BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2625 (343 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QVM4|A0QVM4_MYCS2 Tax_Id=246196 (nusA)SubName: Full=Transcr... 640 0.0 tr|Q1BA96|Q1BA96_MYCSS Tax_Id=164756 SubName: Full=NusA antiterm... 604 e-171 tr|A3PY73|A3PY73_MYCSJ Tax_Id=164757 SubName: Full=NusA antiterm... 604 e-171 tr|A1UER6|A1UER6_MYCSK Tax_Id=189918 SubName: Full=NusA antiterm... 604 e-171 tr|A4TCF2|A4TCF2_MYCGI Tax_Id=350054 SubName: Full=NusA antiterm... 603 e-170 tr|A1T7H6|A1T7H6_MYCVP Tax_Id=350058 SubName: Full=NusA antiterm... 598 e-169 tr|Q73VV2|Q73VV2_MYCPA Tax_Id=1770 (nusA)SubName: Full=NusA;[Myc... 577 e-163 tr|A0QIY4|A0QIY4_MYCA1 Tax_Id=243243 (nusA)SubName: Full=Transcr... 577 e-163 sp|Q9Z5J1|NUSA_MYCLE Tax_Id=1769 (nusA)RecName: Full=Transcripti... 575 e-162 tr|B8ZRT6|B8ZRT6_MYCLB Tax_Id=561304 (nusA)SubName: Full=Probabl... 575 e-162 tr|D5PJD7|D5PJD7_9MYCO Tax_Id=525368 (nusA)SubName: Full=Transcr... 574 e-162 tr|B2HKS0|B2HKS0_MYCMM Tax_Id=216594 (nusA)SubName: Full=N utili... 572 e-161 sp|P0A5M2|NUSA_MYCTU Tax_Id=1773 (nusA)RecName: Full=Transcripti... 570 e-160 sp|P0A5M3|NUSA_MYCBO Tax_Id=1765 (nusA)RecName: Full=Transcripti... 570 e-160 tr|C6DX00|C6DX00_MYCTK Tax_Id=478434 SubName: Full=N utilization... 570 e-160 tr|C1AFV5|C1AFV5_MYCBT Tax_Id=561275 (nusA)SubName: Full=Transcr... 570 e-160 tr|A5WR94|A5WR94_MYCTF Tax_Id=336982 SubName: Full=N utilization... 570 e-160 tr|A5U6J3|A5U6J3_MYCTA Tax_Id=419947 (nusA)SubName: Full=Transcr... 570 e-160 tr|A1KMI4|A1KMI4_MYCBP Tax_Id=410289 (nusA)SubName: Full=Probabl... 570 e-160 tr|D6G2C0|D6G2C0_MYCTU Tax_Id=478435 SubName: Full=N utilization... 570 e-160 tr|D6FNQ1|D6FNQ1_MYCTU Tax_Id=611304 SubName: Full=N utilization... 570 e-160 tr|D5Z724|D5Z724_MYCTU Tax_Id=537209 SubName: Full=N utilization... 570 e-160 tr|D5YVC3|D5YVC3_MYCTU Tax_Id=515616 SubName: Full=Transcription... 570 e-160 tr|D5YIE4|D5YIE4_MYCTU Tax_Id=520140 SubName: Full=Transcription... 570 e-160 tr|D5Y6S9|D5Y6S9_MYCTU Tax_Id=520141 SubName: Full=Transcription... 570 e-160 tr|A4KKB0|A4KKB0_MYCTU Tax_Id=395095 SubName: Full=N utilization... 570 e-160 tr|A2VLH4|A2VLH4_MYCTU Tax_Id=348776 SubName: Full=N utilization... 570 e-160 tr|D6FK71|D6FK71_MYCTU Tax_Id=611303 SubName: Full=N utilization... 568 e-160 tr|D6F7W6|D6F7W6_MYCTU Tax_Id=611302 SubName: Full=Transcription... 568 e-160 tr|A0PQC2|A0PQC2_MYCUA Tax_Id=362242 (nusA)SubName: Full=N utili... 567 e-160 tr|B1MD91|B1MD91_MYCA9 Tax_Id=561007 SubName: Full=Transcription... 561 e-158 tr|D5PMS5|D5PMS5_COREQ Tax_Id=525370 (nusA)SubName: Full=Transcr... 540 e-151 tr|Q5YSC4|Q5YSC4_NOCFA Tax_Id=37329 (nusA)SubName: Full=Putative... 539 e-151 tr|C0ZYA3|C0ZYA3_RHOE4 Tax_Id=234621 (nusA)SubName: Full=Transcr... 534 e-150 tr|C3JM53|C3JM53_RHOER Tax_Id=596309 (nusA)SubName: Full=Transcr... 534 e-150 tr|Q0S221|Q0S221_RHOSR Tax_Id=101510 (nusA)SubName: Full=Transcr... 533 e-149 tr|C1B311|C1B311_RHOOB Tax_Id=632772 (nusA)SubName: Full=Transcr... 533 e-149 tr|D0LBI6|D0LBI6_GORB4 Tax_Id=526226 SubName: Full=Transcription... 514 e-144 tr|A4FM35|A4FM35_SACEN Tax_Id=405948 (nusA)SubName: Full=Putativ... 507 e-141 tr|D5UM51|D5UM51_TSUPA Tax_Id=521096 SubName: Full=NusA antiterm... 503 e-140 tr|C7MQU9|C7MQU9_SACVD Tax_Id=471857 SubName: Full=Transcription... 498 e-139 tr|C6WDK9|C6WDK9_ACTMD Tax_Id=446462 SubName: Full=NusA antiterm... 493 e-137 tr|C8XJB6|C8XJB6_NAKMY Tax_Id=479431 SubName: Full=NusA antiterm... 478 e-133 tr|A0LV29|A0LV29_ACIC1 Tax_Id=351607 SubName: Full=NusA antiterm... 434 e-120 tr|D1SBL8|D1SBL8_9ACTO Tax_Id=644283 SubName: Full=NusA antiterm... 431 e-119 >tr|A0QVM4|A0QVM4_MYCS2 Tax_Id=246196 (nusA)SubName: Full=Transcription termination factor NusA;[Mycobacterium smegmatis] Length = 343 Score = 640 bits (1651), Expect = 0.0 Identities = 330/330 (100%), Positives = 330/330 (100%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR Sbjct: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ Sbjct: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT Sbjct: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAPV 330 LAIGKEGQNARLAARLTGWRIDIRSDAAPV Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAPV 330 >tr|Q1BA96|Q1BA96_MYCSS Tax_Id=164756 SubName: Full=NusA antitermination factor;[Mycobacterium sp.] Length = 347 Score = 604 bits (1558), Expect = e-171 Identities = 308/329 (93%), Positives = 321/329 (97%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIEADKGISVDVVV+TIKSALLTAYRHT+GH+ DARIDIDRK+G VKV+AR Sbjct: 1 MNIDMAALHAIEADKGISVDVVVDTIKSALLTAYRHTEGHQADARIDIDRKSGAVKVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TDADGN++ EWDDTPEGFGRIAATTARQVILQRLRDAENEK YGEF+A EGDIVAGVIQ Sbjct: 61 ETDADGNLIQEWDDTPEGFGRIAATTARQVILQRLRDAENEKNYGEFSAREGDIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARGLVVVRMGSETKG+EGVIPAAEQVPGERYEHGDR+RCYVVGVTRGAREPLIT Sbjct: 121 RDARANARGLVVVRMGSETKGNEGVIPAAEQVPGERYEHGDRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEI DGSV+IVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEINDGSVDIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDE RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEQTRAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 >tr|A3PY73|A3PY73_MYCSJ Tax_Id=164757 SubName: Full=NusA antitermination factor;[Mycobacterium sp.] Length = 347 Score = 604 bits (1558), Expect = e-171 Identities = 308/329 (93%), Positives = 321/329 (97%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIEADKGISVDVVV+TIKSALLTAYRHT+GH+ DARIDIDRK+G VKV+AR Sbjct: 1 MNIDMAALHAIEADKGISVDVVVDTIKSALLTAYRHTEGHQADARIDIDRKSGAVKVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TDADGN++ EWDDTPEGFGRIAATTARQVILQRLRDAENEK YGEF+A EGDIVAGVIQ Sbjct: 61 ETDADGNLIQEWDDTPEGFGRIAATTARQVILQRLRDAENEKNYGEFSAREGDIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARGLVVVRMGSETKG+EGVIPAAEQVPGERYEHGDR+RCYVVGVTRGAREPLIT Sbjct: 121 RDARANARGLVVVRMGSETKGNEGVIPAAEQVPGERYEHGDRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEI DGSV+IVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEINDGSVDIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDE RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEQTRAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 >tr|A1UER6|A1UER6_MYCSK Tax_Id=189918 SubName: Full=NusA antitermination factor;[Mycobacterium sp.] Length = 347 Score = 604 bits (1558), Expect = e-171 Identities = 308/329 (93%), Positives = 321/329 (97%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIEADKGISVDVVV+TIKSALLTAYRHT+GH+ DARIDIDRK+G VKV+AR Sbjct: 1 MNIDMAALHAIEADKGISVDVVVDTIKSALLTAYRHTEGHQADARIDIDRKSGAVKVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TDADGN++ EWDDTPEGFGRIAATTARQVILQRLRDAENEK YGEF+A EGDIVAGVIQ Sbjct: 61 ETDADGNLIQEWDDTPEGFGRIAATTARQVILQRLRDAENEKNYGEFSAREGDIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARGLVVVRMGSETKG+EGVIPAAEQVPGERYEHGDR+RCYVVGVTRGAREPLIT Sbjct: 121 RDARANARGLVVVRMGSETKGNEGVIPAAEQVPGERYEHGDRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEI DGSV+IVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEINDGSVDIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDE RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEQTRAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 >tr|A4TCF2|A4TCF2_MYCGI Tax_Id=350054 SubName: Full=NusA antitermination factor;[Mycobacterium gilvum] Length = 353 Score = 603 bits (1554), Expect = e-170 Identities = 310/328 (94%), Positives = 317/328 (96%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIEADKGI+VDVVVETIKSALLTAYRHT+GHE DA IDIDRKTGVVKV+AR Sbjct: 1 MNIDMAALHAIEADKGITVDVVVETIKSALLTAYRHTEGHEADAHIDIDRKTGVVKVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 QTD DGNVL EWDDTPEGFGRIAATTARQVILQRLRDAENEK YGEF+A EGDIVAGVIQ Sbjct: 61 QTDEDGNVLHEWDDTPEGFGRIAATTARQVILQRLRDAENEKNYGEFSAREGDIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDR+RCYVVGV RGAREP+IT Sbjct: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRLRCYVVGVARGAREPVIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV SR PGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVTSRAPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSV+VIDEA RAARVIVPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVTVIDEAARAARVIVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAA 328 LAIGKEGQNARLAARLTGWRIDIRSD A Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDDA 328 >tr|A1T7H6|A1T7H6_MYCVP Tax_Id=350058 SubName: Full=NusA antitermination factor;[Mycobacterium vanbaalenii] Length = 333 Score = 598 bits (1541), Expect = e-169 Identities = 308/324 (95%), Positives = 314/324 (96%) Query: 5 MAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIARQTDA 64 MAALHAIEADKGISVDVVV+TIKSALLTAYRHT+GHE DA IDIDRKTG VKVIARQTD Sbjct: 1 MAALHAIEADKGISVDVVVDTIKSALLTAYRHTEGHEADAHIDIDRKTGAVKVIARQTDE 60 Query: 65 DGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQRDAR 124 DGNVL EWDDTPEGFGRIAATTARQVILQRLRDAENEK YGEF+A EGDIVAGVIQRDAR Sbjct: 61 DGNVLHEWDDTPEGFGRIAATTARQVILQRLRDAENEKNYGEFSAREGDIVAGVIQRDAR 120 Query: 125 ANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLITLSRT 184 ANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDR+RCYVVGVTRGAREPLITLSRT Sbjct: 121 ANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRLRCYVVGVTRGAREPLITLSRT 180 Query: 185 HPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMGQRVR 244 HPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVA+R PGLNAKGACIGPMGQRVR Sbjct: 181 HPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVATRAPGLNAKGACIGPMGQRVR 240 Query: 245 NVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLSLAIG 304 NVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSV+VIDEA RAARVIVPDFQLSLAIG Sbjct: 241 NVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVTVIDEAARAARVIVPDFQLSLAIG 300 Query: 305 KEGQNARLAARLTGWRIDIRSDAA 328 KEGQNARLAARLTGWRIDIRSD A Sbjct: 301 KEGQNARLAARLTGWRIDIRSDDA 324 >tr|Q73VV2|Q73VV2_MYCPA Tax_Id=1770 (nusA)SubName: Full=NusA;[Mycobacterium paratuberculosis] Length = 351 Score = 577 bits (1488), Expect = e-163 Identities = 289/327 (88%), Positives = 313/327 (95%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT+GH+ DARI+IDRKTGVVKVIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTEGHQNDARIEIDRKTGVVKVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD DGNV++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEDGNVISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVRMG+ETK SEGVIPAAEQVPGE YEHG+RVRCYV+GVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRMGTETKASEGVIPAAEQVPGESYEHGNRVRCYVIGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S +PGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVKSNLPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVS+ID+A RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSIIDQAARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDA 327 LAIGKEGQNARLAARLTGWRIDIR D+ Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDS 327 >tr|A0QIY4|A0QIY4_MYCA1 Tax_Id=243243 (nusA)SubName: Full=Transcription termination factor NusA;[Mycobacterium avium] Length = 351 Score = 577 bits (1488), Expect = e-163 Identities = 289/327 (88%), Positives = 313/327 (95%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT+GH+ DARI+IDRKTGVVKVIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTEGHQNDARIEIDRKTGVVKVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD DGNV++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEDGNVISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVRMG+ETK SEGVIPAAEQVPGE YEHG+RVRCYV+GVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRMGTETKASEGVIPAAEQVPGESYEHGNRVRCYVIGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S +PGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVKSNLPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVS+ID+A RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSIIDQAARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDA 327 LAIGKEGQNARLAARLTGWRIDIR D+ Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDS 327 >sp|Q9Z5J1|NUSA_MYCLE Tax_Id=1769 (nusA)RecName: Full=Transcription elongation protein nusA;[Mycobacterium leprae] Length = 347 Score = 575 bits (1483), Expect = e-162 Identities = 291/329 (88%), Positives = 312/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ +++TI+SALLTAYRHT GH+ DARIDIDRKTGVVKVIAR Sbjct: 1 MNIDMAALHAIEMDRGISVNELLDTIRSALLTAYRHTQGHQIDARIDIDRKTGVVKVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 + D DGNV++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 EVDDDGNVISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVRMGSETK SEGVIPAAEQV GE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRMGSETKASEGVIPAAEQVLGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIV+VAREAGHRSKIAVASRVPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVSVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR D+ P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDSPP 329 >tr|B8ZRT6|B8ZRT6_MYCLB Tax_Id=561304 (nusA)SubName: Full=Probable transcription termination/antitermination factor;[Mycobacterium leprae] Length = 347 Score = 575 bits (1483), Expect = e-162 Identities = 291/329 (88%), Positives = 312/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ +++TI+SALLTAYRHT GH+ DARIDIDRKTGVVKVIAR Sbjct: 1 MNIDMAALHAIEMDRGISVNELLDTIRSALLTAYRHTQGHQIDARIDIDRKTGVVKVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 + D DGNV++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 EVDDDGNVISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVRMGSETK SEGVIPAAEQV GE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRMGSETKASEGVIPAAEQVLGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIV+VAREAGHRSKIAVASRVPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVSVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR D+ P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDSPP 329 >tr|D5PJD7|D5PJD7_9MYCO Tax_Id=525368 (nusA)SubName: Full=Transcription elongation factor NusA;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 351 Score = 574 bits (1479), Expect = e-162 Identities = 288/326 (88%), Positives = 310/326 (95%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT+GH+ DARI+IDRKTGVVKV+AR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTEGHQNDARIEIDRKTGVVKVVAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD DGNV++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDDDGNVISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVRMG+ETK SEGVIPAAEQVPGE YEHG+RVRCYV+GVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRMGTETKASEGVIPAAEQVPGESYEHGNRVRCYVIGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S VPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVKSNVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDP+RFVANALSPAKVVSVS+ID RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPSRFVANALSPAKVVSVSIIDPNARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSD 326 LAIGKEGQNARLAARLTGWRIDIR D Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGD 326 >tr|B2HKS0|B2HKS0_MYCMM Tax_Id=216594 (nusA)SubName: Full=N utilization substance protein a NusA;[Mycobacterium marinum] Length = 347 Score = 572 bits (1474), Expect = e-161 Identities = 287/327 (87%), Positives = 311/327 (95%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+V+AR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD DGNV++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDDDGNVISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVRMGSETK SEGVIP+AEQVPGE YEHG+R+RCYVVGV+RG+REPLIT Sbjct: 121 RDSRANARGLVVVRMGSETKASEGVIPSAEQVPGESYEHGNRLRCYVVGVSRGSREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S VPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDA 327 LAIGKEGQNARLAARLTGWRIDIR D+ Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDS 327 >sp|P0A5M2|NUSA_MYCTU Tax_Id=1773 (nusA)RecName: Full=Transcription elongation protein nusA;[Mycobacterium tuberculosis] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >sp|P0A5M3|NUSA_MYCBO Tax_Id=1765 (nusA)RecName: Full=Transcription elongation protein nusA;[Mycobacterium bovis] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|C6DX00|C6DX00_MYCTK Tax_Id=478434 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|C1AFV5|C1AFV5_MYCBT Tax_Id=561275 (nusA)SubName: Full=Transcription elongation factor;[Mycobacterium bovis] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|A5WR94|A5WR94_MYCTF Tax_Id=336982 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|A5U6J3|A5U6J3_MYCTA Tax_Id=419947 (nusA)SubName: Full=Transcription elongation factor NusA;[Mycobacterium tuberculosis] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|A1KMI4|A1KMI4_MYCBP Tax_Id=410289 (nusA)SubName: Full=Probable N utilization substance protein A nusA;[Mycobacterium bovis] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|D6G2C0|D6G2C0_MYCTU Tax_Id=478435 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis KZN 605] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|D6FNQ1|D6FNQ1_MYCTU Tax_Id=611304 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis K85] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|D5Z724|D5Z724_MYCTU Tax_Id=537209 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis GM 1503] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|D5YVC3|D5YVC3_MYCTU Tax_Id=515616 SubName: Full=Transcription elongation factor NusA;[Mycobacterium tuberculosis 02_1987] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|D5YIE4|D5YIE4_MYCTU Tax_Id=520140 SubName: Full=Transcription elongation factor NusA;[Mycobacterium tuberculosis EAS054] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|D5Y6S9|D5Y6S9_MYCTU Tax_Id=520141 SubName: Full=Transcription elongation factor NusA;[Mycobacterium tuberculosis T85] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|A4KKB0|A4KKB0_MYCTU Tax_Id=395095 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis str. Haarlem] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|A2VLH4|A2VLH4_MYCTU Tax_Id=348776 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis C] Length = 347 Score = 570 bits (1468), Expect = e-160 Identities = 287/329 (87%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|D6FK71|D6FK71_MYCTU Tax_Id=611303 SubName: Full=N utilization substance protein A nusA;[Mycobacterium tuberculosis CPHL_A] Length = 347 Score = 568 bits (1465), Expect = e-160 Identities = 286/329 (86%), Positives = 310/329 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPAAEQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGK+GQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKDGQNARLAARLTGWRIDIRGDAPP 329 >tr|D6F7W6|D6F7W6_MYCTU Tax_Id=611302 SubName: Full=Transcription termination factor NusA;[Mycobacterium tuberculosis T46] Length = 347 Score = 568 bits (1464), Expect = e-160 Identities = 286/329 (86%), Positives = 309/329 (93%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+VIAR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD GN+++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVR+G+ETK SEGVIPA EQVPGE YEHG+R+RCYVVGVTRGAREPLIT Sbjct: 121 RDSRANARGLVVVRIGTETKASEGVIPATEQVPGESYEHGNRLRCYVVGVTRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD+DPARFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIR DA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRGDAPP 329 >tr|A0PQC2|A0PQC2_MYCUA Tax_Id=362242 (nusA)SubName: Full=N utilization substance protein a NusA;[Mycobacterium ulcerans] Length = 347 Score = 567 bits (1462), Expect = e-160 Identities = 285/327 (87%), Positives = 309/327 (94%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAALHAIE D+GISV+ ++ETIKSALLTAYRHT GH+ DARI+IDRKTGVV+V+AR Sbjct: 1 MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD DGNV++EWDDTPEGFGRIAATTARQV+LQR RDAENE+ YGEF+ EG+IVAGVIQ Sbjct: 61 ETDDDGNVISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RD+RANARGLVVVRMGSETK SEGVIP+AEQVPGE YEHG+R+RCYVVGV+RG+REPLIT Sbjct: 121 RDSRANARGLVVVRMGSETKASEGVIPSAEQVPGESYEHGNRLRCYVVGVSRGSREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV S VPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYDEDP RFVANALSPAKVVSVSVID+ RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDEDPGRFVANALSPAKVVSVSVIDQTARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDA 327 LAIGKEGQNARLAARLTGW IDIR D+ Sbjct: 301 LAIGKEGQNARLAARLTGWWIDIRGDS 327 >tr|B1MD91|B1MD91_MYCA9 