BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_3026
         (170 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|A0QWQ5|RUVX_MYCS2 Tax_Id=246196 RecName: Full=Putative Hollid...   216   6e-55
sp|Q1B9H9|RUVX_MYCSS Tax_Id=164756 RecName: Full=Putative Hollid...   169   1e-40
sp|A1UFI4|RUVX_MYCSK Tax_Id=189918 RecName: Full=Putative Hollid...   169   1e-40
sp|A3PZ45|RUVX_MYCSJ Tax_Id=164757 RecName: Full=Putative Hollid...   169   1e-40
sp|P67487|RUVX_MYCTU Tax_Id=1773 RecName: Full=Putative Holliday...   164   3e-39
sp|A5U5Q4|RUVX_MYCTA Tax_Id=419947 RecName: Full=Putative Hollid...   164   3e-39
sp|C1AF23|RUVX_MYCBT Tax_Id=561275 RecName: Full=Putative Hollid...   164   3e-39
sp|A1KLQ2|RUVX_MYCBP Tax_Id=410289 RecName: Full=Putative Hollid...   164   3e-39
sp|P67488|RUVX_MYCBO Tax_Id=1765 RecName: Full=Putative Holliday...   164   3e-39
tr|C6DME1|C6DME1_MYCTK Tax_Id=478434 RecName: Full=Putative Holl...   164   3e-39
tr|A5WQG3|A5WQG3_MYCTF Tax_Id=336982 RecName: Full=Putative Holl...   164   3e-39
tr|A4TBW3|A4TBW3_MYCGI Tax_Id=350054 RecName: Full=Putative Holl...   164   3e-39
tr|D6G4A8|D6G4A8_MYCTU Tax_Id=478435 SubName: Full=Putative unch...   164   3e-39
tr|D6FYU6|D6FYU6_MYCTU Tax_Id=611304 SubName: Full=Holliday junc...   164   3e-39
tr|D6FJC1|D6FJC1_MYCTU Tax_Id=611303 SubName: Full=Putative unch...   164   3e-39
tr|D6F714|D6F714_MYCTU Tax_Id=611302 SubName: Full=Putative unch...   164   3e-39
tr|D5ZJ75|D5ZJ75_MYCTU Tax_Id=537210 SubName: Full=Putative unch...   164   3e-39
tr|D5Z681|D5Z681_MYCTU Tax_Id=537209 SubName: Full=Putative unch...   164   3e-39
tr|D5YUW5|D5YUW5_MYCTU Tax_Id=515616 SubName: Full=Putative unch...   164   3e-39
tr|D5YKE9|D5YKE9_MYCTU Tax_Id=520140 SubName: Full=Putative unch...   164   3e-39
tr|D5XWJ9|D5XWJ9_MYCTU Tax_Id=515617 SubName: Full=Putative unch...   164   3e-39
tr|A4KNY0|A4KNY0_MYCTU Tax_Id=395095 RecName: Full=Putative Holl...   164   3e-39
tr|A2VKR4|A2VKR4_MYCTU Tax_Id=348776 RecName: Full=Putative Holl...   164   3e-39
tr|A1T8E9|A1T8E9_MYCVP Tax_Id=350058 RecName: Full=Putative Holl...   163   6e-39
sp|A0PPG7|RUVX_MYCUA Tax_Id=362242 RecName: Full=Putative Hollid...   162   1e-38
sp|B2HNC2|RUVX_MYCMM Tax_Id=216594 RecName: Full=Putative Hollid...   162   1e-38
sp|Q741L2|RUVX_MYCPA Tax_Id=1770 RecName: Full=Putative Holliday...   161   2e-38
tr|A0QI74|A0QI74_MYCA1 Tax_Id=243243 RecName: Full=Putative Holl...   161   2e-38
tr|D5PI01|D5PI01_9MYCO Tax_Id=525368 SubName: Full=YqgF family c...   158   2e-37
sp|Q9CCS9|RUVX_MYCLE Tax_Id=1769 RecName: Full=Putative Holliday...   145   2e-33
sp|B8ZUJ7|RUVX_MYCLB Tax_Id=561304 RecName: Full=Putative Hollid...   145   2e-33
sp|Q0S0N6|RUVX_RHOSR Tax_Id=101510 RecName: Full=Putative Hollid...   142   1e-32
sp|C1B4H5|RUVX_RHOOB Tax_Id=632772 RecName: Full=Putative Hollid...   142   2e-32
sp|C0ZZA9|RUVX_RHOE4 Tax_Id=234621 RecName: Full=Putative Hollid...   140   7e-32
tr|C3JSR8|C3JSR8_RHOER Tax_Id=596309 RecName: Full=Putative Holl...   140   7e-32
sp|Q5YTK0|RUVX_NOCFA Tax_Id=37329 RecName: Full=Putative Hollida...   138   3e-31
sp|B1MCF8|RUVX_MYCA9 Tax_Id=561007 RecName: Full=Putative Hollid...   133   6e-30
tr|D5PM44|D5PM44_COREQ Tax_Id=525370 SubName: Full=Holliday junc...   133   8e-30
tr|D6B971|D6B971_9ACTO Tax_Id=457425 SubName: Full=Putative unch...   118   2e-25
tr|D5UNM0|D5UNM0_TSUPA Tax_Id=521096 SubName: Full=Holliday junc...   118   3e-25
tr|D0LCP5|D0LCP5_GORB4 Tax_Id=526226 RecName: Full=Putative Holl...   117   5e-25
tr|C7MSG5|C7MSG5_SACVD Tax_Id=471857 RecName: Full=Putative Holl...   117   5e-25
tr|C6W913|C6W913_ACTMD Tax_Id=446462 RecName: Full=Putative Holl...   115   2e-24
tr|A8LXY9|A8LXY9_SALAI Tax_Id=391037 RecName: Full=Putative Holl...   114   4e-24
tr|C8NUE0|C8NUE0_9CORY Tax_Id=585529 RecName: Full=Putative Holl...   114   4e-24

