BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_2735 (291 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0QVY0|DAPF_MYCS2 Tax_Id=246196 (dapF)RecName: Full=Diaminopi... 458 e-127 sp|A1UEZ9|DAPF_MYCSK Tax_Id=189918 (dapF)RecName: Full=Diaminopi... 363 2e-98 sp|A3PYF9|DAPF_MYCSJ Tax_Id=164757 (dapF)RecName: Full=Diaminopi... 363 2e-98 tr|Q1BA13|Q1BA13_MYCSS Tax_Id=164756 SubName: Full=Diaminopimela... 362 3e-98 sp|A1T7U8|DAPF_MYCVP Tax_Id=350058 (dapF)RecName: Full=Diaminopi... 350 9e-95 sp|P63897|DAPF_MYCTU Tax_Id=1773 (dapF)RecName: Full=Diaminopime... 340 1e-91 sp|A5U678|DAPF_MYCTA Tax_Id=419947 (dapF)RecName: Full=Diaminopi... 340 1e-91 sp|C1AFI5|DAPF_MYCBT Tax_Id=561275 (dapF)RecName: Full=Diaminopi... 340 1e-91 sp|A1KM64|DAPF_MYCBP Tax_Id=410289 (dapF)RecName: Full=Diaminopi... 340 1e-91 sp|P63898|DAPF_MYCBO Tax_Id=1765 (dapF)RecName: Full=Diaminopime... 340 1e-91 tr|C6DLI2|C6DLI2_MYCTK Tax_Id=478434 (dapF)RecName: Full=Diamino... 340 1e-91 tr|A5WQX7|A5WQX7_MYCTF Tax_Id=336982 (dapF)RecName: Full=Diamino... 340 1e-91 tr|D6G324|D6G324_MYCTU Tax_Id=478435 SubName: Full=Diaminopimela... 340 1e-91 tr|D6FND2|D6FND2_MYCTU Tax_Id=611304 SubName: Full=Diaminopimela... 340 1e-91 tr|D6FJU9|D6FJU9_MYCTU Tax_Id=611303 SubName: Full=Diaminopimela... 340 1e-91 tr|D6F7J2|D6F7J2_MYCTU Tax_Id=611302 SubName: Full=Diaminopimela... 340 1e-91 tr|D5ZJQ4|D5ZJQ4_MYCTU Tax_Id=537210 SubName: Full=Diaminopimela... 340 1e-91 tr|D5Z6Q4|D5Z6Q4_MYCTU Tax_Id=537209 SubName: Full=Diaminopimela... 340 1e-91 tr|D5YUJ7|D5YUJ7_MYCTU Tax_Id=515616 SubName: Full=Diaminopimela... 340 1e-91 tr|D5YKV6|D5YKV6_MYCTU Tax_Id=520140 SubName: Full=Diaminopimela... 340 1e-91 tr|D5Y7K3|D5Y7K3_MYCTU Tax_Id=520141 SubName: Full=Diaminopimela... 340 1e-91 tr|D5XX56|D5XX56_MYCTU Tax_Id=515617 SubName: Full=Diaminopimela... 340 1e-91 tr|A4KK04|A4KK04_MYCTU Tax_Id=395095 (dapF)RecName: Full=Diamino... 340 1e-91 tr|A2VL64|A2VL64_MYCTU Tax_Id=348776 (dapF)RecName: Full=Diamino... 340 1e-91 sp|A4TCN3|DAPF_MYCGI Tax_Id=350054 (dapF)RecName: Full=Diaminopi... 338 4e-91 sp|A0PT80|DAPF_MYCUA Tax_Id=362242 (dapF)RecName: Full=Diaminopi... 338 5e-91 sp|B2HL16|DAPF_MYCMM Tax_Id=216594 (dapF)RecName: Full=Diaminopi... 338 5e-91 sp|A0QIQ8|DAPF_MYCA1 Tax_Id=243243 (dapF)RecName: Full=Diaminopi... 328 6e-88 sp|Q73W21|DAPF_MYCPA Tax_Id=1770 (dapF)RecName: Full=Diaminopime... 327 1e-87 sp|P46814|DAPF_MYCLE Tax_Id=1769 (dapF)RecName: Full=Diaminopime... 322 3e-86 sp|B8ZQU1|DAPF_MYCLB Tax_Id=561304 (dapF)RecName: Full=Diaminopi... 322 3e-86 tr|D5PMK7|D5PMK7_COREQ Tax_Id=525370 (dapF)SubName: Full=Diamino... 296 2e-78 sp|Q0S1N7|DAPF_RHOSR Tax_Id=101510 (dapF)RecName: Full=Diaminopi... 294 8e-78 sp|C0ZYN8|DAPF_RHOE4 Tax_Id=234621 (dapF)RecName: Full=Diaminopi... 294 1e-77 tr|C3JKA7|C3JKA7_RHOER Tax_Id=596309 (dapF)RecName: Full=Diamino... 294 1e-77 sp|B1MD00|DAPF_MYCA9 Tax_Id=561007 (dapF)RecName: Full=Diaminopi... 293 2e-77 sp|C1B393|DAPF_RHOOB Tax_Id=632772 (dapF)RecName: Full=Diaminopi... 293 2e-77 tr|D5PJL6|D5PJL6_9MYCO Tax_Id=525368 (dapF2)SubName: Full=Diamin... 276 3e-72 tr|Q5YT14|Q5YT14_NOCFA Tax_Id=37329 (dapF)RecName: Full=Diaminop... 270 1e-70 tr|D5UMD7|D5UMD7_TSUPA Tax_Id=521096 SubName: Full=Diaminopimela... 268 8e-70 tr|C0E2L5|C0E2L5_9CORY Tax_Id=566549 SubName: Full=Putative unch... 244 1e-62 tr|C0WKR4|C0WKR4_9CORY Tax_Id=525260 (dapF)SubName: Full=Diamino... 242 3e-62 tr|C5VCL9|C5VCL9_9CORY Tax_Id=553207 (dapF)RecName: Full=Diamino... 242 5e-62 tr|Q6NGR6|Q6NGR6_CORDI Tax_Id=1717 (dapF)RecName: Full=Diaminopi... 241 8e-62 tr|D0LBP8|D0LBP8_GORB4 Tax_Id=526226 (dapF)RecName: Full=Diamino... 239 4e-61 >sp|A0QVY0|DAPF_MYCS2 Tax_Id=246196 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium smegmatis] Length = 291 Score = 458 bits (1179), Expect = e-127 Identities = 235/291 (80%), Positives = 235/291 (80%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGAD F Sbjct: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADGVLRVTRAGAARAAGVF 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV Sbjct: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVGITXXXXX 180 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVGIT Sbjct: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVGITADDLA 180 Query: 181 XXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXXXX 240 PVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSC Sbjct: 181 ALDVAAPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCGTGTVAATVAALA 240 Query: 241 XXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAVAG 291 TGTLRVRIPGG YLRGPSVLVARGELDPHWWHAVAG Sbjct: 241 HDGADTGTLRVRIPGGEVTVTVTESTSYLRGPSVLVARGELDPHWWHAVAG 291 >sp|A1UEZ9|DAPF_MYCSK Tax_Id=189918 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium