCALGDGAASP+MSSIK+FRDEYVAH Sbjct: 362 FWLDQIYERLETGKGTNEDIDKLLDISDTILGKSFCALGDGAASPVMSSIKYFRDEYVAH 421 Query: 422 L-DGGCPFDPHASTL 435 + DGGCPFDP S L Sbjct: 422 VEDGGCPFDPRDSML 436 >tr|A0PR43|A0PR43_MYCUA Tax_Id=362242 (nuoF)SubName: Full=NADH dehydrogenase I (Chain F) NuoF (NADH-ubiquinone oxidoreductase chain F);[Mycobacterium ulcerans] Length = 448 Score = 717 bits (1850), Expect = 0.0 Identities = 347/437 (79%), Positives = 376/437 (86%), Gaps = 6/437 (1%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFP 61 TPLTPV+SR+WD+PE WTL TYRRHDGY+ L++AL+MGPD VI VKDSGLRGRGGAGF Sbjct: 6 TPLTPVISRYWDDPESWTLATYRRHDGYRALEKALAMGPDAVIGTVKDSGLRGRGGAGFS 65 Query: 62 TGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXX 121 TGTKWSFIPQ GD GPAAKPHYLV+NADESEPGTCKDIPL+L TPH LVEG Sbjct: 66 TGTKWSFIPQ--GD---AGPAAKPHYLVVNADESEPGTCKDIPLMLATPHVLVEGVIIAA 120 Query: 122 XXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYIC 181 VRGEVLPVLRRLQ G LG +I GSGFDL+L+VHAGAGAYIC Sbjct: 121 YAIRASHAFIYVRGEVLPVLRRLQNAVAEAYAAGLLGRNINGSGFDLELVVHAGAGAYIC 180 Query: 182 GEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMG 241 GEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++NGVDWFRSMG Sbjct: 181 GEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILNGVDWFRSMG 240 Query: 242 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLT 301 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGG+RAGHQLKFWTPGGSSTPLLT Sbjct: 241 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGIRAGHQLKFWTPGGSSTPLLT 300 Query: 302 AEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGT 361 EHLDVPLDYEG+ VGSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCREGT Sbjct: 301 DEHLDVPLDYEGVGGVGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGT 360 Query: 362 YWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAH 421 +WL +IYARLE G GT DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHF++EY+AH Sbjct: 361 FWLDKIYARLETGKGTREDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFQNEYIAH 420 Query: 422 LD-GGCPFDPHASTLMA 437 + GGCPFDP S L A Sbjct: 421 AEQGGCPFDPRDSMLTA 437 >tr|Q0S445|Q0S445_RHOSR Tax_Id=101510 SubName: Full=Probable NADH dehydrogenase subunit F;[Rhodococcus sp.] Length = 432 Score = 715 bits (1846), Expect = 0.0 Identities = 346/436 (79%), Positives = 378/436 (86%), Gaps = 10/436 (2%) Query: 3 PLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPT 62 PLTPVLSR+WDEPE WTL+TYRRHDGY+GLQ+AL M PD+VI+ VK++GLRGRGGAGFPT Sbjct: 2 PLTPVLSRYWDEPESWTLDTYRRHDGYEGLQKALRMDPDEVISTVKEAGLRGRGGAGFPT 61 Query: 63 GTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXX 122 G KWSFIPQ GD AKPHYLV+NADESEPGTCKD+PL+L TPH LVEG Sbjct: 62 GMKWSFIPQ--GD-------AKPHYLVVNADESEPGTCKDMPLMLATPHALVEGVIIAAY 112 Query: 123 XXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICG 182 VRGEV+PVLRRLQ GYLGT+I+ SGFDL+L+VHAGAGAYICG Sbjct: 113 AIRAGHAFIYVRGEVVPVLRRLQAAVAEAYAAGYLGTNILDSGFDLELVVHAGAGAYICG 172 Query: 183 EETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGS 242 EETALLDSLEGRRGQPRLRPPFPAVAGLYA PTVVNNVESIASVPPI+VNG++WFRSMGS Sbjct: 173 EETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPPIIVNGIEWFRSMGS 232 Query: 243 EKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTA 302 EKSPGFTLYSLSGHVT+PGQYEAPLGITLRELLEYAGGVRAGH+LKFWTPGGSSTP+ T Sbjct: 233 EKSPGFTLYSLSGHVTKPGQYEAPLGITLRELLEYAGGVRAGHRLKFWTPGGSSTPIFTD 292 Query: 303 EHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTY 362 EHLDV LDYEG+ + GSMLGTKALQIFDETTCVVRAV RWT+FYAHESCGKCTPCREGTY Sbjct: 293 EHLDVALDYEGVGAAGSMLGTKALQIFDETTCVVRAVLRWTEFYAHESCGKCTPCREGTY 352 Query: 363 WLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHL 422 WL QI RLE G GT+AD++KLLDI+DNI GKSFCALGDGAASPIMSSIK+FRDEY+AH Sbjct: 353 WLVQILERLERGEGTDADLEKLLDIADNILGKSFCALGDGAASPIMSSIKYFRDEYLAHF 412 Query: 423 D-GGCPFDPHASTLMA 437 + GGCPFDPH STLMA Sbjct: 413 EQGGCPFDPHQSTLMA 428 >tr|C1AYM8|C1AYM8_RHOOB Tax_Id=632772 (nuoF)SubName: Full=NADH-quinone oxidoreductase chain F; EC=1.6.99.5;[Rhodococcus opacus] Length = 432 Score = 710 bits (1833), Expect = 0.0 Identities = 344/436 (78%), Positives = 374/436 (85%), Gaps = 10/436 (2%) Query: 3 PLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPT 62 PLTPVLSR+WDEPE WTL+TYRRHDGY+GLQ+AL M PD+VI+ VK++GLRGRGGAGFPT Sbjct: 2 PLTPVLSRYWDEPESWTLDTYRRHDGYEGLQKALRMEPDEVISTVKEAGLRGRGGAGFPT 61 Query: 63 GTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXX 122 G KWSFIPQ GD KPHYLV+NADESEPGTCKD+PLLL TPH LVEG Sbjct: 62 GMKWSFIPQ--GDD-------KPHYLVVNADESEPGTCKDMPLLLATPHALVEGVIIAAY 112 Query: 123 XXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICG 182 VRGEV+PVLRRLQ GYLG DI+G+GFDL+L+VHAGAGAYICG Sbjct: 113 AIRAGHAFIYVRGEVVPVLRRLQAAVAEAYAAGYLGKDILGTGFDLELVVHAGAGAYICG 172 Query: 183 EETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGS 242 EETALLDSLEGRRGQPRLRPPFPAVAGLYA PTVVNNVESIASVPPI+VNG++WFRSMGS Sbjct: 173 EETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPPIIVNGIEWFRSMGS 232 Query: 243 EKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTA 302 EKSPGFTLYSLSGHVT PGQYEAPLGITLRELL YAGGVRAGH+LKFWTPGGSSTP+ T Sbjct: 233 EKSPGFTLYSLSGHVTTPGQYEAPLGITLRELLGYAGGVRAGHRLKFWTPGGSSTPIFTD 292 Query: 303 EHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTY 362 EHLDV LDYEG+ + GSMLGTKALQIFDETTCVVRAV RWT+FYAHESCGKCTPCREGTY Sbjct: 293 EHLDVALDYEGVGAAGSMLGTKALQIFDETTCVVRAVLRWTEFYAHESCGKCTPCREGTY 352 Query: 363 WLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHL 422 WL QI RLE G GT+AD+ KLLDI+DNI GKSFCALGDGAASPIMSS+K+FRDEY+AH Sbjct: 353 WLVQILERLERGEGTDADLQKLLDIADNILGKSFCALGDGAASPIMSSVKYFRDEYLAHF 412 Query: 423 D-GGCPFDPHASTLMA 437 + GGCPFDPH STLMA Sbjct: 413 EQGGCPFDPHQSTLMA 428 >tr|Q73V10|Q73V10_MYCPA Tax_Id=1770 (nuoF)SubName: Full=NuoF;[Mycobacterium paratuberculosis] Length = 453 Score = 705 bits (1819), Expect = 0.0 Identities = 344/435 (79%), Positives = 368/435 (84%), Gaps = 6/435 (1%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFP 61 TPLTPV+SRFWD+PE WTL+TY RH GY +++AL+M PD VI VKDSGLRGRGGAGF Sbjct: 17 TPLTPVISRFWDDPESWTLQTYHRHGGYTAMKKALAMEPDAVIGMVKDSGLRGRGGAGFS 76 Query: 62 TGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXX 121 TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 77 TGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAA 131 Query: 122 XXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYIC 181 VRGEVLPVLRRLQ GYLG DI GSGFDL+L+VHAGAGAYIC Sbjct: 132 YAIRANHAFIYVRGEVLPVLRRLQNAVAEAYAAGYLGRDIDGSGFDLELVVHAGAGAYIC 191 Query: 182 GEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMG 241 GEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I+ NGVDWFRSMG Sbjct: 192 GEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIIGNGVDWFRSMG 251 Query: 242 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLT 301 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTPLLT Sbjct: 252 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTPLLT 311 Query: 302 AEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGT 361 EHLDVPLDYEG+ VGSMLGTKAL+IFDETTCVVRAVRRWT FY HESCGKCTPCREGT Sbjct: 312 DEHLDVPLDYEGVGGVGSMLGTKALEIFDETTCVVRAVRRWTYFYKHESCGKCTPCREGT 371 Query: 362 YWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAH 421 +WL QIY RLE G GT DIDKLLDISD I GKSFCALGDGAASP+MSSIK+FRDEYVAH Sbjct: 372 FWLDQIYERLETGKGTAEDIDKLLDISDTILGKSFCALGDGAASPVMSSIKYFRDEYVAH 431 Query: 422 LDGG-CPFDPHASTL 435 ++ G CPFDP S L Sbjct: 432 VENGRCPFDPRDSML 446 >tr|A0QJV2|A0QJV2_MYCA1 Tax_Id=243243 (nuoF)SubName: Full=NADH-quinone oxidoreductase, F subunit;[Mycobacterium avium] Length = 453 Score = 705 bits (1819), Expect = 0.0 Identities = 344/435 (79%), Positives = 368/435 (84%), Gaps = 6/435 (1%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFP 61 TPLTPV+SRFWD+PE WTL+TY RH GY +++AL+M PD VI VKDSGLRGRGGAGF Sbjct: 17 TPLTPVISRFWDDPESWTLQTYHRHGGYAAMKKALAMEPDAVIGMVKDSGLRGRGGAGFS 76 Query: 62 TGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXX 121 TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 77 TGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAA 131 Query: 122 XXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYIC 181 VRGEVLPVLRRLQ GYLG DI GSGFDL+L+VHAGAGAYIC Sbjct: 132 YAIRANHAFIYVRGEVLPVLRRLQNAVAEAYAAGYLGRDIDGSGFDLELVVHAGAGAYIC 191 Query: 182 GEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMG 241 GEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I+ NGVDWFRSMG Sbjct: 192 GEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIIGNGVDWFRSMG 251 Query: 242 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLT 301 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTPLLT Sbjct: 252 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTPLLT 311 Query: 302 AEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGT 361 EHLDVPLDYEG+ VGSMLGTKAL+IFDETTCVVRAVRRWT FY HESCGKCTPCREGT Sbjct: 312 DEHLDVPLDYEGVGGVGSMLGTKALEIFDETTCVVRAVRRWTYFYKHESCGKCTPCREGT 371 Query: 362 YWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAH 421 +WL QIY RLE G GT DIDKLLDISD I GKSFCALGDGAASP+MSSIK+FRDEYVAH Sbjct: 372 FWLDQIYERLETGKGTAEDIDKLLDISDTILGKSFCALGDGAASPVMSSIKYFRDEYVAH 431 Query: 422 LDGG-CPFDPHASTL 435 ++ G CPFDP S L Sbjct: 432 VENGRCPFDPRDSML 446 >sp|P65567|NUOF_MYCTU Tax_Id=1773 (nuoF)RecName: Full=NADH-quinone