>sp|A0QWQ5|RUVX_MYCS2 Tax_Id=246196 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium smegmatis]
          Length = 170

 Score =  216 bits (551), Expect = 6e-55
 Identities = 116/137 (84%), Positives = 116/137 (84%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDR      
Sbjct: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRASASAH 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 EQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW
Sbjct: 94  DAVDVAEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153

Query: 154 LDQXXXXXXXXXEGTDG 170
           LDQ         EGTDG
Sbjct: 154 LDQRRAALAARREGTDG 170


>sp|Q1B9H9|RUVX_MYCSS Tax_Id=164756 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium sp.]
          Length = 169

 Score =  169 bits (427), Expect = 1e-40
 Identities = 92/137 (67%), Positives = 102/137 (74%), Gaps = 2/137 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A+SDPDG+LATPVETV R+K   + +HVRRLA LV E EAVEV+VGLPRTL DR      
Sbjct: 35  ATSDPDGVLATPVETVRREK--SSDRHVRRLAQLVTELEAVEVVVGLPRTLADRTGPAAH 92

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARRIAP PVR+ADERLTTVSAQRSLREAGVRA+GQ+A+IDQVAAVGILQ W
Sbjct: 93  DAIDVAEALARRIAPVPVRMADERLTTVSAQRSLREAGVRAKGQRAMIDQVAAVGILQSW 152

Query: 154 LDQXXXXXXXXXEGTDG 170
           LDQ         EG  G
Sbjct: 153 LDQRRAALAAPGEGGHG 169


>sp|A1UFI4|RUVX_MYCSK Tax_Id=189918 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium sp.]
          Length = 169

 Score =  169 bits (427), Expect = 1e-40
 Identities = 92/137 (67%), Positives = 102/137 (74%), Gaps = 2/137 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A+SDPDG+LATPVETV R+K   + +HVRRLA LV E EAVEV+VGLPRTL DR      
Sbjct: 35  ATSDPDGVLATPVETVRREK--SSDRHVRRLAQLVTELEAVEVVVGLPRTLADRTGPAAH 92

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARRIAP PVR+ADERLTTVSAQRSLREAGVRA+GQ+A+IDQVAAVGILQ W
Sbjct: 93  DAIDVAEALARRIAPVPVRMADERLTTVSAQRSLREAGVRAKGQRAMIDQVAAVGILQSW 152

Query: 154 LDQXXXXXXXXXEGTDG 170
           LDQ         EG  G
Sbjct: 153 LDQRRAALAAPGEGGHG 169


>sp|A3PZ45|RUVX_MYCSJ Tax_Id=164757 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium sp.]
          Length = 169

