BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2225 (245 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QUI9|A0QUI9_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 483 e-135 tr|A1T6K8|A1T6K8_MYCVP Tax_Id=350058 SubName: Full=Transcription... 380 e-103 tr|A0QD32|A0QD32_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 377 e-103 tr|Q73XB5|Q73XB5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 375 e-102 tr|A4TDN9|A4TDN9_MYCGI Tax_Id=350054 SubName: Full=Transcription... 375 e-102 tr|B2HQD4|B2HQD4_MYCMM Tax_Id=216594 SubName: Full=Transcription... 374 e-102 tr|D5PGP7|D5PGP7_9MYCO Tax_Id=525368 SubName: Full=TetR/AcrR fam... 370 e-100 tr|A0PUE2|A0PUE2_MYCUA Tax_Id=362242 SubName: Full=Transcription... 367 e-100 sp|P67435|Y1388_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 343 8e-93 sp|P67434|Y1353_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 343 8e-93 tr|C1AMZ8|C1AMZ8_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 343 8e-93 tr|A5WM37|A5WM37_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 343 8e-93 tr|A5U253|A5U253_MYCTA Tax_Id=419947 SubName: Full=TetR/AcrR fam... 343 8e-93 tr|A1KIE3|A1KIE3_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 343 8e-93 tr|D6FRY1|D6FRY1_MYCTU Tax_Id=611304 SubName: Full=Transcription... 343 8e-93 tr|D6FGJ9|D6FGJ9_MYCTU Tax_Id=611303 SubName: Full=Transcription... 343 8e-93 tr|D6F3W4|D6F3W4_MYCTU Tax_Id=611302 SubName: Full=Transcription... 343 8e-93 tr|D5Z3J5|D5Z3J5_MYCTU Tax_Id=537209 SubName: Full=Transcription... 343 8e-93 tr|D5YQY9|D5YQY9_MYCTU Tax_Id=515616 SubName: Full=Transcription... 343 8e-93 tr|D5Y300|D5Y300_MYCTU Tax_Id=520141 SubName: Full=Transcription... 343 8e-93 tr|A2VHP1|A2VHP1_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 343 8e-93 tr|Q1BB55|Q1BB55_MYCSS Tax_Id=164756 SubName: Full=Transcription... 343 1e-92 tr|A3PXB4|A3PXB4_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 343 1e-92 tr|A1UDW0|A1UDW0_MYCSK Tax_Id=189918 SubName: Full=Transcription... 343 1e-92 tr|D5XSY5|D5XSY5_MYCTU Tax_Id=515617 SubName: Full=Transcription... 341 4e-92 tr|C6DTN2|C6DTN2_MYCTK Tax_Id=478434 SubName: Full=Transcription... 340 7e-92 tr|D6GA53|D6GA53_MYCTU Tax_Id=478435 SubName: Full=Transcription... 340 7e-92 tr|D5ZFB8|D5ZFB8_MYCTU Tax_Id=537210 SubName: Full=Transcription... 230 1e-58 tr|A4KGS2|A4KGS2_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 230 1e-58 tr|A0QUK3|A0QUK3_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 227 1e-57 tr|D5YEK6|D5YEK6_MYCTU Tax_Id=520140 SubName: Full=Transcription... 217 1e-54 tr|B1MMN2|B1MMN2_MYCA9 Tax_Id=561007 SubName: Full=Putative HTH-... 194 6e-48 tr|D0L3A8|D0L3A8_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 165 4e-39 tr|D1VAS0|D1VAS0_9ACTO Tax_Id=298654 SubName: Full=Transcription... 141 6e-32 tr|Q2J9T6|Q2J9T6_FRASC Tax_Id=106370 SubName: Full=Transcription... 98 8e-19 tr|Q0RTL8|Q0RTL8_FRAAA Tax_Id=326424 SubName: Full=Putative TetR... 85 7e-15 tr|D6KEE0|D6KEE0_9ACTO Tax_Id=645465 SubName: Full=Tetracycline ... 79 4e-13 tr|Q0RIZ3|Q0RIZ3_FRAAA Tax_Id=326424 SubName: Full=Putative tran... 79 5e-13 tr|D2AVQ3|D2AVQ3_STRRD Tax_Id=479432 SubName: Full=Putative tran... 79 6e-13 tr|D2AUS1|D2AUS1_STRRD Tax_Id=479432 SubName: Full=Putative tran... 78 8e-13 tr|B4VDX0|B4VDX0_9ACTO Tax_Id=465541 SubName: Full=Transcription... 77 1e-12 tr|D1BUS7|D1BUS7_XYLCX Tax_Id=446471 SubName: Full=Transcription... 77 2e-12 tr|D2PNT5|D2PNT5_KRIFD Tax_Id=479435 SubName: Full=Transcription... 76 4e-12 tr|B4EDH4|B4EDH4_BURCJ Tax_Id=216591 (tetR)SubName: Full=Tetracy... 76 4e-12 tr|A7L849|A7L849_KLEPN Tax_Id=573 (tetR)SubName: Full=TetR;[Kleb... 74 2e-11 >tr|A0QUI9|A0QUI9_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium smegmatis] Length = 245 Score = 483 bits (1243), Expect = e-135 Identities = 245/245 (100%), Positives = 245/245 (100%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL Sbjct: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP Sbjct: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKKTRR 240 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKKTRR Sbjct: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKKTRR 240 Query: 241 KVTAG 245 KVTAG Sbjct: 241 KVTAG 245 >tr|A1T6K8|A1T6K8_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 250 Score = 380 bits (975), Expect = e-103 Identities = 