BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2624 (181 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0QVM3|RIMP_MYCS2 Tax_Id=246196 (rimP)RecName: Full=Ribosome ... 351 2e-95 sp|Q1BA97|RIMP_MYCSS Tax_Id=164756 (rimP)RecName: Full=Ribosome ... 217 4e-55 sp|A1UER5|RIMP_MYCSK Tax_Id=189918 (rimP)RecName: Full=Ribosome ... 217 4e-55 sp|A3PY72|RIMP_MYCSJ Tax_Id=164757 (rimP)RecName: Full=Ribosome ... 217 4e-55 sp|A1T7H5|RIMP_MYCVP Tax_Id=350058 (rimP)RecName: Full=Ribosome ... 216 7e-55 sp|B2HKR9|RIMP_MYCMM Tax_Id=216594 (rimP)RecName: Full=Ribosome ... 215 2e-54 sp|A4TCF3|RIMP_MYCGI Tax_Id=350054 (rimP)RecName: Full=Ribosome ... 214 3e-54 sp|A0PQC1|RIMP_MYCUA Tax_Id=362242 (rimP)RecName: Full=Ribosome ... 212 1e-53 sp|A0QIY5|RIMP_MYCA1 Tax_Id=243243 (rimP)RecName: Full=Ribosome ... 212 2e-53 sp|Q73VV1|RIMP_MYCPA Tax_Id=1770 (rimP)RecName: Full=Ribosome ma... 211 2e-53 tr|D5PJD6|D5PJD6_9MYCO Tax_Id=525368 SubName: Full=Putative unch... 207 3e-52 sp|P67214|RIMP_MYCTU Tax_Id=1773 (rimP)RecName: Full=Ribosome ma... 193 7e-48 sp|A5U6J4|RIMP_MYCTA Tax_Id=419947 (rimP)RecName: Full=Ribosome ... 193 7e-48 sp|C1AFV6|RIMP_MYCBT Tax_Id=561275 (rimP)RecName: Full=Ribosome ... 193 7e-48 sp|A1KMI5|RIMP_MYCBP Tax_Id=410289 (rimP)RecName: Full=Ribosome ... 193 7e-48 sp|P67215|RIMP_MYCBO Tax_Id=1765 (rimP)RecName: Full=Ribosome ma... 193 7e-48 tr|C6DWZ9|C6DWZ9_MYCTK Tax_Id=478434 (rimP)RecName: Full=Ribosom... 193 7e-48 tr|A5WR95|A5WR95_MYCTF Tax_Id=336982 (rimP)RecName: Full=Ribosom... 193 7e-48 tr|D6G2B9|D6G2B9_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 193 7e-48 tr|D6FNQ2|D6FNQ2_MYCTU Tax_Id=611304 SubName: Full=Putative unch... 193 7e-48 tr|D6FK72|D6FK72_MYCTU Tax_Id=611303 SubName: Full=Putative unch... 193 7e-48 tr|D6F7W7|D6F7W7_MYCTU Tax_Id=611302 SubName: Full=Putative unch... 193 7e-48 tr|D5ZK32|D5ZK32_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 193 7e-48 tr|D5Z725|D5Z725_MYCTU Tax_Id=537209 SubName: Full=Putative unch... 193 7e-48 tr|D5YVC4|D5YVC4_MYCTU Tax_Id=515616 SubName: Full=Putative unch... 193 7e-48 tr|D5YIE5|D5YIE5_MYCTU Tax_Id=520140 SubName: Full=Putative unch... 193 7e-48 tr|D5Y6T0|D5Y6T0_MYCTU Tax_Id=520141 SubName: Full=Putative unch... 193 7e-48 tr|D5XXH9|D5XXH9_MYCTU Tax_Id=515617 SubName: Full=Putative unch... 193 7e-48 tr|A4KKB1|A4KKB1_MYCTU Tax_Id=395095 (rimP)RecName: Full=Ribosom... 193 7e-48 tr|A2VLH5|A2VLH5_MYCTU Tax_Id=348776 (rimP)RecName: Full=Ribosom... 193 7e-48 sp|B1MD92|RIMP_MYCA9 Tax_Id=561007 (rimP)RecName: Full=Ribosome ... 161 4e-38 tr|C3JM52|C3JM52_RHOER Tax_Id=596309 (rimP)RecName: Full=Ribosom... 155 3e-36 sp|C0ZYA2|RIMP_RHOE4 Tax_Id=234621 (rimP)RecName: Full=Ribosome ... 154 3e-36 sp|C1B310|RIMP_RHOOB Tax_Id=632772 (rimP)RecName: Full=Ribosome ... 154 4e-36 sp|Q0S222|RIMP_RHOSR Tax_Id=101510 (rimP)RecName: Full=Ribosome ... 149 1e-34 tr|D5PMS6|D5PMS6_COREQ Tax_Id=525370 SubName: Full=Putative unch... 142 2e-32 sp|Q5YSC3|RIMP_NOCFA Tax_Id=37329 (rimP)RecName: Full=Ribosome m... 135 2e-30 tr|D1VB72|D1VB72_9ACTO Tax_Id=298654 (rimP)RecName: Full=Ribosom... 116 1e-24 sp|Q9Z5J2|RIMP_MYCLE Tax_Id=1769 (rimP)RecName: Full=Putative ri... 113 1e-23 tr|D3M5S7|D3M5S7_9ACTO Tax_Id=656024 (rimP)RecName: Full=Ribosom... 111 4e-23 tr|D0LBI5|D0LBI5_GORB4 Tax_Id=526226 (rimP)RecName: Full=Ribosom... 110 7e-23 sp|A4FM36|RIMP_SACEN Tax_Id=405948 (rimP)RecName: Full=Ribosome ... 108 4e-22 tr|C7QDY6|C7QDY6_CATAD Tax_Id=479433 (rimP)RecName: Full=Ribosom... 107 5e-22 tr|C1YQY3|C1YQY3_NOCDA Tax_Id=446468 (rimP)RecName: Full=Ribosom... 107 5e-22 tr|D1XED8|D1XED8_9ACTO Tax_Id=647653 (rimP)RecName: Full=Ribosom... 