sp.] Length = 293 Score = 363 bits (931), Expect = 2e-98 Identities = 189/290 (65%), Positives = 203/290 (70%), Gaps = 2/290 (0%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M FAKGHGT+NDFV+LPDLDA L+LTP+ V+ALCDRRRGLGAD F Sbjct: 1 MQFAKGHGTQNDFVLLPDLDARLALTPAVVSALCDRRRGLGADGVLRVTTAKAALSAGVF 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 +RLP+GV AGDWYMDYRNADGSIAQMCGNGVRVFAHYLRA+ LES DEFVVGSLAGPRPV Sbjct: 61 ERLPEGVGAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRAADLESRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 VLHGFD A + AEVTVEMGK N G+GSAVVGGR F GL +DVGNPHLACV +T Sbjct: 121 VLHGFDLAHRSRAEVTVEMGKVNLLGSGSAVVGGRRFTGLGIDVGNPHLACVDTTLTEAE 180 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PV FDPA FPDGVNVEVLTA DGAVSMRVHERGVGETRSC Sbjct: 181 LAALDVAAPVDFDPAQFPDGVNVEVLTALRDGAVSMRVHERGVGETRSCGTGTVAAAVAA 240 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHA 288 GTL VRIPGG +LRGPS LVA GEL WW + Sbjct: 241 LAQEGAAVGTLDVRIPGGVVTVSVTDTTSFLRGPSELVATGELAGEWWQS 290 >sp|A3PYF9|DAPF_MYCSJ Tax_Id=164757 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium sp.] Length = 293 Score = 363 bits (931), Expect = 2e-98 Identities = 189/290 (65%), Positives = 203/290 (70%), Gaps = 2/290 (0%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M FAKGHGT+NDFV+LPDLDA L+LTP+ V+ALCDRRRGLGAD F Sbjct: 1 MQFAKGHGTQNDFVLLPDLDARLALTPAVVSALCDRRRGLGADGVLRVTTAKAALSAGVF 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 +RLP+GV AGDWYMDYRNADGSIAQMCGNGVRVFAHYLRA+ LES DEFVVGSLAGPRPV Sbjct: 61 ERLPEGVGAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRAADLESRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 VLHGFD A + AEVTVEMGK N G+GSAVVGGR F GL +DVGNPHLACV +T Sbjct: 121 VLHGFDLAHRSRAEVTVEMGKVNLLGSGSAVVGGRRFTGLGIDVGNPHLACVDTTLTEAE 180 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PV FDPA FPDGVNVEVLTA DGAVSMRVHERGVGETRSC Sbjct: 181 LAALDVAAPVDFDPAQFPDGVNVEVLTALRDGAVSMRVHERGVGETRSCGTGTVAAAVAA 240 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHA 288 GTL VRIPGG +LRGPS LVA GEL WW + Sbjct: 241 LAQEGAAVGTLDVRIPGGVVTVSVTDTTSFLRGPSELVATGELAGEWWQS 290 >tr|Q1BA13|Q1BA13_MYCSS Tax_Id=164756 SubName: Full=Diaminopimelate epimerase; EC=5.1.1.7;[Mycobacterium sp.] Length = 313 Score = 362 bits (929), Expect = 3e-98 Identities = 188/288 (65%), Positives = 202/288 (70%), Gaps = 2/288 (0%) Query: 3 FAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXFDR 62 FAKGHGT+NDFV+LPDLDA L+LTP+ V+ALCDRRRGLGAD F+R Sbjct: 23 FAKGHGTQNDFVLLPDLDARLALTPAVVSALCDRRRGLGADGVLRVTTAKAALSAGVFER 82 Query: 63 LPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPVVL 122 LP+GV AGDWYMDYRNADGSIAQMCGNGVRVFAHYLRA+ LES DEFVVGSLAGPRPVVL Sbjct: 83 LPEGVGAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRAADLESRDEFVVGSLAGPRPVVL 142 Query: 123 HGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXXXX 180 HGFD A + AEVTVEMGK N G+GSAVVGGR F GL +DVGNPHLACV +T Sbjct: 143 HGFDLAHRSRAEVTVEMGKVNLLGSGSAVVGGRRFTGLGIDVGNPHLACVDTTLTEAELA 202 Query: 181 XXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXXXX 240 PV FDPA FPDGVNVEVLTA DGAVSMRVHERGVGETRSC Sbjct: 203 ALDVAAPVDFDPAQFPDGVNVEVLTALRDGAVSMRVHERGVGETRSCGTGTVAAAVAALA 262 Query: 241 XXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHA 288 GTL VRIPGG +LRGPS LVA GEL WW + Sbjct: 263 QEGAAVGTLDVRIPGGVVTVSVTDTTSFLRGPSELVATGELAGEWWQS 310 >sp|A1T7U8|DAPF_MYCVP Tax_Id=350058 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium vanbaalenii] Length = 289 Score = 350 bits (899), Expect = 9e-95 Identities = 187/290 (64%), Positives = 201/290 (69%), Gaps = 5/290 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M FAKGHGT+NDFV+LPDL A L+LTP+AVAALCDRR+GLGAD F Sbjct: 1 MKFAKGHGTQNDFVLLPDLTADLALTPAAVAALCDRRQGLGADGVLRVTTAGAARAAGVF 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 DRLP+GV GDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLES DEFVVGSLAGPRPV Sbjct: 61 DRLPEGVVEGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXX 178 VL+ A+VTVEMGKANQ G G+A VGGR F+GLAVDVGNPHLACV ++ Sbjct: 121 VLNAL---AGVGADVTVEMGKANQLGVGAATVGGRQFNGLAVDVGNPHLACVDAAMSSRE 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PV FD A FPDGVNVEVLTA DGAVSMRVHERGVGETRSC Sbjct: 178 LAALDVAAPVVFDAAQFPDGVNVEVLTAPEDGAVSMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHA 288 TG+L VRIPGG YLRGPSVLVA G+L WW A Sbjct: 238 LAHQGSQTGSLTVRIPGGEVVVTITDANSYLRGPSVLVAHGDLADEWWAA 287 >sp|P63897|DAPF_MYCTU Tax_Id=1773 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium tuberculosis] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >sp|A5U678|DAPF_MYCTA Tax_Id=419947 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium tuberculosis] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >sp|C1AFI5|DAPF_MYCBT Tax_Id=561275 