BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2694 (112 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QVU1|A0QVU1_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 210 5e-53 tr|Q1BA51|Q1BA51_MYCSS Tax_Id=164756 SubName: Full=Transcription... 147 4e-34 tr|A3PYC1|A3PYC1_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 147 4e-34 tr|A1UEW1|A1UEW1_MYCSK Tax_Id=189918 SubName: Full=Transcription... 147 4e-34 tr|A1T7R1|A1T7R1_MYCVP Tax_Id=350058 SubName: Full=Transcription... 146 9e-34 tr|A4TCL0|A4TCL0_MYCGI Tax_Id=350054 SubName: Full=Transcription... 140 4e-32 tr|Q73W05|Q73W05_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 139 8e-32 tr|A0QIS5|A0QIS5_MYCA1 Tax_Id=243243 SubName: Full=DNA-binding p... 139 8e-32 tr|Q7TXZ4|Q7TXZ4_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC... 137 3e-31 tr|O33287|O33287_MYCTU Tax_Id=1773 SubName: Full=DNA-binding pro... 137 3e-31 tr|C6DLG2|C6DLG2_MYCTK Tax_Id=478434 SubName: Full=Transcription... 137 3e-31 tr|C1AFK7|C1AFK7_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 137 3e-31 tr|A5WQZ6|A5WQZ6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 137 3e-31 tr|A5U698|A5U698_MYCTA Tax_Id=419947 SubName: Full=Putative tran... 137 3e-31 tr|A1KM86|A1KM86_MYCBP Tax_Id=410289 SubName: Full=Possible tran... 137 3e-31 tr|D6G304|D6G304_MYCTU Tax_Id=478435 SubName: Full=Transcription... 137 3e-31 tr|D6FNF1|D6FNF1_MYCTU Tax_Id=611304 SubName: Full=Transcription... 137 3e-31 tr|D6FJW9|D6FJW9_MYCTU Tax_Id=611303 SubName: Full=Transcription... 137 3e-31 tr|D6F7L3|D6F7L3_MYCTU Tax_Id=611302 SubName: Full=Transcription... 137 3e-31 tr|D5ZJS5|D5ZJS5_MYCTU Tax_Id=537210 SubName: Full=Transcription... 137 3e-31 tr|D5Z6S4|D5Z6S4_MYCTU Tax_Id=537209 SubName: Full=Transcription... 137 3e-31 tr|D5YUL7|D5YUL7_MYCTU Tax_Id=515616 SubName: Full=Transcription... 137 3e-31 tr|D5YI45|D5YI45_MYCTU Tax_Id=520140 SubName: Full=Transcription... 137 3e-31 tr|D5Y7M1|D5Y7M1_MYCTU Tax_Id=520141 SubName: Full=Transcription... 137 3e-31 tr|A4KK19|A4KK19_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 137 3e-31 tr|A2VL82|A2VL82_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 137 3e-31 tr|B1MD25|B1MD25_MYCA9 Tax_Id=561007 SubName: Full=Possible tran... 136 9e-31 tr|B2HKZ9|B2HKZ9_MYCMM Tax_Id=216594 SubName: Full=Transcription... 134 4e-30 tr|A0PT96|A0PT96_MYCUA Tax_Id=362242 SubName: Full=Transcription... 132 2e-29 tr|D5PJK0|D5PJK0_9MYCO Tax_Id=525368 SubName: Full=Transcription... 132 2e-29 tr|D5PMN6|D5PMN6_COREQ Tax_Id=525370 SubName: Full=Transcription... 121 2e-26 tr|C1B372|C1B372_RHOOB Tax_Id=632772 SubName: Full=Putative Xre ... 116 8e-25 tr|Q0S1Q8|Q0S1Q8_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 114 3e-24 tr|D0LBN2|D0LBN2_GORB4 Tax_Id=526226 SubName: Full=Helix-turn-he... 114 3e-24 tr|C0ZYL4|C0ZYL4_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre ... 114 4e-24 tr|C3JKD2|C3JKD2_RHOER Tax_Id=596309 SubName: Full=Putative tran... 114 4e-24 tr|Q5YSY7|Q5YSY7_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 108 3e-22 tr|D5UDA0|D5UDA0_9CELL Tax_Id=446466 SubName: Full=Transcription... 