107 6e-22 >sp|A0QVM3|RIMP_MYCS2 Tax_Id=246196 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium smegmatis] Length = 181 Score = 351 bits (900), Expect = 2e-95 Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MAPDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLD 60 MAPDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLD Sbjct: 1 MAPDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLD 60 Query: 61 AVAMLSRLASGLLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSL 120 AVAMLSRLASGLLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSL Sbjct: 61 AVAMLSRLASGLLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSL 120 Query: 121 TARLGGTDGDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKGAR 180 TARLGGTDGDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKGAR Sbjct: 121 TARLGGTDGDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKGAR 180 Query: 181 A 181 A Sbjct: 181 A 181 >sp|Q1BA97|RIMP_MYCSS Tax_Id=164756 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium sp.] Length = 192 Score = 217 bits (553), Expect = 4e-55 Identities = 121/192 (63%), Positives = 144/192 (75%), Gaps = 11/192 (5%) Query: 1 MAPDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLD 60 MAP+PKL LPSQ+QV ELLDGEFARAGYEI++VV++ RP RIT+V DGD+ LDLD Sbjct: 1 MAPEPKLRPTGLPSQEQVKELLDGEFARAGYEIENVVIDGGARPPRITVVVDGDRPLDLD 60 Query: 61 AVAMLSRLASGLLDTVD------TGD-TPYVLEVTSPGVDRPLTTEKHFRRARGRKAELS 113 VA LSR AS LD VD T D YVLEVTSPGVDRPLTTEKH+RRARGRK EL+ Sbjct: 61 TVASLSRSASEQLDRVDESGPGVTADAATYVLEVTSPGVDRPLTTEKHYRRARGRKVELT 120 Query: 114 LADGSSLTARLGG--TDGDQVNVVVAQG--KDFAVRQIPLREITKAVVQVEFSPPNRREL 169 L+DGS LT R+G DG+ V++VV +G +F+VR++PL I KAVVQVEFSPP++REL Sbjct: 121 LSDGSQLTGRIGALTADGESVSLVVREGARANFSVRELPLEGIVKAVVQVEFSPPSQREL 180 Query: 170 ELAEQTGKGARA 181 EL Q + A A Sbjct: 181 ELTGQPREEAGA 192 >sp|A1UER5|RIMP_MYCSK Tax_Id=189918 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium sp.] Length = 192 Score = 217 bits (553), Expect = 4e-55 Identities = 121/192 (63%), Positives = 144/192 (75%), Gaps = 11/192 (5%) Query: 1 MAPDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLD 60 MAP+PKL LPSQ+QV ELLDGEFARAGYEI++VV++ RP RIT+V DGD+ LDLD Sbjct: 1 MAPEPKLRPTGLPSQEQVKELLDGEFARAGYEIENVVIDGGARPPRITVVVDGDRPLDLD 60 Query: 61 AVAMLSRLASGLLDTVD------TGD-TPYVLEVTSPGVDRPLTTEKHFRRARGRKAELS 113 VA LSR AS LD VD T D YVLEVTSPGVDRPLTTEKH+RRARGRK EL+ Sbjct: 61 TVASLSRSASEQLDRVDESGPGVTADAATYVLEVTSPGVDRPLTTEKHYRRARGRKVELT 120 Query: 114 LADGSSLTARLGG--TDGDQVNVVVAQG--KDFAVRQIPLREITKAVVQVEFSPPNRREL 169 L+DGS LT R+G DG+ V++VV +G +F+VR++PL I KAVVQVEFSPP++REL Sbjct: 121 LSDGSQLTGRIGALTADGESVSLVVREGARANFSVRELPLEGIVKAVVQVEFSPPSQREL 180 Query: 170 ELAEQTGKGARA 181 EL Q + A A Sbjct: 181 ELTGQPREEAGA 192 >sp|A3PY72|RIMP_MYCSJ Tax_Id=164757 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium sp.] Length = 192 Score = 217 bits (553), Expect = 4e-55 Identities = 121/192 (63%), Positives = 144/192 (75%), Gaps = 11/192 (5%) Query: 1 MAPDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLD 60 MAP+PKL LPSQ+QV ELLDGEFARAGYEI++VV++ RP RIT+V DGD+ LDLD Sbjct: 1 MAPEPKLRPTGLPSQEQVKELLDGEFARAGYEIENVVIDGGARPPRITVVVDGDRPLDLD 60 Query: 61 AVAMLSRLASGLLDTVD------TGD-TPYVLEVTSPGVDRPLTTEKHFRRARGRKAELS 113 VA LSR AS LD VD T D YVLEVTSPGVDRPLTTEKH+RRARGRK EL+ Sbjct: 61 TVASLSRSASEQLDRVDESGPGVTADAATYVLEVTSPGVDRPLTTEKHYRRARGRKVELT 120 Query: 114 LADGSSLTARLGG--TDGDQVNVVVAQG--KDFAVRQIPLREITKAVVQVEFSPPNRREL 169 L+DGS LT R+G DG+ V++VV +G +F+VR++PL I KAVVQVEFSPP++REL Sbjct: 121 LSDGSQLTGRIGALTADGESVSLVVREGARANFSVRELPLEGIVKAVVQVEFSPPSQREL 180 