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium bovis] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >sp|A1KM64|DAPF_MYCBP Tax_Id=410289 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium bovis] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >sp|P63898|DAPF_MYCBO Tax_Id=1765 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium bovis] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|C6DLI2|C6DLI2_MYCTK Tax_Id=478434 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium tuberculosis] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|A5WQX7|A5WQX7_MYCTF Tax_Id=336982 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium tuberculosis] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D6G324|D6G324_MYCTU Tax_Id=478435 SubName: Full=Diaminopimelate epimerase dapF;[Mycobacterium tuberculosis KZN 605] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D6FND2|D6FND2_MYCTU Tax_Id=611304 SubName: Full=Diaminopimelate epimerase dapF;[Mycobacterium tuberculosis K85] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D6FJU9|D6FJU9_MYCTU Tax_Id=611303 SubName: Full=Diaminopimelate epimerase dapF;[Mycobacterium tuberculosis CPHL_A] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTITDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D6F7J2|D6F7J2_MYCTU Tax_Id=611302 SubName: Full=Diaminopimelate epimerase;[Mycobacterium tuberculosis T46] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D5ZJQ4|D5ZJQ4_MYCTU Tax_Id=537210 SubName: Full=Diaminopimelate epimerase dapF;[Mycobacterium tuberculosis T17] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D5Z6Q4|D5Z6Q4_MYCTU Tax_Id=537209 SubName: Full=Diaminopimelate epimerase dapF;[Mycobacterium tuberculosis GM 1503] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D5YUJ7|D5YUJ7_MYCTU Tax_Id=515616 SubName: Full=Diaminopimelate epimerase dapF;[Mycobacterium tuberculosis 02_1987] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D5YKV6|D5YKV6_MYCTU Tax_Id=520140 SubName: Full=Diaminopimelate epimerase;[Mycobacterium tuberculosis EAS054] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D5Y7K3|D5Y7K3_MYCTU Tax_Id=520141 SubName: Full=Diaminopimelate epimerase;[Mycobacterium tuberculosis T85] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|D5XX56|D5XX56_MYCTU Tax_Id=515617 SubName: Full=Diaminopimelate epimerase dapF;[Mycobacterium tuberculosis T92] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|A4KK04|A4KK04_MYCTU Tax_Id=395095 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium tuberculosis str. Haarlem] Length = 289 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 61 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 121 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 238 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 288 >tr|A2VL64|A2VL64_MYCTU Tax_Id=348776 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium tuberculosis C] Length = 292 Score = 340 bits (872), Expect = 1e-91 Identities = 181/291 (62%), Positives = 198/291 (68%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+DA L LT + VAALCDRR+GLGAD Sbjct: 4 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 63 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 D LP+GV DWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE DEFVVGSLAGPRPV Sbjct: 64 DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 123 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 H + A A+V+V+MGKAN+ GAG AVVGGR F GLAVDVGNPHLACV +T Sbjct: 124 TCHHVE---AAYADVSVDMGKANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQLTVDG 180 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FPDGVNVEVLTA VDGAV MRVHERGVGETRSC Sbjct: 181 LAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAA 240 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TGTL V +PGG +LRGPSVLVARG+L WW+A+ Sbjct: 241 LAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAM 291 >sp|A4TCN3|DAPF_MYCGI Tax_Id=350054 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium gilvum] Length = 289 Score = 338 bits (868), Expect = 4e-91 Identities = 181/290 (62%), Positives = 196/290 (67%), Gaps = 5/290 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M FAKGHGT+NDFV+LPDL+A SLT AVAALCDRRRGLGAD F Sbjct: 1 MKFAKGHGTQNDFVLLPDLNAQYSLTARAVAALCDRRRGLGADGLLRVTTAGAALAAGVF 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 DRLP+GV+ DW+MDYRNADGSIA+MCGNGVRVFAHYL A GLE EFVVGSLAGPRPV Sbjct: 61 DRLPEGVAEDDWFMDYRNADGSIAEMCGNGVRVFAHYLHAGGLEHRSEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 VLH D TTA+VTVEMGKA + G G+A VGGR F GLAVDVGNPHLACV +T Sbjct: 121 VLHEADD---TTADVTVEMGKAVRCGTGTATVGGRRFSGLAVDVGNPHLACVDEELTDAG 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PV+FD FP GVNVE+LTA DGAV+MRVHERGVGETRSC