Tax_Id=561007 SubName: Full=Transcription elongation protein NusA;[Mycobacterium abscessus] Length = 331 Score = 561 bits (1445), Expect = e-158 Identities = 284/329 (86%), Positives = 307/329 (93%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID AA++ + ADKGI+VD ++ IKSALLTAYRHTDGHEP+ARI+IDRKTGVV+V+AR Sbjct: 1 MNIDPAAVNLMAADKGITVDEAIDIIKSALLTAYRHTDGHEPNARIEIDRKTGVVRVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD DGN++ EWD TPEGFGRIAATTARQV Q +RDAENE +GEF+ EG+IV GVIQ Sbjct: 61 ETDQDGNLITEWDATPEGFGRIAATTARQVFQQGVRDAENEHKFGEFSTREGEIVGGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARGLVVVRMGSETKGSEGVIP+AEQVPGE Y HGDR+RCYVVGV+RGAREPLIT Sbjct: 121 RDARANARGLVVVRMGSETKGSEGVIPSAEQVPGEEYHHGDRLRCYVVGVSRGAREPLIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEI+DGSVEIVAVAREAGHRSKIAVAS+V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEISDGSVEIVAVAREAGHRSKIAVASKVSGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSELSGEKIDIIDYD DPARFVANALSPAKVVSVSVIDEAG+AARVIVPDFQLS Sbjct: 241 QRVRNVMSELSGEKIDIIDYDPDPARFVANALSPAKVVSVSVIDEAGKAARVIVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDADP 329 >tr|D5PMS5|D5PMS5_COREQ Tax_Id=525370 (nusA)SubName: Full=Transcription termination factor NusA;[Rhodococcus equi ATCC 33707] Length = 343 Score = 540 bits (1391), Expect = e-151 Identities = 269/330 (81%), Positives = 301/330 (91%), Gaps = 1/330 (0%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID+AAL AIEADKGIS ++ I++ALLTAYRHT+GH+P ARID+D K+GVV+V+AR Sbjct: 1 MNIDIAALRAIEADKGISAGTIIAAIETALLTAYRHTEGHQPHARIDVDTKSGVVRVMAR 60 Query: 61 QTDADGNVLAE-WDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVI 119 D+DGN + E WDDTPEGFGRIAATTARQVILQRLRDAE+E+ +GEFA HEG+IV GVI Sbjct: 61 DVDSDGNQVGEEWDDTPEGFGRIAATTARQVILQRLRDAEHERSFGEFATHEGEIVGGVI 120 Query: 120 QRDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLI 179 QRD RANARG+VVVR+GSE G+EG+IP AEQVPGE YEHGDR++CYVVGV+RG R P I Sbjct: 121 QRDTRANARGMVVVRIGSEANGAEGLIPPAEQVPGETYEHGDRIKCYVVGVSRGQRGPQI 180 Query: 180 TLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPM 239 TLSRTHPNLVRKLF+LEVPEIADGSVEIVAVARE+GHRSKIAV SRVPGLNAKGACIGPM Sbjct: 181 TLSRTHPNLVRKLFALEVPEIADGSVEIVAVARESGHRSKIAVHSRVPGLNAKGACIGPM 240 Query: 240 GQRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQL 299 GQRVRNVMSEL+GEKIDIIDYDEDPA+FV NALSP+KVVSV+V+D RAARV+VPDFQL Sbjct: 241 GQRVRNVMSELAGEKIDIIDYDEDPAKFVGNALSPSKVVSVTVVDPEARAARVVVPDFQL 300 Query: 300 SLAIGKEGQNARLAARLTGWRIDIRSDAAP 329 SLAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 SLAIGKEGQNARLAARLTGWRIDIRSDAAP 330 >tr|Q5YSC4|Q5YSC4_NOCFA Tax_Id=37329 (nusA)SubName: Full=Putative transcriptional termination/antitermination factor;[Nocardia farcinica] Length = 342 Score = 539 bits (1388), Expect = e-151 Identities = 264/329 (80%), Positives = 302/329 (91%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNI++ AL AI ADKGIS++ V+ I+SALLTAYRHT+GH+P+AR+DI+++TG V+V+AR Sbjct: 1 MNIEIEALRAIVADKGISIETVISAIESALLTAYRHTEGHQPNARVDINQRTGAVRVMAR 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 + DADGNV++EWDDTPEGFGRIAATTARQV+LQRLRDAENEK +GEF+ HEGDIV GV+Q Sbjct: 61 ELDADGNVISEWDDTPEGFGRIAATTARQVVLQRLRDAENEKSFGEFSTHEGDIVGGVVQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARG VVVR+GSE G+EG+IP AEQVPGE YEHGDR++CYVVGV+RG R P IT Sbjct: 121 RDARANARGTVVVRIGSELHGTEGLIPPAEQVPGETYEHGDRIKCYVVGVSRGPRGPQIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVR+LF+LEVPEIADGSVEIVAVAREAGHRSKIAV S VPG+NAKGACIGPMG Sbjct: 181 LSRTHPNLVRRLFALEVPEIADGSVEIVAVAREAGHRSKIAVRSTVPGVNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSEL+GEKIDIIDY +DPA FV NALSP+KVVSV+++D RAARV+VPDFQLS Sbjct: 241 QRVRNVMSELAGEKIDIIDYADDPATFVGNALSPSKVVSVTIVDPDARAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 >tr|C0ZYA3|C0ZYA3_RHOE4 Tax_Id=234621 (nusA)SubName: Full=Transcription elongation protein NusA;[Rhodococcus erythropolis] Length = 343 Score = 534 bits (1375), Expect = e-150 Identities = 265/331 (80%), Positives = 304/331 (91%), Gaps = 1/331 (0%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID+AAL AIEA+KG+S++ V+ TI++ALLTAYRHT+GH+ +ARID++ KTG V+V+A Sbjct: 1 MNIDIAALRAIEAEKGVSIETVIATIQTALLTAYRHTEGHKQNARIDVNIKTGSVRVMAH 60 Query: 61 QTDADGNVLAE-WDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVI 119 TDADGN++ E WDDTPEGFGRIAATTARQVILQRLRDAE+E+ +GEF+ HEG+IV GVI Sbjct: 61 DTDADGNMIGEEWDDTPEGFGRIAATTARQVILQRLRDAEHERSFGEFSTHEGEIVGGVI 120 Query: 120 QRDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLI 179 QRD RAN+RG+VVVR+GSE+ G+EG++P AEQVPGE YEHG+R++CYVVGV RGAR P I Sbjct: 121 QRDTRANSRGMVVVRIGSESNGAEGLLPPAEQVPGENYEHGERIKCYVVGVARGARGPQI 180 Query: 180 TLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPM 239 TLSRTHPNLVRKLF+LEVPEIADGSVEI+ VAREAGHRSKIAVASRV GLNAKGACIGPM Sbjct: 181 TLSRTHPNLVRKLFALEVPEIADGSVEIINVAREAGHRSKIAVASRVQGLNAKGACIGPM 240 Query: 240 GQRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQL 299 GQRVRNVMSEL+GEKIDIID+DEDPA FV NALSP+KVVSV+V+D RAARVIVPDFQL Sbjct: 241 GQRVRNVMSELAGEKIDIIDFDEDPATFVGNALSPSKVVSVTVVDPEARAARVIVPDFQL 300 Query: 300 SLAIGKEGQNARLAARLTGWRIDIRSDAAPV 