106 8e-22 tr|D2Q1S2|D2Q1S2_KRIFD Tax_Id=479435 SubName: Full=Helix-turn-he... 105 2e-21 tr|C6WDH3|C6WDH3_ACTMD Tax_Id=446462 SubName: Full=Helix-turn-he... 104 4e-21 tr|C7R3F7|C7R3F7_JONDD Tax_Id=471856 SubName: Full=Transcription... 103 9e-21 tr|D1BJ45|D1BJ45_SANKS Tax_Id=446469 SubName: Full=Helix-turn-he... 102 1e-20 tr|C1YNK7|C1YNK7_NOCDA Tax_Id=446468 SubName: Full=Helix-turn-he... 102 1e-20 tr|D1C080|D1C080_XYLCX Tax_Id=446471 SubName: Full=Transcription... 102 2e-20 tr|B5HFA8|B5HFA8_STRPR Tax_Id=457429 SubName: Full=DNA-binding p... 102 2e-20 >tr|A0QVU1|A0QVU1_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, XRE family protein;[Mycobacterium smegmatis] Length = 112 Score = 210 bits (534), Expect = 5e-53 Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL Sbjct: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQVSMAVA 112 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQVSMAVA Sbjct: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQVSMAVA 112 >tr|Q1BA51|Q1BA51_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 104 Score = 147 bits (371), Expect = 4e-34 Identities = 85/113 (75%), Positives = 89/113 (78%), Gaps = 10/113 (8%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M ALLREVIGDVLR ART QGRTLREVSD ARVSLGYLSEVERGRKEASSELLSAIC AL Sbjct: 1 MAALLREVIGDVLRRARTSQGRTLREVSDTARVSLGYLSEVERGRKEASSELLSAICGAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQ-VSMAVA 112 DVPLS+VL+DAGE +A EH A + ID TKVVIPQ VSMAVA Sbjct: 61 DVPLSQVLSDAGEELAHLEH---------AAGVPNIDVTTKVVIPQAVSMAVA 104 >tr|A3PYC1|A3PYC1_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 104 Score = 147 bits (371), Expect = 4e-34 Identities = 85/113 (75%), Positives = 89/113 (78%), Gaps = 10/113 (8%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M ALLREVIGDVLR ART QGRTLREVSD ARVSLGYLSEVERGRKEASSELLSAIC AL Sbjct: 1 MAALLREVIGDVLRRARTSQGRTLREVSDTARVSLGYLSEVERGRKEASSELLSAICGAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQ-VSMAVA 112 DVPLS+VL+DAGE +A EH A + ID TKVVIPQ VSMAVA Sbjct: 61 DVPLSQVLSDAGEELAHLEH---------AAGVPNIDVTTKVVIPQAVSMAVA 104 >tr|A1UEW1|A1UEW1_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 104 Score = 147 bits (371), Expect = 4e-34 Identities = 85/113 (75%), Positives = 89/113 (78%), Gaps = 10/113 (8%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M ALLREVIGDVLR ART QGRTLREVSD ARVSLGYLSEVERGRKEASSELLSAIC AL Sbjct: 1 MAALLREVIGDVLRRARTSQGRTLREVSDTARVSLGYLSEVERGRKEASSELLSAICGAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQ-VSMAVA 112 DVPLS+VL+DAGE +A EH A + ID TKVVIPQ VSMAVA Sbjct: 61 DVPLSQVLSDAGEELAHLEH---------AAGVPNIDVTTKVVIPQAVSMAVA 104 >tr|A1T7R1|A1T7R1_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium vanbaalenii] Length = 110 Score = 146 bits (368), Expect = 9e-34 Identities = 84/113 (74%), Positives = 90/113 (79%), Gaps = 4/113 (3%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 MT LLREVIGDVLR AR +QGRTLREVSD+ARVSLGYLSEVERGRKEASSELLSAIC AL Sbjct: 1 MTTLLREVIGDVLRRARVEQGRTLREVSDSARVSLGYLSEVERGRKEASSELLSAICGAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQ-VSMAVA 112 DVPLSRVL++AG+ MA E E + A ID TKVVIPQ VSMAVA Sbjct: 61 DVPLSRVLSEAGDEMAVEEARVAAPEPIGTAG---IDVTTKVVIPQVVSMAVA 110 >tr|A4TCL0|A4TCL0_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium gilvum] Length = 104 Score = 140 bits (354), Expect = 4e-32 Identities = 82/113 (72%), Positives = 91/113 (80%), Gaps = 10/113 (8%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 MTAL+REVIGDVLR AR +QGRTLREVSD+ARVSLGYLSEVERGRKEASSELLSAIC AL Sbjct: 1 MTALVREVIGDVLRRARIEQGRTLREVSDSARVSLGYLSEVERGRKEASSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQ-VSMAVA 112 DVPLSRVL++AG+ +A E + A +ID TKVVIPQ VSMAVA Sbjct: 61 DVPLSRVLSEAGQELAVEE---------SRAPAPKIDVTTKVVIPQVVSMAVA 104 >tr|Q73W05|Q73W05_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 108 Score = 139 bits (351), Expect = 8e-32 Identities = 83/113 (73%), Positives = 88/113 (77%), Gaps = 6/113 (5%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M L+REVIGDVLR ART QGRTLREVSD ARVSLGYLSEVERGRKE SSELL+AICDAL Sbjct: 1 MPPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQV-SMAVA 112 DVPLS VLTDAGE MA E A VA IDA+TKVVIP V S+A+A Sbjct: 61 DVPLSSVLTDAGERMASEERAA-----VAAPAGPSIDASTKVVIPPVASLALA 108 >tr|A0QIS5|A0QIS5_MYCA1 Tax_Id=243243 SubName: Full=DNA-binding protein;[Mycobacterium avium] Length = 108 Score = 139 bits (351), Expect = 8e-32 Identities = 83/113 (73%), Positives = 88/113 (77%), Gaps = 6/113 (5%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M L+REVIGDVLR ART QGRTLREVSD ARVSLGYLSEVERGRKE SSELL+AICDAL Sbjct: 1 MPPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQV-SMAVA 112 DVPLS VLTDAGE MA E A VA IDA+TKVVIP V S+A+A Sbjct: 61 DVPLSSVLTDAGERMASEERAA-----VAAPAGPSIDASTKVVIPPVASLALA 108 >tr|Q7TXZ4|Q7TXZ4_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|O33287|O33287_MYCTU Tax_Id=1773 SubName: Full=DNA-binding protein, putative; SubName: Full=POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium tuberculosis] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|C6DLG2|C6DLG2_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|C1AFK7|C1AFK7_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|A5WQZ6|A5WQZ6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|A5U698|A5U698_MYCTA Tax_Id=419947 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|A1KM86|A1KM86_MYCBP Tax_Id=410289 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium bovis] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D6G304|D6G304_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis KZN 605] Length = 118 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 7 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 66 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 67 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 118 >tr|D6FNF1|D6FNF1_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis K85] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D6FJW9|D6FJW9_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis CPHL_A] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D6F7L3|D6F7L3_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T46] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D5ZJS5|D5ZJS5_MYCTU Tax_Id=537210 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T17] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D5Z6S4|D5Z6S4_MYCTU