Query: 170 ELAEQTGKGARA 181 EL Q + A A Sbjct: 181 ELTGQPREEAGA 192 >sp|A1T7H5|RIMP_MYCVP Tax_Id=350058 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium vanbaalenii] Length = 176 Score = 216 bits (551), Expect = 7e-55 Identities = 115/174 (66%), Positives = 139/174 (79%), Gaps = 3/174 (1%) Query: 9 SADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRL 68 S LPSQ+QV+ELLDGEF RAGY+++DVV++AA+RP RIT+V D D GLDLD+VA LSR+ Sbjct: 5 STGLPSQRQVVELLDGEFTRAGYDLEDVVIDAASRPPRITVVTDSDHGLDLDSVAELSRI 64 Query: 69 ASGLLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 AS LLD +D+ PYVLEVTSPGVDRPLTTEKH+RRARGR AE++L DGS LT R+GG Sbjct: 65 ASELLDGLDS--APYVLEVTSPGVDRPLTTEKHYRRARGRLAEITLTDGSVLTGRIGGVA 122 Query: 129 GDQVNVVVAQGK-DFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKGARA 181 V VVV +G+ + +VR+I L I KAVVQVEFSPP+ RELELA + K ARA Sbjct: 123 DGTVGVVVREGRSNLSVREIALNAIAKAVVQVEFSPPSPRELELAGVSRKEARA 176 >sp|B2HKR9|RIMP_MYCMM Tax_Id=216594 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium marinum] Length = 177 Score = 215 bits (547), Expect = 2e-54 Identities = 111/168 (66%), Positives = 133/168 (79%), Gaps = 1/168 (0%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ QVIELL GEFARAGYEI+DVV++ RP RIT+VADGD LDLD +A+LSR AS Sbjct: 5 LPSQTQVIELLGGEFARAGYEIEDVVIDHRARPPRITVVADGDTTLDLDTIAVLSRSASS 64 Query: 72 LLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQ 131 LLD++D YVLEV+SPG+DRPLT+EKHFRRARGRK EL+LADGS LT R+G Sbjct: 65 LLDSLDNIGDSYVLEVSSPGIDRPLTSEKHFRRARGRKVELTLADGSQLTGRIGALQSGS 124 Query: 132 VNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKGA 179 +++VV G+++ VR+IPL E+ KAVVQVEFSPPN ELELA TG+ A Sbjct: 125 LDLVVRAGREWKVREIPLAEVEKAVVQVEFSPPNPAELELA-TTGRAA 171 >sp|A4TCF3|RIMP_MYCGI Tax_Id=350054 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium gilvum] Length = 178 Score = 214 bits (546), Expect = 3e-54 Identities = 113/167 (67%), Positives = 136/167 (81%), Gaps = 3/167 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QV+ELLDGEFARAGY+I+DVV++AATRP RI ++ADGD+GLDLDAVA LSRLAS Sbjct: 12 LPSQRQVVELLDGEFARAGYDIEDVVIDAATRPPRIVVIADGDRGLDLDAVAELSRLASE 71 Query: 72 LLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQ 131 LDT+DT PYVLEVTSPGVDRPLT EKH+RRA+GR AE++LADGS+LT R+G Sbjct: 72 QLDTLDT--PPYVLEVTSPGVDRPLTEEKHYRRAQGRLAEVTLADGSTLTGRIGAVQNAT 129 Query: 132 VNVVVAQGK-DFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGK 177 V +VV + + + VR I L + KAVVQVEFSPP+ RELELA +GK Sbjct: 130 VALVVREARSNLTVRDIALDAVVKAVVQVEFSPPSPRELELAGVSGK 176 >sp|A0PQC1|RIMP_MYCUA Tax_Id=362242 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium ulcerans] Length = 177 Score = 212 bits (540), Expect = 1e-53 Identities = 110/168 (65%), Positives = 132/168 (78%), Gaps = 1/168 (0%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ QVIELL GEFARAGYEI+DVV++ RP RIT+VADGD LDLD +A+LSR AS Sbjct: 5 LPSQTQVIELLGGEFARAGYEIEDVVIDHRARPPRITVVADGDTTLDLDTIAVLSRSASS 64 Query: 72 LLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQ 131 LLD++D YVLEV+SPG+DRPLT+EKHFRRARG K EL+LADGS LT R+G Sbjct: 65 LLDSLDNIGDSYVLEVSSPGIDRPLTSEKHFRRARGPKVELTLADGSQLTGRIGALQSGS 124 Query: 132 VNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKGA 179 +++VV G+++ VR+IPL E+ KAVVQVEFSPPN ELELA TG+ A Sbjct: 125 LDLVVRAGREWKVREIPLAEVEKAVVQVEFSPPNPAELELA-TTGRAA 171 >sp|A0QIY5|RIMP_MYCA1 Tax_Id=243243 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium avium] Length = 178 Score = 212 bits (539), Expect = 2e-53 Identities = 108/161 (67%), Positives = 130/161 (80%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ QVIELL GEFARAGYEI+DVV++A RP RIT++ADGD GLDLDA A LSR AS