 Score =  169 bits (427), Expect = 1e-40
 Identities = 92/137 (67%), Positives = 102/137 (74%), Gaps = 2/137 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A+SDPDG+LATPVETV R+K   + +HVRRLA LV E EAVEV+VGLPRTL DR      
Sbjct: 35  ATSDPDGVLATPVETVRREK--SSDRHVRRLAQLVTELEAVEVVVGLPRTLADRTGPAAH 92

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARRIAP PVR+ADERLTTVSAQRSLREAGVRA+GQ+A+IDQVAAVGILQ W
Sbjct: 93  DAIDVAEALARRIAPVPVRMADERLTTVSAQRSLREAGVRAKGQRAMIDQVAAVGILQSW 152

Query: 154 LDQXXXXXXXXXEGTDG 170
           LDQ         EG  G
Sbjct: 153 LDQRRAALAAPGEGGHG 169


>sp|P67487|RUVX_MYCTU Tax_Id=1773 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>sp|A5U5Q4|RUVX_MYCTA Tax_Id=419947 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>sp|C1AF23|RUVX_MYCBT Tax_Id=561275 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>sp|A1KLQ2|RUVX_MYCBP Tax_Id=410289 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>sp|P67488|RUVX_MYCBO Tax_Id=1765 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|C6DME1|C6DME1_MYCTK Tax_Id=478434 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|A5WQG3|A5WQG3_MYCTF Tax_Id=336982 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|A4TBW3|A4TBW3_MYCGI Tax_Id=350054 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Mycobacterium
           gilvum]
          Length = 175

 Score =  164 bits (415), Expect = 3e-39
 Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 2/123 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD +LATPVETV RD+R  +G+H+RRL  LV EYEAVEV++GLPRTLG+R      
Sbjct: 41  AVSDPDAVLATPVETVTRDRR--SGRHLRRLTTLVGEYEAVEVVIGLPRTLGNRAGSSAQ 98

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 +QLA RIAP PVRLADER TTV+AQR LREAGVRARGQK++IDQ AAVGILQ W
Sbjct: 99  DATEVADQLAARIAPVPVRLADERFTTVTAQRELREAGVRARGQKSMIDQAAAVGILQNW 158

Query: 154 LDQ 156
           LDQ
Sbjct: 159 LDQ 161


>tr|D6G4A8|D6G4A8_MYCTU Tax_Id=478435 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis KZN
           605]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D6FYU6|D6FYU6_MYCTU Tax_Id=611304 SubName: Full=Holliday
           junction resolvase; SubName: Full=Predicted
           protein;[Mycobacterium tuberculosis K85]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D6FJC1|D6FJC1_MYCTU Tax_Id=611303 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis
           CPHL_A]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D6F714|D6F714_MYCTU Tax_Id=611302 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T46]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D5ZJ75|D5ZJ75_MYCTU Tax_Id=537210 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T17]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D5Z681|D5Z681_MYCTU Tax_Id=537209 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis GM
           1503]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D5YUW5|D5YUW5_MYCTU Tax_Id=515616 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis
           02_1987]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D5YKE9|D5YKE9_MYCTU Tax_Id=520140 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis
           EAS054]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|D5XWJ9|D5XWJ9_MYCTU Tax_Id=515617 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis T92]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|A4KNY0|A4KNY0_MYCTU Tax_Id=395095 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|A2VKR4|A2VKR4_MYCTU Tax_Id=348776 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis C]
          Length = 170

 Score =  164 bits (415), Expect = 3e-39
 Identities = 90/136 (66%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV   +RD++GKH+RRLAAL  E EAVEVIVGLPRTL DR      
Sbjct: 37  ACSDPDAILATPVETV---RRDRSGKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQ 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR++PTPVRLADERLTTVSAQRSLR+AGVRA  Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSW 153

Query: 154 LDQXXXXXXXXXEGTD 169
           LD+         EG+D
Sbjct: 154 LDERLAAMAGTQEGSD 169


>tr|A1T8E9|A1T8E9_MYCVP Tax_Id=350058 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Mycobacterium
           vanbaalenii]
          Length = 175

