BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3061 (666 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QWT9|A0QWT9_MYCS2 Tax_Id=246196 (priA)SubName: Full=Primoso... 1124 0.0 tr|A1T8J1|A1T8J1_MYCVP Tax_Id=350058 SubName: Full=Replication r... 877 0.0 tr|Q1B9E6|Q1B9E6_MYCSS Tax_Id=164756 SubName: Full=Replication r... 863 0.0 tr|A3PZ78|A3PZ78_MYCSJ Tax_Id=164757 SubName: Full=Replication r... 863 0.0 tr|A1UFL7|A1UFL7_MYCSK Tax_Id=189918 SubName: Full=Replication r... 863 0.0 tr|A4TBZ5|A4TBZ5_MYCGI Tax_Id=350054 SubName: Full=Replication r... 845 0.0 tr|B2HP56|B2HP56_MYCMM Tax_Id=216594 (priA)SubName: Full=Primoso... 803 0.0 tr|A0PPK4|A0PPK4_MYCUA Tax_Id=362242 (priA)SubName: Full=Primoso... 803 0.0 tr|A0QI19|A0QI19_MYCA1 Tax_Id=243243 (priA)SubName: Full=Primoso... 803 0.0 tr|Q741G1|Q741G1_MYCPA Tax_Id=1770 (priA)SubName: Full=PriA;[Myc... 785 0.0 tr|B1MCC1|B1MCC1_MYCA9 Tax_Id=561007 SubName: Full=Putative prim... 781 0.0 tr|A2VHT3|A2VHT3_MYCTU Tax_Id=348776 SubName: Full=Primosomal pr... 771 0.0 sp|P0A5A5|PRIA_MYCTU Tax_Id=1773 (priA)RecName: Full=Putative pr... 767 0.0 sp|P0A5A6|PRIA_MYCBO Tax_Id=1765 (priA)RecName: Full=Putative pr... 767 0.0 tr|C6DTI1|C6DTI1_MYCTK Tax_Id=478434 SubName: Full=Primosomal pr... 767 0.0 tr|C1AN47|C1AN47_MYCBT Tax_Id=561275 (priA)SubName: Full=Primoso... 767 0.0 tr|A5WM85|A5WM85_MYCTF Tax_Id=336982 SubName: Full=Primosomal pr... 767 0.0 tr|A5U2A4|A5U2A4_MYCTA Tax_Id=419947 (priA)SubName: Full=Primoso... 767 0.0 tr|A1KIJ1|A1KIJ1_MYCBP Tax_Id=410289 (priA)SubName: Full=Putativ... 767 0.0 tr|D6GA05|D6GA05_MYCTU Tax_Id=478435 SubName: Full=Primosomal pr... 767 0.0 tr|D6FS33|D6FS33_MYCTU Tax_Id=611304 SubName: Full=Primosomal pr... 767 0.0 tr|D5YR38|D5YR38_MYCTU Tax_Id=515616 SubName: Full=Primosome ass... 767 0.0 tr|D5ZFH1|D5ZFH1_MYCTU Tax_Id=537210 SubName: Full=Primosomal pr... 764 0.0 sp|Q9CCQ3|PRIA_MYCLE Tax_Id=1769 (priA)RecName: Full=Putative pr... 756 0.0 tr|B8ZUM3|B8ZUM3_MYCLB Tax_Id=561304 (priA)SubName: Full=Putativ... 756 0.0 tr|Q0S0L3|Q0S0L3_RHOSR Tax_Id=101510 SubName: Full=Probable prim... 673 0.0 tr|C1B4J8|C1B4J8_RHOOB Tax_Id=632772 (priA)SubName: Full=Primoso... 659 0.0 tr|C3JSU6|C3JSU6_RHOER Tax_Id=596309 (priA)SubName: Full=Primoso... 644 0.0 tr|C0ZZD5|C0ZZD5_RHOE4 Tax_Id=234621 (priA)SubName: Full=Putativ... 640 0.0 tr|D5PM21|D5PM21_COREQ Tax_Id=525370 (priA)SubName: Full=DNA rep... 639 0.0 tr|D0LCS0|D0LCS0_GORB4 Tax_Id=526226 SubName: Full=Primosomal pr... 616 e-174 tr|D5PHV5|D5PHV5_9MYCO Tax_Id=525368 (priA)SubName: Full=DNA rep... 604 e-170 tr|Q5YTN1|Q5YTN1_NOCFA Tax_Id=37329 (priA)SubName: Full=Putative... 597 e-168 tr|D5URX2|D5URX2_TSUPA Tax_Id=521096 SubName: Full=Primosomal pr... 585 e-165 tr|C7MSK4|C7MSK4_SACVD Tax_Id=471857 SubName: Full=Primosomal pr... 575 e-161 tr|C6W8Y3|C6W8Y3_ACTMD Tax_Id=446462 SubName: Full=Primosomal pr... 573 e-161 tr|A4FBI9|A4FBI9_SACEN Tax_Id=405948 (priA)SubName: Full=Primoso... 570 e-160 tr|D1A823|D1A823_THECD Tax_Id=471852 SubName: Full=Primosomal pr... 556 e-156 tr|Q0RF88|Q0RF88_FRAAA Tax_Id=326424 (priA)SubName: Full=Primoso... 