oxidoreductase subunit F; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1 subunit F;[Mycobacterium tuberculosis] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >sp|P65568|NUOF_MYCBO Tax_Id=1765 (nuoF)RecName: Full=NADH-quinone oxidoreductase subunit F; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit F; AltName: Full=NDH-1 subunit F;[Mycobacterium bovis] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|C6DX88|C6DX88_MYCTK Tax_Id=478434 SubName: Full=NADH dehydrogenase subunit I F nuoF;[Mycobacterium tuberculosis] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|C1AGR7|C1AGR7_MYCBT Tax_Id=561275 (nuoF)SubName: Full=Putative NADH dehydrogenase I chain F; EC=1.6.5.3;[Mycobacterium bovis] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|A5WS57|A5WS57_MYCTF Tax_Id=336982 SubName: Full=NADH dehydrogenase I chain F nuoF (NADH-ubiquinone oxidoreductase chain F);[Mycobacterium tuberculosis] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|A5U7G6|A5U7G6_MYCTA Tax_Id=419947 (nuoF)SubName: Full=NADH dehydrogenase subunit F;[Mycobacterium tuberculosis] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|A1KNE6|A1KNE6_MYCBP Tax_Id=410289 (nuoF)SubName: Full=Probable NADH dehydrogenase I (Chain F) nuoF; EC=1.6.5.3;[Mycobacterium bovis] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D6G2E9|D6G2E9_MYCTU Tax_Id=478435 SubName: Full=NADH dehydrogenase subunit I F nuoF;[Mycobacterium tuberculosis KZN 605] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D6FQQ9|D6FQQ9_MYCTU Tax_Id=611304 SubName: Full=NADH dehydrogenase subunit I F nuoF;[Mycobacterium tuberculosis K85] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D6FL48|D6FL48_MYCTU Tax_Id=611303 SubName: Full=NADH dehydrogenase subunit I F nuoF;[Mycobacterium tuberculosis CPHL_A] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D6F9D2|D6F9D2_MYCTU Tax_Id=611302 SubName: Full=NADH oxidoreductase (Quinone), F subunit;[Mycobacterium tuberculosis T46] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D5ZL13|D5ZL13_MYCTU Tax_Id=537210 SubName: Full=NADH dehydrogenase subunit I F nuoF;[Mycobacterium tuberculosis T17] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D5Z7Z0|D5Z7Z0_MYCTU Tax_Id=537209 SubName: Full=NADH dehydrogenase I (Chain F) nuoF (NADH-ubiquinone oxidoreductase chain F);[Mycobacterium tuberculosis GM 1503] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D5YW93|D5YW93_MYCTU Tax_Id=515616 SubName: Full=NADH dehydrogenase subunit I F nuoF;[Mycobacterium tuberculosis 02_1987] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D5YJB4|D5YJB4_MYCTU Tax_Id=520140 SubName: Full=NADH dehydrogenase subunit I;[Mycobacterium tuberculosis EAS054] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|D5Y872|D5Y872_MYCTU Tax_Id=520141 SubName: Full=NADH dehydrogenase subunit I;[Mycobacterium tuberculosis T85] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|A4KL48|A4KL48_MYCTU Tax_Id=395095 SubName: Full=NADH dehydrogenase I (Chain F) nuoF (NADH-ubiquinone oxidoreductase chain F);[Mycobacterium tuberculosis str. Haarlem] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|A2VNV5|A2VNV5_MYCTU Tax_Id=348776 SubName: Full=NADH dehydrogenase I (Chain F) nuoF (NADH-ubiquinone oxidoreductase chain F);[Mycobacterium tuberculosis C] Length = 445 Score = 702 bits (1812), Expect = 0.0 Identities = 341/440 (77%), Positives = 375/440 (85%), Gaps = 9/440 (2%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHD---GYQGLQRALSMGPDDVIAFVKDSGLRGRGGA 58 TPLTPV+SR WD+PE WTL TY+RHD GYQ LQ+AL+M PDDVI+ VKDSGLRGRGGA Sbjct: 6 TPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGA 65 Query: 59 GFPTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXX 118 GF TGTKWSFIPQ GD G AAKPHYLV+NADESEPGTCKDIPL+L TPH L+EG Sbjct: 66 GFATGTKWSFIPQ--GDT---GAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVI 120 Query: 119 XXXXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGA 178 VRGEV+PVLRRL G+LG +I GSGFDL+L+VHAGAGA Sbjct: 121 IAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGA 180 Query: 179 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFR 238 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLY CPTV+NNVE+IASVP I++ G+DWFR Sbjct: 181 YICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFR 240 Query: 239 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTP 298 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELL+YAGGVRAGH+LKFWTPGGSSTP Sbjct: 241 SMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTP 300 Query: 299 LLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCR 358 LLT EHLDVPLDYEG+ + GSMLGTKAL+IFDETTCVVRAVRRWT+FY HESCGKCTPCR Sbjct: 301 LLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCR 360 Query: 359 EGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEY 418 EGT+WL +IY RLE G G+ DIDKLLDISD+I GKSFCALGDGAASP+MSSIKHFRDEY Sbjct: 361 EGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEY 420 Query: 419 VAHLD-GGCPFDPHASTLMA 437 +AH++ GGCPFDP S L+A Sbjct: 421 LAHVEGGGCPFDPRDSMLVA 440 >tr|Q5YWD2|Q5YWD2_NOCFA Tax_Id=37329 (nuoF)SubName: Full=Putative NADH dehydrogenase I chain F;[Nocardia farcinica] Length = 441 Score = 696 bits (1796), Expect = 0.0 Identities = 339/444 (76%), Positives = 371/444 (83%), Gaps = 5/444 (1%) Query: 1 MTPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGF 60 MT L PVL+R+WD+P+ WTL+TYRRHDGY+GL+ AL M PD VI VKD+GLRGRGGAGF Sbjct: 1 MTALAPVLTRYWDDPQSWTLDTYRRHDGYEGLRIALGMEPDQVIQTVKDAGLRGRGGAGF 60 Query: 61 PTGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXX 120 PTG KW FIPQ G P G KPHYLV+NADESEPGTCKDIPLL+ TPH LVEG Sbjct: 61 PTGMKWGFIPQ--GPGPDG--TVKPHYLVVNADESEPGTCKDIPLLMATPHALVEGAIIA 116 Query: 121 XXXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYI 180 +RGEV+PVLRRL+ G LG DI+GSGFDL+LIVHAGAGAYI Sbjct: 117 SYAIRANTAFIYLRGEVVPVLRRLRAAVDQAYAAGLLGRDILGSGFDLELIVHAGAGAYI 176 Query: 181 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSM 240 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPI+ G DWFRSM Sbjct: 177 CGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPILRYGTDWFRSM 236 Query: 241 GSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLL 300 GSEKSPGFT+YSLSGHVTRPGQYEAPLGITLRELL+YA GVRAGH+LKFWTPGGSSTPL Sbjct: 237 GSEKSPGFTIYSLSGHVTRPGQYEAPLGITLRELLDYADGVRAGHRLKFWTPGGSSTPLF 296 Query: 301 TAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREG 360 T EHLDVPLDYEG+A+ GSMLGTKALQIFDETTCVVRAV RWT+FYAHESCGKCTPCREG Sbjct: 297 TDEHLDVPLDYEGVAAAGSMLGTKALQIFDETTCVVRAVLRWTEFYAHESCGKCTPCREG 356 Query: 361 TYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVA 420 TYWL Q+ R+E G GTEAD+D LLDI+D+I GKSFCALGDGAASPI+SS+K+FRDEY+A Sbjct: 357 TYWLVQLLRRIETGGGTEADLDTLLDITDSINGKSFCALGDGAASPIVSSVKYFRDEYLA 416 Query: 421 HLDG-GCPFDPHASTLMATEGAGV 443 H+ G GCPFDP ST A G GV Sbjct: 417 HMRGDGCPFDPARSTAWAEAGEGV 440 >tr|C3JKF4|C3JKF4_RHOER Tax_Id=596309 (nuoF)SubName: Full=NADH oxidoreductase, f subunit; EC=1.6.99.5;[Rhodococcus erythropolis SK121] Length = 439 Score = 690 bits (1781), Expect = 0.0 Identities = 331/433 (76%), Positives = 361/433 (83%), Gaps = 4/433 (0%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLSR+WD+P WTL++Y RHDGYQ L++AL+M PD VI VKD+GLRGRGGAGFPTG Sbjct: 3 LAPVLSRYWDQPNSWTLDSYLRHDGYQALRKALAMSPDAVIETVKDAGLRGRGGAGFPTG 62 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KWSFIPQ D+P G KPHYLV+NADESEPGTCKD+PL++ TPH LVEG Sbjct: 63 LKWSFIPQSTEDKPGDG---KPHYLVVNADESEPGTCKDMPLMMATPHTLVEGVIIAAYA 119 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 VRGEV+PVLRRLQ GYLG I+GSGFDLDL+VHAGAGAYICGE Sbjct: 120 IRAAKAFIYVRGEVVPVLRRLQTAVAEAYAAGYLGRSILGSGFDLDLVVHAGAGAYICGE 179 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I++ G +WFRSMGSE Sbjct: 180 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPSIVLGGPEWFRSMGSE 239 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHVT PGQYEAPLGITLRELL+YAGGVR GH LKFWTPGGSSTP+ T E Sbjct: 240 KSPGFTLYSLSGHVTTPGQYEAPLGITLRELLDYAGGVRTGHTLKFWTPGGSSTPIFTDE 299 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQIFD+TTC+VRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 300 HLDVPLDYEGVGAAGSMLGTKALQIFDDTTCIVRAVLRWTEFYAHESCGKCTPCREGTYW 359 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L QI RLE G GTEAD+ KLLDISD I GKSFCALGDGA SPIMSS+K+FR+EYVAH D Sbjct: 360 LVQILRRLEGGTGTEADLTKLLDISDTILGKSFCALGDGATSPIMSSLKYFREEYVAHFD 419 Query: 424 G-GCPFDPHASTL 435 G GCPFDP S L Sbjct: 420 GNGCPFDPRRSVL 432 >tr|C0ZYJ5|C0ZYJ5_RHOE4 Tax_Id=234621 (nuoF)SubName: Full=NADH-quinone oxidoreductase chain F; EC=1.6.99.5;[Rhodococcus erythropolis] Length = 439 Score = 687 bits (1773), Expect = 0.0 Identities = 331/433 (76%), Positives = 361/433 (83%), Gaps = 4/433 (0%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLSR+WD+P WTL++Y R DGYQ L++AL+ PD VI VKD+GLRGRGGAGFPTG Sbjct: 3 LAPVLSRYWDQPNSWTLDSYLRRDGYQALRKALATPPDAVIETVKDAGLRGRGGAGFPTG 62 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KWSFIPQ D+P G KPHYLV+NADESEPGTCKD+PL++ TPH LVEG Sbjct: 63 LKWSFIPQVSEDKPGDG---KPHYLVVNADESEPGTCKDMPLMMATPHTLVEGVIIAAYA 119 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 VRGEV+PVLRRLQ GYLG +++GSGFDLDL+VHAGAGAYICGE Sbjct: 120 IRAAKAFIYVRGEVVPVLRRLQTAVAEAYAAGYLGRNVLGSGFDLDLVVHAGAGAYICGE 179 