 Score =  163 bits (413), Expect = 6e-39
 Identities = 89/123 (72%), Positives = 95/123 (77%), Gaps = 2/123 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD ILATPVETV RDKR    KHVRRLAALV EY+ VEV+VGLPRTL DR      
Sbjct: 41  AVSDPDAILATPVETVPRDKRGT--KHVRRLAALVDEYQVVEVVVGLPRTLADRAGSSAQ 98

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LA RIAP PVRLADER TTV+AQR+LREAGVRARGQ++VIDQ AAVGILQ W
Sbjct: 99  DATEVAEVLAGRIAPVPVRLADERFTTVTAQRALREAGVRARGQRSVIDQAAAVGILQNW 158

Query: 154 LDQ 156
           LDQ
Sbjct: 159 LDQ 161


>sp|A0PPG7|RUVX_MYCUA Tax_Id=362242 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium ulcerans]
          Length = 170

 Score =  162 bits (410), Expect = 1e-38
 Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           ASSDPDGILATP+ETV   +R+++GKH+RRLA LV E EAVEVIVGLPRTL DR      
Sbjct: 40  ASSDPDGILATPLETV---RRERSGKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQ 96

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 ++LA R+AP PVRLADERLTTVSAQRSLREAGVRA+ Q+AVIDQ AAV ILQ W
Sbjct: 97  DAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAW 156

Query: 154 LDQ 156
           LDQ
Sbjct: 157 LDQ 159


>sp|B2HNC2|RUVX_MYCMM Tax_Id=216594 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium marinum]
          Length = 170

 Score =  162 bits (410), Expect = 1e-38
 Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           ASSDPDGILATP+ETV   +R+++GKH+RRLA LV E EAVEVIVGLPRTL DR      
Sbjct: 40  ASSDPDGILATPLETV---RRERSGKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQ 96

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 ++LA R+AP PVRLADERLTTVSAQRSLREAGVRA+ Q+AVIDQ AAV ILQ W
Sbjct: 97  DAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAW 156

Query: 154 LDQ 156
           LDQ
Sbjct: 157 LDQ 159


>sp|Q741L2|RUVX_MYCPA Tax_Id=1770 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium
           paratuberculosis]
          Length = 167

 Score =  161 bits (408), Expect = 2e-38
 Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD +LATPVETV   +RD++GKH+RRLAALV E  AVEV+VGLPRTL DR      
Sbjct: 37  ACSDPDAVLATPVETV---RRDRSGKHLRRLAALVTELGAVEVVVGLPRTLADRTGTSAL 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 +QLARRIAPTPVRLADERLTTV+AQRSLR AGVRA+ Q+AVIDQ AAV ILQ W
Sbjct: 94  DAIDLADQLARRIAPTPVRLADERLTTVAAQRSLRAAGVRAKEQRAVIDQAAAVAILQSW 153

Query: 154 LDQ 156
           LDQ
Sbjct: 154 LDQ 156


>tr|A0QI74|A0QI74_MYCA1 Tax_Id=243243 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Mycobacterium
           avium]
          Length = 165

 Score =  161 bits (408), Expect = 2e-38
 Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPD +LATPVETV   +RD++GKH+RRLAALV E  AVEV+VGLPRTL DR      
Sbjct: 35  ACSDPDAVLATPVETV---RRDRSGKHLRRLAALVTELGAVEVVVGLPRTLADRTGASAL 91

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 +QLARRIAPTPVRLADERLTTV+AQRSLR AGVRA+ Q+AVIDQ AAV ILQ W
Sbjct: 92  DAIDLADQLARRIAPTPVRLADERLTTVAAQRSLRAAGVRAKEQRAVIDQAAAVAILQSW 151

Query: 154 LDQ 156
           LDQ
Sbjct: 152 LDQ 154


>tr|D5PI01|D5PI01_9MYCO Tax_Id=525368 SubName: Full=YqgF family
           crossover junction endodeoxyribonuclease,
           YrrK;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 169

 Score =  158 bits (400), Expect = 2e-37
 Identities = 86/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPDGILATPVETV   +RD++GKHVRRLA L  E  AVEV+VGLPRTL DR      
Sbjct: 37  ACSDPDGILATPVETV---RRDRSGKHVRRLAELAAELGAVEVVVGLPRTLADRTGPSAL 93

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 + LA+R+APTPVRLADERLTTVSAQRSLR AGVRA+ Q+AVIDQ AAV ILQ W
Sbjct: 94  DAMELADTLAQRLAPTPVRLADERLTTVSAQRSLRAAGVRAKEQRAVIDQAAAVAILQSW 153

