BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2724 (188 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P94965|RECX_MYCS2 Tax_Id=246196 (recX)RecName: Full=Regulator... 336 9e-91 sp|A3PYE4|RECX_MYCSJ Tax_Id=164757 (recX)RecName: Full=Regulator... 220 6e-56 sp|Q1BA28|RECX_MYCSS Tax_Id=164756 (recX)RecName: Full=Regulator... 219 9e-56 sp|A1UEY4|RECX_MYCSK Tax_Id=189918 (recX)RecName: Full=Regulator... 219 9e-56 sp|A1T7T4|RECX_MYCVP Tax_Id=350058 (recX)RecName: Full=Regulator... 217 6e-55 tr|A4TCL6|A4TCL6_MYCGI Tax_Id=350054 SubName: Full=Regulatory pr... 216 1e-54 tr|D5PJK6|D5PJK6_9MYCO Tax_Id=525368 (recX)SubName: Full=Recombi... 189 1e-46 sp|A0QIR5|RECX_MYCA1 Tax_Id=243243 (recX)RecName: Full=Regulator... 187 7e-46 sp|A0PT88|RECX_MYCUA Tax_Id=362242 (recX)RecName: Full=Regulator... 183 7e-45 sp|B2HL07|RECX_MYCMM Tax_Id=216594 (recX)RecName: Full=Regulator... 183 7e-45 tr|Q73W14|Q73W14_MYCPA Tax_Id=1770 (recX)SubName: Full=RecX;[Myc... 179 1e-43 sp|P37859|RECX_MYCLE Tax_Id=1769 (recX)RecName: Full=Regulatory ... 179 2e-43 sp|B8ZQT6|RECX_MYCLB Tax_Id=561304 (recX)RecName: Full=Regulator... 179 2e-43 sp|P0A5U8|RECX_MYCTU Tax_Id=1773 (recX)RecName: Full=Regulatory ... 175 3e-42 sp|A5U688|RECX_MYCTA Tax_Id=419947 (recX)RecName: Full=Regulator... 175 3e-42 sp|C1AFJ5|RECX_MYCBT Tax_Id=561275 (recX)RecName: Full=Regulator... 175 3e-42 sp|A1KM74|RECX_MYCBP Tax_Id=410289 (recX)RecName: Full=Regulator... 175 3e-42 sp|P0A5U9|RECX_MYCBO Tax_Id=1765 (recX)RecName: Full=Regulatory ... 175 3e-42 tr|C6DLH2|C6DLH2_MYCTK Tax_Id=478434 SubName: Full=Regulatory pr... 175 3e-42 tr|A5WQY7|A5WQY7_MYCTF Tax_Id=336982 SubName: Full=RecA-regulati... 175 3e-42 tr|D6G314|D6G314_MYCTU Tax_Id=478435 SubName: Full=Regulatory pr... 175 3e-42 tr|D6FNE2|D6FNE2_MYCTU Tax_Id=611304 SubName: Full=Regulatory pr... 175 3e-42 tr|D6FJV9|D6FJV9_MYCTU Tax_Id=611303 SubName: Full=Regulatory pr... 175 3e-42 tr|D6F7K2|D6F7K2_MYCTU Tax_Id=611302 SubName: Full=Regulatory pr... 175 3e-42 tr|D5ZJR4|D5ZJR4_MYCTU Tax_Id=537210 SubName: Full=Regulatory pr... 175 3e-42 tr|D5Z6R4|D5Z6R4_MYCTU Tax_Id=537209 SubName: Full=Regulatory pr... 175 3e-42 tr|D5YUK7|D5YUK7_MYCTU Tax_Id=515616 SubName: Full=Recombination... 175 3e-42 tr|D5YI34|D5YI34_MYCTU Tax_Id=520140 SubName: Full=Recombination... 175 3e-42 tr|A4KK13|A4KK13_MYCTU Tax_Id=395095 SubName: Full=Regulatory pr... 175 3e-42 tr|D5Y7L2|D5Y7L2_MYCTU Tax_Id=520141 SubName: Full=Recombination... 174 6e-42 tr|A2VL73|A2VL73_MYCTU Tax_Id=348776 SubName: Full=Regulatory pr... 168 2e-40 sp|B1MD16|RECX_MYCA9 Tax_Id=561007 (recX)RecName: Full=Regulator... 167 4e-40 tr|C0ZYM7|C0ZYM7_RHOE4 Tax_Id=234621 (recX)SubName: Full=Regulat... 153 8e-36 tr|C3JKB8|C3JKB8_RHOER Tax_Id=596309 (recX)SubName: Full=Regulat... 153 8e-36 tr|C1B382|C1B382_RHOOB Tax_Id=632772 (recX)SubName: Full=Regulat... 139 2e-31 tr|Q0S1P8|Q0S1P8_RHOSR Tax_Id=101510 (recX)SubName: Full=Regulat... 137 5e-31 tr|D5PML8|D5PML8_COREQ Tax_Id=525370 (recX)SubName: Full=Recombi... 137 6e-31 tr|C7MVD3|C7MVD3_SACVD Tax_Id=471857 SubName: Full=Uncharacteriz... 129 2e-28 tr|A1SJ62|A1SJ62_NOCSJ Tax_Id=196162 SubName: Full=Regulatory pr... 126 1e-27 tr|D3LQU5|D3LQU5_MICLU Tax_Id=596312 (recX)SubName: Full=Regulat... 124 7e-27 tr|D5UMC4|D5UMC4_TSUPA Tax_Id=521096 SubName: Full=Regulatory pr... 121 3e-26 tr|C6WAA5|C6WAA5_ACTMD Tax_Id=446462 SubName: Full=Regulatory pr... 120 8e-26 tr|C9NBE4|C9NBE4_9ACTO Tax_Id=591167 SubName: Full=Regulatory pr... 120 8e-26 tr|Q5YT02|Q5YT02_NOCFA Tax_Id=37329 (recX)SubName: Full=Putative... 