330 SLAIGKEGQNARLAARLTGWRIDIRSDAAPV Sbjct: 301 SLAIGKEGQNARLAARLTGWRIDIRSDAAPV 331 >tr|C3JM53|C3JM53_RHOER Tax_Id=596309 (nusA)SubName: Full=Transcription termination factor NusA;[Rhodococcus erythropolis SK121] Length = 343 Score = 534 bits (1375), Expect = e-150 Identities = 265/331 (80%), Positives = 304/331 (91%), Gaps = 1/331 (0%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID+AAL AIEA+KG+S++ V+ TI++ALLTAYRHT+GH+ +ARID++ KTG V+V+A Sbjct: 1 MNIDIAALRAIEAEKGVSIETVIATIQTALLTAYRHTEGHKQNARIDVNIKTGSVRVMAH 60 Query: 61 QTDADGNVLAE-WDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVI 119 TDADGN++ E WDDTPEGFGRIAATTARQVILQRLRDAE+E+ +GEF+ HEG+IV GVI Sbjct: 61 DTDADGNMIGEEWDDTPEGFGRIAATTARQVILQRLRDAEHERSFGEFSTHEGEIVGGVI 120 Query: 120 QRDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLI 179 QRD RAN+RG+VVVR+GSE+ G+EG++P AEQVPGE YEHG+R++CYVVGV RGAR P I Sbjct: 121 QRDTRANSRGMVVVRIGSESNGAEGLLPPAEQVPGENYEHGERIKCYVVGVARGARGPQI 180 Query: 180 TLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPM 239 TLSRTHPNLVRKLF+LEVPEIADGSVEI+ VAREAGHRSKIAVASRV GLNAKGACIGPM Sbjct: 181 TLSRTHPNLVRKLFALEVPEIADGSVEIINVAREAGHRSKIAVASRVQGLNAKGACIGPM 240 Query: 240 GQRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQL 299 GQRVRNVMSEL+GEKIDIID+DEDPA FV NALSP+KVVSV+V+D RAARVIVPDFQL Sbjct: 241 GQRVRNVMSELAGEKIDIIDFDEDPATFVGNALSPSKVVSVTVVDPEARAARVIVPDFQL 300 Query: 300 SLAIGKEGQNARLAARLTGWRIDIRSDAAPV 330 SLAIGKEGQNARLAARLTGWRIDIRSDAAPV Sbjct: 301 SLAIGKEGQNARLAARLTGWRIDIRSDAAPV 331 >tr|Q0S221|Q0S221_RHOSR Tax_Id=101510 (nusA)SubName: Full=Transcription elongation protein NusA;[Rhodococcus sp.] Length = 343 Score = 533 bits (1374), Expect = e-149 Identities = 264/330 (80%), Positives = 301/330 (91%), Gaps = 1/330 (0%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID+AAL AIEADKGIS++ V+ TI++ALLTAYRHT+GH+ ARID+D K+G+V+V+A Sbjct: 1 MNIDIAALRAIEADKGISIETVISTIQTALLTAYRHTEGHQQHARIDVDTKSGIVRVMAH 60 Query: 61 QTDADGNVLAE-WDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVI 119 DADGN++ E WDDTPEGFGRIAATTARQVILQRLRDAE+E+ +GE++ HEG+IV GVI Sbjct: 61 DVDADGNMVGEEWDDTPEGFGRIAATTARQVILQRLRDAEHERSFGEYSTHEGEIVGGVI 120 Query: 120 QRDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLI 179 QRD RAN+RG+VVVR+GSE G+EG+IP AEQVPGE YEHG+R++CYVVGV RG R P I Sbjct: 121 QRDTRANSRGMVVVRIGSEASGAEGLIPPAEQVPGENYEHGERLKCYVVGVARGQRGPQI 180 Query: 180 TLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPM 239 TLSRTHPNLVRKLF+LEVPEIADGSVEI+AVAREAGHRSKIAV SRV GLNAKGACIGPM Sbjct: 181 TLSRTHPNLVRKLFALEVPEIADGSVEIIAVAREAGHRSKIAVQSRVQGLNAKGACIGPM 240 Query: 240 GQRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQL 299 GQRVRNVMSEL+GEKIDIID+DEDPARFV NALSP+KVVSV+V+D RAARV+VPDFQL Sbjct: 241 GQRVRNVMSELAGEKIDIIDFDEDPARFVGNALSPSKVVSVTVVDPDARAARVVVPDFQL 300 Query: 300 SLAIGKEGQNARLAARLTGWRIDIRSDAAP 329 SLAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 SLAIGKEGQNARLAARLTGWRIDIRSDAAP 330 >tr|C1B311|C1B311_RHOOB Tax_Id=632772 (nusA)SubName: Full=Transcription elongation protein NusA;[Rhodococcus opacus] Length = 343 Score = 533 bits (1372), Expect = e-149 Identities = 263/330 (79%), Positives = 301/330 (91%), Gaps = 1/330 (0%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID+AAL AIEADKGIS++ V+ TI++ALLTAYRHT+GH+ ARID+D K+G+V+V+A Sbjct: 1 MNIDIAALRAIEADKGISIETVISTIQTALLTAYRHTEGHQQHARIDVDTKSGIVRVMAH 60 Query: 61 QTDADGNVLAE-WDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVI 119 D+DGN++ E WDDTPEGFGRIAATTARQVILQRLRDAE+E+ +GE++ HEG+IV GVI Sbjct: 61 DVDSDGNMVGEEWDDTPEGFGRIAATTARQVILQRLRDAEHERSFGEYSTHEGEIVGGVI 120 Query: 120 QRDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLI 179 QRD RAN+RG+VVVR+GSE G+EG+IP AEQVPGE YEHG+R++CYVVGV RG R P I Sbjct: 121 QRDTRANSRGMVVVRIGSEASGAEGLIPPAEQVPGENYEHGERLKCYVVGVARGQRGPQI 180 Query: 180 TLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPM 239 TLSRTHPNLVRKLF+LEVPEIADGSVEI+AVAREAGHRSKIAV SRV GLNAKGACIGPM Sbjct: 181 TLSRTHPNLVRKLFALEVPEIADGSVEIIAVAREAGHRSKIAVQSRVQGLNAKGACIGPM 240 Query: 240 GQRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQL 299 GQRVRNVMSEL+GEKIDIID+DEDPARFV NALSP+KVVSV+V+D RAARV+VPDFQL Sbjct: 241 GQRVRNVMSELAGEKIDIIDFDEDPARFVGNALSPSKVVSVTVVDPEARAARVVVPDFQL 300 Query: 300 SLAIGKEGQNARLAARLTGWRIDIRSDAAP 329 SLAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 SLAIGKEGQNARLAARLTGWRIDIRSDAAP 330 >tr|D0LBI6|D0LBI6_GORB4 Tax_Id=526226 SubName: Full=Transcription termination factor NusA;[Gordonia bronchialis] Length = 340 Score = 514 bits (1323), Expect = e-144 Identities = 255/329 (77%), Positives = 292/329 (88%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID+ AL IEADKGIS+D V+ I++ALLTAYRHT+G P ARID++RKTG V+V+A+ Sbjct: 1 MNIDINALRMIEADKGISIDTVITAIETALLTAYRHTEGFAPHARIDVNRKTGAVRVMAQ 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 + D +G+V+ EWDDTPEGFGRIAATTARQVILQRLRDAENEK +G+ HEG+IV GV+Q Sbjct: 61 ELDDNGDVVHEWDDTPEGFGRIAATTARQVILQRLRDAENEKNFGDLVTHEGEIVGGVVQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 +DARANARG++VV++GS+ +EG+IP AEQVPGE Y HGDR++CYVVGV+RGAR P IT Sbjct: 121 