Query: 154 LDQ 156
           LDQ
Sbjct: 154 LDQ 156


>sp|Q9CCS9|RUVX_MYCLE Tax_Id=1769 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium leprae]
          Length = 184

 Score =  145 bits (365), Expect = 2e-33
 Identities = 81/123 (65%), Positives = 90/123 (73%), Gaps = 3/123 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPDGILATPVETV   +R ++ KH+RRLA LV E + VEV+VGLP TL DR      
Sbjct: 41  AFSDPDGILATPVETV---RRYRSAKHLRRLAELVVELQVVEVVVGLPWTLTDRTGSSAK 97

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR+AP PVRL DERLTTVSAQR LR AGVRA+ Q+AVIDQ AAV ILQ W
Sbjct: 98  DAIDTAEALARRVAPVPVRLVDERLTTVSAQRLLRAAGVRAKDQRAVIDQAAAVVILQNW 157

Query: 154 LDQ 156
           LDQ
Sbjct: 158 LDQ 160


>sp|B8ZUJ7|RUVX_MYCLB Tax_Id=561304 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium leprae]
          Length = 184

 Score =  145 bits (365), Expect = 2e-33
 Identities = 81/123 (65%), Positives = 90/123 (73%), Gaps = 3/123 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDPDGILATPVETV   +R ++ KH+RRLA LV E + VEV+VGLP TL DR      
Sbjct: 41  AFSDPDGILATPVETV---RRYRSAKHLRRLAELVVELQVVEVVVGLPWTLTDRTGSSAK 97

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 E LARR+AP PVRL DERLTTVSAQR LR AGVRA+ Q+AVIDQ AAV ILQ W
Sbjct: 98  DAIDTAEALARRVAPVPVRLVDERLTTVSAQRLLRAAGVRAKDQRAVIDQAAAVVILQNW 157

Query: 154 LDQ 156
           LDQ
Sbjct: 158 LDQ 160


>sp|Q0S0N6|RUVX_RHOSR Tax_Id=101510 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Rhodococcus sp.]
          Length = 178

 Score =  142 bits (358), Expect = 1e-32
 Identities = 78/137 (56%), Positives = 93/137 (67%), Gaps = 1/137 (0%)

Query: 34  ASSDPDGILATPVETVARDK-RDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXX 92
           ASSDPDGILATPVETV R K R      +RR+A +V+EYEAVEVIVGLP+TL        
Sbjct: 34  ASSDPDGILATPVETVPRSKERGPDAPDIRRIADIVEEYEAVEVIVGLPQTLRGERGKAA 93

Query: 93  XXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQG 152
                  ++L R++ P PVR+ADERLTTV+A R+LRE+GV ARGQ+ VIDQ AAV ILQG
Sbjct: 94  SIATVFAKRLRRKVDPIPVRMADERLTTVTAARALRESGVSARGQRPVIDQAAAVAILQG 153

Query: 153 WLDQXXXXXXXXXEGTD 169
           WLD+          G D
Sbjct: 154 WLDERSRSVNAGDSGGD 170


>sp|C1B4H5|RUVX_RHOOB Tax_Id=632772 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Rhodococcus opacus]
          Length = 178

 Score =  142 bits (357), Expect = 2e-32
 Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 34  ASSDPDGILATPVETVARDK-RDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXX 92
           ASSDPDGILATPVETV R K R      +RR+A +V+EYEAVEVIVGLP+TL        
Sbjct: 34  ASSDPDGILATPVETVPRSKDRGPDAPDIRRIADIVEEYEAVEVIVGLPQTLRGERGKAA 93

Query: 93  XXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQG 152
                  ++L R++ P PVR+ADERLTTV+A R+LRE+GV ARGQ+ VIDQ AAV ILQG
Sbjct: 94  SIATVFAKRLRRKVDPIPVRMADERLTTVTAARALRESGVSARGQRPVIDQAAAVAILQG 153

Query: 153 WLDQ 156
           WLD+
Sbjct: 154 WLDE 157


>sp|C0ZZA9|RUVX_RHOE4 Tax_Id=234621 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Rhodococcus
           erythropolis]
          Length = 177

 Score =  140 bits (352), Expect = 7e-32
 Identities = 75/124 (60%), Positives = 90/124 (72%), Gaps = 1/124 (0%)