Sbjct: 178 LASLDVASPVAFDSTQFPHGVNVEILTAPRDGAVAMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHA 288 TGTLRVRIPGG YLRGPSVL+A GEL WW A Sbjct: 238 LDHQGARTGTLRVRIPGGEVCVTVTETDSYLRGPSVLLAHGELAEQWWAA 287 >sp|A0PT80|DAPF_MYCUA Tax_Id=362242 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium ulcerans] Length = 290 Score = 338 bits (867), Expect = 5e-91 Identities = 180/288 (62%), Positives = 194/288 (67%), Gaps = 5/288 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+ A LSLT + VAALCDRRRGLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVAARLSLTAAQVAALCDRRRGLGADGILRVTTADAAVAAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 RLPDGVS GDWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE+ DEFVVGSLAGPRPV Sbjct: 61 HRLPDGVSPGDWYMDYRNADGSTAQMCGNGVRVFAHYLRASGLETRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXX 178 +H D T A+VTV+MGKAN+ G G AVVGGR G+AVDVGNPHLAC+ G+T Sbjct: 121 TVHHAD---QTHADVTVDMGKANKLGPGEAVVGGRRLSGVAVDVGNPHLACLDPGLTPEQ 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FP+GVNVEVLTA G V MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDHAQFPEGVNVEVLTARAAGVVCMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWW 286 TGTL VRIPGG LRGPSVLVA GE+ WW Sbjct: 238 LASAGQETGTLTVRIPGGDVTVNITDATSLLRGPSVLVASGEISEEWW 285 >sp|B2HL16|DAPF_MYCMM Tax_Id=216594 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium marinum] Length = 290 Score = 338 bits (867), Expect = 5e-91 Identities = 180/288 (62%), Positives = 194/288 (67%), Gaps = 5/288 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFV+LPD+ A LSLT + VAALCDRRRGLGAD Sbjct: 1 MIFAKGHGTQNDFVLLPDVAARLSLTAAQVAALCDRRRGLGADGILRVTTADAAVAAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 RLPDGVS GDWYMDYRNADGS AQMCGNGVRVFAHYLRASGLE+ DEFVVGSLAGPRPV Sbjct: 61 HRLPDGVSPGDWYMDYRNADGSTAQMCGNGVRVFAHYLRASGLETRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXX 178 +H D T A+VTV+MGKAN+ G G AVVGGR G+AVDVGNPHLAC+ G+T Sbjct: 121 TVHHAD---QTHADVTVDMGKANKLGPGEAVVGGRRLSGVAVDVGNPHLACLDPGLTPEQ 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PVSFD A FP+GVNVEVLTA G V MRVHERGVGETRSC Sbjct: 178 LAALDVGAPVSFDHAQFPEGVNVEVLTAPAAGVVCMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWW 286 TGTL VRIPGG LRGPSVLVA GE+ WW Sbjct: 238 LASAGQETGTLTVRIPGGDVTVNITDATSLLRGPSVLVASGEISEEWW 285 >sp|A0QIQ8|DAPF_MYCA1 Tax_Id=243243 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium avium] Length = 294 Score = 328 bits (840), Expect = 6e-88 Identities = 176/292 (60%), Positives = 192/292 (65%), Gaps = 9/292 (3%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M FAKGHGTENDFV+L D A L LT + VAALCDRRRGLGAD Sbjct: 1 MKFAKGHGTENDFVLLCDTPAELRLTAAGVAALCDRRRGLGADGVLRVTTAGAAAAAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 DRLPDGV+ DWYMDYRN+DGS+AQMCGNGVRVFAHYLRASGLE+ DEFVVGSLAGPRPV Sbjct: 61 DRLPDGVAGDDWYMDYRNSDGSVAQMCGNGVRVFAHYLRASGLETRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAG----SAVVGGRSFDGLAVDVGNPHLACVG--I 174 +H D AT A+V+V+MGKAN G+G A VGGR F GLAVDVGNPHLAC+ + Sbjct: 121 TVHAAD---ATGADVSVDMGKANTLGSGGKAFEATVGGRRFAGLAVDVGNPHLACLDPEL 177 Query: 175 TXXXXXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXX 234 + PVSFD A FPDGVNVEVLTA G V MRVHERGVGETRSC Sbjct: 178 SVDELAALDVAAPVSFDAAQFPDGVNVEVLTAPAAGVVHMRVHERGVGETRSCGTGTVAA 237 Query: 235 XXXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWW 286 TGTL VR+PGG YLRGPSVLVA GE+ WW Sbjct: 238 AVAALTAAGADTGTLTVRVPGGDVVVTVTDATSYLRGPSVLVAHGEISEEWW 289 >sp|Q73W21|DAPF_MYCPA Tax_Id=1770 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium paratuberculosis] Length = 294 Score = 327 bits (838), Expect = 1e-87 Identities = 176/292 (60%), Positives = 191/292 (65%), Gaps = 9/292 (3%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M FAKGHGTENDFV+L D A L LT + VAALCDRRRGLGAD Sbjct: 1 MKFAKGHGTENDFVLLCDPPAELRLTGAGVAALCDRRRGLGADGVLRVTAAAAAAAAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 DRLPDGV+ DWYMDYRNADGS+AQMCGNGVRVFAHYLRASGLE+ DEFVVGSLAGPRPV Sbjct: 61 DRLPDGVAGDDWYMDYRNADGSVAQMCGNGVRVFAHYLRASGLETRDEFVVGSLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAG----SAVVGGRSFDGLAVDVGNPHLACVG--I 174 +H D AT A+V+V+MGKAN G G A VGGR F GLAVDVGNPHLAC+ + Sbjct: 121 TVHAAD---ATGADVSVDMGKANTLGGGGEAFEATVGGRRFAGLAVDVGNPHLACLDPEL 177 Query: 175 TXXXXXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXX 234 + PVSFD A FPDGVN+EVLTA G V MRVHERGVGETRSC Sbjct: 178 SVDELAALDVAAPVSFDAAQFPDGVNIEVLTAPAAGVVHMRVHERGVGETRSCGTGTVAA 237 Query: 235 XXXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWW 286 TGTL VR+PGG YLRGPSVLVA GE+ WW Sbjct: 238 VVAALAAAGADTGTLTVRVPGGDVVVTVTDATSYLRGPSVLVAHGEISEEWW 289 >sp|P46814|DAPF_MYCLE Tax_Id=1769 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium leprae] Length = 296 Score = 