QDARANARGMIVVQIGSDANSTEGIIPPAEQVPGESYTHGDRIKCYVVGVSRGARGPQIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLFSLEVPEI DGSVEIVAVAREAGHRSKIAV + V GLNAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFSLEVPEIEDGSVEIVAVAREAGHRSKIAVHTGVAGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMSEL+GEKIDIID+D DPA FV NALSPAKVVSVSV+D +AARV+VPD+QLS Sbjct: 241 QRVRNVMSELAGEKIDIIDFDTDPAVFVGNALSPAKVVSVSVVDPTAKAARVVVPDYQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDADP 329 >tr|A4FM35|A4FM35_SACEN Tax_Id=405948 (nusA)SubName: Full=Putative transcriptional termination/antitermination factor;[Saccharopolyspora erythraea] Length = 352 Score = 507 bits (1305), Expect = e-141 Identities = 254/329 (77%), Positives = 289/329 (87%), Gaps = 4/329 (1%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MN+D+AAL AIE+DKGI + V+E I+SALLTAYRHT+GH+P AR+++DRKTGVV+VIA Sbjct: 1 MNVDIAALRAIESDKGIPFETVLEAIESALLTAYRHTEGHQPHARVEVDRKTGVVRVIAH 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 ADG V EWDDTPEGFGRIAATTARQVILQRLRDAE+E+ +GEF+ EG+I+ GVIQ Sbjct: 61 TLGADGTVAEEWDDTPEGFGRIAATTARQVILQRLRDAEHERTFGEFSTKEGEILGGVIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDA+AN+RG+V+V++G SEGVIPAAEQVPGERYEHG R++CYVVGV+R AR P IT Sbjct: 121 RDAKANSRGMVIVQVGD----SEGVIPAAEQVPGERYEHGMRIKCYVVGVSRSARGPQIT 176 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVR+LF+LEVPEIADG+VEI AVAREAGHRSKIAV S V G+NAKGACIGPMG Sbjct: 177 LSRTHPNLVRRLFALEVPEIADGTVEIPAVAREAGHRSKIAVRSTVGGVNAKGACIGPMG 236 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 RVRNVMSEL GEKIDIIDY +DPA FV NALSPAKVVSV V+DE + ARV+VPDFQLS Sbjct: 237 ARVRNVMSELGGEKIDIIDYSDDPATFVGNALSPAKVVSVEVVDERAKTARVVVPDFQLS 296 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDA P Sbjct: 297 LAIGKEGQNARLAARLTGWRIDIRSDADP 325 >tr|D5UM51|D5UM51_TSUPA Tax_Id=521096 SubName: Full=NusA antitermination factor;[Tsukamurella paurometabola DSM 20162] Length = 333 Score = 503 bits (1296), Expect = e-140 Identities = 247/329 (75%), Positives = 291/329 (88%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMA L AIEA+K ISV+ V+E I+ ALLTAY+HT+GHEP ARID++R+TG VKV+A+ Sbjct: 1 MNIDMATLRAIEAEKDISVETVIEAIQVALLTAYKHTEGHEPHARIDVNRRTGEVKVLAQ 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 + DADGN++ EWDDTPEGFGRIAA +ARQ+I QRLRDAEN++ +GEFA +EG++V+GV+Q Sbjct: 61 ELDADGNIITEWDDTPEGFGRIAADSARQLITQRLRDAENDRTFGEFAVYEGEVVSGVVQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 DARA ARG VVVR+GSE +G EG++P AEQVPGE YEHGDR++ YVVGV+RG R IT Sbjct: 121 ADARAAARGFVVVRIGSEREGHEGLLPPAEQVPGENYEHGDRMKFYVVGVSRGQRGTQIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLV+KLF+LEVPEIADGSVEI +VAREAGHRSKIAV + VPGLNAKGACIGPMG Sbjct: 181 LSRTHPNLVKKLFALEVPEIADGSVEITSVAREAGHRSKIAVRTSVPGLNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVRNVMS+L GEKIDII YD+DPA FV NALSP+ VVSV+++D +AARV+VPDF+LS Sbjct: 241 QRVRNVMSDLDGEKIDIIAYDDDPAVFVGNALSPSSVVSVTIVDPKEKAARVVVPDFKLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDA P Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDADP 329 >tr|C7MQU9|C7MQU9_SACVD Tax_Id=471857 SubName: Full=Transcription termination factor NusA;[Saccharomonospora viridis] Length = 348 Score = 498 bits (1281), Expect = e-139 Identities = 254/329 (77%), Positives = 287/329 (87%), Gaps = 4/329 (1%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MN+D+AAL AIEADK I + V+E I+SALLTAY+HT+G +P ARIDIDRKTG V+VIA Sbjct: 1 MNVDIAALRAIEADKDIPFETVLEAIESALLTAYKHTEGRQPHARIDIDRKTGYVRVIAY 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 D +G V+ EWDDTPEGFGRIAA TARQVILQRLRDAE+EK YGEF+A EG+IVAGV+Q Sbjct: 61 TLDENGEVVEEWDDTPEGFGRIAAATARQVILQRLRDAEHEKTYGEFSAQEGEIVAGVVQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDA+ANARG+V+V++G +EGV+P AEQVPGE YEHG R++ YVVGV+R AR P IT Sbjct: 121 RDAKANARGMVIVQVGD----TEGVLPPAEQVPGEVYEHGARLKAYVVGVSRTARGPQIT 176 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLF+LEVPEIADG+VEI AVAREAGHRSKIAV S VPG+NAKGACIG +G Sbjct: 177 LSRTHPNLVRKLFALEVPEIADGTVEITAVAREAGHRSKIAVRSTVPGVNAKGACIGHVG 236 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 RVRNVMSEL GEKIDIID+ +DPARFV NALSPAKVVSV V+DE + ARVIVPDFQLS Sbjct: 237 ARVRNVMSELGGEKIDIIDHSDDPARFVGNALSPAKVVSVDVVDERTKTARVIVPDFQLS 296 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 297 LAIGKEGQNARLAARLTGWRIDIRSDAAP 325 >tr|C6WDK9|C6WDK9_ACTMD Tax_Id=446462 SubName: Full=NusA antitermination factor;[Actinosynnema mirum] Length = 337 Score = 493 bits (1269), Expect = e-137 Identities = 246/330 (74%), Positives = 286/330 (86%), Gaps = 4/330 (1%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MN+D+AAL AIE DK I D V+E I++ALLTAY+HTDGH P +R++IDRK+G V+V+A+ Sbjct: 1 MNVDIAALRAIERDKDIPFDTVLEAIETALLTAYKHTDGHHPHSRVEIDRKSGAVRVLAQ 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 DG V EWDDTPEGFGRIAATTARQVILQRLRDAE+E+ +GEF+A EG+I+ GV+Q Sbjct: 61 DLGPDGVVTEEWDDTPEGFGRIAATTARQVILQRLRDAEHERTFGEFSAKEGEIIGGVVQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 RDARANARG+VVV++G +EGV+P AEQVPGE Y+HG R++CYVVGV+R AR P IT Sbjct: 121 RDARANARGMVVVQVGD----TEGVLPPAEQVPGEEYKHGARIKCYVVGVSRSARGPQIT 176 