Query: 34  ASSDPDGILATPVETVARDK-RDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXX 92
           ASSDPDGILATPVETV R K R      +RR+ A+V EYEAVEVIVGLP+TL        
Sbjct: 34  ASSDPDGILATPVETVPRSKERGPDAPDIRRIIAIVSEYEAVEVIVGLPQTLRGEQGKAA 93

Query: 93  XXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQG 152
                  ++L R + P PVRL+DERLTTV+A R+LRE+GV+ARGQ+ +IDQ AAV ILQG
Sbjct: 94  GIATAFAKRLQRAVEPIPVRLSDERLTTVTAARNLRESGVKARGQRPMIDQAAAVEILQG 153

Query: 153 WLDQ 156
           WLD+
Sbjct: 154 WLDE 157


>tr|C3JSR8|C3JSR8_RHOER Tax_Id=596309 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Rhodococcus
           erythropolis SK121]
          Length = 177

 Score =  140 bits (352), Expect = 7e-32
 Identities = 75/124 (60%), Positives = 90/124 (72%), Gaps = 1/124 (0%)

Query: 34  ASSDPDGILATPVETVARDK-RDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXX 92
           ASSDPDGILATPVETV R K R      +RR+ A+V EYEAVEVIVGLP+TL        
Sbjct: 34  ASSDPDGILATPVETVPRSKERGPDAPDIRRIIAIVSEYEAVEVIVGLPQTLRGEQGKAA 93

Query: 93  XXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQG 152
                  ++L R + P PVRL+DERLTTV+A R+LRE+GV+ARGQ+ +IDQ AAV ILQG
Sbjct: 94  GIATAFAKRLQRAVEPIPVRLSDERLTTVTAARNLRESGVKARGQRPMIDQAAAVEILQG 153

Query: 153 WLDQ 156
           WLD+
Sbjct: 154 WLDE 157


>sp|Q5YTK0|RUVX_NOCFA Tax_Id=37329 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Nocardia farcinica]
          Length = 180

 Score =  138 bits (347), Expect = 3e-31
 Identities = 76/126 (60%), Positives = 89/126 (70%), Gaps = 3/126 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGK---HVRRLAALVKEYEAVEVIVGLPRTLGDRXXX 90
           ASSDPDGILATPVETV R K+   G     + R+A +V+EYEAVEVIVGLPRTL      
Sbjct: 34  ASSDPDGILATPVETVPRAKKVPRGTVSPDIARIAEIVREYEAVEVIVGLPRTLRGEKGS 93

Query: 91  XXXXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGIL 150
                    E+L R I    +RL+DERLTTVSA R+LR++GVRARGQ+ VIDQ AAV IL
Sbjct: 94  AATAAIAFAERLRREIPDVAIRLSDERLTTVSAARALRDSGVRARGQRQVIDQAAAVSIL 153

Query: 151 QGWLDQ 156
           QGWLD+
Sbjct: 154 QGWLDE 159


>sp|B1MCF8|RUVX_MYCA9 Tax_Id=561007 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium abscessus]
          Length = 166

 Score =  133 bits (335), Expect = 6e-30
 Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 2/123 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           +SSDPDGILATPVETV+RD ++ +    RR+A LV+E   VEV+VGLPR L +       
Sbjct: 35  SSSDPDGILATPVETVSRDAKEDSD--FRRIAELVEEMSVVEVVVGLPRNLREGTGSSAR 92

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                  +L  RIAP PVRL DER TT +AQRSLREAGVR+R Q+ +IDQ AAV ILQ W
Sbjct: 93  DAAGFARELGERIAPVPVRLVDERFTTTTAQRSLREAGVRSRQQRGIIDQAAAVAILQDW 152

Query: 154 LDQ 156
           L+Q
Sbjct: 153 LEQ 155


>tr|D5PM44|D5PM44_COREQ Tax_Id=525370 SubName: Full=Holliday
           junction resolvase family protein;
           EC=3.1.-.-;[Rhodococcus equi ATCC 33707]
          Length = 150

 Score =  133 bits (334), Expect = 8e-30
 Identities = 70/124 (56%), Positives = 88/124 (70%), Gaps = 1/124 (0%)