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I++ G +WFRSMGSE Sbjct: 180 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPSIVLGGPEWFRSMGSE 239 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHVT PGQYEA LGITLRELLEYAGGVRAGH LKFWTPGGSSTP+ T E Sbjct: 240 KSPGFTLYSLSGHVTTPGQYEAELGITLRELLEYAGGVRAGHTLKFWTPGGSSTPIFTDE 299 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQIFDETTC+VRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 300 HLDVPLDYEGVGAAGSMLGTKALQIFDETTCIVRAVLRWTEFYAHESCGKCTPCREGTYW 359 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L QI RLE G GTEAD+ KLLDISD I GKSFCALGDGA SPIMSS+K+FR+EYVAH D Sbjct: 360 LVQILRRLEGGTGTEADLTKLLDISDTILGKSFCALGDGATSPIMSSLKYFREEYVAHFD 419 Query: 424 G-GCPFDPHASTL 435 G GCPFDPH S L Sbjct: 420 GNGCPFDPHRSVL 432 >tr|D5PMU2|D5PMU2_COREQ Tax_Id=525370 (nuoF)SubName: Full=NADH-quinone oxidoreductase subunit F; EC=1.6.99.5;[Rhodococcus equi ATCC 33707] Length = 688 Score = 686 bits (1770), Expect = 0.0 Identities = 333/442 (75%), Positives = 362/442 (81%), Gaps = 5/442 (1%) Query: 2 TPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFP 61 TPLTPVLS WDE WTL+ Y HDGY L++AL M PD+VI VKD+GLRGRGGAGFP Sbjct: 245 TPLTPVLSSHWDEDRSWTLDAYHGHDGYTALRKALRMNPDEVIQTVKDAGLRGRGGAGFP 304 Query: 62 TGTKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXX 121 TG KWSFIPQ+ PA AKPHYLV+NADESEPGTCKDIPL+ TPH L+EG Sbjct: 305 TGMKWSFIPQD----PATDGTAKPHYLVVNADESEPGTCKDIPLMFATPHTLIEGVVIAA 360 Query: 122 XXXXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYIC 181 VRGEV+PVLRRLQ GYLG DI+GSG+DLD++VHAGAGAYIC Sbjct: 361 YAIRAAQAFVYVRGEVVPVLRRLQAAVAEAYDAGYLGRDILGSGYDLDIVVHAGAGAYIC 420 Query: 182 GEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMG 241 GEETALLDSLEGRRGQPRLRPPFPAVAGLYA PTVVNNVESIASVPPI++ G +WFR MG Sbjct: 421 GEETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPPIILRGPEWFRGMG 480 Query: 242 SEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLT 301 SE SPGFTLYSLSGHVTRPGQYEAPLGITLR+LL+ AGGVRAGH+LKFWTPGGSSTPLLT Sbjct: 481 SEASPGFTLYSLSGHVTRPGQYEAPLGITLRQLLDVAGGVRAGHRLKFWTPGGSSTPLLT 540 Query: 302 AEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGT 361 EHLDVPLDYEG+A GSMLGTKALQIFDETTC+VR V RWTQFYAHESCGKCTPCREGT Sbjct: 541 DEHLDVPLDYEGVAGAGSMLGTKALQIFDETTCIVRVVLRWTQFYAHESCGKCTPCREGT 600 Query: 362 YWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAH 421 YWL QI RLE G G+ D++KLLD+SD I GKSFCALGDGAASPIMSS+K+FRDEYVAH Sbjct: 601 YWLVQILERLERGEGSVEDLEKLLDVSDTILGKSFCALGDGAASPIMSSLKYFRDEYVAH 660 Query: 422 LDG-GCPFDPHASTLMATEGAG 442 G GCPFDP AS L+AT G Sbjct: 661 AGGRGCPFDPDASALVATVPTG 682 >tr|D1XCC5|D1XCC5_9ACTO Tax_Id=647653 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Streptomyces sp. ACTE] Length = 457 Score = 669 bits (1726), Expect = 0.0 Identities = 323/437 (73%), Positives = 357/437 (81%), Gaps = 10/437 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L+PVLS FWDEPEPWTLETYRRHDGY+GL++AL+M PDD+IA+VKDSGLRGRGGAGFPTG Sbjct: 18 LSPVLSAFWDEPEPWTLETYRRHDGYEGLRKALAMSPDDLIAYVKDSGLRGRGGAGFPTG 77 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 78 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYA 128 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLG +I+GSG DL+L VHAGAGAYICGE Sbjct: 129 IRSSHAFIYLRGEVVPVLRRLHEAVREAYEAGYLGANILGSGLDLELTVHAGAGAYICGE 188 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWF+SMGSE Sbjct: 189 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNRGKDWFKSMGSE 248 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHV PGQYEAPLGITLR+LL+ +GG+RAGH+LKFWTPGGSSTP+ T E Sbjct: 249 KSPGFTLYSLSGHVAGPGQYEAPLGITLRQLLDMSGGMRAGHRLKFWTPGGSSTPMFTDE 308 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 309 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 368 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E G G AD+DKL DI+DNI GKSFCALGDGAASPI SS+K+FR+EY H+ Sbjct: 369 LVQLLRDIEAGKGEMADLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEQHVT 428 Query: 424 G-GCPFDPHASTLMATE 439 G GCPFDP STL A + Sbjct: 429 GKGCPFDPARSTLWADD 445 >tr|B5GWF2|B5GWF2_STRCL Tax_Id=443255 SubName: Full=NADH-quinone oxidoreductase subunit F;[Streptomyces clavuligerus ATCC 27064] Length = 456 Score = 667 bits (1722), Expect = 0.0 Identities = 325/435 (74%), Positives = 354/435 (81%), Gaps = 10/435 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 LTPVLS FWDE E WTLETYRRHDGYQGL++AL+M PDD+IA VKDSGLRGRGGAGFPTG Sbjct: 23 LTPVLSAFWDEEESWTLETYRRHDGYQGLRKALAMAPDDLIAHVKDSGLRGRGGAGFPTG 82 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 83 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGMIIACWA 133 