193/247 (78%), Positives = 216/247 (87%), Gaps = 3/247 (1%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MAKQ AEKRQRRERGSINP+DIIKGAFELAE+V IDNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 1 MAKQATAEKRQRRERGSINPDDIIKGAFELAEQVGIDNLSMPLLGKHLGVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRALR++ ATPYVEAKDWRE+LANHAR+MR+ F GNPILCDLILIRSAL Sbjct: 61 KKDDLLNAMTDRALRQYAFATPYVEAKDWRETLANHARSMRQTFNGNPILCDLILIRSAL 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SPRAA++GVQEVE AI LVEAGLS EDAFDTYSA+SVHVRGSVVL RL EKN A ++ Sbjct: 121 SPRAAKLGVQEVERAIGSLVEAGLSPEDAFDTYSAMSVHVRGSVVLQRLREKNLAGEDGH 180 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE--KPAKK- 237 GD ++ M IDPE+ PLLA VT +GH + A+D++NFEYGL+CILDHAARLIE+ KPA+K Sbjct: 181 GDIDDTMTIDPESAPLLAAVTQKGHHLSASDDRNFEYGLECILDHAARLIEQNAKPARKA 240 Query: 238 TRRKVTA 244 T K TA Sbjct: 241 TPAKSTA 247 >tr|A0QD32|A0QD32_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium avium] Length = 262 Score = 377 bits (968), Expect = e-103 Identities = 188/237 (79%), Positives = 207/237 (87%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MAKQ A+KRQRRERGSINP+DII GAFELAE+VSIDNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 1 MAKQATADKRQRRERGSINPDDIITGAFELAEQVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRAL ++V ATPYVEA DWRE+L NHAR MRK FMGNPILCDLILIR+AL Sbjct: 61 KKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRAAL 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SP+AAR+G QE+E A+A LV+AGLS EDAFDTYSA+SVHVRGSVVL RLYEKN+++D P Sbjct: 121 SPKAARLGAQEMEKAVANLVQAGLSPEDAFDTYSAISVHVRGSVVLQRLYEKNQSSDVGP 180 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKK 237 E+A+ IDPE TPLLAQVT GHRIGA DE NFEYGL CILDHA+RLIEE K Sbjct: 181 RAIEDAVAIDPEKTPLLAQVTRIGHRIGAPDETNFEYGLTCILDHASRLIEEGKGAK 237 >tr|Q73XB5|Q73XB5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 268 Score = 375 bits (964), Expect = e-102 Identities = 187/237 (78%), Positives = 207/237 (87%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 +AKQ A+KRQRRERGSINP+DII GAFELAE+VSIDNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 7 VAKQATADKRQRRERGSINPDDIITGAFELAEQVSIDNLSMPLLGKHLGVGVTSIYWYFR 66 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRAL ++V ATPYVEA DWRE+L NHAR MRK FMGNPILCDLILIR+AL Sbjct: 67 KKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRAAL 126 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SP+AAR+G QE+E A+A LV+AGLS EDAFDTYSA+SVHVRGSVVL RLYEKN+++D P Sbjct: 127 SPKAARLGAQEMEKAVANLVQAGLSPEDAFDTYSAISVHVRGSVVLQRLYEKNQSSDVGP 186 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKK 237 E+A+ IDPE TPLLAQVT GHRIGA DE NFEYGL CILDHA+RLIEE K Sbjct: 187 RAIEDAVAIDPEKTPLLAQVTRIGHRIGAPDETNFEYGLTCILDHASRLIEEGKGAK 243 >tr|A4TDN9|A4TDN9_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 244 Score = 375 bits (963), Expect = e-102 Identities = 188/240 (78%), Positives = 211/240 (87%), Gaps = 2/240 (0%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MA+Q AEKRQRRERGSINP+DIIKGAFELAE+V IDNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 1 MARQATAEKRQRRERGSINPDDIIKGAFELAEQVGIDNLSMPLLGKHLGVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRALR++ ATPYVEA+DWRE+LANHARTMRK F GNPILCDLILIRSAL Sbjct: 61 KKDDLLNAMTDRALRQYAFATPYVEARDWRETLANHARTMRKTFNGNPILCDLILIRSAL 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SPRAA+VGVQ+VE AI LVEAGLS EDAFDTYSA+SVHVRGSVVL RL EKN A D+ Sbjct: 121 SPRAAKVGVQQVEKAIGSLVEAGLSPEDAFDTYSAMSVHVRGSVVLQRLREKNLAGDDGH 180 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKKTRR 240 GD ++ M IDPET PLLA VT +GH + A+D++NFE+GL CIL++AARLIE+ AK TR+ Sbjct: 181 GDIDDTMAIDPETAPLLAAVTQKGHHLSASDDRNFEFGLDCILENAARLIEK--AKTTRK 238 >tr|B2HQD4|B2HQD4_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 267 Score = 374 bits (959), Expect = e-102 Identities = 190/260 (73%), Positives = 213/260 (81%), Gaps = 17/260 (6%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 +AK+ AA+KRQRRERGSINP+DII GAFELAE+VSIDNLSMP+LGKHLGVGVTSIYWYFR Sbjct: 6 VAKRAAADKRQRRERGSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFR 65 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRAL ++V ATPYVEA DWRE+L NHAR MRK FMGNPILCDLILIRSAL Sbjct: 66 KKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSAL 125 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SP+AAR+G QE+E AIA LVEAGLS EDAFDTY+AVS+HVRGSVVLHRLYEK ++ D+ P Sbjct: 