Query: 34  ASSDPDGILATPVETVARDK-RDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXX 92
           AS DP+ ILATPVETV R K +      +RR+ A+V+EYEAVEVIVGLP+TL        
Sbjct: 6   ASCDPECILATPVETVPRSKEKGPDAPDIRRIVAIVEEYEAVEVIVGLPQTLRGERGKAA 65

Query: 93  XXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQG 152
                   +L R + P PVR+ADERLTTV+A R+LRE+GV+A+GQ+ +IDQ AAV ILQG
Sbjct: 66  DLASAFARRLRRAVEPVPVRMADERLTTVTASRALRESGVKAKGQRPMIDQAAAVAILQG 125

Query: 153 WLDQ 156
           WLD+
Sbjct: 126 WLDE 129


>tr|D6B971|D6B971_9ACTO Tax_Id=457425 SubName: Full=Putative
           uncharacterized protein;[Streptomyces albus J1074]
          Length = 158

 Score =  118 bits (296), Expect = 2e-25
 Identities = 70/136 (51%), Positives = 87/136 (63%), Gaps = 3/136 (2%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           AS DPDGILATPVETV    RD    H RRLAALV+EYE +EV+VGLPR+L         
Sbjct: 23  ASCDPDGILATPVETVPG--RDVPAAH-RRLAALVEEYEPIEVVVGLPRSLKGGEGPAAV 79

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 ++LAR IAP PVRL DER++TV+A + +R +GVR++  +AVIDQ AAV ILQ  
Sbjct: 80  KVRGFAQELARTIAPVPVRLVDERMSTVTAAQGMRASGVRSKKGRAVIDQAAAVVILQSA 139

Query: 154 LDQXXXXXXXXXEGTD 169
           L+          EG +
Sbjct: 140 LESERASGDAPGEGVE 155


>tr|D5UNM0|D5UNM0_TSUPA Tax_Id=521096 SubName: Full=Holliday
           junction resolvase YqgF;[Tsukamurella paurometabola DSM
           20162]
          Length = 161

 Score =  118 bits (295), Expect = 3e-25
 Identities = 73/133 (54%), Positives = 89/133 (66%), Gaps = 18/133 (13%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTL-GDRXXXXX 92
           A SDPDGILATPVETV   K  + G  +RR+A LV +YE VE+++GLPRTL GDR     
Sbjct: 25  AVSDPDGILATPVETV---KAARDGSDLRRIAQLVTDYEPVEIVIGLPRTLRGDRGESAR 81

Query: 93  XXXXXXXEQLARRIA--------PTP-VRLADERLTTVSAQRSLREAGVRARGQKAVIDQ 143
                  E  A R+A        P+P V  +DER TTV+AQR+LR+ GVRA+ Q+AVIDQ
Sbjct: 82  MA-----EGFAARLATVLDATDQPSPRVCFSDERFTTVTAQRALRDNGVRAKEQRAVIDQ 136

Query: 144 VAAVGILQGWLDQ 156
            AAV ILQGWLD+
Sbjct: 137 AAAVAILQGWLDE 149


>tr|D0LCP5|D0LCP5_GORB4 Tax_Id=526226 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Gordonia
           bronchialis]
          Length = 143

 Score =  117 bits (293), Expect = 5e-25
 Identities = 65/122 (53%), Positives = 80/122 (65%), Gaps = 2/122 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A  DPDGILATPVETVAR   +     + R+A LV EY+A EVIVGLP+TL +       
Sbjct: 21  AVCDPDGILATPVETVARTPHNDDD--IERIATLVDEYDAAEVIVGLPKTLRNEAGAAAE 78

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                 ++LA RIAP  V   DERLTTV+A +++R +G  A+  +AVIDQ AAV ILQGW
Sbjct: 79  AARDFGDRLAARIAPVGVSYHDERLTTVTAHQAMRASGRNAKSSRAVIDQAAAVAILQGW 138

Query: 154 LD 155
           LD
Sbjct: 139 LD 140


>tr|C7MSG5|C7MSG5_SACVD Tax_Id=471857 RecName: Full=Putative
           Holliday junction resolvase;
           EC=3.1.-.-;[Saccharomonospora viridis]
          Length = 154