120 1e-25 tr|C4RDE1|C4RDE1_9ACTO Tax_Id=219305 SubName: Full=RecX-family t... 120 1e-25 >sp|P94965|RECX_MYCS2 Tax_Id=246196 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium smegmatis] Length = 188 Score = 336 bits (861), Expect = 9e-91 Identities = 174/188 (92%), Positives = 174/188 (92%) Query: 1 MTSSRPRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPD 60 MTSSRPRLTSEPSDVPDGEQAQDPRTREEQAKNVC ETQLTKRGYPD Sbjct: 1 MTSSRPRLTSEPSDVPDGEQAQDPRTREEQAKNVCLRLLTVRARTRAELETQLTKRGYPD 60 Query: 61 DVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALAD 120 DVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALAD Sbjct: 61 DVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALAD 120 Query: 121 LDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 LDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA Sbjct: 121 LDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 Query: 181 NERERRRV 188 NERERRRV Sbjct: 181 NERERRRV 188 >sp|A3PYE4|RECX_MYCSJ Tax_Id=164757 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium sp.] Length = 183 Score = 220 bits (561), Expect = 6e-56 Identities = 121/188 (64%), Positives = 136/188 (72%), Gaps = 5/188 (2%) Query: 1 MTSSRPRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPD 60 MTS TSE PD E REEQA C +LT+RGY + Sbjct: 1 MTSFPHPSTSESGPDPDSEP-----NREEQAHAYCLRLLTARARTRAELSGKLTQRGYDE 55 Query: 61 DVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALAD 120 V ARVLDRL EVGL+DDEDFAEQWVRSRHL AGKGKRALA ELR+KGVDDEVISS+LAD Sbjct: 56 PVVARVLDRLVEVGLVDDEDFAEQWVRSRHLYAGKGKRALAAELRRKGVDDEVISSSLAD 115 Query: 121 LDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 +D AER RAE+LVRD+LRRE+LD P +D+KV RR+ GMLARRGY+QSMA DVV+VELA Sbjct: 116 IDAGAERDRAERLVRDRLRREKLDDEPGSDLKVKRRMAGMLARRGYSQSMALDVVTVELA 175 Query: 181 NERERRRV 188 ERERRRV Sbjct: 176 GERERRRV 183 >sp|Q1BA28|RECX_MYCSS Tax_Id=164756 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium sp.] Length = 183 Score = 219 bits (559), Expect = 9e-56 Identities = 121/188 (64%), Positives = 136/188 (72%), Gaps = 5/188 (2%) Query: 1 MTSSRPRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPD 60 MTS TSE PD E REEQA C +LT+RGY + Sbjct: 1 MTSFPHPSTSESGPDPDSEP-----NREEQAHAYCLRLLTARARTRAELAGKLTQRGYDE 55 Query: 61 DVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALAD 120 V ARVLDRL +VGL+DDEDFAEQWVRSRHL AGKGKRALA ELR+KGVDDEVISS+LAD Sbjct: 56 PVVARVLDRLVDVGLVDDEDFAEQWVRSRHLYAGKGKRALAAELRRKGVDDEVISSSLAD 115 Query: 121 LDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 +D AER RAE+LVRD+LRRE+LD P +D+KV RRL GMLARRGY+QSMA DVV+VELA Sbjct: 116 IDAGAERDRAERLVRDRLRREKLDDEPGSDLKVKRRLAGMLARRGYSQSMALDVVTVELA 175 Query: 181 NERERRRV 188 ERERRRV Sbjct: 176 GERERRRV 183 >sp|A1UEY4|RECX_MYCSK Tax_Id=189918 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium sp.] Length = 183 Score = 219 bits (559), Expect = 9e-56 Identities = 121/188 (64%), Positives = 136/188 (72%), Gaps = 5/188 (2%) Query: 1 MTSSRPRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPD 60 MTS TSE PD E REEQA C +LT+RGY + Sbjct: 1 MTSFPHPSTSESGPDPDSEP-----NREEQAHAYCLRLLTARARTRAELAGKLTQRGYDE 55 Query: 61 DVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALAD 120 V ARVLDRL +VGL+DDEDFAEQWVRSRHL AGKGKRALA ELR+KGVDDEVISS+LAD Sbjct: 56 PVVARVLDRLVDVGLVDDEDFAEQWVRSRHLYAGKGKRALAAELRRKGVDDEVISSSLAD 115 Query: 121 LDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 +D AER RAE+LVRD+LRRE+LD P +D+KV RRL GMLARRGY+QSMA DVV+VELA Sbjct: 116 IDAGAERDRAERLVRDRLRREKLDDEPGSDLKVKRRLAGMLARRGYSQSMALDVVTVELA 175 Query: 181 NERERRRV 188 ERERRRV Sbjct: 176 GERERRRV 183 >sp|A1T7T4|RECX_MYCVP Tax_Id=350058 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium vanbaalenii] Length = 184 Score = 217 bits (552), Expect = 6e-55 Identities = 114/174 (65%), Positives = 130/174 (74%), Gaps = 2/174 (1%) Query: 17 DGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLI 76 D +A + R EQA+ +C E L KRGYPDD++A VLDRLT+VGL+ Sbjct: 11 DPAEADESTKRGEQARALCLRLLTARARTRAELEAALAKRGYPDDIAAAVLDRLTQVGLV 70 Query: 77 DDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRD 136 DDEDFAEQWVRSR LNAGKGKRALA ELRKKGVD+EVI