BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2629 (156 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0QVM8|RBFA_MYCS2 Tax_Id=246196 (rbfA)RecName: Full=Ribosome-... 199 9e-50 sp|Q1BA93|RBFA_MYCSS Tax_Id=164756 (rbfA)RecName: Full=Ribosome-... 184 3e-45 sp|A1UER9|RBFA_MYCSK Tax_Id=189918 (rbfA)RecName: Full=Ribosome-... 184 3e-45 sp|A3PY76|RBFA_MYCSJ Tax_Id=164757 (rbfA)RecName: Full=Ribosome-... 184 3e-45 sp|A1T7H9|RBFA_MYCVP Tax_Id=350058 (rbfA)RecName: Full=Ribosome-... 177 4e-43 sp|A4TCF7|RBFA_MYCGI Tax_Id=350054 (rbfA)RecName: Full=Ribosome-... 176 1e-42 sp|B2HKS3|RBFA_MYCMM Tax_Id=216594 (rbfA)RecName: Full=Ribosome-... 156 7e-37 sp|A0PQC5|RBFA_MYCUA Tax_Id=362242 (rbfA)RecName: Full=Ribosome-... 155 2e-36 tr|D0LBI8|D0LBI8_GORB4 Tax_Id=526226 (rbfA)RecName: Full=Ribosom... 154 3e-36 sp|C1B315|RBFA_RHOOB Tax_Id=632772 (rbfA)RecName: Full=Ribosome-... 149 8e-35 tr|D5PJE1|D5PJE1_9MYCO Tax_Id=525368 (rbfA)SubName: Full=Ribosom... 149 8e-35 sp|Q0S217|RBFA_RHOSR Tax_Id=101510 (rbfA)RecName: Full=Ribosome-... 149 1e-34 sp|B1MD86|RBFA_MYCA9 Tax_Id=561007 (rbfA)RecName: Full=Ribosome-... 149 1e-34 tr|D5PMS1|D5PMS1_COREQ Tax_Id=525370 (rbfA)SubName: Full=Ribosom... 149 1e-34 sp|Q73VV5|RBFA_MYCPA Tax_Id=1770 (rbfA)RecName: Full=Ribosome-bi... 148 2e-34 sp|A0QIY1|RBFA_MYCA1 Tax_Id=243243 (rbfA)RecName: Full=Ribosome-... 148 2e-34 sp|P65964|RBFA_MYCTU Tax_Id=1773 (rbfA)RecName: Full=Ribosome-bi... 146 9e-34 sp|A5U6J0|RBFA_MYCTA Tax_Id=419947 (rbfA)RecName: Full=Ribosome-... 146 9e-34 sp|C1AFV2|RBFA_MYCBT Tax_Id=561275 (rbfA)RecName: Full=Ribosome-... 146 9e-34 sp|A1KMI1|RBFA_MYCBP Tax_Id=410289 (rbfA)RecName: Full=Ribosome-... 146 9e-34 sp|P65965|RBFA_MYCBO Tax_Id=1765 (rbfA)RecName: Full=Ribosome-bi... 146 9e-34 tr|C6DX03|C6DX03_MYCTK Tax_Id=478434 (rbfA)RecName: Full=Ribosom... 146 9e-34 tr|A5WR91|A5WR91_MYCTF Tax_Id=336982 (rbfA)RecName: Full=Ribosom... 146 9e-34 tr|D6G2C3|D6G2C3_MYCTU Tax_Id=478435 SubName: Full=Ribosome-bind... 146 9e-34 tr|D6FNP8|D6FNP8_MYCTU Tax_Id=611304 SubName: Full=Ribosome-bind... 146 9e-34 tr|D6FK68|D6FK68_MYCTU Tax_Id=611303 SubName: Full=Translation i... 146 9e-34 tr|D6F7W3|D6F7W3_MYCTU Tax_Id=611302 SubName: Full=Ribosome-bind... 146 9e-34 tr|D5Z721|D5Z721_MYCTU Tax_Id=537209 SubName: Full=Ribosome-bind... 146 9e-34 tr|D5YIE0|D5YIE0_MYCTU Tax_Id=520140 SubName: Full=Ribosome-bind... 146 9e-34 tr|D5XXH4|D5XXH4_MYCTU Tax_Id=515617 SubName: Full=Ribosome-bind... 146 9e-34 tr|A4KKA8|A4KKA8_MYCTU Tax_Id=395095 (rbfA)RecName: Full=Ribosom... 146 9e-34 tr|A2VLH1|A2VLH1_MYCTU Tax_Id=348776 (rbfA)RecName: Full=Ribosom... 146 9e-34 sp|Q5YSC8|RBFA_NOCFA Tax_Id=37329 (rbfA)RecName: Full=Ribosome-b... 145 2e-33 sp|C0ZYA7|RBFA_RHOE4 Tax_Id=234621 (rbfA)RecName: Full=Ribosome-... 141 2e-32 tr|C3JK65|C3JK65_RHOER Tax_Id=596309 (rbfA)RecName: Full=Ribosom... 141 2e-32 sp|Q9Z5I8|RBFA_MYCLE Tax_Id=1769 (rbfA)RecName: Full=Ribosome-bi... 140 4e-32 sp|B8ZRT3|RBFA_MYCLB Tax_Id=561304 (rbfA)RecName: Full=Ribosome-... 140 4e-32 tr|D5UM55|D5UM55_TSUPA Tax_Id=521096 SubName: Full=Ribosome-bind... 140 4e-32 tr|C7MQV3|C7MQV3_SACVD Tax_Id=471857 (rbfA)RecName: Full=Ribosom... 139 9e-32 tr|C6WDK6|C6WDK6_ACTMD Tax_Id=446462 (rbfA)RecName: Full=Ribosom... 