 Score =  117 bits (293), Expect = 5e-25
 Identities = 66/122 (54%), Positives = 80/122 (65%), Gaps = 2/122 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDP  ILA+P+ T++RD    T K +  LA LV E++ VEVIVGLPRTL DR      
Sbjct: 22  ALSDPTPILASPLVTLSRDA--DTDKDLEELARLVAEHDVVEVIVGLPRTLADRHGTAAA 79

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                  +LA RI+P  VRLADERL+TVSA R L + GV+ R Q+AV+DQ AAV  LQ W
Sbjct: 80  IAADYARRLAERISPVAVRLADERLSTVSASRMLSQRGVKGRKQRAVVDQAAAVEFLQAW 139

Query: 154 LD 155
           LD
Sbjct: 140 LD 141


>tr|C6W913|C6W913_ACTMD Tax_Id=446462 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Actinosynnema
           mirum]
          Length = 170

 Score =  115 bits (287), Expect = 2e-24
 Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 34  ASSDPDGILATPVETVARDKRDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXXXX 93
           A SDP   LATP+ T++RD  +K G+ +  L  L  E++ VEV+VGLPRTL  +      
Sbjct: 30  ALSDPGAFLATPLVTLSRD--EKNGRDLDDLVGLAAEHDVVEVVVGLPRTLAGKHGPAAQ 87

Query: 94  XXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQGW 153
                   LA R+AP PVRL DERLTTV+A R L + GVR + Q+AV+DQ AAV ILQ W
Sbjct: 88  AATAYAAALAERVAPLPVRLTDERLTTVTASRVLAQRGVRGKKQRAVVDQAAAVEILQSW 147

Query: 154 LD 155
           LD
Sbjct: 148 LD 149


>tr|A8LXY9|A8LXY9_SALAI Tax_Id=391037 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Salinispora
           arenicola]
          Length = 153

 Score =  114 bits (285), Expect = 4e-24
 Identities = 65/125 (52%), Positives = 78/125 (62%), Gaps = 3/125 (2%)

Query: 34  ASSDPDGILATPVETVARDKR---DKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXX 90
           A SDP G+LATP+ T+ARD+    D     +  LAALV E+EAVEV+VGLP  L  R   
Sbjct: 22  ARSDPHGVLATPLVTLARDRDAAPDAVPSDIAELAALVAEHEAVEVVVGLPVNLAGRHGP 81

Query: 91  XXXXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGIL 150
                     +L   I+P PV LADER++TV A R L E GVR R Q+AV+DQ AAV IL
Sbjct: 82  AAVQVQEYVGRLVEVISPVPVTLADERMSTVVASRRLAERGVRGRRQRAVVDQAAAVEIL 141

Query: 151 QGWLD 155
           Q WLD
Sbjct: 142 QSWLD 146


>tr|C8NUE0|C8NUE0_9CORY Tax_Id=585529 RecName: Full=Putative
           Holliday junction resolvase; EC=3.1.-.-;[Corynebacterium
           genitalium ATCC 33030]
          Length = 167

 Score =  114 bits (285), Expect = 4e-24
 Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 2/124 (1%)

Query: 34  ASSDPDGILATPVETVARDK--RDKTGKHVRRLAALVKEYEAVEVIVGLPRTLGDRXXXX 91
           ASSD DG+LATPVETV R    +D+ G  + RL  ++ EY+AVEV+VGLPR L       
Sbjct: 31  ASSDRDGLLATPVETVERVTGFKDRDGADIDRLLDIISEYDAVEVVVGLPRDLKGNGSSS 90

Query: 92  XXXXXXXXEQLARRIAPTPVRLADERLTTVSAQRSLREAGVRARGQKAVIDQVAAVGILQ 151
                    ++ RR    PVR ADERLTTV A  +LR +GV AR  +AVIDQ AAV ILQ
Sbjct: 91  VKHAKEIAFRIGRRNPDVPVRFADERLTTVEATNALRLSGVNARDGRAVIDQAAAVAILQ 150

Query: 152 GWLD 155
            WLD
Sbjct: 151 SWLD 154


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.316    0.133    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 865,597,161
Number of extensions: 25704254
Number of successful extensions: 61343
Number of sequences better than 10.0: 1727
Number of HSP's gapped: 60354
Number of HSP's successfully gapped: 1727
Length of query: 170
Length of database: 4,236,830,644
Length adjustment: 128
Effective length of query: 42
Effective length of database: 2,635,824,052
Effective search space: 110704610184
Effective search space used: 110704610184
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)