126 SPKAARLGAQEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGP 185 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEK------- 233 E+AM IDP TTPLLAQV+ +GHRI DE NFEYGL CILDHA RLI+E+ Sbjct: 186 RAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDERAKAAKSA 245 Query: 234 ----------PAKKTRRKVT 243 PA +TR K T Sbjct: 246 PSRPRKAAKPPAPRTRAKAT 265 >tr|D5PGP7|D5PGP7_9MYCO Tax_Id=525368 SubName: Full=TetR/AcrR family transcriptional regulator;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 270 Score = 370 bits (949), Expect = e-100 Identities = 186/237 (78%), Positives = 205/237 (86%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 +AKQ A+KRQRRERGSINP+DII GAFELAE+VSIDNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 6 VAKQATADKRQRRERGSINPDDIISGAFELAEQVSIDNLSMPLLGKHLGVGVTSIYWYFR 65 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRAL ++V ATPYVEA DWRE+L NHAR MRK FMGNPILCDLILIR+AL Sbjct: 66 KKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRAAL 125 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SP+AAR+G +E+E AIA LVEAGLS EDAFDTYSAVSVHVRGSVVL RLYEKN+++D Sbjct: 126 SPKAARLGAEEMEKAIANLVEAGLSPEDAFDTYSAVSVHVRGSVVLQRLYEKNQSSDEGA 185 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKK 237 E+A+ IDPE TPLLAQV+ GHRIGA DE NFEYGL CILDHA+ LIEE K Sbjct: 186 RAIEDAVAIDPEKTPLLAQVSRIGHRIGAPDETNFEYGLGCILDHASWLIEEGKRSK 242 >tr|A0PUE2|A0PUE2_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 267 Score = 367 bits (941), Expect = e-100 Identities = 186/260 (71%), Positives = 210/260 (80%), Gaps = 17/260 (6%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 +AK+ AA+KRQRRERGSINP+DII GAFELAE+VSIDNLSMP+LGKHLGVGVTSIYWYFR Sbjct: 6 VAKRAAADKRQRRERGSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFR 65 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAMTDRAL ++V ATPYVE DWRE+L NHAR MRK FM NPILCDLILIRSAL Sbjct: 66 KKDDLLNAMTDRALSKYVFATPYVEGSDWRETLRNHARLMRKTFMSNPILCDLILIRSAL 125 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 SP+ AR+G Q++E AIA LVEAGLS EDAFDTY+AVS+HVRGSVVLHRLYEK ++ D+ P Sbjct: 126 SPKTARLGAQKMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGP 185 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEK------- 233 E+AM IDP TTPLLAQV+ +GHRI DE NFEYGL CILDHA RLI+E+ Sbjct: 186 RAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDERAKAAKSA 245 Query: 234 ----------PAKKTRRKVT 243 PA +TR K T Sbjct: 246 PSRPRKAAKPPAPRTRAKAT 265 >sp|P67435|Y1388_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized HTH-type transcriptional regulator Mb1388c;[Mycobacterium bovis] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >sp|P67434|Y1353_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv1353c/MT1396;[Mycobacterium tuberculosis] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|C1AMZ8|C1AMZ8_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A5WM37|A5WM37_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A5U253|A5U253_MYCTA Tax_Id=419947 SubName: Full=TetR/AcrR family transcriptional regulator;[Mycobacterium tuberculosis] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A1KIE3|A1KIE3_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulatory protein;[Mycobacterium bovis] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D6FRY1|D6FRY1_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis K85] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D6FGJ9|D6FGJ9_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis CPHL_A] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D6F3W4|D6F3W4_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T46] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D5Z3J5|D5Z3J5_MYCTU Tax_Id=537209 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis GM 1503] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D5YQY9|D5YQY9_MYCTU Tax_Id=515616 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis 02_1987] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D5Y300|D5Y300_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis T85] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A2VHP1|A2VHP1_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 261 Score = 343 bits (881), Expect = 8e-93 Identities = 170/229 (74%), Positives = 191/229 (83%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|Q1BB55|Q1BB55_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 250 Score = 