ALA +D AER RAEQLVRD Sbjct: 71 DDEDFAEQWVRSRRLNAGKGKRALAAELRKKGVDNEVIDGALAGIDAGAERTRAEQLVRD 130 Query: 137 KLRRERLDGTPENDV--KVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 KLRRE+L + D KV RRLVGMLARRGYNQ+MA+DVV+ ELANERERR+V Sbjct: 131 KLRREKLGDPDDRDAENKVARRLVGMLARRGYNQTMAFDVVTAELANERERRKV 184 >tr|A4TCL6|A4TCL6_MYCGI Tax_Id=350054 SubName: Full=Regulatory protein RecX;[Mycobacterium gilvum] Length = 191 Score = 216 bits (550), Expect = 1e-54 Identities = 121/191 (63%), Positives = 133/191 (69%), Gaps = 3/191 (1%) Query: 1 MTSSRPRLTSEPSDVPDGEQAQDP-RTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYP 59 MTS + DG D TR EQA+ +C E QLTKRGYP Sbjct: 1 MTSPMTLFPLPSTSDSDGTPGTDEFATRAEQARALCLRLLTVRARTRAELEAQLTKRGYP 60 Query: 60 DDVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALA 119 DDVSA VLDRL +VGL+DDEDFAEQWVRSR +NAGKGKRALA ELR KGVD EVI +ALA Sbjct: 61 DDVSAEVLDRLAQVGLVDDEDFAEQWVRSRRINAGKGKRALASELRNKGVDSEVIDAALA 120 Query: 120 DLDPAAERQRAEQLVRDKLRRERLDGTPENDV--KVTRRLVGMLARRGYNQSMAYDVVSV 177 D+D AER RAEQLVRDKLRRE+L + D KV RRLVGMLARRGY+QSMA DVV+ Sbjct: 121 DIDAGAERTRAEQLVRDKLRREKLGDPGDRDAENKVMRRLVGMLARRGYHQSMALDVVTT 180 Query: 178 ELANERERRRV 188 ELANERERR V Sbjct: 181 ELANERERRTV 191 >tr|D5PJK6|D5PJK6_9MYCO Tax_Id=525368 (recX)SubName: Full=Recombination regulator RecX;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 173 Score = 189 bits (480), Expect = 1e-46 Identities = 102/163 (62%), Positives = 118/163 (72%), Gaps = 3/163 (1%) Query: 26 TREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQW 85 +REEQA+ +C QL KRGYP+DVSA VLDRL VGL+DD DFA+QW Sbjct: 14 SREEQARTLCLRLLTARARTRAELHGQLAKRGYPEDVSASVLDRLAAVGLVDDTDFAQQW 73 Query: 86 VRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDG 145 V SR AGK KRALA ELR KGVD +VI++AL+ +D AER RAEQLVR KLRRE LDG Sbjct: 74 VASRRATAGKSKRALAAELRTKGVDRDVIATALSGIDAGAERDRAEQLVRAKLRRETLDG 133 Query: 146 TPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 +D KVTRRLVGMLARRGY+Q++A +VV EL ERERRRV Sbjct: 134 ---DDAKVTRRLVGMLARRGYSQNLACEVVIAELVAERERRRV 173 >sp|A0QIR5|RECX_MYCA1 Tax_Id=243243 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium avium] Length = 173 Score = 187 bits (474), Expect = 7e-46 Identities = 107/186 (57%), Positives = 124/186 (66%), Gaps = 16/186 (8%) Query: 3 SSRPRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDV 62 S P TSEPS REEQA+ +C +L KRGYPDDV Sbjct: 4 SCPPPSTSEPS-------------REEQARALCLRLLTARARTRAELHGRLAKRGYPDDV 50 Query: 63 SARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLD 122 S VLDRL VGLIDD DFA+QWV+SR +AGK KRALA EL KGVD++VI+S LA +D Sbjct: 51 STAVLDRLAAVGLIDDADFAQQWVQSRRAHAGKSKRALAAELHTKGVDNDVITSVLAGID 110 Query: 123 PAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANE 182 AER RAEQLVR KLRRE L ++D +VTRRLVGMLARRGY+Q++A +VV ELA E Sbjct: 111 AGAERDRAEQLVRSKLRRETL---AQDDARVTRRLVGMLARRGYSQNLACEVVLAELAAE 167 Query: 183 RERRRV 188 RERRRV Sbjct: 168 RERRRV 173 >sp|A0PT88|RECX_MYCUA Tax_Id=362242 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium ulcerans] Length = 173 Score = 183 bits (465), Expect = 7e-45 Identities = 105/183 (57%), Positives = 122/183 (66%), Gaps = 16/183 (8%) Query: 6 PRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSAR 65 P TSEPS REEQA+ +C QL KRGYP+DV R Sbjct: 7 PPSTSEPS-------------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDVGDR 53 Query: 66 VLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAA 125 VLDRLT VGL+DD DFA WV+SR NAGK +RALA EL+ KGVD +VI +ALA LD A Sbjct: 54 VLDRLTAVGLVDDADFAADWVQSRRANAGKSRRALAAELQAKGVDQDVIGTALAGLDAGA 113 Query: 126 ERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERER 185 ER RAEQLVR KLRRE+L E+D +VTRRLV MLARRGY+Q++A +VV ELA ER+R Sbjct: 114 ERGRAEQLVRTKLRREKL---TEDDARVTRRLVAMLARRGYSQTVACEVVIAELAAERDR 170 Query: 186 RRV 188 RRV Sbjct: 171 RRV 173 >sp|B2HL07|RECX_MYCMM Tax_Id=216594 