Sbjct: 5 LPSQTQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASA 64 Query: 72 LLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQ 131 LLD +DT + YVLEV+SPGVDRPL T KHFRRARGRK ++ L+D S++T R+G T D Sbjct: 65 LLDKLDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGETGDDT 124 Query: 132 VNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 V +VV G+D+A+R+IPL ++ KAVVQVEFSPP + ELELA Sbjct: 125 VALVVRAGRDWAIREIPLGDVVKAVVQVEFSPPAQAELELA 165 >sp|Q73VV1|RIMP_MYCPA Tax_Id=1770 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium paratuberculosis] Length = 178 Score = 211 bits (538), Expect = 2e-53 Identities = 107/161 (66%), Positives = 130/161 (80%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ QVIELL GEFARAGYEI+DVV++A RP RIT++ADGD GLDLDA A LSR AS Sbjct: 5 LPSQTQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASA 64 Query: 72 LLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQ 131 LLD +DT + YVLEV+SPGVDRPL T KHFRRARGRK ++ L+D S++T R+G T D Sbjct: 65 LLDKLDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGETGDDT 124 Query: 132 VNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 + +VV G+D+A+R+IPL ++ KAVVQVEFSPP + ELELA Sbjct: 125 IALVVRAGRDWAIREIPLGDVVKAVVQVEFSPPAQAELELA 165 >tr|D5PJD6|D5PJD6_9MYCO Tax_Id=525368 SubName: Full=Putative uncharacterized protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 175 Score = 207 bits (528), Expect = 3e-52 Identities = 107/161 (66%), Positives = 127/161 (78%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ QVIELL GEFARAGYEI+DVV++A RP RI ++ADGDK LDLD +A LSR AS Sbjct: 5 LPSQTQVIELLGGEFARAGYEIEDVVIDARARPPRIMVIADGDKALDLDTIATLSRSASA 64 Query: 72 LLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQ 131 LLD +D YVLEV+SPGVDRPLT+EKHFRRARGRK ++ L+DGS LT R+G T GD Sbjct: 65 LLDGLDDVGDRYVLEVSSPGVDRPLTSEKHFRRARGRKVDVVLSDGSRLTGRVGETRGDT 124 Query: 132 VNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 V +VV G+D+ +R+I +I KAVVQVEFSPP + ELELA Sbjct: 125 VALVVRAGRDYRLREIARADIAKAVVQVEFSPPAQAELELA 165 >sp|P67214|RIMP_MYCTU Tax_Id=1773 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium tuberculosis] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >sp|A5U6J4|RIMP_MYCTA Tax_Id=419947 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium tuberculosis] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >sp|C1AFV6|RIMP_MYCBT Tax_Id=561275 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium bovis] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >sp|A1KMI5|RIMP_MYCBP Tax_Id=410289 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium bovis] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >sp|P67215|RIMP_MYCBO Tax_Id=1765 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium bovis] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|C6DWZ9|C6DWZ9_MYCTK Tax_Id=478434 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium tuberculosis] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|A5WR95|A5WR95_MYCTF Tax_Id=336982 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium tuberculosis] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D6G2B9|D6G2B9_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D6FNQ2|D6FNQ2_MYCTU Tax_Id=611304 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis K85] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D6FK72|D6FK72_MYCTU Tax_Id=611303 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis CPHL_A] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D6F7W7|D6F7W7_MYCTU Tax_Id=611302 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T46] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D5ZK32|D5ZK32_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D5Z725|D5Z725_MYCTU