137 3e-31 sp|A4FM32|RBFA_SACEN Tax_Id=405948 (rbfA)RecName: Full=Ribosome-... 130 7e-29 tr|C0XSE7|C0XSE7_9CORY Tax_Id=525263 (rbfA)RecName: Full=Ribosom... 122 1e-26 sp|B1VGC3|RBFA_CORU7 Tax_Id=504474 (rbfA)RecName: Full=Ribosome-... 118 2e-25 tr|C8NTZ8|C8NTZ8_9CORY Tax_Id=585529 (rbfA)RecName: Full=Ribosom... 117 3e-25 tr|C8RTP7|C8RTP7_CORJE Tax_Id=525262 (rbfA)RecName: Full=Ribosom... 117 5e-25 >sp|A0QVM8|RBFA_MYCS2 Tax_Id=246196 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium smegmatis] Length = 156 Score = 199 bits (506), Expect = 9e-50 Identities = 106/144 (73%), Positives = 106/144 (73%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD Sbjct: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 EDPDY RTKVGAGTGVRFTPTLAFVRDTVPD Sbjct: 61 EDPDYEGAAAALEKAKGVLRTKVGAGTGVRFTPTLAFVRDTVPDAAHRMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAKHAGDPDPYRVGGA Sbjct: 121 EDLARVREGAKHAGDPDPYRVGGA 144 >sp|Q1BA93|RBFA_MYCSS Tax_Id=164756 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium sp.] Length = 171 Score = 184 bits (467), Expect = 3e-45 Identities = 98/143 (68%), Positives = 101/143 (70%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITD+KV+ DLHDATLYYTVLG SLD Sbjct: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDSKVTNDLHDATLYYTVLGRSLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 E+PDY RTKVGAGTGVRFTPTLAFVRDTVPD Sbjct: 61 EEPDYAGAAAALEKAKGVLRTKVGAGTGVRFTPTLAFVRDTVPDTAHRMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGG 143 GAKHAGD DPYRV G Sbjct: 121 EDLARVREGAKHAGDADPYRVSG 143 >sp|A1UER9|RBFA_MYCSK Tax_Id=189918 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium sp.] Length = 171 Score = 184 bits (467), Expect = 3e-45 Identities = 98/143 (68%), Positives = 101/143 (70%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITD+KV+ DLHDATLYYTVLG SLD Sbjct: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDSKVTNDLHDATLYYTVLGRSLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 E+PDY RTKVGAGTGVRFTPTLAFVRDTVPD Sbjct: 61 EEPDYAGAAAALEKAKGVLRTKVGAGTGVRFTPTLAFVRDTVPDTAHRMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGG 143 GAKHAGD DPYRV G Sbjct: 121 EDLARVREGAKHAGDADPYRVSG 143 >sp|A3PY76|RBFA_MYCSJ Tax_Id=164757 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium sp.] Length = 171 Score = 184 bits (467), Expect = 3e-45 Identities = 98/143 (68%), Positives = 101/143 (70%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITD+KV+ DLHDATLYYTVLG SLD Sbjct: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDSKVTNDLHDATLYYTVLGRSLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 E+PDY RTKVGAGTGVRFTPTLAFVRDTVPD Sbjct: 61 EEPDYAGAAAALEKAKGVLRTKVGAGTGVRFTPTLAFVRDTVPDTAHRMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGG 143 GAKHAGD DPYRV G Sbjct: 121 EDLARVREGAKHAGDADPYRVSG 143 >sp|A1T7H9|RBFA_MYCVP Tax_Id=350058 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium vanbaalenii] Length = 163 Score = 177 bits (449), Expect = 4e-43 Identities = 95/144 (65%), Positives = 99/144 (68%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKV+ DLHDATLYYTVLG SLD Sbjct: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVTNDLHDATLYYTVLGRSLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 