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium marinum] Length = 173 Score = 183 bits (465), Expect = 7e-45 Identities = 105/183 (57%), Positives = 122/183 (66%), Gaps = 16/183 (8%) Query: 6 PRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSAR 65 P TSEPS REEQA+ +C QL KRGYP+DV R Sbjct: 7 PPSTSEPS-------------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDVGDR 53 Query: 66 VLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAA 125 VLDRLT VGL+DD DFA WV+SR NAGK +RALA EL+ KGVD +VI +ALA LD A Sbjct: 54 VLDRLTAVGLVDDADFAADWVQSRRANAGKSRRALAAELQAKGVDQDVIGTALAGLDAGA 113 Query: 126 ERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERER 185 ER RAEQLVR KLRRE+L E+D +VTRRLV MLARRGY+Q++A +VV ELA ER+R Sbjct: 114 ERGRAEQLVRTKLRREKL---TEDDARVTRRLVAMLARRGYSQTVACEVVIAELAAERDR 170 Query: 186 RRV 188 RRV Sbjct: 171 RRV 173 >tr|Q73W14|Q73W14_MYCPA Tax_Id=1770 (recX)SubName: Full=RecX;[Mycobacterium paratuberculosis] Length = 152 Score = 179 bits (454), Expect = 1e-43 Identities = 95/137 (69%), Positives = 109/137 (79%), Gaps = 3/137 (2%) Query: 52 QLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDD 111 +L KRGYPDDVS VLDRL VGLIDD DFA+QWV+SR +AGK KRALA EL KGVD+ Sbjct: 19 RLAKRGYPDDVSTAVLDRLAAVGLIDDADFAQQWVQSRRAHAGKSKRALAAELHTKGVDN 78 Query: 112 EVISSALADLDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMA 171 +VI+S LA +D AER RAEQLVR KLRRE L E+D +VTRRLVGMLARRGY+Q++A Sbjct: 79 DVITSVLAGIDAGAERDRAEQLVRSKLRRETL---AEDDARVTRRLVGMLARRGYSQNLA 135 Query: 172 YDVVSVELANERERRRV 188 +VV ELA ERERRRV Sbjct: 136 CEVVLAELAAERERRRV 152 >sp|P37859|RECX_MYCLE Tax_Id=1769 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium leprae] Length = 171 Score = 179 bits (453), Expect = 2e-43 Identities = 97/162 (59%), Positives = 114/162 (70%), Gaps = 3/162 (1%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGY D VS RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARILCLRLLTARSRTRAQLFGQLAKRGYADHVSERVLDRLAAVGLLDDNDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 RSR N GK KRALA +LR KG+D EVI++ LA +DPA ER+RAEQLVR +LRRE L Sbjct: 73 RSRRANVGKSKRALAADLRAKGIDSEVITTVLAGIDPAVERERAEQLVRTRLRREVLS-- 130 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 E+D +V+RRL+ MLARRGY+Q+ +VV ELA ERERRRV Sbjct: 131 -EDDARVSRRLMAMLARRGYSQTTICEVVVAELAAERERRRV 171 >sp|B8ZQT6|RECX_MYCLB Tax_Id=561304 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium leprae] Length = 171 Score = 179 bits (453), Expect = 2e-43 Identities = 97/162 (59%), Positives = 114/162 (70%), Gaps = 3/162 (1%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGY D VS RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARILCLRLLTARSRTRAQLFGQLAKRGYADHVSERVLDRLAAVGLLDDNDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 RSR N GK KRALA +LR KG+D EVI++ LA +DPA ER+RAEQLVR +LRRE L Sbjct: 73 RSRRANVGKSKRALAADLRAKGIDSEVITTVLAGIDPAVERERAEQLVRTRLRREVLS-- 130 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 E+D +V+RRL+ MLARRGY+Q+ +VV ELA ERERRRV Sbjct: 131 -EDDARVSRRLMAMLARRGYSQTTICEVVVAELAAERERRRV 171 >sp|P0A5U8|RECX_MYCTU Tax_Id=1773 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium tuberculosis] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >sp|A5U688|RECX_MYCTA Tax_Id=419947 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium tuberculosis] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >sp|C1AFJ5|RECX_MYCBT Tax_Id=561275 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium bovis] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >sp|A1KM74|RECX_MYCBP Tax_Id=410289 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium bovis] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >sp|P0A5U9|RECX_MYCBO Tax_Id=1765 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium bovis] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|C6DLH2|C6DLH2_MYCTK Tax_Id=478434 