Tax_Id=537209 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis GM 1503] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D5YVC4|D5YVC4_MYCTU Tax_Id=515616 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis 02_1987] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D5YIE5|D5YIE5_MYCTU Tax_Id=520140 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis EAS054] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D5Y6T0|D5Y6T0_MYCTU Tax_Id=520141 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T85] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|D5XXH9|D5XXH9_MYCTU Tax_Id=515617 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T92] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|A4KKB1|A4KKB1_MYCTU Tax_Id=395095 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium tuberculosis str. Haarlem] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >tr|A2VLH5|A2VLH5_MYCTU Tax_Id=348776 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium tuberculosis C] Length = 183 Score = 193 bits (491), Expect = 7e-48 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ+QVIELL +FA AGYEI+DVV++A RP RI ++ADGD LDLD +A LSR AS Sbjct: 5 LPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASA 64 Query: 72 LLDTVDTGDT---PYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTD 128 LLD +D + Y+LEV+SPGV+RPLT+EKHFRRARGRK EL L+DGS LT R+G Sbjct: 65 LLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMR 124 Query: 129 GDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 V +V+ + + +AVR+IPL EI KAVVQVEFSPP ELELA+ + G Sbjct: 125 AGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMG 174 >sp|B1MD92|RIMP_MYCA9 Tax_Id=561007 (rimP)RecName: Full=Ribosome maturation factor rimP;[Mycobacterium abscessus] Length = 189 Score = 161 bits (407), Expect = 4e-38 Identities = 96/184 (52%), Positives = 118/184 (64%), Gaps = 8/184 (4%) Query: 4 DPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVN---AATRPARITIVADGDKGLDLD 60 DP S LPS QV+ELL EF+R+G EI+ VVV+ A RP+RI +V D D +DLD Sbjct: 6 DPSDSSTGLPSDDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDSDTPVDLD 65 Query: 61 AVAMLSRLASGLLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSL 120 AVA LSR AS LLD DTG Y LE+T+PGVDRPLTT HFRRA R A++ L +G L Sbjct: 66 AVAGLSRTASALLDEADTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLTNGEDL 125 Query: 121 TARLGGTDGDQVNVVV---AQGKDFAVRQIPLREITKAVVQVEFSPPNRRELEL--AEQT 175 R+G T D V VV+ +G + VR + +I AVVQVEF+ PN +EL L A +T Sbjct: 126 LGRIGITHDDGVQVVLRKPIKGTGWTVRDLAFSDIESAVVQVEFNTPNPQELNLAGAAET 185 Query: 176 GKGA 179 G GA Sbjct: 186 GGGA 189 >tr|C3JM52|C3JM52_RHOER Tax_Id=596309 (rimP)RecName: Full=Ribosome maturation factor rimP;[Rhodococcus erythropolis SK121] Length = 206 Score = 155 bits (391), Expect = 3e-36 Identities = 81/162 (50%), Positives = 114/162 (70%), Gaps = 2/162 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 +PS+++VIEL+ GY+++DVVV +A + + + I+ D D G++LDA A +SRL S Sbjct: 3 VPSRERVIELISELVHAQGYDVEDVVVTSAGKHSAVRIMVDSDAGIELDAAAEISRLVSE 62 Query: 72 LLDTVDT-GDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGD 130 L DT++ G+TPY LEVTSPG+DRPLT ++H+RRARGRKA + LA G ++ R+G + D Sbjct: 63 LFDTLEEIGETPYTLEVTSPGIDRPLTLDRHWRRARGRKARIDLA-GETVVGRIGTLNDD 121 Query: 131 QVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 V VV+ VR+I L ++ KAVVQVEFS P+ ELELA Sbjct: 122 SVAVVIGGRGGLTVREIALGDVQKAVVQVEFSKPSEAELELA 163 >sp|C0ZYA2|RIMP_RHOE4 Tax_Id=234621 (rimP)RecName: Full=Ribosome maturation factor rimP;[Rhodococcus erythropolis] Length = 206 