322 bits (825), Expect = 3e-86 Identities = 171/296 (57%), Positives = 195/296 (65%), Gaps = 9/296 (3%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFVVLPD++A ++ T + VAALC+RR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVVLPDVEADVTFTAAQVAALCNRRQGLGADGVLRVTTAGAAVTAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 + LPDGVS DWYMDYRNADGS+AQMCGNGVRVFAHYLRASGLES DEFVVGSLAGPR V Sbjct: 61 EHLPDGVSCSDWYMDYRNADGSVAQMCGNGVRVFAHYLRASGLESCDEFVVGSLAGPRLV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAG----SAVVGGRSFDGLAVDVGNPHLACVG--I 174 +H D A+VTV+MGKAN G+G + VGGR F G+AVDVGNPHLAC+ + Sbjct: 121 NVHHVD---ELNADVTVDMGKANLLGSGGPAFAVTVGGRRFSGVAVDVGNPHLACMDPQL 177 Query: 175 TXXXXXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXX 234 + PV D FPDGVN+EVLTA VDG V MRVHERGVGETRSC Sbjct: 178 SLEELAALDLGAPVHLDRVQFPDGVNIEVLTAPVDGMVQMRVHERGVGETRSCGTGTVAA 237 Query: 235 XXXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAVA 290 TGTL VR+PGG YLRGPSVLVA GEL WW+++A Sbjct: 238 AVAALASAGADTGTLTVRVPGGDVVITITDVTSYLRGPSVLVAHGELADAWWYSLA 293 >sp|B8ZQU1|DAPF_MYCLB Tax_Id=561304 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium leprae] Length = 296 Score = 322 bits (825), Expect = 3e-86 Identities = 171/296 (57%), Positives = 195/296 (65%), Gaps = 9/296 (3%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 MIFAKGHGT+NDFVVLPD++A ++ T + VAALC+RR+GLGAD Sbjct: 1 MIFAKGHGTQNDFVVLPDVEADVTFTAAQVAALCNRRQGLGADGVLRVTTAGAAVTAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 + LPDGVS DWYMDYRNADGS+AQMCGNGVRVFAHYLRASGLES DEFVVGSLAGPR V Sbjct: 61 EHLPDGVSCSDWYMDYRNADGSVAQMCGNGVRVFAHYLRASGLESCDEFVVGSLAGPRLV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAG----SAVVGGRSFDGLAVDVGNPHLACVG--I 174 +H D A+VTV+MGKAN G+G + VGGR F G+AVDVGNPHLAC+ + Sbjct: 121 NVHHVD---ELNADVTVDMGKANLLGSGGPAFAVTVGGRRFSGVAVDVGNPHLACMDPQL 177 Query: 175 TXXXXXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXX 234 + PV D FPDGVN+EVLTA VDG V MRVHERGVGETRSC Sbjct: 178 SLEELAALDLGAPVHLDRVQFPDGVNIEVLTAPVDGMVQMRVHERGVGETRSCGTGTVAA 237 Query: 235 XXXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAVA 290 TGTL VR+PGG YLRGPSVLVA GEL WW+++A Sbjct: 238 AVAALASAGADTGTLTVRVPGGDVVITITDVTSYLRGPSVLVAHGELADAWWYSLA 293 >tr|D5PMK7|D5PMK7_COREQ Tax_Id=525370 (dapF)SubName: Full=Diaminopimelate epimerase; EC=5.1.1.7;[Rhodococcus equi ATCC 33707] Length = 289 Score = 296 bits (758), Expect = 2e-78 Identities = 153/288 (53%), Positives = 178/288 (61%), Gaps = 5/288 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M F+KGHGTENDFV+LPD DA L+L VAALCDRRRGLGAD Sbjct: 1 MEFSKGHGTENDFVILPDPDADLALPAHRVAALCDRRRGLGADGLLRVARAGALAAVGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 LP+GV A DW+MDYRN DGSIA++CGNGVRVFAHYLRA+GLE DEFVVGS AG RPV Sbjct: 61 PELPEGVGADDWFMDYRNGDGSIAEICGNGVRVFAHYLRATGLELRDEFVVGSRAGARPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXX 178 +H D +VTV+MG+ + G +A VGGR +G+ +DVGNPHLACV +T Sbjct: 121 HVHSADHVH---GDVTVDMGRVRELGTSTATVGGRVLEGIGIDVGNPHLACVDPDLTPAS 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 FDP FP+GVN+E+LTA VDGAV MRVHERGVGETRSC Sbjct: 178 LASLDLTAAPGFDPGFFPEGVNIEILTALVDGAVQMRVHERGVGETRSCGTGTVAAAVAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWW 286 G + VR+PGG LRGPS+LVA G +D WW Sbjct: 238 LRAHGDADGKVEVRVPGGRVEVSVDGGRAALRGPSMLVAAGRIDDRWW 285 >sp|Q0S1N7|DAPF_RHOSR Tax_Id=101510 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Rhodococcus sp.] Length = 289 Score = 294 bits (753), Expect = 8e-78 Identities = 156/292 (53%), Positives = 178/292 (60%), Gaps = 5/292 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M F+KGHGTENDFVVLPD D + L+ VAALCDRRRGLGAD Sbjct: 1 MDFSKGHGTENDFVVLPDPDVRIDLSAPRVAALCDRRRGLGADGILRVAKAGALAGAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 LPDG S DW+MDYRNADGSIA+MCGNGVRVFAHYLRA+GLES DEFVVGS AG +PV Sbjct: 61 AELPDGTSEDDWFMDYRNADGSIAEMCGNGVRVFAHYLRAAGLESRDEFVVGSRAGGKPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 ++H D A EVTV+MG G +A + G+ F+G+ +DVGNPHLACV +T Sbjct: 121 IVHSADGA---FGEVTVDMGVVRDLGTSAATIDGKVFNGIGIDVGNPHLACVDAHLTAAS 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 FDP FP GVNVE+LT GAV MRVHERGVGETRSC Sbjct: 178 LSALDLTAAPGFDPGFFPHGVNVEILTRIDSGAVDMRVHERGVGETRSCGTGTVAAATAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAVA 290 +G + VRIPGG LRGPSVLVA G LD WW+ +A Sbjct: 238 LRFDGADSGEVNVRIPGGQVTVAVSGGRATLRGPSVLVASGTLDDGWWNGLA 289 >sp|C0ZYN8|DAPF_RHOE4 Tax_Id=234621 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Rhodococcus erythropolis] Length = 292 Score = 294 bits (752), Expect = 1e-77 Identities = 153/291 (52%), Positives = 180/291 (61%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M F+KGHGT+NDFVVLPDLD + L P+ V+ALCDR+RGLGAD Sbjct: 4 MDFSKGHGTQNDFVVLPDLDVRVDLEPARVSALCDRQRGLGADGILRVARAGALADAGVL 