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|A5WQY7|A5WQY7_MYCTF Tax_Id=336982 SubName: Full=RecA-regulating protein recX;[Mycobacterium tuberculosis] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D6G314|D6G314_MYCTU Tax_Id=478435 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis KZN 605] Length = 178 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 17 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 76 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 77 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 136 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 137 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 178 >tr|D6FNE2|D6FNE2_MYCTU Tax_Id=611304 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis K85] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D6FJV9|D6FJV9_MYCTU Tax_Id=611303 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis CPHL_A] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D6F7K2|D6F7K2_MYCTU Tax_Id=611302 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis T46] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D5ZJR4|D5ZJR4_MYCTU Tax_Id=537210 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis T17] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D5Z6R4|D5Z6R4_MYCTU Tax_Id=537209 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis GM 1503] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D5YUK7|D5YUK7_MYCTU Tax_Id=515616 SubName: Full=Recombination regulator RecX;[Mycobacterium tuberculosis 02_1987] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D5YI34|D5YI34_MYCTU Tax_Id=520140 SubName: Full=Recombination regulator RecX;[Mycobacterium tuberculosis EAS054] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|A4KK13|A4KK13_MYCTU Tax_Id=395095 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis str. Haarlem] Length = 174 Score = 175 bits (443), Expect = 3e-42 Identities = 93/162 (57%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|D5Y7L2|D5Y7L2_MYCTU Tax_Id=520141 SubName: Full=Recombination regulator RecX;[Mycobacterium tuberculosis T85] Length = 174 Score = 174 bits (440), Expect = 6e-42 Identities = 92/162 (56%), Positives = 112/162 (69%) Query: 27 REEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86 REEQA+ +C QL KRGYP+D+ RVLDRL +GL+DD DFAEQWV Sbjct: 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAALGLVDDTDFAEQWV 72 Query: 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGT 146 +SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L Sbjct: 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132 Query: 147 PENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188 ++ +V+RRLV MLARRGY Q++A +VV ELA ERERRRV Sbjct: 133 GTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174 >tr|A2VL73|A2VL73_MYCTU Tax_Id=348776 SubName: Full=Regulatory protein recX;[Mycobacterium tuberculosis C] Length = 174 Score = 168 bits (426), Expect = 2e-40 Identities = 87/137 (63%), Positives = 104/137 (75%) Query: 52 QLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDD 111 QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV+SR NA K KRALA EL KGVDD Sbjct: 38 QLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDD 97 Query: 112 EVISSALADLDPAAERQRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMA 171 +VI++ L +D AER RAE+LVR +LRRE L ++ +V+RRLV MLARRGY Q++A Sbjct: 98 DVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLA 157 Query: 172 YDVVSVELANERERRRV 188 +VV ELA ERERRRV Sbjct: 158 CEVVIAELAAERERRRV 174 >sp|B1MD16|RECX_MYCA9 Tax_Id=561007 (recX)RecName: Full=Regulatory protein recX;[Mycobacterium abscessus] Length = 204 Score = 167 bits (424), Expect = 4e-40 Identities = 91/181 (50%), Positives = 115/181 (63%), Gaps = 3/181 (1%) Query: 8 LTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVL 67 L + + VP+ + +R+EQA + C +L +RGYPDDVS