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLG +I+GSG DLD+ VHAGAGAYICGE Sbjct: 134 IRSNHAFIYLRGEVVPVLRRLHEAVREAYEAGYLGRNILGSGLDLDITVHAGAGAYICGE 193 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWFRSMGS+ Sbjct: 194 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILHRGKDWFRSMGSD 253 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KS GFTLYSLSGHV PGQYEAPLGITLR+LL+ +GG+R GH+LKFWTPGGSSTPLLT E Sbjct: 254 KSAGFTLYSLSGHVASPGQYEAPLGITLRQLLDMSGGMRPGHRLKFWTPGGSSTPLLTEE 313 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+A+ GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 314 HLDVPLDYEGVAAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 373 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E+G G AD+DKL DI+DNI GKSFCALGDGAASPI SS+++FR EY AHLD Sbjct: 374 LVQLLRDIEDGKGAPADLDKLADIADNINGKSFCALGDGAASPIFSSLRYFRAEYEAHLD 433 Query: 424 G-GCPFDPHASTLMA 437 G GCPFDP ST A Sbjct: 434 GAGCPFDPAKSTAWA 448 >tr|D6B690|D6B690_9ACTO Tax_Id=457425 SubName: Full=NADH dehydrogenase subunit I F;[Streptomyces albus J1074] Length = 449 Score = 665 bits (1715), Expect = 0.0 Identities = 320/437 (73%), Positives = 354/437 (81%), Gaps = 10/437 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLS FWD+PE WTLETYRRHDGY+GL++AL+M PDD+IA+VKD+GLRGRGGAGFPTG Sbjct: 16 LAPVLSAFWDQPESWTLETYRRHDGYEGLRKALAMSPDDLIAYVKDAGLRGRGGAGFPTG 75 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 76 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYA 126 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLG D++GSG DLDL VHAGAGAYICGE Sbjct: 127 IRSSHAFIYLRGEVVPVLRRLHEAVREAYEAGYLGKDVLGSGLDLDLTVHAGAGAYICGE 186 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G +WFRSMGSE Sbjct: 187 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILQQGKEWFRSMGSE 246 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHV PGQYEAPLGITLR+LL+ +GG+R GH+LKFWTPGGSSTP+ T E Sbjct: 247 KSPGFTLYSLSGHVAGPGQYEAPLGITLRQLLDMSGGMRPGHRLKFWTPGGSSTPMFTDE 306 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 307 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 366 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E G G +D+DKL DI+DNI GKSFCALGDGAASPI SS+K+FRDEY H+ Sbjct: 367 LVQLLRDIEAGQGKMSDLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFRDEYEQHIT 426 Query: 424 G-GCPFDPHASTLMATE 439 G GCPFDP STL A + Sbjct: 427 GKGCPFDPAKSTLWADQ 443 >tr|D6AEU8|D6AEU8_STRFL Tax_Id=457431 SubName: Full=NADH dehydrogenase I chain F;[Streptomyces roseosporus NRRL 15998] Length = 459 Score = 665 bits (1715), Expect = 0.0 Identities = 320/437 (73%), Positives = 356/437 (81%), Gaps = 10/437 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLS FWD+PE WTL+TYRRH+GY+GL++AL+M PDD+IA+VKDSGLRGRGGAGFPTG Sbjct: 18 LAPVLSSFWDQPESWTLDTYRRHEGYEGLRKALAMAPDDLIAYVKDSGLRGRGGAGFPTG 77 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 78 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYA 128 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLGT+I+GSG DL+L VHAGAGAYICGE Sbjct: 129 IRSSHAFIYLRGEVVPVLRRLHEAVREAYEAGYLGTNILGSGLDLELTVHAGAGAYICGE 188 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWF+SMGSE Sbjct: 189 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFKSMGSE 248 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHVT PGQYEAPLGITLR+LL+ +GG+RAGH+LKFWTPGGSSTP+ T E Sbjct: 249 KSPGFTLYSLSGHVTSPGQYEAPLGITLRQLLDMSGGMRAGHRLKFWTPGGSSTPMFTEE 308 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 309 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 368 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E G G AD+DKL DI+DNI GKSFCALGDGAASPI SS+K+FR+EY H+ Sbjct: 369 LVQLLRDIEAGKGEMADLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEQHIT 428 Query: 424 G-GCPFDPHASTLMATE 439 G GCPFDP ST A + Sbjct: 429 GKGCPFDPARSTAWADD 445 >tr|C9N6C3|C9N6C3_9ACTO Tax_Id=591167 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Streptomyces flavogriseus ATCC 33331] Length = 457 Score = 665 bits (1715), Expect = 0.0 Identities = 320/437 (73%), Positives = 355/437 (81%), Gaps = 10/437 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLS FWDEPE WTL+TY RHDGY+GL++AL+M PDD+IA+VKDSGLRGRGGAGFPTG Sbjct: 18 LAPVLSAFWDEPESWTLDTYHRHDGYEGLRKALAMEPDDLIAYVKDSGLRGRGGAGFPTG 77 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 78 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYA 128 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLGT+++GSG DL+L VHAGAGAYICGE Sbjct: 129 IRSSHAFIYLRGEVVPVLRRLHEAVREAYEAGYLGTNVLGSGLDLELTVHAGAGAYICGE 188 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWF+SMGSE Sbjct: 189 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFKSMGSE 248 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHVT PGQYEAPLGITLR+LL+ +GG+R GH+LKFWTPGGSSTP+ T E Sbjct: 249 KSPGFTLYSLSGHVTSPGQYEAPLGITLRQLLDMSGGIREGHRLKFWTPGGSSTPMFTDE 308 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 309 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 368 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E G G AD+DKL DI+DNI GKSFCALGDGAASPI SS+K+FR+EY H+ Sbjct: 369 LVQLLRDIEAGKGQMADLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEQHIT 428 Query: 424 G-GCPFDPHASTLMATE 439 G GCPFDP STL A + Sbjct: 429 GKGCPFDPARSTLWADD 445 >tr|B1W514|B1W514_STRGG Tax_Id=455632 (nuoF1)SubName: Full=Putative NADH dehydrogenase chain F;[Streptomyces griseus subsp. griseus] Length = 460 Score = 664 bits (1712), Expect = 0.0 Identities = 319/437 (72%), Positives = 356/437 (81%), Gaps = 10/437 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLS FWD+P+ WTL+TYRRH+GY+GL++AL+M PDD+IA+VKDSGLRGRGGAGFPTG Sbjct: 19 LAPVLSAFWDQPDSWTLDTYRRHEGYEGLRKALAMAPDDLIAYVKDSGLRGRGGAGFPTG 78 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 79 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYA 129 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLGT+I+GSG DL+L VHAGAGAYICGE Sbjct: 130 IRSSHAFIYLRGEVVPVLRRLHEAVREAYEAGYLGTNILGSGLDLELTVHAGAGAYICGE 189 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWF+SMGSE Sbjct: 190 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFKSMGSE 249 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHVT PGQYEAPLGITLR+LL+ +GG+RAGH+LKFWTPGGSSTP+ T E Sbjct: 250 KSPGFTLYSLSGHVTSPGQYEAPLGITLRQLLDMSGGMRAGHRLKFWTPGGSSTPMFTEE 309 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 310 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 369 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E G G AD+DKL DI+DNI GKSFCALGDGAASPI SS+K+FR+EY H+ Sbjct: 370 LVQLLRDIEAGKGEMADLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEQHIT 429 Query: 424 G-GCPFDPHASTLMATE 439 G GCPFDP ST A + Sbjct: 430 GKGCPFDPARSTAWADD 446 >tr|D1X6K7|D1X6K7_9ACTO Tax_Id=649189 SubName: Full=NADH-quinone oxidoreductase, F subunit; EC=1.6.99.5;[Streptomyces sp. ACT-1] Length = 459 Score = 664 bits (1712), Expect = 0.0 Identities = 319/437 (72%), Positives = 356/437 (81%), Gaps = 10/437 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLS FWD+P+ WTL+TYRRH+GY+GL++AL+M PDD+IA+VKDSGLRGRGGAGFPTG Sbjct: 18 LAPVLSAFWDQPDSWTLDTYRRHEGYEGLRKALAMAPDDLIAYVKDSGLRGRGGAGFPTG 77 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 78 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYA 128 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLGT+I+GSG DL+L VHAGAGAYICGE Sbjct: 129 IRSSHAFIYLRGEVVPVLRRLHEAVREAYEAGYLGTNILGSGLDLELTVHAGAGAYICGE 188 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWF+SMGSE Sbjct: 189 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFKSMGSE 248 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHVT PGQYEAPLGITLR+LL+ +GG+RAGH+LKFWTPGGSSTP+ T E Sbjct: 249 KSPGFTLYSLSGHVTSPGQYEAPLGITLRQLLDMSGGMRAGHRLKFWTPGGSSTPMFTEE 308 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 309 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 368 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E G G AD+DKL DI+DNI GKSFCALGDGAASPI SS+K+FR+EY H+ Sbjct: 369 LVQLLRDIEAGKGEMADLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEQHIT 428 Query: 424 G-GCPFDPHASTLMATE 439 G GCPFDP ST A + Sbjct: 429 GKGCPFDPARSTAWADD 445 >tr|B5HDM7|B5HDM7_STRPR Tax_Id=457429 SubName: Full=NADH-quinone oxidoreductase subunit F;[Streptomyces pristinaespiralis ATCC 25486] Length = 456 Score = 654 bits (1688), Expect = 0.0 Identities = 315/435 (72%), Positives = 351/435 (80%), Gaps = 10/435 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L+PVLS FWD+P WTL TYRRHDGY+GL++AL+M PDD+IA+VKD+GLRGRGGAGFPTG Sbjct: 23 LSPVLSAFWDDPRSWTLATYRRHDGYEGLRKALAMSPDDLIAYVKDAGLRGRGGAGFPTG 82 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 83 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYA 133 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL G+LG +I+GSG DL+L VHAGAGAYICGE Sbjct: 134 IRSSHAFIYLRGEVVPVLRRLHEAVREAYEAGFLGKNILGSGLDLELTVHAGAGAYICGE 193 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWFRSMGSE Sbjct: 194 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILHKGKDWFRSMGSE 253 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHV PGQYEAPLGITLR+LL+ +GG+R GH+LKFWTPGGSSTP+ T E Sbjct: 254 KSPGFTLYSLSGHVASPGQYEAPLGITLRQLLDMSGGMRPGHRLKFWTPGGSSTPMFTDE 313 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 314 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 