E+PDY RTKVGA GVRFTPTLAF RDTVPD Sbjct: 61 EEPDYEGAAAGLEKAKGVLRTKVGASLGVRFTPTLAFARDTVPDTAHRMEALLAKARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GA+HAG+ DPYRV GA Sbjct: 121 EDLARVRQGARHAGEADPYRVTGA 144 >sp|A4TCF7|RBFA_MYCGI Tax_Id=350054 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium gilvum] Length = 168 Score = 176 bits (445), Expect = 1e-42 Identities = 95/143 (66%), Positives = 97/143 (67%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKV+ DLHDATLYYTVLG SLD Sbjct: 1 MPDPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVTNDLHDATLYYTVLGRSLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 E+PDY RTKVGA GVRFTPTLAF RDTVPD Sbjct: 61 EEPDYEGAAAGLEKAKGVLRTKVGASLGVRFTPTLAFARDTVPDAAHRMEALLAQARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGG 143 GAKHAGD DPYRV G Sbjct: 121 EDLARVREGAKHAGDSDPYRVLG 143 >sp|B2HKS3|RBFA_MYCMM Tax_Id=216594 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium marinum] Length = 175 Score = 156 bits (395), Expect = 7e-37 Identities = 83/144 (57%), Positives = 93/144 (64%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARA+RLAKRI+TIVASAIEYEIKDP L GVTITDAKV+ DLHDAT+YYTV+G +LD Sbjct: 1 MADPARARRLAKRITTIVASAIEYEIKDPGLVGVTITDAKVTADLHDATVYYTVMGPTLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++PDY RTKVGAGTGVRFTPTL F RD D Sbjct: 61 DEPDYAAAAAALERAKGVLRTKVGAGTGVRFTPTLTFTRDVTSDTVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDRGS 144 >sp|A0PQC5|RBFA_MYCUA Tax_Id=362242 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium ulcerans] Length = 175 Score = 155 bits (391), Expect = 2e-36 Identities = 83/144 (57%), Positives = 92/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARA+RLAKRI+TIVASAIEYEIKDP L GVTITDAKV+ DLHDAT+YYTV+G +LD Sbjct: 1 MADPARARRLAKRITTIVASAIEYEIKDPGLVGVTITDAKVTADLHDATVYYTVMGPTLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PDY RTKVGAGTGVRFTPTL F RD D Sbjct: 61 GEPDYAAAAAALERAKGVLRTKVGAGTGVRFTPTLTFTRDVTSDTVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDRGS 144 >tr|D0LBI8|D0LBI8_GORB4 Tax_Id=526226 (rbfA)RecName: Full=Ribosome-binding factor A; Flags: Precursor;[Gordonia bronchialis] Length = 151 Score = 154 bits (390), Expect = 3e-36 Identities = 83/140 (59%), Positives = 94/140 (67%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARA+RLAKRIS+IVA+AI +EIKDPRLA VTITDAKV+GDLHDATLYYTV+G SLD Sbjct: 1 MADPARAQRLAKRISSIVATAIAHEIKDPRLAYVTITDAKVTGDLHDATLYYTVMGESLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PD+ R+KVGAGTGVRFTPTL FV DTVPD Sbjct: 61 TEPDFEAAAAGLAKATGVLRSKVGAGTGVRFTPTLRFVLDTVPDAARQMEELVARARASD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 A+ AG+PDPYR Sbjct: 121 ELVARQARDAQPAGEPDPYR 140 >sp|C1B315|RBFA_RHOOB Tax_Id=632772 (rbfA)RecName: Full=Ribosome-binding factor A;[Rhodococcus opacus] Length = 162 Score = 149 bits (377), Expect = 8e-35 Identities = 78/140 (55%), Positives = 90/140 (64%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARA++LAKRI TIVA+AI++EIKDPRLA VTITD KV+ DLHDAT+YYTV+GA L+ Sbjct: 1 MVDPARARKLAKRIGTIVATAIDHEIKDPRLAFVTITDTKVTADLHDATVYYTVMGADLE 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PD R+KVGAGTGVRFTPTL FV DTVPD Sbjct: 61 SEPDLVSAAAGLEKAKGVLRSKVGAGTGVRFTPTLTFVADTVPDTARHMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 