R++ Sbjct: 26 LRARVASVPEAPTREPVDSRDEQAWSYCLRLLTSRARTRAELTERLARRGYPDDVSERIM 85 Query: 68 DRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAER 127 DRL GL++D DFA QWV+SRH +GKGKRALA ELR KGV E ++ALA +D AER Sbjct: 86 DRLATAGLVNDADFATQWVQSRHTYSGKGKRALAAELRTKGVSAENAAAALAQIDGEAER 145 Query: 128 QRAEQLVRDKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRR 187 RA +LV KLR E LD + +K RRLV MLARRGY QSMAYDVV LA+E++RR Sbjct: 146 SRAAELVTKKLRSENLD---DGGIKAARRLVAMLARRGYGQSMAYDVVKNALASEKDRRD 202 Query: 188 V 188 V Sbjct: 203 V 203 >tr|C0ZYM7|C0ZYM7_RHOE4 Tax_Id=234621 (recX)SubName: Full=Regulatory protein RecX;[Rhodococcus erythropolis] Length = 192 Score = 153 bits (387), Expect = 8e-36 Identities = 80/153 (52%), Positives = 103/153 (67%), Gaps = 4/153 (2%) Query: 28 EEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVR 87 E QAK+ C ET+L+ RG+ ++ +VLDRL E+GLIDD DFA QWV Sbjct: 39 EAQAKDACLRLLTDRARSRSELETKLSGRGFEPEIITKVLDRLQEIGLIDDADFANQWVH 98 Query: 88 SRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGTP 147 SRH +GKGKRALAVELR KG+D +V S AL+ +DP ER+RA +LVR KL+ + +D Sbjct: 99 SRHTYSGKGKRALAVELRLKGIDQDVASEALSQIDPEDERERAAELVRRKLKNKPVDDRD 158 Query: 148 ENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 KVTRRLV MLAR+GY+ M+Y+VV E+A Sbjct: 159 ----KVTRRLVSMLARKGYSAGMSYEVVKAEMA 187 >tr|C3JKB8|C3JKB8_RHOER Tax_Id=596309 (recX)SubName: Full=Regulatory protein RecX;[Rhodococcus erythropolis SK121] Length = 192 Score = 153 bits (387), Expect = 8e-36 Identities = 80/153 (52%), Positives = 103/153 (67%), Gaps = 4/153 (2%) Query: 28 EEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVR 87 E QAK+ C ET+L+ RG+ ++ A+VLDRL E+GLIDD DFA QWV Sbjct: 39 EAQAKDACLRLLTDRARSRSELETKLSGRGFEPEIIAKVLDRLQEIGLIDDADFANQWVH 98 Query: 88 SRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGTP 147 SRH +GKGKRALAVELR KG+D + S AL+ +DP ER+RA +LVR KL+ + +D Sbjct: 99 SRHTYSGKGKRALAVELRLKGIDQDTASEALSQIDPEDERERAAELVRRKLKNKPVDDRD 158 Query: 148 ENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 KVTRRLV MLAR+GY+ M+Y+VV E+A Sbjct: 159 ----KVTRRLVSMLARKGYSAGMSYEVVKAEMA 187 >tr|C1B382|C1B382_RHOOB Tax_Id=632772 (recX)SubName: Full=Regulatory protein RecX;[Rhodococcus opacus] Length = 171 Score = 139 bits (350), Expect = 2e-31 Identities = 75/152 (49%), Positives = 97/152 (63%), Gaps = 4/152 (2%) Query: 28 EEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVR 87 E QAK++C +L K+GY D++ RVLDRLTEVGL++D DFA+QWV Sbjct: 10 ETQAKDLCLRLLTDRARSRAELADRLAKKGYSADIAERVLDRLTEVGLVNDADFAQQWVH 69 Query: 88 SRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGTP 147 SRH ++GKGKRALA+ELR+KG+ E + ALA +D ER RA +LV KLR D Sbjct: 70 SRHTHSGKGKRALAMELRRKGIGQEDATEALAQIDSDDERARATELVAKKLRTVSADDRD 129 Query: 148 ENDVKVTRRLVGMLARRGYNQSMAYDVVSVEL 179 + RRLV MLARRG+ Q MA++VV +L Sbjct: 130 ----RAVRRLVSMLARRGFPQGMAFEVVKEQL 157 >tr|Q0S1P8|Q0S1P8_RHOSR Tax_Id=101510 (recX)SubName: Full=Regulatory protein RecX;[Rhodococcus sp.] Length = 171 Score = 137 bits (346), Expect = 5e-31 Identities = 74/152 (48%), Positives = 96/152 (63%), Gaps = 4/152 (2%) Query: 28 EEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVR 87 E QAK++C +L K+GY +++ RVLDRLTEVGL++D DFA+QWV Sbjct: 10 ETQAKDLCLRLLTDRARSRAELSERLAKKGYSAEIAERVLDRLTEVGLVNDADFAQQWVH 69 Query: 88 SRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGTP 147 SRH +GKGKRALA+ELR+KG+ E + ALA +D ER RA +LV KLR D Sbjct: 70 SRHTYSGKGKRALALELRRKGIGQEEATEALAQIDSEDERARATELVAKKLRTVSTDDRD 129 Query: 148 ENDVKVTRRLVGMLARRGYNQSMAYDVVSVEL 179 + RRLV MLARRG+ Q MA++VV +L Sbjct: 130 ----RAVRRLVSMLARRGFPQGMAFEVVKEQL 157 >tr|D5PML8|D5PML8_COREQ Tax_Id=525370 (recX)SubName: Full=Recombination regulator RecX;[Rhodococcus equi ATCC 33707] Length = 229 Score = 137 bits (345), Expect = 6e-31 Identities = 76/159 (47%), Positives = 97/159 (61%), Gaps = 2/159 (1%) Query: 24 PRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAE 83 P T +AK+VC E +L ++GYP V VLDRLTEV L+DD FAE Sbjct: 59 PETLAARAKDVCLRLLTDRARSRAELEQKLAQKGYPQAVIDTVLDRLTEVKLVDDAAFAE 118 Query: 84 QWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERL 143 QWV SRH +GKG+RALA ELR+KG+DD + AL+ + ER+RA +LVR KL R Sbjct: 119 QWVHSRHTYSGKGRRALATELRRKGIDDSTSNEALSQISADDERERAAELVRKKLLRTTS 178 Query: 144 DGTPEND--VKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 + D ++ RRLVGMLARRGY +++ VV ELA Sbjct: 179 ADIADRDDRERLMRRLVGMLARRGYPAGLSFAVVKAELA 217 >tr|C7MVD3|C7MVD3_SACVD Tax_Id=471857 SubName: Full=Uncharacterized conserved protein;[Saccharomonospora viridis] Length = 179 Score = 129 bits (324), Expect = 2e-28 Identities = 71/164 (43%), Positives = 94/164 (57%), Gaps = 4/164 (2%) Query: 16 PDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGL 75 P+ + P +AK VC L +RG+ DDVS R+L +L E GL Sbjct: 5 PEPTRELPPEEAWRKAKEVCFDLLAARPRTKEELRQALRRRGFADDVSERLLGKLDEAGL 64 Query: 76 IDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVR 135 +DD FAE WVRSRH + G +RAL +EL++KGVD E+ A +DP E +RA QLVR Sbjct: 65 VDDVAFAEMWVRSRHTHRGLARRALVMELKRKGVDPEIAVEAADAIDPEDEEERARQLVR 124 Query: 136 DKLRRERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVEL 179 KLR ++ K TRRL+G+LAR+GY Q ++Y VV EL Sbjct: 125 KKLRTM----VDVDEQKATRRLLGLLARKGYPQGLSYQVVREEL 164 >tr|A1SJ62|A1SJ62_NOCSJ Tax_Id=196162 SubName: Full=Regulatory protein RecX;[Nocardioides sp.] Length = 202 Score = 126 bits (316), Expect = 1e-27 Identities = 79/176 (44%), Positives = 100/176 (56%), Gaps = 10/176 (5%) Query: 7 RLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARV 66 R ++ P V DG A DP E A+ + +L R PD+V++R+ Sbjct: 27 RASAPPDPVADGPDA-DP---EAVARKILLDQLTGQARSRKELSDKLASRNVPDEVASRL 82 Query: 67 LDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAE 126 LDR EVGL+DD FA WV+SR N G +RALA ELR+KGV DEV AL ++DPA E Sbjct: 83 LDRFEEVGLVDDRAFARAWVQSRQPNKGLARRALAQELRRKGVADEVAREALDEVDPADE 142 Query: 127 RQRAEQLVRDKLRR-ERLDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELAN 181 A LVR KLR R+D T TRRLVG+LAR+GY +A+ VV ELA+ Sbjct: 143 EAAARALVRKKLRSLARVDET-----TATRRLVGLLARKGYGSGLAFAVVRDELAS 193 >tr|D3LQU5|D3LQU5_MICLU Tax_Id=596312 (recX)SubName: Full=Regulatory protein RecX; Flags: Fragment;[Micrococcus luteus SK58] Length = 323 Score = 124 bits (310), Expect = 7e-27 Identities = 80/187 (42%), Positives = 101/187 (54%), Gaps = 12/187 (6%) Query: 4 SRPRLTSEPSDVPDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVS 63 +RPR P+ +P DPR REE A+ V E +L R ++ Sbjct: 143 ARPRRRPGPAPLP-----ADPREREEAAREVVLRQLALGPRSRGQLEAKLADREAEPELI 197 Query: 64 ARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDP 123 ARVLDR EV L+DD FAE WVRSRH + G +RA+ ELR+KGVD +V + AL +D Sbjct: 198 ARVLDRFEEVRLVDDAAFAEVWVRSRHRSKGLARRAIGHELRQKGVDRDVAAEALEAIDG 257 Query: 124 AAERQRAEQLVRDKLRRERL------DGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSV 177 ER A +LVR +LR R+ D E D KVTRRLVGML R+GY +A+ VV Sbjct: 258 EDERAAALELVRRRLRGRRVPAGNGPDARAERD-KVTRRLVGMLGRKGYGGGLAFAVVKE 316 Query: 178 ELANERE 184 L E Sbjct: 317 VLGELEE 323 >tr|D5UMC4|D5UMC4_TSUPA Tax_Id=521096 SubName: Full=Regulatory protein RecX;[Tsukamurella paurometabola DSM 20162] Length = 198 Score = 121 bits (304), Expect = 3e-26 Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 2/161 (1%) Query: 16 PDGEQAQDPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGL 75 P+ + QDP RE A++V T+L ++G+ D+++ R+LD+ GL Sbjct: 28 PERQVEQDPAKREALARDVIYRALGTRDHSRGELRTKLARKGFDDELTERMLDKFAAAGL 87 Query: 76 IDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVR 135 +DD FA++WV SRH +G+G+RALA ELR KG+ + ++AL + E++RA +LV Sbjct: 88 VDDAAFAQRWVESRHRYSGRGRRALAQELRTKGIGEADAAAALETVSRDDEQERATELVE 147 Query: 136 DKLRRERL-DGTPENDVKVTRRLVGMLARRGYNQSMAYDVV 175 KL R + D E D K+T+RLVGMLARRGY+ S+A VV Sbjct: 148 RKLARVAIPDDRAERD-KLTQRLVGMLARRGYHPSLALSVV 