63 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 LPDGV+A DW+MDYRN+DGSIA+MCGNGVRVFAHYL+ASGLES DEFVVGS AG RPV Sbjct: 64 GALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYLKASGLESKDEFVVGSRAGARPV 123 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 V+HG+D AT +VTV MG G SA + GR F G+ +DVGNPHLACV +T Sbjct: 124 VVHGYD---ATHGDVTVAMGPIKDLGTSSATIDGRVFAGVGIDVGNPHLACVDEHVTAEV 180 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 FDP FP GVN+E++T DG V MRVHERGVGETRSC Sbjct: 181 LSALDLSVSPGFDPGFFPHGVNIEIVTPIHDGGVHMRVHERGVGETRSCGTGTVAAAAAA 240 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 G++ VR+ GG LRGPSVLVA G + WW ++ Sbjct: 241 LKFDGRDEGSVLVRVLGGEVQVTVEGGEGSLRGPSVLVANGTISDAWWQSL 291 >tr|C3JKA7|C3JKA7_RHOER Tax_Id=596309 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Rhodococcus erythropolis SK121] Length = 289 Score = 294 bits (752), Expect = 1e-77 Identities = 153/291 (52%), Positives = 180/291 (61%), Gaps = 5/291 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M F+KGHGT+NDFVVLPDLD + L P+ V+ALCDR+RGLGAD Sbjct: 1 MDFSKGHGTQNDFVVLPDLDVRIDLEPARVSALCDRQRGLGADGILRVARAGALADAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 LPDGV+A DW+MDYRN+DGSIA+MCGNGVRVFAHYL+ASGLES DEFVVGS AG RPV Sbjct: 61 GALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYLKASGLESKDEFVVGSRAGARPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 V+HG+D AT +VTV MG G SA + GR F G+ +DVGNPHLACV +T Sbjct: 121 VVHGYD---ATHGDVTVAMGTIKDLGTSSATIDGRVFAGVGIDVGNPHLACVDEHVTPEV 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 FDP FP GVN+E++T DG V MRVHERGVGETRSC Sbjct: 178 LSSLDLSVSPGFDPGFFPHGVNIEIVTPIHDGGVHMRVHERGVGETRSCGTGTVAAAAAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 G++ VR+ GG LRGPSVLVA G + WW ++ Sbjct: 238 LRYDGRDEGSVLVRVLGGEVQVTVEGGKGSLRGPSVLVASGTISDAWWQSL 288 >sp|B1MD00|DAPF_MYCA9 Tax_Id=561007 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Mycobacterium abscessus] Length = 295 Score = 293 bits (750), Expect = 2e-77 Identities = 158/294 (53%), Positives = 183/294 (62%), Gaps = 8/294 (2%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M F KGHGT+NDFVVLPD+ L+ +AV ALCDR+RGLGAD Sbjct: 1 MKFTKGHGTQNDFVVLPDVHIKRDLSVAAVQALCDRQRGLGADGVLRVTTVGAALEGGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 P GVS+ DW+MDYRNADGSIA+MCGNGVRVFAHYLR+ GLE DEFVV SLAGPRPV Sbjct: 61 AEKPAGVSSEDWFMDYRNADGSIAEMCGNGVRVFAHYLRSVGLEHRDEFVVASLAGPRPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 ++ + TA+VTV+MG +FGAG A+VGGR F GLA+DVGNPHLACV +T Sbjct: 121 RINSWS---QLTADVTVDMGPVKEFGAGEAIVGGRRFSGLAIDVGNPHLACVDAVLTTEQ 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDG---AVSMRVHERGVGETRSCXXXXXXXX 235 PV+FD LFPDGVNVEVLTA G V MRVHERGVGETRSC Sbjct: 178 LRILDVGAPVTFDEQLFPDGVNVEVLTAPSAGPANTVHMRVHERGVGETRSCGTGTVAAA 237 Query: 236 XXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 TG + V IPGG +LRGPS+L+A GE+ WW + Sbjct: 238 YAALRHIGQRTGEVVVNIPGGQVRVTVTGESSFLRGPSMLLADGEISDEWWGGI 291 >sp|C1B393|DAPF_RHOOB Tax_Id=632772 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Rhodococcus opacus] Length = 289 Score = 293 bits (749), Expect = 2e-77 Identities = 152/292 (52%), Positives = 179/292 (61%), Gaps = 5/292 (1%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M F+KGHGTENDFVVLPD D + L+ VAALCDRRRGLGAD Sbjct: 1 MDFSKGHGTENDFVVLPDPDVRIDLSAPRVAALCDRRRGLGADGILRVAKAGALAAAGVL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 LPDG S DW+MDYRNADGSIA+MCGNGVRVFAHYLR++GLE+ DEFVVGS AG +PV Sbjct: 61 AELPDGTSEDDWFMDYRNADGSIAEMCGNGVRVFAHYLRSTGLETRDEFVVGSRAGGKPV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVG--ITXXX 178 ++H D + EVTV+MG G +A + G+ F+G+ +DVGNPHLACV +T Sbjct: 121 IVHSAD---GSAGEVTVDMGVVRDLGTSAATIDGKVFNGIGIDVGNPHLACVDAHLTAAS 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 FDP FP GVNVE+LT GAV MRVHERGVGETRSC Sbjct: 178 LSALDLTAAPGFDPGFFPHGVNVEILTRIDSGAVDMRVHERGVGETRSCGTGTVAAATAA 237 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAVA 290 +G ++VRIPGG LRGPSVLVA G LD WW+ ++ Sbjct: 238 LRFDGADSGEVKVRIPGGQVTVALSGGRATLRGPSVLVASGNLDDSWWNGLS 289 >tr|D5PJL6|D5PJL6_9MYCO Tax_Id=525368 (dapF2)SubName: Full=Diaminopimelate epimerase; EC=5.1.1.7;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 255 Score = 276 bits (705), Expect = 3e-72 Identities = 148/255 (58%), Positives = 161/255 (63%), Gaps = 9/255 (3%) Query: 40 LGADXXXXXXXXXXXXXXXXFDRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLR 99 +GAD DRLPDGV+ GDWYMDYRNADGSIAQMCGNGVRVFAHYLR Sbjct: 1 MGADGVLRVTTAGAALSAGVLDRLPDGVAPGDWYMDYRNADGSIAQMCGNGVRVFAHYLR 60 Query: 100 ASGLESADEFVVGSLAGPRPVVLHGFDPARATTAEVTVEMGKANQFGAG----SAVVGGR 155 ASG+E DEFVV S AGPRPV +H D AT A++TV+MGKAN G+G A VGGR Sbjct: 61 ASGMEGRDEFVVASAAGPRPVTVHRAD---ATRADITVDMGKANTLGSGGPAFEATVGGR 