546 e-153 tr|C4RHQ8|C4RHQ8_9ACTO Tax_Id=219305 SubName: Full=Putative unch... 539 e-151 tr|Q8FT49|Q8FT49_COREF Tax_Id=152794 SubName: Full=Putative unch... 539 e-151 tr|C8NP31|C8NP31_COREF Tax_Id=196164 (priA)SubName: Full=Primoso... 539 e-151 tr|Q47R06|Q47R06_THEFY Tax_Id=269800 SubName: Full=Primosomal pr... 535 e-150 tr|Q6NH21|Q6NH21_CORDI Tax_Id=1717 SubName: Full=Putative primos... 534 e-149 tr|Q8NQ45|Q8NQ45_CORGL Tax_Id=1718 (priA)SubName: Full=Primosoma... 533 e-149 >tr|A0QWT9|A0QWT9_MYCS2 Tax_Id=246196 (priA)SubName: Full=Primosomal protein N';[Mycobacterium smegmatis] Length = 666 Score = 1124 bits (2908), Expect = 0.0 Identities = 580/666 (87%), Positives = 580/666 (87%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI Sbjct: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV Sbjct: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 Query: 121 EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA 180 EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA Sbjct: 121 EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA 180 Query: 181 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA 240 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA Sbjct: 181 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA 240 Query: 241 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY 300 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY Sbjct: 241 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY 300 Query: 301 ARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQA 360 ARTAEAHALVRTRWAHDL LEESRYQQERDPAAHSARLPSMALQA Sbjct: 301 ARTAEAHALVRTRWAHDLVATRSVVRSVAPRVVALEESRYQQERDPAAHSARLPSMALQA 360 Query: 361 ARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRA 420 ARTALDADRPVLIQVPRRGYVP GPLALPDRDSAAAQCRWCGRA Sbjct: 361 ARTALDADRPVLIQVPRRGYVPALACARCRTVTRCRHCTGPLALPDRDSAAAQCRWCGRA 420 Query: 421 EPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTP 480 EPALRCARCGSD EELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTP Sbjct: 421 EPALRCARCGSDAVRAVVVGARRTAEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTP 480 Query: 481 GAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESV 540 GAEP RQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESV Sbjct: 481 GAEPAADGGYGAALLLDAWALLGRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESV 540 Query: 541 LPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERL 600 LPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERL Sbjct: 541 LPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERL 600 Query: 601 GPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQI 660 GPVDLPFGARRPPGLDADAEVSRMLVRVP HDQEPSRVQI Sbjct: 601 GPVDLPFGARRPPGLDADAEVSRMLVRVPRAGGLALAAALRRATAVLSARHDQEPSRVQI 660 Query: 661 DPLHIG 666 DPLHIG Sbjct: 661 DPLHIG 666 >tr|A1T8J1|A1T8J1_MYCVP Tax_Id=350058 SubName: Full=Replication restart DNA helicase PriA;[Mycobacterium vanbaalenii] Length = 666 Score = 877 bits (2265), Expect = 0.0 Identities = 448/666 (67%), Positives = 498/666 (74%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 