GA AGDPDPY+ Sbjct: 121 DEVARVAAGASPAGDPDPYK 140 >tr|D5PJE1|D5PJE1_9MYCO Tax_Id=525368 (rbfA)SubName: Full=Ribosome-binding factor A;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 157 Score = 149 bits (377), Expect = 8e-35 Identities = 79/144 (54%), Positives = 90/144 (62%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARA+RLAKRI+TIVASAIE+EIKDP L GVTI D KV+ DLHDAT++YTV+G +LD Sbjct: 1 MPDPARARRLAKRINTIVASAIEFEIKDPGLDGVTIVDTKVTADLHDATVFYTVMGRTLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++PDY RT VGAGTGVRFTPTL F RDT D Sbjct: 61 DEPDYAAAAAALDRAKGALRTMVGAGTGVRFTPTLTFTRDTTLDTVQRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AGD DPYR G+ Sbjct: 121 ADLARVRSGAKPAGDADPYRASGS 144 >sp|Q0S217|RBFA_RHOSR Tax_Id=101510 (rbfA)RecName: Full=Ribosome-binding factor A;[Rhodococcus sp.] Length = 162 Score = 149 bits (376), Expect = 1e-34 Identities = 77/140 (55%), Positives = 90/140 (64%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARA++LAKRI TIVA+AI++EIKDPRLA VT+TD KV+ DLHDAT+YYTV+GA L+ Sbjct: 1 MVDPARARKLAKRIGTIVATAIDHEIKDPRLAFVTVTDTKVTADLHDATVYYTVMGADLE 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PD R+KVGAGTGVRFTPTL FV DTVPD Sbjct: 61 SEPDLAAAAAGLEKAKGVLRSKVGAGTGVRFTPTLTFVADTVPDTARHMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 GA AGDPDPY+ Sbjct: 121 DEVARVAAGASPAGDPDPYK 140 >sp|B1MD86|RBFA_MYCA9 Tax_Id=561007 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium abscessus] Length = 158 Score = 149 bits (376), Expect = 1e-34 Identities = 78/144 (54%), Positives = 90/144 (62%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARA+RLAKRI IVASAIEYEIKDPRL VT+TD +V+ DLHDAT+YYTV+G +L Sbjct: 1 MADPARARRLAKRIGAIVASAIEYEIKDPRLTMVTVTDTRVTNDLHDATVYYTVMGQTLS 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++PD+ RTKVGAGTGVRFTPTL FV DT+ D Sbjct: 61 DEPDFAGAAAALDKAKGVLRTKVGAGTGVRFTPTLTFVLDTMADSARHMEELLDRTRAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GA HAGD DPY+ A Sbjct: 121 AALAEVRQGAVHAGDADPYKESAA 144 >tr|D5PMS1|D5PMS1_COREQ Tax_Id=525370 (rbfA)SubName: Full=Ribosome-binding factor A;[Rhodococcus equi ATCC 33707] Length = 154 Score = 149 bits (375), Expect = 1e-34 Identities = 79/140 (56%), Positives = 91/140 (65%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARA+RLAKRISTIVA+AI++EIKDPRLA VTITDAKV+ DLHDAT+YYTV+G ++D Sbjct: 1 MADPARARRLAKRISTIVATAIDHEIKDPRLAFVTITDAKVTADLHDATVYYTVMGENID 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PD R+KVGAGTGVRFTPTL FV DTVPD Sbjct: 61 TEPDLAGAAAGLEKAKGVLRSKVGAGTGVRFTPTLTFVADTVPDTARHMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 A AGD DPY+ Sbjct: 121 DAVARARENASPAGDADPYK 140 >sp|Q73VV5|RBFA_MYCPA Tax_Id=1770 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium paratuberculosis] Length = 162 Score = 148 bits (373), Expect = 2e-34 Identities = 78/144 (54%), Positives = 90/144 (62%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARA+RLAKRI+TIVASAIE+EIKDP L GVTI D KV+ DLHDAT++YTV+G +LD Sbjct: 1 MPDPARARRLAKRINTIVASAIEFEIKDPGLDGVTIVDTKVTADLHDATVFYTVMGRTLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++PDY RT VGAGTGVRFTPTL F RDT D Sbjct: 61 DEPDYGAAAAALERAKGALRTMVGAGTGVRFTPTLTFTRDTTSDSVARMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRSGAKPAGEADPYRESGS 144 >sp|A0QIY1|RBFA_MYCA1 Tax_Id=243243 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium avium] Length = 162 Score = 148 bits (373), Expect = 2e-34 Identities = 78/144 (54%), Positives = 90/144 (62%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARA+RLAKRI+TIVASAIE+EIKDP L GVTI D KV+ DLHDAT++YTV+G +LD Sbjct: 1 MPDPARARRLAKRINTIVASAIEFEIKDPGLDGVTIVDTKVTADLHDATVFYTVMGRTLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++PDY RT VGAGTGVRFTPTL F RDT D Sbjct: 61 DEPDYGAAAAALERAKGALRTMVGAGTGVRFTPTLTFTRDTTSDSVARMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRSGAKPAGEADPYRESGS 144 >sp|P65964|RBFA_MYCTU Tax_Id=1773 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium tuberculosis] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >sp|A5U6J0|RBFA_MYCTA Tax_Id=419947 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium tuberculosis] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >sp|C1AFV2|RBFA_MYCBT Tax_Id=561275 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium bovis] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >sp|A1KMI1|RBFA_MYCBP Tax_Id=410289 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium bovis] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >sp|P65965|RBFA_MYCBO Tax_Id=1765 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium bovis] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|C6DX03|C6DX03_MYCTK Tax_Id=478434 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium tuberculosis] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|A5WR91|A5WR91_MYCTF Tax_Id=336982 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium tuberculosis] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|D6G2C3|D6G2C3_MYCTU Tax_Id=478435 SubName: Full=Ribosome-binding factor A rbfA;[Mycobacterium tuberculosis KZN 605] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|D6FNP8|D6FNP8_MYCTU Tax_Id=611304 SubName: Full=Ribosome-binding factor A rbfA;[Mycobacterium tuberculosis K85] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|D6FK68|D6FK68_MYCTU Tax_Id=611303 SubName: Full=Translation initiation factor IF-2 infB;[Mycobacterium tuberculosis CPHL_A] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|D6F7W3|D6F7W3_MYCTU Tax_Id=611302 SubName: Full=Ribosome-binding factor A rbfA;[Mycobacterium tuberculosis T46] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|D5Z721|D5Z721_MYCTU Tax_Id=537209 SubName: Full=Ribosome-binding factor A rbfA;[Mycobacterium tuberculosis GM 1503] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|D5YIE0|D5YIE0_MYCTU Tax_Id=520140 SubName: Full=Ribosome-binding factor A rbfA;[Mycobacterium tuberculosis EAS054] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|D5XXH4|D5XXH4_MYCTU Tax_Id=515617 SubName: Full=Ribosome-binding factor A rbfA;[Mycobacterium tuberculosis T92] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|A4KKA8|A4KKA8_MYCTU Tax_Id=395095 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium tuberculosis str. Haarlem] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >tr|A2VLH1|A2VLH1_MYCTU Tax_Id=348776 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium tuberculosis