373 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHL- 422 L Q+ +E G G +D+DKL DI+DNI GKSFCALGDGAASPI SS+K+FR+EY H+ Sbjct: 374 LVQLLRDIEAGNGVMSDLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEQHIT 433 Query: 423 DGGCPFDPHASTLMA 437 GGCPFDP ST A Sbjct: 434 QGGCPFDPARSTAWA 448 >tr|B5HQD0|B5HQD0_9ACTO Tax_Id=463191 SubName: Full=NADH-quinone oxidoreductase subunit F;[Streptomyces sviceus ATCC 29083] Length = 448 Score = 654 bits (1687), Expect = 0.0 Identities = 315/435 (72%), Positives = 350/435 (80%), Gaps = 10/435 (2%) Query: 4 LTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTG 63 L PVLS FWDE + WTL+ Y+RH+GY+GL++AL+M PDD+IA+VKDSGLRGRGGAGFPTG Sbjct: 16 LAPVLSAFWDEDKSWTLDVYQRHEGYEGLRKALAMSPDDLIAYVKDSGLRGRGGAGFPTG 75 Query: 64 TKWSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXX 123 KW FIPQ G KPHYLV+NADESEPGTCKDIPLL PH L+EG Sbjct: 76 MKWQFIPQGDG---------KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGMIIACYA 126 Query: 124 XXXXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGE 183 +RGEV+PVLRRL GYLG +I+GSG DLD+ VHAGAGAYICGE Sbjct: 127 IRSSHAFIYLRGEVVPVLRRLHSAVSEAYAAGYLGQNILGSGLDLDITVHAGAGAYICGE 186 Query: 184 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSE 243 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVP I+ G DWFRSMGSE Sbjct: 187 ETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILQRGKDWFRSMGSE 246 Query: 244 KSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAE 303 KSPGFTLYSLSGHV PGQYEAPLGITLR+LLE +GG+R GH+LKFWTPGGSSTP+ T E Sbjct: 247 KSPGFTLYSLSGHVASPGQYEAPLGITLRQLLEMSGGMRPGHRLKFWTPGGSSTPMFTEE 306 Query: 304 HLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYW 363 HLDVPLDYEG+ + GSMLGTKALQ FDETTCVVRAV RWT+FYAHESCGKCTPCREGTYW Sbjct: 307 HLDVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYW 366 Query: 364 LAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLD 423 L Q+ +E G G +D+DKL DI+DNI GKSFCALGDGAASPI SS+K+FR+EY H+ Sbjct: 367 LVQLLRDIEAGKGVMSDLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEQHIT 426 Query: 424 G-GCPFDPHASTLMA 437 G GCPFDP ST A Sbjct: 427 GRGCPFDPAKSTAWA 441 >tr|D0LDB1|D0LDB1_GORB4 Tax_Id=526226 SubName: Full=NADH-quinone oxidoreductase, F subunit;[Gordonia bronchialis] Length = 706 Score = 653 bits (1685), Expect = 0.0 Identities = 317/437 (72%), Positives = 353/437 (80%), Gaps = 9/437 (2%) Query: 6 PVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTGTK 65 PVLSR W EP+ WTL+ Y +H+GYQGL++AL PDD+I +K SGLRGRGGAGFP G K Sbjct: 273 PVLSRHWQEPDSWTLDNYLQHNGYQGLRKALDTPPDDIIELIKASGLRGRGGAGFPVGMK 332 Query: 66 WSFIPQERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGXXXXXXXXX 125 WSFIPQ + P A PHYLV+NADESEPGTCKD+PL+L +PH LVEG Sbjct: 333 WSFIPQ------SDDPDAPPHYLVVNADESEPGTCKDMPLMLASPHSLVEGVIIAAYAIR 386 Query: 126 XXXXXXXVRGEVLPVLRRLQXXXXXXXXXGYLGTDIMGSGFDLDLIVHAGAGAYICGEET 185 VRGEV V+RRL+ GYLG DI+GSGFDL+L+VHAGAGAYICGEET Sbjct: 387 AHHAFIYVRGEVASVIRRLRTAVDDAYAAGYLGRDILGSGFDLELVVHAGAGAYICGEET 446 Query: 186 ALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPPIMVNGVDWFRSMGSEKS 245 ALLDSLEGRRGQPRLRPPFPAVAGLYA PTVVNNVESIASVPPI+ NGVDWFRSMG+EKS Sbjct: 447 ALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPPIIRNGVDWFRSMGTEKS 506 Query: 246 PGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGVRAGHQLKFWTPGGSSTPLLTAEHL 305 PGFTLYSLSGHV RPGQYEA LG+TLRELL+ AGGVRAGHQLKFWTPGGSSTPLLTAEHL Sbjct: 507 PGFTLYSLSGHVERPGQYEAALGVTLRELLDRAGGVRAGHQLKFWTPGGSSTPLLTAEHL 566 Query: 306 DVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESCGKCTPCREGTYWLA 365 DVPLDYEG+ + GSMLGTKALQIFDETTCVV AV RWTQFYAHESCGKCTPCREGTYWL Sbjct: 567 DVPLDYEGVGAAGSMLGTKALQIFDETTCVVGAVLRWTQFYAHESCGKCTPCREGTYWLV 626 Query: 366 QIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAHLDGG 425 Q+ RLE GT AD+D L D++++I GKSFCALGDGA SPI+SS+K+FRDEY AHL G Sbjct: 627 QLLKRLETEGGTTADLDTLADVTNSIVGKSFCALGDGAGSPIVSSLKYFRDEYDAHLASG 686 Query: 426 CPFDPHASTLMATEGAG 442 CPF+ + T G+G Sbjct: 687 CPFE---ARFARTSGSG 700 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.319 0.139 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,947,442,740 Number of extensions: 178281379 Number of successful extensions: 346634 Number of sequences better than 10.0: 2573 Number of HSP's gapped: 340266 Number of HSP's successfully gapped: 2644 Length of query: 443 Length of database: 4,236,830,644 Length adjustment: 141 Effective length of query: 302 Effective length of database: 2,473,221,820 Effective search space: 746912989640 Effective search space used: 746912989640 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 82 (36.2 bits)