117 Query: 156 SFDGLAVDVGNPHLACV--GITXXXXXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVS 213 F GL VDVGNPHLACV +T PVSFD A FP+GVN+EVLTA DGAV Sbjct: 118 RFAGLGVDVGNPHLACVDPALTADDLAGLDVAAPVSFDHAQFPEGVNIEVLTAPADGAVR 177 Query: 214 MRVHERGVGETRSCXXXXXXXXXXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPS 273 MRVHERGVGETRSC TGTL VR+PGG YLRGPS Sbjct: 178 MRVHERGVGETRSCGTGTVAAAVAALAAAGTDTGTLAVRVPGGEVVVTVTDATSYLRGPS 237 Query: 274 VLVARGELDPHWWHA 288 VLVA GE+ WW A Sbjct: 238 VLVAHGEVSGEWWDA 252 >tr|Q5YT14|Q5YT14_NOCFA Tax_Id=37329 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Nocardia farcinica] Length = 302 Score = 270 bits (691), Expect = 1e-70 Identities = 152/294 (51%), Positives = 170/294 (57%), Gaps = 10/294 (3%) Query: 3 FAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXFDR 62 F KGHGTENDFVVLPD D L LTP+ VAALCDR+RGLGAD D Sbjct: 11 FTKGHGTENDFVVLPDEDVRLDLTPARVAALCDRQRGLGADGVLRVARAGALLRAGVLDA 70 Query: 63 LPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPVVL 122 LP GVS DW+MDYRNADGSIA+MCGNGVRVFAHYL A+G E VVGS AG RPV + Sbjct: 71 LPAGVSDTDWFMDYRNADGSIAEMCGNGVRVFAHYLAATGRAEGTEHVVGSRAGARPVTV 130 Query: 123 HGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACVGITXXXXXXX 182 H P T EVTV MG+ GA +A V G + GL +DVGNPHLACV T Sbjct: 131 HAAGP---THGEVTVAMGEVRALGASTATVAGWGYSGLGIDVGNPHLACVDPTLTAEALA 187 Query: 183 XXXXPVS--FDPALFPDGVNVEVLT-ASVDGAVSMRVHERGVGETRSC----XXXXXXXX 235 VS +DP LFP GVNVE+LT AV MRV+ERGVGETRSC Sbjct: 188 KLDLTVSPGYDPDLFPHGVNVEILTPLDEQRAVDMRVYERGVGETRSCGTGTVAAAAAAL 247 Query: 236 XXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHWWHAV 289 +G + VR+PGG +LRGPSVLVA G L WW + Sbjct: 248 SAEGFELATGSGAVTVRVPGGAVRVGLEAGSAWLRGPSVLVATGRLTADWWQTL 301 >tr|D5UMD7|D5UMD7_TSUPA Tax_Id=521096 SubName: Full=Diaminopimelate epimerase; EC=5.1.1.7;[Tsukamurella paurometabola DSM 20162] Length = 290 Score = 268 bits (684), Expect = 8e-70 Identities = 148/279 (53%), Positives = 165/279 (59%), Gaps = 5/279 (1%) Query: 3 FAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXFDR 62 F KGHGTENDFV+LPD + LTP VAALCDRR G+GAD D Sbjct: 6 FLKGHGTENDFVILPDPGVDIDLTPQLVAALCDRRAGIGADGVLRIARAGDLADAGVLDA 65 Query: 63 LPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPVVL 122 LP GV+ DW+MDYRN+DGSIA+MCGNGVRVFAH L AS L EFVVGS AG RPVV+ Sbjct: 66 LPAGVAREDWFMDYRNSDGSIAEMCGNGVRVFAHVLTASSLVPGPEFVVGSRAGGRPVVV 125 Query: 123 HGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXXXX 180 H DP A+V+V MG A FG+ SA V GR G+AVDVGNPHLACV G+T Sbjct: 126 HHADP---EAADVSVAMGPATVFGSSSAGVDGRDLAGIAVDVGNPHLACVVPGLTAADLG 182 Query: 181 XXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXXXX 240 P SFD LFP G NVEV+T VDGAV MRVHERG GETRSC Sbjct: 183 GLDVASPPSFDHGLFPHGTNVEVITPLVDGAVHMRVHERGSGETRSCGTGTVAAAVAALR 242 Query: 241 XXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARG 279 G + V +PGG LRGPS +VA G Sbjct: 243 SDDRQEGVVGVHVPGGTVTVTVAPDGAVLRGPSRIVATG 281 >tr|C0E2L5|C0E2L5_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 307 Score = 244 bits (622), Expect = 1e-62 Identities = 133/288 (46%), Positives = 165/288 (57%), Gaps = 13/288 (4%) Query: 3 FAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXFDR 62 F KGHGT+NDF++LPD +A LSLTP +A LCDR+RG+GAD Sbjct: 18 FTKGHGTQNDFIILPDPEAQLSLTPQLIATLCDRQRGIGADGILRVATTGALRRAGLLTN 77 Query: 63 LP---DGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRP 119 P + +S DW+MDY NADGS+A+MCGNG RVFAHY+R+ GL + D+F +G+ AG +P Sbjct: 78 NPTSLEAISDDDWFMDYYNADGSVAEMCGNGTRVFAHYVRSRGLVTTDQFTIGTRAGAKP 137 Query: 120 VVLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXX 177 V++H FD A V+V MG A G + +GGR + G+ VD+GNPHLACV G+T Sbjct: 138 VIVHSFDDDNAV---VSVAMGPATSLGESTCSMGGRMYAGMGVDMGNPHLACVVPGLTAE 194 Query: 178 XXXXXXXXXPVSFDPALFPDGVNVEVLTASVDG----AVSMRVHERGVGETRSCXXXXXX 233 P FD FP+GVNVEVLT V MRV+ERGVGETRSC Sbjct: 195 ALADLTLDRP-EFDTEFFPEGVNVEVLTELVHSPEGYRTHMRVYERGVGETRSCGTGTVA 253 Query: 234 XXXXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGEL 281 GT+ V+IPGG LRGPS LVA GEL Sbjct: 254 AARAALAYAGFVNGTVMVQIPGGQVEVTIDGDTSTLRGPSALVATGEL 301 >tr|C0WKR4|C0WKR4_9CORY Tax_Id=525260 (dapF)SubName: Full=Diaminopimelate epimerase; EC=5.1.1.7;[Corynebacterium accolens ATCC 49725] Length = 281 Score = 242 bits (618), Expect = 3e-62 Identities = 133/282 (47%), Positives = 160/282 (56%), Gaps = 6/282 (2%) Query: 1 MIFAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXF 60 M FAKGHGTENDFV++ D DA L+P VAALCDRR G+G D Sbjct: 1 MKFAKGHGTENDFVIVEDFDAEAPLSPERVAALCDRRAGIGGDGLLRVVRAGALVDAGEL 60 Query: 61 DRLPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPV 120 LPDGV + DW+MDYRNADGS+A+MCGNG RVFAH+LR+ L D F +G+ AG + V Sbjct: 61 AALPDGVDSADWFMDYRNADGSVAEMCGNGTRVFAHWLRSHDLVGEDAFTIGTRAGAKQV 120 Query: 121 VLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXX 178 +H D AT A VTVEMG A G +A VGG S+ GL VD+GNPHLA V G+ Sbjct: 121 TVHSCD---ATAASVTVEMGPARVTGVSTASVGGESYAGLGVDMGNPHLAAVIPGLEPEA 177 Query: 179 XXXXXXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXX 238 PV +D + FP GVN E++T +G V MRV ERGVGET+SC Sbjct: 178 LAAKDLTAPV-YDESFFPGGVNFELVTPLREGHVHMRVFERGVGETQSCGTGTVAAATAA 236 Query: 239 XXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGE 280 GT+ V +PGG L GPS +VA GE Sbjct: 237 LADAAQALGTVHVHVPGGEVTVEVYDGGTRLTGPSAIVATGE 278 >tr|C5VCL9|C5VCL9_9CORY Tax_Id=553207 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Corynebacterium matruchotii ATCC 14266] Length = 305 Score = 242 bits (617), Expect = 5e-62 Identities = 134/288 (46%), Positives = 166/288 (57%), Gaps = 13/288 (4%) Query: 3 FAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXFDR 62 F KGHGT+NDF++LPD +A LSLTP +A LCDR+RG+GAD Sbjct: 16 FTKGHGTQNDFIILPDPEAQLSLTPQLIATLCDRQRGIGADGILRVATTGALRRAGLLTN 75 Query: 63 LP---DGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRP 119 P + +S DW+MDY NADGS+A+MCGNG RVFAHY+R+ GL + D+F +G+ AG +P Sbjct: 76 NPTSLEAISDDDWFMDYYNADGSVAEMCGNGTRVFAHYVRSRGLVTTDQFTIGTRAGAKP 135 Query: 120 VVLHGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXX 177 V +H FD A V+V MG A G + +GGR + G+ VD+GNPHLACV G+T Sbjct: 136 VTVHSFDDDNAV---VSVAMGPATSLGESTCSMGGRMYAGMGVDMGNPHLACVVPGLTAE 192 Query: 178 XXXXXXXXXPVSFDPALFPDGVNVEVLTA---SVDG-AVSMRVHERGVGETRSCXXXXXX 233 P FD FP+GVNVEVLT S +G MRV+ERGVGETRSC Sbjct: 193 ALADLTLDRP-EFDAEFFPEGVNVEVLTELAHSPEGYRTHMRVYERGVGETRSCGTGTVA 251 Query: 234 XXXXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGEL 281 GT+ V+IPGG LRGPS LVA GEL Sbjct: 252 AARAALAYAGFVNGTVMVQIPGGQVEVTIDGDTSTLRGPSALVATGEL 299 >tr|Q6NGR6|Q6NGR6_CORDI Tax_Id=1717 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Corynebacterium diphtheriae] Length = 297 Score = 241 bits (615), Expect = 8e-62 Identities = 133/280 (47%), Positives = 161/280 (57%), Gaps = 6/280 (2%) Query: 5 KGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXFDRLP 64 KGHGTENDFV++PDLDA + LTP +AALCDRR G+G D LP Sbjct: 15 KGHGTENDFVIIPDLDAKIELTPDFIAALCDRRSGIGGDGLLRVATAQALLKSGVLAALP 74 Query: 65 DGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPVVLHG 124 DGV+A D +MDY NADGS AQMCGNG RVFAH++RA G++ DEFVVG+ AG R V + Sbjct: 75 DGVAATDVFMDYYNADGSTAQMCGNGTRVFAHWVRAHGIKDEDEFVVGTRAGARFVKVRS 134 Query: 125 FDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXXXXXX 182 FD ++ AEVTV+MG A G + +G + F GL VD+GNPHLACV G Sbjct: 135 FDDSQ---AEVTVDMGSAEVTGVSTCTIGSQQFAGLGVDMGNPHLACVVPGYGQEDIENL 191 Query: 183 XXXXPVSFDPALFPDGVNVEVLTASVDGAVSMRVHERGVGETRSCXXXXXXXXXXXXXXX 242 P+ FDP FP+GVNVE+ T V G MRV ERGVGETRSC Sbjct: 192 DLVKPL-FDPKFFPEGVNVEIATPLVQGVTHMRVFERGVGETRSCGTGTVATARAALADA 250 Query: 243 XXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELD 282 G + V +PGG L GPS +VA G ++ Sbjct: 251 GHADGEVVVVVPGGKVRVTIQGDESTLTGPSRIVASGYIN 290 >tr|D0LBP8|D0LBP8_GORB4 Tax_Id=526226 (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7;[Gordonia bronchialis] Length = 302 Score = 239 bits (609), Expect = 4e-61 Identities = 139/290 (47%), Positives = 164/290 (56%), Gaps = 10/290 (3%) Query: 3 FAKGHGTENDFVVLPDLDAALSLTPSAVAALCDRRRGLGADXXXXXXXXXXXXXXXXFDR 62 F KGHGT+NDFV+L D A L + S VAALCDR RG+GAD + Sbjct: 9 FVKGHGTQNDFVILADPAADLDIDASLVAALCDRPRGIGADGLLRVARAGALVAAGVLEM 68 Query: 63 LPDGVSAGDWYMDYRNADGSIAQMCGNGVRVFAHYLRASGLESADEFVVGSLAGPRPVVL 122 LPDGV+ DW+MDYRNADGSIA+MCGNGVRVFAH+LRA GL DEF VGS AG RPV + Sbjct: 69 LPDGVAPDDWFMDYRNADGSIAEMCGNGVRVFAHFLRARGLVDVDEFTVGSRAGGRPVTV 128 Query: 123 HGFDPARATTAEVTVEMGKANQFGAGSAVVGGRSFDGLAVDVGNPHLACV--GITXXXXX 180 H D A +A+VTVEMG+A + +G + G VDVGNPHLACV + Sbjct: 129 HSHD---ALSADVTVEMGQATVDFDAAVRIGDDLYVGTKVDVGNPHLACVVGDLDVDELA 185 Query: 181 XXXXXXPVSFDPALFPDGVNVEVLT---ASVDGAVS--MRVHERGVGETRSCXXXXXXXX 235 V + A FP G NVE+LT + DG ++ MRV ERGVGETRSC Sbjct: 186 AVDFTAGVRLEAADFPHGANVELLTRPAVADDGVLTAHMRVFERGVGETRSCGTGLVAAA 245 Query: 236 XXXXXXXXXXTGTLRVRIPGGXXXXXXXXXXXYLRGPSVLVARGELDPHW 285 G LR+ +PGG LRGPS+LVA GEL W Sbjct: 246 AAAFAGRGEPGGDLRIHVPGGTVLVTIAATGTRLRGPSMLVAEGELRDGW 295 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.321 0.139 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,981,808,574 Number of extensions: 69846199 Number of successful extensions: 138415 Number of sequences better than 10.0: 1754 Number of HSP's gapped: 135708 Number of HSP's successfully gapped: 1829 Length of query: 291 Length of database: 4,236,830,644 Length adjustment: 137 Effective length of query: 154 Effective length of database: 2,523,253,276 Effective search space: 388581004504 Effective search space used: 388581004504 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 80 (35.4 bits)