C] Length = 183 Score = 146 bits (368), Expect = 9e-34 Identities = 79/144 (54%), Positives = 91/144 (63%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASAIEYEIKDP LAGVTITDAKV+ DLHDAT+YYTV+G +L Sbjct: 1 MADAARARRLAKRIAAIVASAIEYEIKDPGLAGVTITDAKVTADLHDATVYYTVMGRTLH 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++P+ RTKVGAGTGVRFTPTL F DT+ D Sbjct: 61 DEPNCAGAAAALERAKGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 GAK AG+ DPYR G+ Sbjct: 121 ADLARVRVGAKPAGEADPYRDNGS 144 >sp|Q5YSC8|RBFA_NOCFA Tax_Id=37329 (rbfA)RecName: Full=Ribosome-binding factor A;[Nocardia farcinica] Length = 147 Score = 145 bits (365), Expect = 2e-33 Identities = 75/140 (53%), Positives = 91/140 (65%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M D ARA+RLAKRIS IVA+AIEYE+KDPRL VTITDAKV+GDL +AT+YYTV+G ++D Sbjct: 1 MVDQARARRLAKRISEIVATAIEYEVKDPRLRFVTITDAKVTGDLREATVYYTVMGETID 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PDY R+KVGAGTGV+FTP+LAFV D VPD Sbjct: 61 AEPDYDAAAAGLAKAKGVLRSKVGAGTGVKFTPSLAFVLDKVPDAAREMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 A+HAG+PDPY+ Sbjct: 121 AEVARVAAEARHAGEPDPYK 140 >sp|C0ZYA7|RBFA_RHOE4 Tax_Id=234621 (rbfA)RecName: Full=Ribosome-binding factor A;[Rhodococcus erythropolis] Length = 159 Score = 141 bits (356), Expect = 2e-32 Identities = 75/140 (53%), Positives = 87/140 (62%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARA++LAKRI TIVA+AI++EIKDPRLA VTITD KV+ DLHDAT+YYTV+G +D Sbjct: 1 MVDPARARKLAKRIGTIVATAIDHEIKDPRLAFVTITDTKVTNDLHDATVYYTVMGEKVD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 PD R+KVGAGTGVRFTPTL FV DTVPD Sbjct: 61 SAPDVEAAAAGLEKAKGVLRSKVGAGTGVRFTPTLTFVADTVPDTARHMEELLARAKAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 A+ AGD DPY+ Sbjct: 121 DEVAKARENAQPAGDADPYK 140 >tr|C3JK65|C3JK65_RHOER Tax_Id=596309 (rbfA)RecName: Full=Ribosome-binding factor A;[Rhodococcus erythropolis SK121] Length = 159 Score = 141 bits (356), Expect = 2e-32 Identities = 75/140 (53%), Positives = 87/140 (62%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M DPARA++LAKRI TIVA+AI++EIKDPRLA VTITD KV+ DLHDAT+YYTV+G +D Sbjct: 1 MVDPARARKLAKRIGTIVATAIDHEIKDPRLAFVTITDTKVTNDLHDATVYYTVMGEKVD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 PD R+KVGAGTGVRFTPTL FV DTVPD Sbjct: 61 SAPDVEAAAAGLEKAKGVLRSKVGAGTGVRFTPTLTFVADTVPDTARHMEELLARAKAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 A+ AGD DPY+ Sbjct: 121 DEVAKARENAQPAGDADPYK 140 >sp|Q9Z5I8|RBFA_MYCLE Tax_Id=1769 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium leprae] Length = 164 Score = 140 bits (354), Expect = 4e-32 Identities = 76/144 (52%), Positives = 89/144 (61%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI TIVASAIE+EIKDP L GVTI D KV+ DLHDAT++YTV+G +L+ Sbjct: 1 MADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATVFYTVMGRTLE 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 + PDY R+KVGAGTGVRFTPTL F+RDT D Sbjct: 61 DAPDYTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRDTTSDSVARMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 AK AG+ DPYR G+ Sbjct: 121 ADVAQVRLRAKPAGEADPYRDKGS 144 >sp|B8ZRT3|RBFA_MYCLB Tax_Id=561304 (rbfA)RecName: Full=Ribosome-binding factor A;[Mycobacterium leprae] Length = 164 Score = 140 