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVR+LF+LEVPEIADG+VEI AVAREAGHRSKIAV + VPG+NAKGACIGPMG Sbjct: 177 LSRTHPNLVRRLFALEVPEIADGTVEIPAVAREAGHRSKIAVRTSVPGVNAKGACIGPMG 236 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 RVRNVMSEL+GEKIDIID+ +DPA FV NALSPAKVVSV V+DE + ARV+VPDFQLS Sbjct: 237 ARVRNVMSELAGEKIDIIDHSDDPATFVGNALSPAKVVSVRVLDERAKTARVVVPDFQLS 296 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAPV 330 LAIGKEGQNARLAARLTGWRIDIRSDA V Sbjct: 297 LAIGKEGQNARLAARLTGWRIDIRSDAEAV 326 >tr|C8XJB6|C8XJB6_NAKMY Tax_Id=479431 SubName: Full=NusA antitermination factor;[Nakamurella multipartita] Length = 336 Score = 478 bits (1229), Expect = e-133 Identities = 236/329 (71%), Positives = 273/329 (82%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MN+D+AAL A+E +KGI + +++T+++ALLTAYRHT GH AR+ IDRKTG ++V A+ Sbjct: 1 MNVDIAALRAVEKEKGIDFNSLIDTLETALLTAYRHTQGHAGHARVQIDRKTGGIRVWAQ 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TD G ++ EWDDTPE FGRIAATTARQVILQRLRD +NE+ +G+FA E D++ G I Sbjct: 61 ETDDSGEIVREWDDTPEDFGRIAATTARQVILQRLRDVDNERTFGDFAGREHDLITGTIS 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 DA+ NARG+VVV +G EG+IPAAEQVPGE Y HG R+RCYVV V RG R P IT Sbjct: 121 ADAKVNARGVVVVSLGEGKNAVEGIIPAAEQVPGESYPHGQRLRCYVVSVARGLRGPQIT 180 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHPNLVRKLF+LEVPEIADGSVEI AVAREAGHRSKIAV V G+NAKGACIGPMG Sbjct: 181 LSRTHPNLVRKLFALEVPEIADGSVEITAVAREAGHRSKIAVRPAVAGVNAKGACIGPMG 240 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 RVR VMSEL+GEKIDIIDYDEDPA FV NALSPA+ +S +VID +AARV+VPDFQLS Sbjct: 241 ARVRAVMSELNGEKIDIIDYDEDPATFVGNALSPARALSTTVIDPVAKAARVVVPDFQLS 300 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 LAIGKEGQNARLAARLTGWRIDIRSDAAP Sbjct: 301 LAIGKEGQNARLAARLTGWRIDIRSDAAP 329 >tr|A0LV29|A0LV29_ACIC1 Tax_Id=351607 SubName: Full=NusA antitermination factor;[Acidothermus cellulolyticus] Length = 348 Score = 434 bits (1117), Expect = e-120 Identities = 221/326 (67%), Positives = 267/326 (81%), Gaps = 7/326 (2%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNIDMAAL ++E +K IS D++V+ I++ALLTAY+ T+G P AR+ +DRKTG V V+A Sbjct: 1 MNIDMAALRSLEREKDISFDLLVQAIETALLTAYQRTEGAYPRARVVLDRKTGEVTVLAA 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 +TDA+GNV+ E+D TP+ F RIAA TA+QVILQRLRDAE+E +GE+A EGD+V G+IQ Sbjct: 61 ETDAEGNVIREFDHTPQDFNRIAAMTAKQVILQRLRDAEHELTFGEYAGREGDVVGGIIQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 + + V V +G EGV+P EQVPGERY HG+R+RCYV+ V +G R P IT Sbjct: 121 QQHDSRN---VYVNLGKV----EGVLPVTEQVPGERYVHGERIRCYVLSVHKGIRGPQIT 173 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSRTHP LVRKLF+LEVPEIADGSVEIVA+AREAGHR+KIAV S+VPGLNAKGACIGP+G Sbjct: 174 LSRTHPGLVRKLFALEVPEIADGSVEIVALAREAGHRTKIAVRSKVPGLNAKGACIGPLG 233 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVR VM+EL GEKIDIIDY +DPA FVANALSPA+V SV ++D ++ARVIVPD+QLS Sbjct: 234 QRVRAVMAELHGEKIDIIDYSDDPATFVANALSPARVTSVEIVDPVTKSARVIVPDYQLS 293 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSD 326 LAIG+EGQNARLAARLTGWRIDIR D Sbjct: 294 LAIGREGQNARLAARLTGWRIDIRPD 319 >tr|D1SBL8|D1SBL8_9ACTO Tax_Id=644283 SubName: Full=NusA antitermination factor;[Micromonospora aurantiaca ATCC 27029] Length = 347 Score = 431 bits (1109), Expect = e-119 Identities = 218/327 (66%), Positives = 259/327 (79%), Gaps = 4/327 (1%) Query: 1 MNIDMAALHAIEADKGISVDVVVETIKSALLTAYRHTDGHEPDARIDIDRKTGVVKVIAR 60 MNID+AAL A+E ++ I D ++ I++ALLTAYRHTDG EP AR++IDRK+G V A+ Sbjct: 1 MNIDLAALRALEREREIPFDTILAAIETALLTAYRHTDGAEPHARVEIDRKSGAASVYAQ 60 Query: 61 QTDADGNVLAEWDDTPEGFGRIAATTARQVILQRLRDAENEKVYGEFAAHEGDIVAGVIQ 120 + DADG V EWDDTP FGRIAA TA+QVILQRLR+A +E +GE+ +GD+V GV+Q Sbjct: 61 ELDADGTVTREWDDTPHDFGRIAAMTAKQVILQRLREATDEVHFGEYVGRDGDLVTGVVQ 120 Query: 121 RDARANARGLVVVRMGSETKGSEGVIPAAEQVPGERYEHGDRVRCYVVGVTRGAREPLIT 180 +G+V V +G EGV+P +EQVPGERYEHG+R+RC VV V +G R P IT Sbjct: 121 AHETRREKGIVSVDLGK----LEGVLPQSEQVPGERYEHGERIRCVVVHVAKGMRGPQIT 176 Query: 181 LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVASRVPGLNAKGACIGPMG 240 LSR+HP LV+KLF+LEVPEIADG+VEI A+AREAGHR+KIAV S G+NAKGACIGPMG Sbjct: 177 LSRSHPALVKKLFALEVPEIADGTVEIGAIAREAGHRTKIAVRSTTSGVNAKGACIGPMG 236 Query: 241 QRVRNVMSELSGEKIDIIDYDEDPARFVANALSPAKVVSVSVIDEAGRAARVIVPDFQLS 300 QRVR VMSEL GEKIDIID+ +DPA FV NALSPAK + V V+D A R ARV VPDFQLS Sbjct: 237 QRVRAVMSELHGEKIDIIDWSDDPATFVGNALSPAKALRVEVVDLASRTARVTVPDFQLS 296 Query: 301 LAIGKEGQNARLAARLTGWRIDIRSDA 327 LAIG+EGQNARLAARLTGWRIDIRSDA Sbjct: 297 LAIGREGQNARLAARLTGWRIDIRSDA 323 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.318 0.134 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,543,124,509 Number of extensions: 104342974 Number of successful extensions: 297871 Number of sequences better than 10.0: 2197 Number of HSP's gapped: 294436 Number of HSP's successfully gapped: 2214 Length of query: 343 Length of database: 4,236,830,644 Length adjustment: 139 Effective length of query: 204 Effective length of database: 2,498,237,548 Effective search space: 509640459792 Effective search space used: 509640459792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 81 (35.8 bits)