343 bits (880), Expect = 1e-92 Identities = 167/249 (67%), Positives = 206/249 (82%), Gaps = 5/249 (2%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MA+Q AEKRQRRERGSINPEDIIKGAFELAE+VS+DNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 1 MARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAM DRALR+ PYV+A +WRESL NHA MRK F+ +PILCDL+LIR AL Sbjct: 61 KKDDLLNAMADRALRQIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGAL 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 S +A R+G++++E+A++GLV AGLS EDAFDTYSAVSVHVRGSVVL RLYEK R+ +++ Sbjct: 121 STKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSE 180 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE-----KPA 235 +++ IDPE+TPL+A+++++GH +G ++ NFEYGL CILDHAARLIE+ KPA Sbjct: 181 FRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPA 240 Query: 236 KKTRRKVTA 244 R+ ++ Sbjct: 241 AARRKNASS 249 >tr|A3PXB4|A3PXB4_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 250 Score = 343 bits (880), Expect = 1e-92 Identities = 167/249 (67%), Positives = 206/249 (82%), Gaps = 5/249 (2%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MA+Q AEKRQRRERGSINPEDIIKGAFELAE+VS+DNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 1 MARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAM DRALR+ PYV+A +WRESL NHA MRK F+ +PILCDL+LIR AL Sbjct: 61 KKDDLLNAMADRALRQIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGAL 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 S +A R+G++++E+A++GLV AGLS EDAFDTYSAVSVHVRGSVVL RLYEK R+ +++ Sbjct: 121 STKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSE 180 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE-----KPA 235 +++ IDPE+TPL+A+++++GH +G ++ NFEYGL CILDHAARLIE+ KPA Sbjct: 181 FRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPA 240 Query: 236 KKTRRKVTA 244 R+ ++ Sbjct: 241 AARRKNASS 249 >tr|A1UDW0|A1UDW0_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 250 Score = 343 bits (880), Expect = 1e-92 Identities = 167/249 (67%), Positives = 206/249 (82%), Gaps = 5/249 (2%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MA+Q AEKRQRRERGSINPEDIIKGAFELAE+VS+DNLSMPLLGKHLGVGVTSIYWYFR Sbjct: 1 MARQATAEKRQRRERGSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KKDDLLNAM DRALR+ PYV+A +WRESL NHA MRK F+ +PILCDL+LIR AL Sbjct: 61 KKDDLLNAMADRALRQIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGAL 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 S +A R+G++++E+A++GLV AGLS EDAFDTYSAVSVHVRGSVVL RLYEK R+ +++ Sbjct: 121 STKALRLGLEQIEAAVSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSE 180 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE-----KPA 235 +++ IDPE+TPL+A+++++GH +G ++ NFEYGL CILDHAARLIE+ KPA Sbjct: 181 FRLDDSATIDPESTPLMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQQDTTAKPA 240 Query: 236 KKTRRKVTA 244 R+ ++ Sbjct: 241 AARRKNASS 249 >tr|D5XSY5|D5XSY5_MYCTU Tax_Id=515617 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T92] Length = 261 Score = 341 bits (875), Expect = 4e-92 Identities = 169/229 (73%), Positives = 190/229 (82%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHLGVGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHA +MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHASSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|C6DTN2|C6DTN2_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 261 Score = 340 bits (873), Expect = 7e-92 Identities = 169/229 (73%), Positives = 190/229 (82%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHL VGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLRVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D6GA53|D6GA53_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis KZN 605] Length = 261 Score = 340 bits (873), Expect = 7e-92 Identities = 169/229 (73%), Positives = 190/229 (82%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 Q KRQRR+RGSINPEDII GAFELA++VSIDNLSMPLLGKHL VGVTSIYWYFRKKD Sbjct: 2 QTTPGKRQRRQRGSINPEDIISGAFELAQQVSIDNLSMPLLGKHLRVGVTSIYWYFRKKD 61 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPR 123 DLLNAMTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ Sbjct: 62 DLLNAMTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPK 121 Query: 124 AARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDF 183 AR+G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P Sbjct: 122 TARLGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAI 181 Query: 184 EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 E + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 182 EHPVAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|D5ZFB8|D5ZFB8_MYCTU Tax_Id=537210 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T17] Length = 195 Score = 230 bits (586), Expect = 1e-58 Identities = 113/164 (68%), Positives = 131/164 (79%) Query: 69 MTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVG 128 MTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ AR+G Sbjct: 1 MTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLG 60 Query: 129 VQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAMV 188 QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P E + Sbjct: 61 AQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVA 120 Query: 189 IDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 121 IDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 164 >tr|A4KGS2|A4KGS2_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 195 Score = 230 bits (586), Expect = 1e-58 Identities = 113/164 (68%), Positives = 131/164 (79%) Query: 69 MTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVG 128 MTDRAL ++V ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ AR+G Sbjct: 1 MTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLG 60 Query: 129 VQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAMV 188 QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P E + Sbjct: 61 AQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVA 120 Query: 189 IDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 121 IDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 164 >tr|A0QUK3|A0QUK3_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium smegmatis] Length = 246 Score = 227 bits (578), Expect = 1e-57 Identities = 122/229 (53%), Positives = 153/229 (66%), Gaps = 2/229 (0%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 MA R RRERGSI ++I+ GAFE+A +VS+DNLSMP L KHL VGVTSIYWYFR Sbjct: 1 MASPATGGGRPRRERGSITVDEILSGAFEVAREVSVDNLSMPQLAKHLDVGVTSIYWYFR 60 Query: 61 KKDDLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 +KDDLL+AMT+ ALRE+ ++A WRESL HA MR NPILCDLILIR Sbjct: 61 RKDDLLDAMTELALREYDFGVSSIDAGSWRESLRAHAHRMRDTIQQNPILCDLILIRGTG 120 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 AAR ++++E +A LV+AGLS + A TYSA+ V VR S VLHRL +NRA+ Sbjct: 121 GTPAARHALEKIEQPVAALVQAGLSPQQAVQTYSAIQVLVRSSAVLHRL--QNRASTVPL 178 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARL 229 VIDP+T PL++ +T +G+RIGAAD NF++ L IL+ A L Sbjct: 179 PRDHWQQVIDPQTMPLISSLTGDGYRIGAADTANFDHILDSILERAEHL 227 >tr|D5YEK6|D5YEK6_MYCTU Tax_Id=520140 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis EAS054] Length = 203 Score = 217 bits (552), Expect = 1e-54 Identities = 108/166 (65%), Positives = 126/166 (75%) Query: 67 NAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAAR 126 +A + A ATPY+EA DWRE+L NHAR+MRK F NP+LCDLILIR+ALSP+ AR Sbjct: 7 SARFEGAAARSAFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTAR 66 Query: 127 VGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEA 186 +G QE+E AIA LV AGLS+EDAFD YSAVSVHVRGSVVL RL K+++ + P E Sbjct: 67 LGAQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHP 126 Query: 187 MVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 + IDP TTPLLA T GHRIGA DE NFEYGL+CILDHA RLIE+ Sbjct: 127 VAIDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 172 >tr|B1MMN2|B1MMN2_MYCA9 Tax_Id=561007 SubName: Full=Putative HTH-type transcriptional regulator;[Mycobacterium abscessus] Length = 250 Score = 194 bits (494), Expect = 6e-48 Identities = 102/230 (44%), Positives = 146/230 (63%), Gaps = 6/230 (2%) Query: 9 KRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNA 68 KR+RR RGSI EDII GAFELAE++ I LSMPLL KHL VGVTSIYWYFRKK +LL+A Sbjct: 23 KRERRRRGSITAEDIIAGAFELAEEIGISGLSMPLLAKHLDVGVTSIYWYFRKKGELLDA 82 Query: 69 MTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIR-SALSPRAARV 127 MTDRA +++ A P+V + W+++L +H MR+AF P+L +LIL+R S LS A + Sbjct: 83 MTDRATKQYHFAAPFVGDETWQDALRSHTHRMREAFRERPVLVELILMRTSELSSEALQA 142 Query: 128 GVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAM 187 +Q +ES + L+ G S ++A D Y A+S+H+RG VVL + A+ A ++ Sbjct: 143 SIQNLESLVRTLIGVGFSPDNALDVYFALSLHIRGVVVLEHMDTVMPASGEA-----RSL 197 Query: 188 VIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEEKPAKK 237 V P L ++ S GH I + NF++ ++ I++ A L+ + A + Sbjct: 198 VPSATLAPTLHELASRGHSIATISDANFDFTVEAIIERAENLLAQDIAAR 247 >tr|D0L3A8|D0L3A8_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 231 Score = 165 bits (418), Expect = 4e-39 Identities = 87/220 (39%), Positives = 132/220 (60%), Gaps = 7/220 (3%) Query: 12 RRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTD 71 RR RGSI+ E+II GAF++A +VS+ SMP+L KHLGVGVTSIYWYFRKK+DLL+AM D Sbjct: 11 RRARGSISAEEIIAGAFDVAGRVSLSEFSMPMLAKHLGVGVTSIYWYFRKKEDLLDAMAD 70 Query: 72 RALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIR---SALSPRAARVG 128 +A E+ ATP++ A +W++ L H R M +AF P+L +L L+R + + + Sbjct: 71 KANEEYHAATPFIGADNWQDGLRRHFRRMHQAFRTQPVLVELTLLRPYPHSADRTSMQAT 130 Query: 129 VQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAMV 188 +++S +A +V AG + E A + Y ++ HV G+ ++ + P +E Sbjct: 131 AAKLDSMVAAMVGAGFTAEQALEIYLSLLAHVCGAAMVEHQGIFATYDGGLPRGADET-- 188 Query: 189 IDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILDHAAR 228 PLLA++ ++GHRI ++ FE+ + IL A R Sbjct: 189 --ASAVPLLAELAAKGHRIDNVEDATFEFTFEAILAQAER 226 >tr|D1VAS0|D1VAS0_9ACTO Tax_Id=298654 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp. EuI1c] Length = 237 Score = 141 bits (356), Expect = 6e-32 Identities = 81/225 (36%), Positives = 125/225 (55%), Gaps = 5/225 (2%) Query: 1 MAKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFR 60 M + A +R+RR RGSI+ ++I++GA+E+A +VS+D LSM L + LGVGVTSIYWYFR Sbjct: 3 MPESETATRRRRRPRGSISADEIVRGAYEIAREVSLDQLSMSTLSERLGVGVTSIYWYFR 62 Query: 61 KKDDLLNAMTDRALREFVVATP-YVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSA 119 KK+DLL+AMT+ A P + + W L ++ R+ + +L DL+L R + Sbjct: 63 KKEDLLHAMTEVAAANLAERMPQFARSVPWPTMLHDYFTAYRRIHQEDEVLSDLLLARVS 122 Query: 120 LSPRAARVGV-QEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDN 178 R V VE+ + L +AG S E A ++ +S + RG++V R+ N A Sbjct: 123 TYSRQTTTQVFLPVEAIVEHLTDAGFSPELALQIFNTISTYTRGAIVYKRILGLNAA--- 179 Query: 179 APGDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCIL 223 A D + D PLL + + GH + + +FE+ L C++ Sbjct: 180 AILDERRHRMADWTVMPLLEGLVAAGHSLTGTTDDDFEFALSCLI 224 >tr|Q2J9T6|Q2J9T6_FRASC Tax_Id=106370 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 221 Score = 98.2 bits (243), Expect = 8e-19 Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 1/160 (0%) Query: 10 RQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAM 69 R RR RGSIN I+ G FE +D LSMP L +L VGVTSIYWYF+ K +LL+AM Sbjct: 13 RSRRARGSINAPGILAGVFEFCRDTPVDQLSMPRLAAYLDVGVTSIYWYFKSKRELLDAM 72 Query: 70 TDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIR-SALSPRAARVG 128 + AL F + P + W + L + + + CDLI R +L+ + Sbjct: 73 AEEALVSFYESMPALRGDAWEDVLREFFKNFYALLAVDDLKCDLIARRIGSLTYQETITS 132 Query: 129 VQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHR 168 +AGL +AG A+ + +S + RG ++ R Sbjct: 133 WPRAAELLAGLRDAGFPSSLAWHAFFTLSTYTRGFLLTER 172 >tr|Q0RTL8|Q0RTL8_FRAAA Tax_Id=326424 SubName: Full=Putative TetR-family transcriptional regulator;[Frankia alni] Length = 283 Score = 85.1 bits (209), Expect = 7e-15 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 10/167 (5%) Query: 4 QPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKD 63 QP R+RR RGS++ +I+ A +LA + + LSMP L + LG GV S+Y YF KD Sbjct: 17 QPPTVGRRRRARGSLSSGEIVAAARDLAAQDGLARLSMPALARRLGCGVMSVYRYFDTKD 76 Query: 64 DLLNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLIL------IR 117 DLL A+ D+ + + P WR+ L + R P +++L IR Sbjct: 77 DLLAALADQVMSDLHRQLPPAGDGPWRDELITYFTAYRDLMESFPAYREVVLYAPTFVIR 136 Query: 118 SALSPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSV 164 +AL+P R +++ I L+ AGL + DA Y+ + R V Sbjct: 137 AALTPAQLR----RLDTGIGLLLRAGLPLADAAAVYNVCFNYTRSFV 179 >tr|D6KEE0|D6KEE0_9ACTO Tax_Id=645465 SubName: Full=Tetracycline repressor protein class D;[Streptomyces sp. e14] Length = 243 Score = 79.3 bits (194), Expect = 4e-13 Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 14/223 (6%) Query: 2 AKQPAAEKRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRK 61 A++P A +R R E + + ++ A +L ++ + L+M LG+ LGV ++Y Y Sbjct: 25 AEKPGA-RRGRGESVGLTRQRVLDAALDLVDRRGLKALTMRSLGEQLGVEAMTLYHYVPN 83 Query: 62 KDDLLNAMTDRALREFVVATPYVE-AKDWRESLANHARTMRKAFMGNPILCDLILIRSAL 120 KD LL+ + ++ R A P ++ + DWR++L +A+ +R+ + +P + L +A Sbjct: 84 KDALLDGLVEQVFR---AAAPAMDGSADWRDALRAYAKALREGLLRHPAVLPL----AAS 136 Query: 121 SPRAARVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAP 180 P + + ++E+ + L E G ++ A +AVSV G VL Sbjct: 137 RPAVTQATLDDIEACLRMLTENGFTLGRALHALNAVSVFAIGHAVLEAQLVVGAEESGGT 196 Query: 181 GDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCIL 223 G +D E PL+A+ + R+G D + F + + +L Sbjct: 197 GWLAG---LDGERYPLIARAARD--RVGVDDGERFAFAVDAML 234 >tr|Q0RIZ3|Q0RIZ3_FRAAA Tax_Id=326424 SubName: Full=Putative transcriptional regulator of the TetR family;[Frankia alni] Length = 233 Score = 79.0 bits (193), Expect = 5e-13 Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 21/225 (9%) Query: 12 RRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTD 71 R RGS++ E I+ A LA + + +++ + LGV +++++F ++ DL++A+ Sbjct: 6 RLPRGSLDSEVILMAAERLAAEAGLAEVTIRKVAAVLGVQHPAVHYHFPRRHDLVDALLG 65 Query: 72 RALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSAL---SPRAARVG 128 RA+R F A P +++ DW L + R A +P L +L++ + A S +A Sbjct: 66 RAVRRFNEALPVIDSDDWETHLRGYWEGYRAALRSDPALFELVVGQWATMGRSQQALDSS 125 Query: 129 VQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRAND----------N 178 +++ + L+ AG + E A Y +S + RG + + + D + Sbjct: 126 YGRIDAQLGVLLRAGFTPEQAGYAYHLLSTYTRGCLASEHEFARYLGPDRDDALHGSHVD 185 Query: 179 APGDFEEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCIL 223 PGD ++ P L +VT G A + +F++GL I+ Sbjct: 186 LPGDLDQ--------FPNLHEVTKRGWSYTFATDADFDHGLTVII 222 >tr|D2AVQ3|D2AVQ3_STRRD Tax_Id=479432 SubName: Full=Putative transcriptional regulator, TetR family;[Streptosporangium roseum] Length = 249 Score = 78.6 bits (192), Expect = 6e-13 Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 20/228 (8%) Query: 9 KRQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNA 68 +RQRRE+ +++ E I+ A +L + ID LSM LG LG T+IYW+ KD+L+ Sbjct: 16 RRQRREQPALSREQIVSEALKLLDGEGIDALSMRRLGGRLGAVATAIYWHVANKDELIEL 75 Query: 69 MTDRALREFVVATPYVE-AKDWRESLANHARTMRKAFMGNPILCDLI--LIRSALSPRAA 125 + D E V P VE DWR + AR+MR + +P + ++ + + L P Sbjct: 76 VVDEVYSEMRV--PDVEDPADWRAAAVGCARSMRSVILRHPWMVSVLDEVGLAYLGPNMM 133 Query: 126 RVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRG-----SVVLHRLYEKNRANDNAP 180 R + + +A AG ++ +A V+ +V G + +L +L R+ + Sbjct: 134 R----QSDRMLAVFEAAGFALREADQAVQTVAAYVLGTATSEAAMLTKLAGGARSERDVV 189 Query: 181 GDF----EEAMVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILD 224 D E A + P L A T G E+ F YGL+ +LD Sbjct: 190 EDLWPAAEAAALAYPRLRELYA--TYRGEDPEKNREETFAYGLERVLD 235 >tr|D2AUS1|D2AUS1_STRRD Tax_Id=479432 SubName: Full=Putative transcriptional regulator, TetR family;[Streptosporangium roseum] Length = 268 Score = 78.2 bits (191), Expect = 8e-13 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%) Query: 17 SINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALRE 76 +++ + I++ A EL + +D LSM LG LG G TSIYW+ KD+LL + D + Sbjct: 29 ALSRDQIVRAAMELLDTEGLDALSMRRLGARLGSGATSIYWHVANKDELLELVMDEVFGK 88 Query: 77 FVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVGVQEVES-A 135 VA P WR++++ A +R A +P LI R +L P A + + + + + Sbjct: 89 --VALPDPSVVGWRDAVSMFAHGLRAALFEHPWSVALIGTRPSLGPNAMEISSRLLRTFS 146 Query: 136 IAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGD---------FEEA 186 +AG G++++ A SA+ +V G + A + ++A Sbjct: 147 LAGF--EGMALDYA---SSALMSYVLGVTTPEIAWRAAMAGAELSDEGLMAGMKSAVDKA 201 Query: 187 MVIDPETTPLLAQVTSEGHRIGAADEQNFEYGLKCILD 224 PE A+ E G + E NF++GL CILD Sbjct: 202 AADHPELAARYAEYAGEDP--GTSRELNFDFGLTCILD 237 >tr|B4VDX0|B4VDX0_9ACTO Tax_Id=465541 SubName: Full=Transcriptional regulator;[Streptomyces sp. Mg1] Length = 251 Score = 77.4 bits (189), Expect = 1e-12 Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 13/219 (5%) Query: 7 AEKRQRRER-GSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDL 65 AE+ +RR R G + + I GA ELA++ ++ L+M LG+HL V TS+Y + +++L Sbjct: 31 AERERRRPRQGGLTLDRITAGALELADREGLEALTMRRLGEHLQVRHTSLYRHVASREEL 90 Query: 66 LNAMTDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAA 125 L D L E + P ++ DWR L AR R+ +P + L+ L P A Sbjct: 91 LIETVDHMLGE--IRLPSLDG-DWRAGLEAGAREFRRVLAAHPAVVPLLTAGQLLGPNAL 147 Query: 126 RVGVQEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEE 185 R E A+A L+ G + A Y V+ V G+ VL A A E Sbjct: 148 RAR----EHALAELLAHGWAPRPAVHVYLTVTHFVIGAAVLDSAGAARTAGQRA-AMAEL 202 Query: 186 AMVIDPETTPLLAQVTSEGHRIGAADEQ-NFEYGLKCIL 223 + P T P+ V + + D Q F++GL+ +L Sbjct: 203 FASLSPRTHPV---VHRHAELLNSLDPQAEFDFGLRTLL 238 >tr|D1BUS7|D1BUS7_XYLCX Tax_Id=446471 SubName: Full=Transcriptional regulator, TetR family;[Xylanimonas