bits (354), Expect = 4e-32 Identities = 76/144 (52%), Positives = 89/144 (61%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI TIVASAIE+EIKDP L GVTI D KV+ DLHDAT++YTV+G +L+ Sbjct: 1 MADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATVFYTVMGRTLE 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 + PDY R+KVGAGTGVRFTPTL F+RDT D Sbjct: 61 DAPDYTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRDTTSDSVARMEELLARARAAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRVGGA 144 AK AG+ DPYR G+ Sbjct: 121 ADVAQVRLRAKPAGEADPYRDKGS 144 >tr|D5UM55|D5UM55_TSUPA Tax_Id=521096 SubName: Full=Ribosome-binding factor A;[Tsukamurella paurometabola DSM 20162] Length = 157 Score = 140 bits (354), Expect = 4e-32 Identities = 74/140 (52%), Positives = 90/140 (64%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MADPARA +LAKRI+TIVA+AIE++IKDPRL VT+TDA+V+ DLHDAT+YYTV+G +LD Sbjct: 1 MADPARAAKLAKRIATIVATAIEHDIKDPRLDFVTVTDARVTNDLHDATVYYTVMGPTLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PDY R+KVGAGTGVRFTPTL F DTVP+ Sbjct: 61 VEPDYESAAAGLEKARGQLRSKVGAGTGVRFTPTLRFEPDTVPEAVATMEALLAKAREQD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 AK AG+ DPY+ Sbjct: 121 ERVAAAAANAKPAGEADPYK 140 >tr|C7MQV3|C7MQV3_SACVD Tax_Id=471857 (rbfA)RecName: Full=Ribosome-binding factor A;[Saccharomonospora viridis] Length = 153 Score = 139 bits (351), Expect = 9e-32 Identities = 75/141 (53%), Positives = 88/141 (62%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVASA+E+EIKDPRL VT+TDA+V+GDL DAT+YYTVLG SLD Sbjct: 1 MADRARARRLAKRIAQIVASALEHEIKDPRLGNVTVTDARVTGDLRDATVYYTVLGDSLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 PD+ R+KVG GTGVR+TPTL FV D +P Sbjct: 61 SPPDFAGAAAALESARGVLRSKVGQGTGVRYTPTLTFVPDQLPQDARHIDELLAKAREAD 120 Query: 121 XXXXXXXXGAKHAGDPDPYRV 141 GAK AGD +PYRV Sbjct: 121 AEVARLATGAKPAGDANPYRV 141 >tr|C6WDK6|C6WDK6_ACTMD Tax_Id=446462 (rbfA)RecName: Full=Ribosome-binding factor A;[Actinosynnema mirum] Length = 149 Score = 137 bits (346), Expect = 3e-31 Identities = 74/140 (52%), Positives = 86/140 (61%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA++LAKRIS IVASA+E+++KDPRLA VTITD KV+GDLHDAT+YYTVLG LD Sbjct: 1 MADQARARKLAKRISQIVASALEHQVKDPRLARVTITDTKVTGDLHDATVYYTVLGEKLD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PD R+ VG TGVRFTPTL FV DTVPD Sbjct: 61 SEPDLAGAAAALEKAKGVLRSMVGQQTGVRFTPTLTFVTDTVPDEARKMDELLAKARELD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 AK AG+ DPY+ Sbjct: 121 AEVARIASDAKPAGEADPYK 140 >sp|A4FM32|RBFA_SACEN Tax_Id=405948 (rbfA)RecName: Full=Ribosome-binding factor A;[Saccharopolyspora erythraea] Length = 166 Score = 130 bits (326), Expect = 7e-29 Identities = 73/141 (51%), Positives = 85/141 (60%), Gaps = 4/141 (2%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA+RLAKRI+ IVAS +EYE+KDPRLA VTITDA+V+ DL DAT+YYTV G Sbjct: 1 MADTARARRLAKRIAQIVASGLEYEVKDPRLAMVTITDARVTPDLRDATVYYTVFG---- 56 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +D D+ R++VG TGVRFTPTL FV DTVPD Sbjct: 57 DDADHASTAAALASATGVLRSRVGQQTGVRFTPTLTFVADTVPDDARRLDELLAQAREAD 116 Query: 121 XXXXXXXXGAKHAGDPDPYRV 141 A+HAGD DPYRV Sbjct: 117 AEVARLASTAEHAGDADPYRV 137 >tr|C0XSE7|C0XSE7_9CORY Tax_Id=525263 (rbfA)RecName: Full=Ribosome-binding factor