Tax_Id=537209 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis GM 1503] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D5YUL7|D5YUL7_MYCTU Tax_Id=515616 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis 02_1987] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D5YI45|D5YI45_MYCTU Tax_Id=520140 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis EAS054] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|D5Y7M1|D5Y7M1_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis T85] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|A4KK19|A4KK19_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 118 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 7 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 66 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 67 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 118 >tr|A2VL82|A2VL82_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 112 Score = 137 bits (346), Expect = 3e-31 Identities = 81/113 (71%), Positives = 89/113 (78%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M AL+REV+GDVLR AR QGRTLREVSD+ARVSLGYLSE+ERGRKE SSELLSAIC AL Sbjct: 1 MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVI-PQVSMAVA 112 +PLS VL DAGE MAR+E AR A A IDA+TKVVI P VS+AVA Sbjct: 61 QLPLSVVLIDAGERMARQERLAR-ATPAGRATGATIDASTKVVIAPVVSLAVA 112 >tr|B1MD25|B1MD25_MYCA9 Tax_Id=561007 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium abscessus] Length = 116 Score = 136 bits (342), Expect = 9e-31 Identities = 77/116 (66%), Positives = 89/116 (76%), Gaps = 4/116 (3%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLRE IGD LR+AR+ QG+TLREVSD+ARVSLGYLSEVERGRKEASSELL+AIC AL Sbjct: 1 MALLLREAIGDTLRSARSGQGKTLREVSDSARVSLGYLSEVERGRKEASSELLAAICGAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGR---IDAATKVVIPQV-SMAVA 112 DVPLS+VL++ E +ARRE +E + G ID ATKVVIPQV +MA A Sbjct: 61 DVPLSQVLSEVSERLARREAPVAASEAALASTAGSLSGIDVATKVVIPQVRAMAAA 116 >tr|B2HKZ9|B2HKZ9_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 108 Score = 134 bits (337), Expect = 4e-30 Identities = 78/113 (69%), Positives = 86/113 (76%), Gaps = 6/113 (5%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M +L+REVIGDVLR RT QGRTLREVSD ARVSLGYLSE+ERGRKE SSELL+AICDAL Sbjct: 1 MASLVREVIGDVLRGERTSQGRTLREVSDTARVSLGYLSEIERGRKEPSSELLNAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQV-SMAVA 112 VPLS VL AGE MAR E + A A IDA T++VIPQV S+AVA Sbjct: 61 QVPLSEVLIGAGERMARDERAIQTAPTGAT-----IDAGTRLVIPQVASLAVA 108 >tr|A0PT96|A0PT96_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 108 Score = 132 bits (331), Expect = 2e-29 Identities = 77/113 (68%), Positives = 85/113 (75%), Gaps = 6/113 (5%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M +L+REVIGDVLR RT QGRTLREV D ARVSLGYLSE+ERGRKE SSELL+AICDAL Sbjct: 1 MASLVREVIGDVLRGERTSQGRTLREVFDTARVSLGYLSEIERGRKEPSSELLNAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQ-VSMAVA 112 VPLS VL AGE MAR E + A A IDA T++VIPQ VS+AVA Sbjct: 61 QVPLSEVLIGAGERMARDERAIQTAPTGAT-----IDAGTRLVIPQVVSLAVA 108 >tr|D5PJK0|D5PJK0_9MYCO Tax_Id=525368 SubName: Full=Transcriptional regulatory protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 