Score = 154 bits (390), Expect = 3e-36 Identities = 81/162 (50%), Positives = 114/162 (70%), Gaps = 2/162 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 +PS+++VIEL+ GY+++DVVV +A + + + I+ D D G++LDA A +SRL S Sbjct: 3 VPSRERVIELISELVHAQGYDVEDVVVTSAGKHSAVRIMVDSDAGIELDAAAEISRLVSE 62 Query: 72 LLDTVDT-GDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGD 130 L D+++ G+TPY LEVTSPG+DRPLT E+H+RRARGRKA + LA G ++ R+G + D Sbjct: 63 LFDSLEEIGETPYTLEVTSPGIDRPLTLERHWRRARGRKARIDLA-GETVVGRIGTLNDD 121 Query: 131 QVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 V VV+ VR+I L ++ KAVVQVEFS P+ ELELA Sbjct: 122 SVAVVIGGRGGLTVREIALGDVQKAVVQVEFSKPSEAELELA 163 >sp|C1B310|RIMP_RHOOB Tax_Id=632772 (rimP)RecName: Full=Ribosome maturation factor rimP;[Rhodococcus opacus] Length = 190 Score = 154 bits (389), Expect = 4e-36 Identities = 84/162 (51%), Positives = 112/162 (69%), Gaps = 2/162 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 +PS+++V EL+ R GY+++DV V A + + + I+ D D GL+LDAVA LS S Sbjct: 3 VPSKERVTELISDLVQRQGYDVEDVAVTLAGKHSAVRIMVDSDAGLELDAVANLSHEISE 62 Query: 72 LLDTV-DTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGD 130 + D+V D G++PY LEVTSPG+DRPLT E+H+RRARGRKA + LA ++ R+G DGD Sbjct: 63 VFDSVSDFGESPYTLEVTSPGIDRPLTHERHWRRARGRKARIDLAH-ETVVGRIGALDGD 121 Query: 131 QVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 V VV+ VR+I L +I KAVVQVEFS P+ RELELA Sbjct: 122 SVAVVIGSRTGPDVRRIALADIQKAVVQVEFSKPDPRELELA 163 >sp|Q0S222|RIMP_RHOSR Tax_Id=101510 (rimP)RecName: Full=Ribosome maturation factor rimP;[Rhodococcus sp.] Length = 190 Score = 149 bits (376), Expect = 1e-34 Identities = 82/162 (50%), Positives = 111/162 (68%), Gaps = 2/162 (1%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 +PS+++V EL+ R GY+++DV V A R + + I+ D D GL+LDAVA LS S Sbjct: 3 VPSKERVTELISDLVQRQGYDLEDVAVTLAGRHSAVRIMVDSDAGLELDAVANLSHEISE 62 Query: 72 LLDTV-DTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGD 130 + D+V D G++PY LEVTSPG+ RPLT E+H+RRARGR+A + LA ++ R+G DGD Sbjct: 63 VFDSVSDFGESPYTLEVTSPGIGRPLTHERHWRRARGRRARIDLAH-ETVVGRIGLLDGD 121 Query: 131 QVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 V VV+ VR++ L +I KAVVQVEFS P+ RELELA Sbjct: 122 SVAVVIGSRTGPEVRRVALPDIQKAVVQVEFSKPDPRELELA 163 >tr|D5PMS6|D5PMS6_COREQ Tax_Id=525370 SubName: Full=Putative uncharacterized protein;[Rhodococcus equi ATCC 33707] Length = 189 Score = 142 bits (357), Expect = 2e-32 Identities = 79/163 (48%), Positives = 112/163 (68%), Gaps = 4/163 (2%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 +PS+++V+ELL R GY+++DV + A R + + ++ D D GL+LD VA LS + S Sbjct: 3 VPSRERVVELLADPIGREGYDLEDVTITLAGRHSSVRVMVDSDSGLELDEVARLSHVISD 62 Query: 72 LLDTV-DTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGG-TDG 129 + D D G++PY LEVTSPG+DRPLT +H+RRA+GRK + LA+ S+T R+G TDG Sbjct: 63 VFDAASDFGESPYTLEVTSPGIDRPLTEGRHWRRAQGRKVLVELAE-ESVTGRVGRLTDG 121 Query: 130 DQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELA 172 VV A+G VR++ L ++ KAVVQVEFS P+ +ELELA Sbjct: 122 GVDLVVKAKGGP-VVRRVELADVKKAVVQVEFSRPDAKELELA 163 >sp|Q5YSC3|RIMP_NOCFA Tax_Id=37329 (rimP)RecName: Full=Ribosome maturation factor rimP;[Nocardia farcinica] Length = 217 Score = 135 bits (340), Expect = 2e-30 Identities = 78/181 (43%), Positives = 113/181 (62%), Gaps = 14/181 (7%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPA----RITIVADGDKGLDLDAVAMLSR 67 +P++++V +L+ G R G++++ V + A A R+T+V D D DLDAVA LS Sbjct: 3 MPTEERVSQLVAGLVERRGFDLEGVEITRAGSRADAQPRVTVVVDSDGAADLDAVAELSS 62 Query: 68 LASGLLDTVDT-GDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADG--------- 117 S +LD D GD+PY+LEVT+PGVDRPLT +H+RRA+GRK ++L G Sbjct: 63 EMSVVLDDTDIFGDSPYLLEVTTPGVDRPLTAPRHWRRAQGRKVRITLRPGAEPPDPGGS 122 Query: 118 SSLTARLGGTDGDQVNVVVAQGKDFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGK 177 + AR+G DG+Q+ +V+ ++ ++PL +I +AVVQVEFSPP RELELA Sbjct: 123 AGFEARVGVLDGEQIALVLGGKRNPHRVRVPLADIERAVVQVEFSPPGARELELAGGVAP 182 Query: 178 G 178 G Sbjct: 183 G 183 >tr|D1VB72|D1VB72_9ACTO Tax_Id=298654 (rimP)RecName: Full=Ribosome maturation factor rimP;[Frankia sp. EuI1c] Length = 277 Score = 116 bits (291), Expect = 1e-24 Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 9/156 (5%) Query: 17 QVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLDTV 76 ++ + L ARAG+++DD+ ++ A + + + D D G+DLDAVA SRL S LLD V Sbjct: 23 EIRDRLAEALARAGFDLDDLSLSRAGSRSVLRVAVDRDDGIDLDAVADASRLISDLLDQV 82 Query: 77 DTGDTP--YVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQVNV 134 D G YVLEVTSPGVDRPLT +H+RRARGR E DG+ + R+ G D + V++ Sbjct: 83 DEGGLAGAYVLEVTSPGVDRPLTEPRHWRRARGRLVEARRVDGTVVLGRVLGADDEGVDL 142 Query: 135 VVAQGK-------DFAVRQIPLREITKAVVQVEFSP 163 VA G + ++ ++ +AVVQ+EF P Sbjct: 143 AVAAGPVRRGRPVKTKIERLRFADVARAVVQIEFGP 178 >sp|Q9Z5J2|RIMP_MYCLE Tax_Id=1769 (rimP)RecName: Full=Putative ribosome maturation factor rimP;[Mycobacterium leprae] Length = 150 Score = 113 bits (282), Expect = 1e-23 Identities = 73/152 (48%), Positives = 92/152 (60%), Gaps = 12/152 (7%) Query: 12 LPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASG 71 LPSQ QVIELL GE ARAGYE++DV+++ ++P IT++ADGD L D +A LS S Sbjct: 5 LPSQIQVIELLGGEVARAGYEVEDVIIHTWSQPFWITVLADGDTVLARDIIATLSHSVSA 64 Query: 72 LLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSL-----ADGSSL-TARLG 125 LLD +D Y LEV+S G+ RP T+EKHFRRARGRK EL+ AD S+ R Sbjct: 65 LLDGLDNIVDRYFLEVSSLGMGRPFTSEKHFRRARGRKVELAAVGRIPADRSNWGDVRRH 124 Query: 126 GTDGDQVNVVVAQGKDFAVRQIPLREITKAVV 157 G GD + +D P EI KA+V Sbjct: 125 GDVGDPRRPRLCGMRD------PAIEIMKAIV 150 >tr|D3M5S7|D3M5S7_9ACTO Tax_Id=656024 (rimP)RecName: Full=Ribosome maturation factor rimP;[Frankia symbiont of Datisca glomerata] Length = 221 Score = 111 bits (277), Expect = 4e-23 Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 14/170 (8%) Query: 2 APDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDA 61 +PD + SA + +++ LL + A G++++DV V+ A + + +V D D G+DLDA Sbjct: 24 SPDVRPSSA----RAELVRLLTPQLAARGFDLEDVTVSRAGSRSVVRVVVDRDGGVDLDA 79 Query: 62 VAMLSRLASGLLDTVDT----GDTP----YVLEVTSPGVDRPLTTEKHFRRARGRKAELS 113 VA SR+AS +LD +T GD P YVLEV+SPGVDRPL +H+ RARGR + Sbjct: 80 VAEASRVASAVLDAAETDPAAGDPPLAGPYVLEVSSPGVDRPLVAPRHWHRARGRLVSVR 139 Query: 114 LADGSSLTARLGGTDGDQVNVVVAQGKDFA--VRQIPLREITKAVVQVEF 161 DG L R+ TD +V+ G+ V +I ++ +A VQVEF Sbjct: 140 TRDGRELLGRVRATDEQTAELVLEGGRTAVGEVLRISFADVVRAAVQVEF 189 >tr|D0LBI5|D0LBI5_GORB4 Tax_Id=526226 (rimP)RecName: Full=Ribosome maturation factor rimP;[Gordonia bronchialis] Length = 179 Score = 110 bits (275), Expect = 7e-23 Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 1/153 (0%) Query: 20 ELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLDTVDT- 78 +L++ G++++DVVV ++V D D G DLD +A LS +LD V Sbjct: 10 DLVEKVVTDRGFDLEDVVVRRRDGRDEFSVVVDRDGGSDLDVLAELSTEIGEVLDAVPAL 69 Query: 79 GDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQVNVVVAQ 138 D Y LEVTSPG+DRPLT +H+RRA GR+ + ++ R+G GD V +VV Sbjct: 70 ADAAYTLEVTSPGIDRPLTAPRHWRRALGRRVRIERDGSDAVVGRVGQVSGDDVAIVVNH 129 Query: 139 GKDFAVRQIPLREITKAVVQVEFSPPNRRELEL 171 AV + +T+AVVQVEFS P+ ELE+ Sbjct: 130 KGRLAVETVGFDSVTRAVVQVEFSRPSVAELEM 162 >sp|A4FM36|RIMP_SACEN Tax_Id=405948 (rimP)RecName: Full=Ribosome maturation factor rimP;[Saccharopolyspora erythraea] Length = 185 Score = 108 bits (269), Expect = 4e-22 Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 9/154 (5%) Query: 29 AGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLDT---VDTGDTPYVL 85 AG++++++ V A R + +V D ++G+ LD ++ +SR S +LD V G Y L Sbjct: 24 AGFDLEELDVQQAGRRRLVKVVVDAEEGVGLDEISEISRAVSKVLDAHEHVLAGS--YTL 81 Query: 86 EVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQVNVVVAQGKDFAVR 145 EVTSPGVDRPLT +H+RRAR R + LADGS L R+G D + V VV+A G+ +R Sbjct: 82 EVTSPGVDRPLTRPRHWRRARYRLVRVRLADGSDLVVRVGEADDEGV-VVLADGE---IR 137 Query: 146 QIPLREITKAVVQVEFSPPNRRELELAEQTGKGA 179 + R++ +AVV+VEF P +L E+ GA Sbjct: 138 TLAYRDVERAVVEVEFQQPPAEDLVRLERAADGA 171 >tr|C7QDY6|C7QDY6_CATAD Tax_Id=479433 (rimP)RecName: Full=Ribosome maturation factor rimP;[Catenulispora acidiphila] Length = 203 Score = 107 bits (268), Expect = 5e-22 Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 10/164 (6%) Query: 21 LLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLDTVD--- 77 LL+ A AGY+++ V V+ R R+ +V DGD G+ LDAV+ ++R+ S +LD + Sbjct: 16 LLEPVVAAAGYDLESVRVSQVARRRRVEVVVDGDDGVSLDAVSDITRVVSDVLDAPEGVA 75 Query: 78 -TGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQVNVVV 136 G+ PYVLEV SPG DRPLT KH+RRA+GR L +G +T R+ +D + V + V Sbjct: 76 VMGEQPYVLEVGSPGTDRPLTLPKHWRRAKGRLVRALLRNGGDVTGRVLDSDDEGVLLEV 135 Query: 137 AQGK--DFAVRQIPLREITKAVVQVEFSPPNRRELELAEQTGKG 178 K R++ E+ KA V++EF NR++ E E T G Sbjct: 136 PGKKKGQTEERRLEYSEVAKARVEIEF---NRKDAE-PEDTADG 175 >tr|C1YQY3|C1YQY3_NOCDA Tax_Id=446468 (rimP)RecName: Full=Ribosome maturation factor rimP;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 160 Score = 107 bits (268), Expect = 5e-22 Identities = 64/148 (43%), Positives = 91/148 (61%), Gaps = 5/148 (3%) Query: 15 QKQVIELLDGEFARAGYEIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLD 74 ++++ ELL+ A AG +++ V + A + + +V D D G+DLD V +S+ + LLD Sbjct: 7 EERIAELLEPVLAEAGLDLEAVELTPAGKRRVLRVVVDSDNGVDLDTVGEVSQEVNTLLD 66 Query: 75 TVDT-GDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQVN 133 + D G PYVLEVTSPGVDRPLT +H+RR+RGR SLA+G +T R+ G D D V Sbjct: 67 SSDVMGAQPYVLEVTSPGVDRPLTQPRHWRRSRGRLVIASLAEGGKVTGRVTGADDDGVT 126 Query: 134 VVVAQGKDFAVRQIPLREITKAVVQVEF 161 + V +G+ R E+ K VQVEF Sbjct: 127 LDV-EGQP---RTFTHAELGKGRVQVEF 150 >tr|D1XED8|D1XED8_9ACTO Tax_Id=647653 (rimP)RecName: Full=Ribosome maturation factor rimP;[Streptomyces sp. ACTE] Length = 165 Score = 107 bits (267), Expect = 6e-22 Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 3/142 (2%) Query: 32 EIDDVVVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLDTVDT-GDTPYVLEVTSP 90 +++++ V+ A R + ++ D D G++LD A LSR S LD D G+ YVLEV+SP Sbjct: 23 DLEEIEVSRAGRRRVLRVIVDSDDGVELDTCAELSRTISETLDATDAMGEGEYVLEVSSP 82 Query: 91 GVDRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQVNVVV--AQGKDFAVRQIP 148 G DRPLT +H+ RA GR A+L+LADG L AR+ G D + +++ V +G+ R++ Sbjct: 83 GADRPLTEHRHYVRATGRLAKLNLADGGELVARILGVDDEGLDLEVPGVKGRKPTARRVA 142 Query: 149 LREITKAVVQVEFSPPNRRELE 170 EI KA V++EF+ +++E E Sbjct: 143 FDEIAKARVEIEFNRKDKKEEE 164 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.315 0.134 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,483,926,189 Number of extensions: 58319383 Number of successful extensions: 130607 Number of sequences better than 10.0: 1837 Number of HSP's gapped: 132608 Number of HSP's successfully gapped: 1837 Length of query: 181 Length of database: 4,236,830,644 Length adjustment: 129 Effective length of query: 52 Effective length of database: 2,623,316,188 Effective search space: 136412441776 Effective search space used: 136412441776 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 76 (33.9 bits)