cellulosilytica] Length = 268 Score = 76.6 bits (187), Expect = 2e-12 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 18/235 (7%) Query: 10 RQRRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAM 69 R R + S+ E + + A LA+ +D +SM L + L VG ++Y Y K LL+ M Sbjct: 22 RARGPKPSLTVEQVAQAAIALADDAGLDAVSMKRLAEVLKVGTMTLYTYVPDKATLLHLM 81 Query: 70 TDRALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVGV 129 DRAL E V P A DWRE L A + + + G+P + + + ++P R Sbjct: 82 LDRALAE--VTLPDASA-DWREHLRTSAEALLELYQGHPWIMQINVEGPPVTPHQMRY-- 136 Query: 130 QEVESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSV-----VLHRLYEKNRANDNAPGDFE 184 +ES + L + GL+ ++ D ++S V G+ +L E ++D Sbjct: 137 --LESVLTALRKTGLNHGESLDIALSISYFVLGAAKLTVGILRAEQESTLSDDETHTRRA 194 Query: 185 EAM--VIDPETTPLLAQVTS----EGHRIGAADEQNFEYGLKCILDHAARLIEEK 233 EA+ V+DP P++ Q + E + F +GL ++D IE + Sbjct: 195 EALGRVLDPAEFPMVLQAMTAPPPEPPPVDIWASLGFRFGLDRLIDGIGTYIETR 249 >tr|D2PNT5|D2PNT5_KRIFD Tax_Id=479435 SubName: Full=Transcriptional regulator, TetR family;[Kribbella flavida] Length = 217 Score = 75.9 bits (185), Expect = 4e-12 Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 9/213 (4%) Query: 12 RRERGSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTD 71 R R ++N E I++ A +L E D S+ L LGVG ++Y YFR KDDL +A+ D Sbjct: 4 RTPRNTLNAELIVRTALDLMEARGTDAFSLRGLAAELGVGPMALYTYFRNKDDLYDAVRD 63 Query: 72 RALREFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVGVQE 131 + + P W + + R +R+ + +P L L+ R ARV Sbjct: 64 HLM---ALVPPVPAGASWPDQVRAVCRGLRRLMLEHPCLAQLLASRPLSGHETARV---- 116 Query: 132 VESAIAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAMVIDP 191 E + L +AG E A T++ + V G+ R + A M P Sbjct: 117 AEGLLGVLRDAGFDNETAARTHTTLFTFVLGATSWEIQMAAERRDPEAWRRLRTTMEALP 176 Query: 192 ETT-PLLAQVTSEGHRIGAADEQNFEYGLKCIL 223 T P++ + E R D+Q F+YGL +L Sbjct: 177 ATEFPVVVALAPELARTTGGDDQ-FDYGLDLLL 208 >tr|B4EDH4|B4EDH4_BURCJ Tax_Id=216591 (tetR)SubName: Full=Tetracycline repressor protein;[Burkholderia cepacia] Length = 210 Score = 75.9 bits (185), Expect = 4e-12 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%) Query: 23 IIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALREFVVATP 82 +++ A EL ++V ID LS L + LGV ++YW+FR K +LL+AM + + E A+ Sbjct: 13 VLRAALELLDEVGIDGLSTRKLAERLGVQSPTLYWHFRNKGELLDAMAEAIMLERHDASL 72 Query: 83 YVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVGVQEVESAIAGLVEA 142 + W L ++AR+ R+A + D + + PRA G +E +A L +A Sbjct: 73 PRPGEAWDAWLLDNARSFRRALLA---YRDDARLHAGTRPRALHFG--SIERKVALLCDA 127 Query: 143 GLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAMVIDPETTPLLAQVTS 202 G + +DA D A+ V G V L E+ A+ +A +A + D PLLA+ + Sbjct: 128 GFAPDDAVDVMYALGRFVVGWV----LEEQAEADGDA-----DAPLPDAAEYPLLAKGWA 178 Query: 203 EGHRIGAADEQNFEYGLKCILDHA 226 G ++ FE G+ I+D A Sbjct: 179 ALRARGG--DEAFERGVALIVDGA 200 >tr|A7L849|A7L849_KLEPN Tax_Id=573 (tetR)SubName: Full=TetR;[Klebsiella pneumoniae] Length = 213 Score = 73.9 bits (180), Expect = 2e-11 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 19/212 (8%) Query: 18 INPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALRE- 76 + P +I+ A +L +V ++ L+ L K LGV ++YW+FR K LL+A+ + L E Sbjct: 4 LQPNTVIRVALDLLNEVGVEALTTRKLAKRLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 77 FVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVGVQEVESAI 136 + P V+ DWR L +AR+ R+A + D I + P A ++ V V++ + Sbjct: 64 HTHSVPRVD-DDWRSFLIGNARSFRQALLA---YRDGARIHAGTRPGAPQMEV--VDAQL 117 Query: 137 AGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAMVIDPETTPL 196 L EAG S DA + +S G+V+ + +A D+ G+ + E PL Sbjct: 118 RFLCEAGFSAWDAVNALMTISYFTVGAVL------EEQAGDSDAGERGGTI----EQAPL 167 Query: 197 LAQVTSEGHRIGAADEQNFEYGLKCILDHAAR 228 L V G + FE GL I+D A+ Sbjct: 168 LRAVIDTFDEAG--PDAVFELGLAVIVDGLAK 197 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.318 0.133 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,918,240,746 Number of extensions: 75506989 Number of successful extensions: 193134 Number of sequences better than 10.0: 1837 Number of HSP's gapped: 194487 Number of HSP's successfully gapped: 1837 Length of query: 245 Length of database: 4,236,830,644 Length adjustment: 134 Effective length of query: 111 Effective length of database: 2,560,776,868 Effective search space: 284246232348 Effective search space used: 284246232348 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 79 (35.0 bits)