112 Score = 132 bits (331), Expect = 2e-29 Identities = 79/113 (69%), Positives = 86/113 (76%), Gaps = 2/113 (1%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M +L+REVIGDVLR AR QGRTLREVSD+ARVSLGYLSEVERGRKE SSELL+AICDAL Sbjct: 1 MPSLVREVIGDVLREARMTQGRTLREVSDSARVSLGYLSEVERGRKEPSSELLNAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQV-SMAVA 112 +VPLS VL DAGE MA E A V IDA TKVVIP V S+A+A Sbjct: 61 EVPLSSVLIDAGERMAGLERVTHGAVADGV-RAPSIDADTKVVIPPVASLAIA 112 >tr|D5PMN6|D5PMN6_COREQ Tax_Id=525370 SubName: Full=Transcriptional regulator;[Rhodococcus equi ATCC 33707] Length = 120 Score = 121 bits (304), Expect = 2e-26 Identities = 69/110 (62%), Positives = 79/110 (71%), Gaps = 5/110 (4%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLRE IGD LR R Q RTLREVS++ARVSLGYLSE+ERGRKEASSELL+AICDAL Sbjct: 1 MALLLREAIGDSLRRTRVSQSRTLREVSNSARVSLGYLSEIERGRKEASSELLAAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDARE-----AEQVAVANLGRIDAATKVVIP 105 +VPLS VL D ES+A + + E A+QV GRI T+VVIP Sbjct: 61 EVPLSEVLVDVSESLAVKPPETAEAVTGAAQQVTQQVGGRIAQDTRVVIP 110 >tr|C1B372|C1B372_RHOOB Tax_Id=632772 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus opacus] Length = 128 Score = 116 bits (291), Expect = 8e-25 Identities = 72/126 (57%), Positives = 81/126 (64%), Gaps = 14/126 (11%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLRE IGD LR R Q RTLREVS++ARVSLGYLSEVERGRKEASSELL+AICDAL Sbjct: 1 MALLLREAIGDSLRRTRVSQSRTLREVSNSARVSLGYLSEVERGRKEASSELLAAICDAL 60 Query: 61 DVPLSRVLTDAGESM-----ARREHDAREAEQVAVANLGRIDAA---------TKVVIPQ 106 DVPLS VL D ES+ A+R R A + A A A T+VVIP Sbjct: 61 DVPLSDVLVDVSESLSDGSTAKRADTERHAVESAPAEAPAASARPGSTTIARDTRVVIPA 120 Query: 107 VSMAVA 112 + A+A Sbjct: 121 PAQALA 126 >tr|Q0S1Q8|Q0S1Q8_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator;[Rhodococcus sp.] Length = 128 Score = 114 bits (286), Expect = 3e-24 Identities = 71/126 (56%), Positives = 81/126 (64%), Gaps = 14/126 (11%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLRE IGD LR R Q RTLREVS++ARVSLGYLSEVERGRKEASSELL+AICDAL Sbjct: 1 MALLLREAIGDSLRRTRVSQSRTLREVSNSARVSLGYLSEVERGRKEASSELLAAICDAL 60 Query: 61 DVPLSRVLTDAGESM-----ARREHDAREAEQVAVANLGRIDAA---------TKVVIPQ 106 +VPLS VL D ES+ A+R R A + A A A T+VVIP Sbjct: 61 EVPLSDVLVDVSESLSDGSSAKRAGTERHAVESAPAEAPAASARPGSTTIARDTRVVIPA 120 Query: 107 VSMAVA 112 + A+A Sbjct: 121 PAQALA 126 >tr|D0LBN2|D0LBN2_GORB4 Tax_Id=526226 SubName: Full=Helix-turn-helix domain protein;[Gordonia bronchialis] Length = 116 Score = 114 bits (286), Expect = 3e-24 Identities = 66/105 (62%), Positives = 75/105 (71%), Gaps = 3/105 (2%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLRE +GD LR RTDQGRTLREVS ARVSLGYLSEVERG+KEASSELL+AICDAL Sbjct: 1 MAMLLREALGDSLRRVRTDQGRTLREVSTDARVSLGYLSEVERGQKEASSELLAAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIP 105 DV ++ +L DAG +M E + A A G +TKVVIP Sbjct: 61 DVEIADLLLDAGNAMRPVELSGTGFDTPAEAEAG---LSTKVVIP 102 >tr|C0ZYL4|C0ZYL4_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus erythropolis] Length = 126 Score = 114 bits (285), Expect = 4e-24 Identities = 67/116 (57%), Positives = 80/116 (68%), Gaps = 11/116 (9%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLRE IGD LR R Q RTLREVS++ARVSLGYLSEVERGRKEASSELL+AICDAL Sbjct: 1 MALLLREAIGDSLRRTRVSQSRTLREVSNSARVSLGYLSEVERGRKEASSELLAAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREH---DAREAEQVAVANLGRIDAA--------TKVVIP 105 VPLS VL D E++A ++ R+ + AV+ G + A+ T+VVIP Sbjct: 61 AVPLSDVLVDVSETLATKKSAPVAGRQVAEPAVSASGSVSASGSPTIARDTRVVIP 116 >tr|C3JKD2|C3JKD2_RHOER Tax_Id=596309 SubName: Full=Putative transcriptional regulatory protein;[Rhodococcus erythropolis SK121] Length = 126 Score = 114 bits (285), Expect = 4e-24 Identities = 67/116 (57%), Positives = 80/116 (68%), Gaps = 11/116 (9%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLRE IGD LR R Q RTLREVS++ARVSLGYLSEVERGRKEASSELL+AICDAL Sbjct: 1 MALLLREAIGDSLRRTRVSQSRTLREVSNSARVSLGYLSEVERGRKEASSELLAAICDAL 60 Query: 61 DVPLSRVLTDAGESMARREH---DAREAEQVAVANLGRIDAA--------TKVVIP 105 VPLS VL D E++A ++ R+ + AV+ G + A+ T+VVIP Sbjct: 61 AVPLSDVLVDVSETLATKKSAPVAGRQVAEPAVSASGSVSASGSPTIARDTRVVIP 116 >tr|Q5YSY7|Q5YSY7_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 145 Score = 108 bits (269), Expect = 3e-22 Identities = 59/73 (80%), Positives = 61/73 (83%) Query: 4 LLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDALDVP 63 LLRE IGD LR AR Q RTLREVS +ARVSLGYLSEVERGRKEASSELL+AICDALDVP Sbjct: 3 LLREAIGDSLRRARLAQHRTLREVSTSARVSLGYLSEVERGRKEASSELLAAICDALDVP 62 Query: 64 LSRVLTDAGESMA 76 LSRVL D MA Sbjct: 63 LSRVLWDVSTIMA 75 >tr|D5UDA0|D5UDA0_9CELL Tax_Id=446466 SubName: Full=Transcriptional regulator, XRE family;[Cellulomonas flavigena DSM 20109] Length = 120 Score = 106 bits (265), Expect = 8e-22 Identities = 63/100 (63%), Positives = 72/100 (72%), Gaps = 4/100 (4%) Query: 4 LLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDALDVP 63 +LR IGDVLR+AR QGRTLREVS AARVSLGYLSEVERG+KEASSELLS+ICDALDVP Sbjct: 3 VLRREIGDVLRDARQRQGRTLREVSSAARVSLGYLSEVERGQKEASSELLSSICDALDVP 62 Query: 64 LSRVLTDAGESMARRE----HDAREAEQVAVANLGRIDAA 99 +S VL + + +A E D A+ A A L D A Sbjct: 63 MSLVLREVSDRVAVAEGLLIPDTVPADLTAAAGLPGGDRA 102 >tr|D2Q1S2|D2Q1S2_KRIFD Tax_Id=479435 SubName: Full=Helix-turn-helix domain protein;[Kribbella flavida] Length = 94 Score = 105 bits (262), Expect = 2e-21 Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 5/91 (5%) Query: 4 LLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDALDVP 63 L+R ++GDVLR R QGRTLREVS ARVSLGYLSEVERG+KEASSELL+AIC ALDVP Sbjct: 3 LVRGLLGDVLRRKRLRQGRTLREVSAEARVSLGYLSEVERGQKEASSELLAAICTALDVP 62 Query: 64 LSRVLTDAGESMARRE-----HDAREAEQVA 89 LS V + E +AR E H A E E VA Sbjct: 63 LSTVFAEVSEDLAREEALVLAHRAIEPEVVA 93 >tr|C6WDH3|C6WDH3_ACTMD Tax_Id=446462 SubName: Full=Helix-turn-helix domain protein;[Actinosynnema mirum] Length = 138 Score = 104 bits (259), Expect = 4e-21 Identities = 55/68 (80%), Positives = 60/68 (88%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 MT LLRE IGD LR+ART Q RTLREVS ARVSLGYLSEVERGRKEASSELL+AICDAL Sbjct: 1 MTVLLREAIGDRLRHARTTQRRTLREVSRTARVSLGYLSEVERGRKEASSELLAAICDAL 60 Query: 61 DVPLSRVL 68 ++PLS +L Sbjct: 61 ELPLSELL 68 >tr|C7R3F7|C7R3F7_JONDD Tax_Id=471856 SubName: Full=Transcriptional regulator, XRE family;[Jonesia denitrificans] Length = 99 Score = 103 bits (256), Expect = 9e-21 