MT+TR+AAEHEP+ARVLPML+VPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVDAFI Sbjct: 1 MTITRQAAEHEPVARVLPMLTVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDAFI 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 LERRSDTDH G+LGWL+KVVS E VLT DVRRLVDAVAARYAGTRPDVLRLA+PPRHA Sbjct: 61 LERRSDTDHVGKLGWLEKVVSAECVLTHDVRRLVDAVAARYAGTRPDVLRLAVPPRHANA 120 Query: 121 EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA 180 EK+ P+ V++ W Y+ G QF+ ALG+GRAARAVWQALPGE WPQRLAEA Sbjct: 121 EKKIREPLAPLTPATVETPAWQAYSGGPQFIAALGDGRAARAVWQALPGESWPQRLAEAG 180 Query: 181 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA 240 A TV++G+GVLA++PDQRD+D LHAA HV RVVALSAGLGP+ RYRRWLA LRG A Sbjct: 181 AVTVHSGRGVLAVVPDQRDIDTLHAAAVEHVDADRVVALSAGLGPAERYRRWLAVLRGDA 240 Query: 241 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY 300 R VIGTRSAVFAPVADLGL+++WDDGDD+L+EPRAPYPHAREVAMLRAHQ+RCAA+IGGY Sbjct: 241 RFVIGTRSAVFAPVADLGLVMLWDDGDDSLSEPRAPYPHAREVAMLRAHQVRCAAMIGGY 300 Query: 301 ARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQA 360 ARTAEAHALV + WAHDL LE+S Y QERDPAA +ARLP++AL A Sbjct: 301 ARTAEAHALVHSGWAHDLTATRQTVRVHSPRVIALEDSAYAQERDPAARTARLPTVALDA 360 Query: 361 ARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRA 420 AR AL D PVL+QVPRRGYVP GPL+LP RD+ A CRWCGR Sbjct: 361 ARKALAGDAPVLVQVPRRGYVPALACARCRSVARCRHCTGPLSLPGRDAPGALCRWCGRE 420 Query: 421 EPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTP 480 EPALRC RCGSD EELGRAFPGTPV+TSGGD V+ V A+VV+TP Sbjct: 421 EPALRCTRCGSDAVRAVVVGARRTAEELGRAFPGTPVVTSGGDDAVATVPQRAAVVVATP 480 Query: 481 GAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESV 540 G EP RQDLRAAED LRRWMAAAALVR RADGGVVAVVA+S Sbjct: 481 GVEPRADGGYGAALLLDTWALLGRQDLRAAEDALRRWMAAAALVRSRADGGVVAVVADSS 540 Query: 541 LPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERL 600 +PTVQALIRWDPVGHA++EL SRGEVGLPPAVHMAAVDG +AV ALL A LP+ A+ L Sbjct: 541 IPTVQALIRWDPVGHAESELASRGEVGLPPAVHMAAVDGPSQAVNALLGAAALPQTADVL 600 Query: 601 GPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQI 660 GPVDLP GARRP GLD D V+RMLVRVP HDQEP RVQI Sbjct: 601 GPVDLPLGARRPAGLDTDMPVNRMLVRVPRDDGLALAAALRRATAVQSARHDQEPVRVQI 660 Query: 661 DPLHIG 666 DPLHIG Sbjct: 661 DPLHIG 666 >tr|Q1B9E6|Q1B9E6_MYCSS Tax_Id=164756 SubName: Full=Replication restart DNA helicase PriA;[Mycobacterium sp.] Length = 665 Score = 863 bits (2229), Expect = 0.0 Identities = 451/669 (67%), Positives = 501/669 (74%), Gaps = 7/669 (1%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 MT TR+ AEHEPIARVLPMLSVPHLDREFDYLV E SD+AQPGVR +VRFHGRLVDAF+ Sbjct: 1 MTKTRQPAEHEPIARVLPMLSVPHLDREFDYLVPAECSDDAQPGVRVRVRFHGRLVDAFL 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 LERRS+TDH G+LGWLD+VVSP+ VLT DVRRLVDAVAARYAGTRPDVLRLA+PPRHA Sbjct: 61 LERRSETDHPGQLGWLDRVVSPQQVLTPDVRRLVDAVAARYAGTRPDVLRLAVPPRHAGA 120 Query: 121 EKQTPAEPEPIPAIDV---DSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLA 177 EK+ AE +PA+DV D + W Y R EQFL A+GEGRAARAVWQALPGE+W RLA Sbjct: 121 EKKPAAE---LPAVDVPAIDLTAWRAYPRAEQFLGAVGEGRAARAVWQALPGERWATRLA 177 Query: 178 EAAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALR 237 EAAA TV +G+GVLAI+PDQRDVDALHAA + + RVVALSAGLGPS RYRRWL+ LR Sbjct: 178 EAAALTVGSGRGVLAIVPDQRDVDALHAAAVTLLADERVVALSAGLGPSQRYRRWLSVLR 237 Query: 238 GHARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVI 297 G AR VIGTRSAVFAPV DLGL++VWDDGDD+LAEPRAPYPHAREVAMLRAHQLRCAA+I Sbjct: 238 GGARFVIGTRSAVFAPVCDLGLVMVWDDGDDSLAEPRAPYPHAREVAMLRAHQLRCAALI 297 Query: 298 GGYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMA 357 GG++RTAE+ ALVR+RWAHDL LE+S ++QERDPAAH+ARLPS+A Sbjct: 298 GGHSRTAESQALVRSRWAHDLVAPRPVVRAAAPRVIALEDSGFEQERDPAAHTARLPSVA 357 Query: 358 LQAARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWC 417 L+ AR AL A RPVL+QVPRRGY+P GPL+L +R AA CRWC Sbjct: 358 LRTARAALQAGRPVLVQVPRRGYLPALACARCRAIARCRHCTGPLSLLER-GGAAMCRWC 416 Query: 418 GRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVV 477 GR E LRC RCGSD EELGRAF GTPV+TS G+ +V V ALVV Sbjct: 417 GREELGLRCGRCGSDSVRAVAVGARRTAEELGRAFAGTPVVTSSGEAMVGTVADEPALVV 476 Query: 478 STPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVA 537 +TPGAEP RQDLRAAEDTLRRWMAAAALVR RADGGVV VVA Sbjct: 477 ATPGAEPEPAAGYGAALLLDGWALLGRQDLRAAEDTLRRWMAAAALVRSRADGGVVTVVA 536 Query: 538 ESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGA 597 ES +PTVQALIRWDPVGHA++ELDSR EVGLPPAVH+AAVDG AVTALL+ A LP+ A Sbjct: 537 ESAIPTVQALIRWDPVGHAESELDSRSEVGLPPAVHIAAVDGDFAAVTALLETADLPDDA 596 Query: 598 ERLGPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSR 657 E LGPVDLP GARRPPG DA VSRMLVRVP HD EP+R Sbjct: 597 ETLGPVDLPVGARRPPGTSPDAAVSRMLVRVPRDRGLALAAALRRGTGVLSARHDTEPAR 656 Query: 658 VQIDPLHIG 666 VQIDPLHIG Sbjct: 657 VQIDPLHIG 665 >tr|A3PZ78|A3PZ78_MYCSJ Tax_Id=164757 SubName: Full=Replication restart DNA helicase PriA;[Mycobacterium sp.] Length = 665 Score = 863 bits (2229), Expect = 0.0 Identities = 451/669 (67%), Positives = 501/669 (74%), Gaps = 7/669 (1%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 MT TR+ AEHEPIARVLPMLSVPHLDREFDYLV E SD+AQPGVR +VRFHGRLVDAF+ Sbjct: 1 MTKTRQPAEHEPIARVLPMLSVPHLDREFDYLVPAECSDDAQPGVRVRVRFHGRLVDAFL 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 LERRS+TDH G+LGWLD+VVSP+ VLT DVRRLVDAVAARYAGTRPDVLRLA+PPRHA Sbjct: 61 LERRSETDHPGQLGWLDRVVSPQQVLTPDVRRLVDAVAARYAGTRPDVLRLAVPPRHAGA 120 Query: 121 EKQTPAEPEPIPAIDV---DSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLA 177 EK+ AE +PA+DV D + W Y R EQFL A+GEGRAARAVWQALPGE+W RLA Sbjct: 121 EKKPAAE---LPAVDVPAIDLTAWRAYPRAEQFLGAVGEGRAARAVWQALPGERWATRLA 177 Query: 178 EAAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALR 237 EAAA TV +G+GVLAI+PDQRDVDALHAA + + RVVALSAGLGPS RYRRWL+ LR Sbjct: 178 EAAALTVGSGRGVLAIVPDQRDVDALHAAAVTLLADERVVALSAGLGPSQRYRRWLSVLR 237 Query: 238 GHARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVI 297 G AR VIGTRSAVFAPV DLGL++VWDDGDD+LAEPRAPYPHAREVAMLRAHQLRCAA+I Sbjct: 238 GGARFVIGTRSAVFAPVCDLGLVMVWDDGDDSLAEPRAPYPHAREVAMLRAHQLRCAALI 297 Query: 298 GGYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMA 357 GG++RTAE+ ALVR+RWAHDL LE+S ++QERDPAAH+ARLPS+A Sbjct: 298 GGHSRTAESQALVRSRWAHDLVAPRPVVRAAAPRVIALEDSGFEQERDPAAHTARLPSVA 