A;[Corynebacterium lipophiloflavum DSM 44291] Length = 162 Score = 122 bits (306), Expect = 1e-26 Identities = 67/140 (47%), Positives = 83/140 (59%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD +RA+RLAK+I TIVASAIE E+KDPRL VT+TDA+V+GDLHDAT+YYTV G + Sbjct: 19 MADNSRAQRLAKQIQTIVASAIEREVKDPRLELVTVTDARVTGDLHDATVYYTVRGRKIS 78 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++PDY R VG VRFTPT++F DTVP+ Sbjct: 79 DEPDYDQAAEALHRARGQIRKIVGDQLNVRFTPTVSFELDTVPEASARMEELLNRARARD 138 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 GAK AG+ +PYR Sbjct: 139 AELARLREGAKPAGEGNPYR 158 >sp|B1VGC3|RBFA_CORU7 Tax_Id=504474 (rbfA)RecName: Full=Ribosome-binding factor A;[Corynebacterium urealyticum] Length = 143 Score = 118 bits (296), Expect = 2e-25 Identities = 67/140 (47%), Positives = 81/140 (57%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 MAD ARA R+AKRI IVA AIE EIKDPRL VTITD +++GDLHDA+++YTV GAS+D Sbjct: 1 MADNARAARMAKRIQQIVAVAIEREIKDPRLEYVTITDTRMTGDLHDASVFYTVRGASID 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 E+PD R VG VRFTPTL+FV DTVP+ Sbjct: 61 EEPDVPLAAAALESAKGQLRKIVGDQLSVRFTPTLSFVHDTVPEASAHMEKLLAEARAKD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 AK AG+ +PY+ Sbjct: 121 EAVRAQAAQAKPAGEANPYK 140 >tr|C8NTZ8|C8NTZ8_9CORY Tax_Id=585529 (rbfA)RecName: Full=Ribosome-binding factor A;[Corynebacterium genitalium ATCC 33030] Length = 149 Score = 117 bits (294), Expect = 3e-25 Identities = 66/140 (47%), Positives = 79/140 (56%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 +AD RA+RLAKRI TIVASAIE +IKD RL VT+TD +V+GDLHDAT+YYTV G +D Sbjct: 4 VADNTRAQRLAKRIQTIVASAIERQIKDRRLELVTVTDVRVTGDLHDATVYYTVRGEGID 63 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 ++PDY R VG GVRFTPTL F DTVP+ Sbjct: 64 DEPDYDAAAEALTRHKGQLRKIVGEELGVRFTPTLTFELDTVPEASARMEELLARARARD 123 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 A+ AG DPY+ Sbjct: 124 EELAELKKNAQPAGAADPYK 143 >tr|C8RTP7|C8RTP7_CORJE Tax_Id=525262 (rbfA)RecName: Full=Ribosome-binding factor A;[Corynebacterium jeikeium ATCC 43734] Length = 141 Score = 117 bits (293), Expect = 5e-25 Identities = 66/140 (47%), Positives = 80/140 (57%) Query: 1 MADPARAKRLAKRISTIVASAIEYEIKDPRLAGVTITDAKVSGDLHDATLYYTVLGASLD 60 M D ARA R+AKRI IVA+AIE +IKDPRL VTITDA+V+GDLHDAT++YTV G ++D Sbjct: 1 MVDHARAARMAKRIQQIVATAIERQIKDPRLEFVTITDARVTGDLHDATVFYTVRGKTVD 60 Query: 61 EDPDYXXXXXXXXXXXXXXRTKVGAGTGVRFTPTLAFVRDTVPDXXXXXXXXXXXXXXXX 120 +PD R VG VRFTPTL+F DTVP+ Sbjct: 61 AEPDTATAEAALAKATGQLRKIVGDQLSVRFTPTLSFSLDTVPEASAHFEELLARAKAQD 120 Query: 121 XXXXXXXXGAKHAGDPDPYR 140 GA+ AGD DPY+ Sbjct: 121 EALRAQSAGARPAGDEDPYK 140 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.317 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 911,938,479 Number of extensions: 24386591 Number of successful extensions: 44852 Number of sequences better than 10.0: 1359 Number of HSP's gapped: 44711 Number of HSP's successfully gapped: 1359 Length of query: 156 Length of database: 4,236,830,644 Length adjustment: 118 Effective length of query: 38 Effective length of database: 2,760,902,692 Effective search space: 104914302296 Effective search space used: 104914302296 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 75 (33.5 bits)