Identities = 54/76 (71%), Positives = 62/76 (81%) Query: 4 LLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDALDVP 63 +LR IGDVLR+AR QGRTLREVS AARVSLGYLSEVERG+KEASSELL +ICDALD P Sbjct: 3 VLRREIGDVLRSARQRQGRTLREVSSAARVSLGYLSEVERGQKEASSELLGSICDALDTP 62 Query: 64 LSRVLTDAGESMARRE 79 LS +L + + +A E Sbjct: 63 LSLILREVSDRVAVAE 78 >tr|D1BJ45|D1BJ45_SANKS Tax_Id=446469 SubName: Full=Helix-turn-helix protein;[Sanguibacter keddieii] Length = 109 Score = 102 bits (254), Expect = 1e-20 Identities = 53/76 (69%), Positives = 63/76 (82%) Query: 4 LLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDALDVP 63 +LR IGDVLR+AR QGRTLREVS AARVSLGYLSEVERG+KEASSELL +IC+ALD+P Sbjct: 3 VLRREIGDVLRDARQLQGRTLREVSSAARVSLGYLSEVERGQKEASSELLGSICEALDIP 62 Query: 64 LSRVLTDAGESMARRE 79 LS +L + + +A E Sbjct: 63 LSSILREVSDRIAVAE 78 >tr|C1YNK7|C1YNK7_NOCDA Tax_Id=446468 SubName: Full=Helix-turn-helix protein;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 118 Score = 102 bits (254), Expect = 1e-20 Identities = 63/115 (54%), Positives = 76/115 (66%), Gaps = 9/115 (7%) Query: 1 MTALLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDAL 60 M LLR ++GDVLR R QGRTLREVS ARVSLGYLSEVERG+KEASSELLS+IC AL Sbjct: 1 MMVLLRHLLGDVLRRLRQRQGRTLREVSADARVSLGYLSEVERGQKEASSELLSSICGAL 60 Query: 61 DVPLSRVLTDAGESMARRE-------HDAREAEQVAVANLGRIDAATKVVIPQVS 108 VPLS+VL + + +A E DA + V+ +LG +V PQV+ Sbjct: 61 GVPLSQVLREVSDQLALAELQEAALLGDAVTTDPVSAQDLGIDPVPDRV--PQVA 113 >tr|D1C080|D1C080_XYLCX Tax_Id=446471 SubName: Full=Transcriptional regulator, XRE family;[Xylanimonas cellulosilytica] Length = 114 Score = 102 bits (253), Expect = 2e-20 Identities = 53/76 (69%), Positives = 64/76 (84%) Query: 4 LLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDALDVP 63 +LR IGDVLR+AR QGRTLREVS AARVSLGYLSEVERG+KEASSELL++IC+ALD+P Sbjct: 3 VLRREIGDVLRDARQRQGRTLREVSSAARVSLGYLSEVERGQKEASSELLASICEALDLP 62 Query: 64 LSRVLTDAGESMARRE 79 +S VL + + +A E Sbjct: 63 MSLVLREVSDRIAIAE 78 >tr|B5HFA8|B5HFA8_STRPR Tax_Id=457429 SubName: Full=DNA-binding protein;[Streptomyces pristinaespiralis ATCC 25486] Length = 126 Score = 102 bits (253), Expect = 2e-20 Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 7/106 (6%) Query: 4 LLREVIGDVLRNARTDQGRTLREVSDAARVSLGYLSEVERGRKEASSELLSAICDALDVP 63 LLR ++GDVLR R QGRTLREVS +ARVSLGYLSEVERG+KEASSELLSAICDALDV Sbjct: 3 LLRRLLGDVLRRQRQRQGRTLREVSSSARVSLGYLSEVERGQKEASSELLSAICDALDVR 62 Query: 64 LSRVLTDAGESMARREHDAREAEQVAVANLGRIDAATKVVIPQVSM 109 +S ++ + + ++ AE A G + A + ++ VS+ Sbjct: 63 MSELMREVSDELSL-------AELAESAAAGEVPAPVRPMLGSVSV 101 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.315 0.128 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 669,590,748 Number of extensions: 20318845 Number of successful extensions: 91596 Number of sequences better than 10.0: 2915 Number of HSP's gapped: 93146 Number of HSP's successfully gapped: 2923 Length of query: 112 Length of database: 4,236,830,644 Length adjustment: 80 Effective length of query: 32 Effective length of database: 3,236,201,524 Effective search space: 103558448768 Effective search space used: 103558448768 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 75 (33.5 bits)