187 >tr|C6WAA5|C6WAA5_ACTMD Tax_Id=446462 SubName: Full=Regulatory protein RecX;[Actinosynnema mirum] Length = 167 Score = 120 bits (301), Expect = 8e-26 Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 4/152 (2%) Query: 28 EEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVR 87 + +A ++C L ++G P++++ VL + GLIDD FAE WVR Sbjct: 4 QRRATDICYALLTARARTRVELRDALLRKGVPEEIAETVLGKFDRAGLIDDAAFAEVWVR 63 Query: 88 SRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGTP 147 SRH + G G+RALA ELR KGV DEV + A+A +D AER+RA +LVR KLR Sbjct: 64 SRHTHQGLGRRALARELRTKGVPDEVAAEAVAAVDDEAERERARELVRKKLRTL----AN 119 Query: 148 ENDVKVTRRLVGMLARRGYNQSMAYDVVSVEL 179 +D RRLVG LAR+GY + MAY VV EL Sbjct: 120 VDDTTRIRRLVGALARKGYAEGMAYGVVKEEL 151 >tr|C9NBE4|C9NBE4_9ACTO Tax_Id=591167 SubName: Full=Regulatory protein RecX;[Streptomyces flavogriseus ATCC 33331] Length = 230 Score = 120 bits (301), Expect = 8e-26 Identities = 77/183 (42%), Positives = 94/183 (51%), Gaps = 8/183 (4%) Query: 5 RPRLTSEPSDVPDGEQAQ--DPRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDV 62 R R S S P +A+ +PR EQA+N+C L K+ PD+ Sbjct: 44 RSRSRSRDSGSPSSSRAEKGEPRDPVEQARNICLRLLTGTPRTRKQLADALRKKEIPDEA 103 Query: 63 SARVLDRLTEVGLIDDEDFAEQWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLD 122 + VL R +VGLIDD FA+ WV SRH G +RAL ELR KGVD VI A+ LD Sbjct: 104 AEEVLSRFEDVGLIDDAAFADAWVESRHHGRGLARRALVRELRTKGVDPTVIDEAVGQLD 163 Query: 123 PAAERQRAEQLVRDKLRRER-LDGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELAN 181 P E + A +LV KLR R LD K RRL GMLAR+GY + MA VV + Sbjct: 164 PEQEEETARELVARKLRSTRGLDRD-----KRLRRLAGMLARKGYGEGMALRVVRQAIEA 218 Query: 182 ERE 184 E E Sbjct: 219 EGE 221 >tr|Q5YT02|Q5YT02_NOCFA Tax_Id=37329 (recX)SubName: Full=Putative RecX protein;[Nocardia farcinica] Length = 195 Score = 120 bits (300), Expect = 1e-25 Identities = 75/153 (49%), Positives = 89/153 (58%), Gaps = 7/153 (4%) Query: 29 EQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWVRS 88 EQAK C +L +GY +V+ L RL EVGLIDD FAEQWV S Sbjct: 31 EQAKEACLRLLAVRARSRAELAQRLAAKGYSAEVADAALARLAEVGLIDDAAFAEQWVAS 90 Query: 89 RHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERLDGTPE 148 RH +GKG++ALA ELR+KGV + +ALA + E+ RA +LVR KLR P Sbjct: 91 RHTYSGKGRQALAQELRRKGVAAADVDAALAAVSDDDEQARAAELVRRKLRT-----MPR 145 Query: 149 N--DVKVTRRLVGMLARRGYNQSMAYDVVSVEL 179 N KV RRLVGMLARRGY QS A+ VV EL Sbjct: 146 NLERNKVLRRLVGMLARRGYPQSTAFAVVKAEL 178 >tr|C4RDE1|C4RDE1_9ACTO Tax_Id=219305 SubName: Full=RecX-family transcriptional regulator;[Micromonospora sp. ATCC 39149] Length = 242 Score = 120 bits (300), Expect = 1e-25 Identities = 72/157 (45%), Positives = 86/157 (54%), Gaps = 5/157 (3%) Query: 24 PRTREEQAKNVCXXXXXXXXXXXXXXETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAE 83 PR E A+ +C +L KRG +VSA VLDR EVG++DD FA Sbjct: 58 PRDEAELAREICLRQLALRPRTRAELAAELAKRGISAEVSAEVLDRYDEVGIVDDAAFAR 117 Query: 84 QWVRSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERL 143 WV SRH G +RALA ELR++GVD EV S AL +LD E + A LV KLR R Sbjct: 118 AWVSSRHAGRGLARRALATELRRRGVDGEVASEALGELDEETEAETARVLVERKLRTAR- 176 Query: 144 DGTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELA 180 G P+ V RRLVGMLAR+GY +A V LA Sbjct: 177 -GEPD---AVFRRLVGMLARKGYPPGVAIRAVKDALA 209 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.313 0.130 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,353,113,655 Number of extensions: 48570912 Number of successful extensions: 121347 Number of sequences better than 10.0: 1097 Number of HSP's gapped: 123558 Number of HSP's successfully gapped: 1102 Length of query: 188 Length of database: 4,236,830,644 Length adjustment: 130 Effective length of query: 58 Effective length of database: 2,610,808,324 Effective search space: 151426882792 Effective search space used: 151426882792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 76 (33.9 bits)