357 Query: 358 LQAARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWC 417 L+ AR AL A RPVL+QVPRRGY+P GPL+L +R AA CRWC Sbjct: 358 LRTARAALQAGRPVLVQVPRRGYLPALACARCRAIARCRHCTGPLSLLER-GGAAMCRWC 416 Query: 418 GRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVV 477 GR E LRC RCGSD EELGRAF GTPV+TS G+ +V V ALVV Sbjct: 417 GREELGLRCGRCGSDSVRAVAVGARRTAEELGRAFAGTPVVTSSGEAMVGTVADEPALVV 476 Query: 478 STPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVA 537 +TPGAEP RQDLRAAEDTLRRWMAAAALVR RADGGVV VVA Sbjct: 477 ATPGAEPEPAAGYGAALLLDGWALLGRQDLRAAEDTLRRWMAAAALVRSRADGGVVTVVA 536 Query: 538 ESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGA 597 ES +PTVQALIRWDPVGHA++ELDSR EVGLPPAVH+AAVDG AVTALL+ A LP+ A Sbjct: 537 ESAIPTVQALIRWDPVGHAESELDSRSEVGLPPAVHIAAVDGDFAAVTALLETADLPDDA 596 Query: 598 ERLGPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSR 657 E LGPVDLP GARRPPG DA VSRMLVRVP HD EP+R Sbjct: 597 ETLGPVDLPVGARRPPGTSPDAAVSRMLVRVPRDRGLALAAALRRGTGVLSARHDTEPAR 656 Query: 658 VQIDPLHIG 666 VQIDPLHIG Sbjct: 657 VQIDPLHIG 665 >tr|A1UFL7|A1UFL7_MYCSK Tax_Id=189918 SubName: Full=Replication restart DNA helicase PriA;[Mycobacterium sp.] Length = 665 Score = 863 bits (2229), Expect = 0.0 Identities = 451/669 (67%), Positives = 501/669 (74%), Gaps = 7/669 (1%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 MT TR+ AEHEPIARVLPMLSVPHLDREFDYLV E SD+AQPGVR +VRFHGRLVDAF+ Sbjct: 1 MTKTRQPAEHEPIARVLPMLSVPHLDREFDYLVPAECSDDAQPGVRVRVRFHGRLVDAFL 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 LERRS+TDH G+LGWLD+VVSP+ VLT DVRRLVDAVAARYAGTRPDVLRLA+PPRHA Sbjct: 61 LERRSETDHPGQLGWLDRVVSPQQVLTPDVRRLVDAVAARYAGTRPDVLRLAVPPRHAGA 120 Query: 121 EKQTPAEPEPIPAIDV---DSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLA 177 EK+ AE +PA+DV D + W Y R EQFL A+GEGRAARAVWQALPGE+W RLA Sbjct: 121 EKKPAAE---LPAVDVPAIDLTAWRAYPRAEQFLGAVGEGRAARAVWQALPGERWATRLA 177 Query: 178 EAAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALR 237 EAAA TV +G+GVLAI+PDQRDVDALHAA + + RVVALSAGLGPS RYRRWL+ LR Sbjct: 178 EAAALTVGSGRGVLAIVPDQRDVDALHAAAVTLLADERVVALSAGLGPSQRYRRWLSVLR 237 Query: 238 GHARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVI 297 G AR VIGTRSAVFAPV DLGL++VWDDGDD+LAEPRAPYPHAREVAMLRAHQLRCAA+I Sbjct: 238 GGARFVIGTRSAVFAPVCDLGLVMVWDDGDDSLAEPRAPYPHAREVAMLRAHQLRCAALI 297 Query: 298 GGYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMA 357 GG++RTAE+ ALVR+RWAHDL LE+S ++QERDPAAH+ARLPS+A Sbjct: 298 GGHSRTAESQALVRSRWAHDLVAPRPVVRAAAPRVIALEDSGFEQERDPAAHTARLPSVA 357 Query: 358 LQAARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWC 417 L+ AR AL A RPVL+QVPRRGY+P GPL+L +R AA CRWC Sbjct: 358 LRTARAALQAGRPVLVQVPRRGYLPALACARCRAIARCRHCTGPLSLLER-GGAAMCRWC 416 Query: 418 GRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVV 477 GR E LRC RCGSD EELGRAF GTPV+TS G+ +V V ALVV Sbjct: 417 GREELGLRCGRCGSDSVRAVAVGARRTAEELGRAFAGTPVVTSSGEAMVGTVADEPALVV 476 Query: 478 STPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVA 537 +TPGAEP RQDLRAAEDTLRRWMAAAALVR RADGGVV VVA Sbjct: 477 ATPGAEPEPAAGYGAALLLDGWALLGRQDLRAAEDTLRRWMAAAALVRSRADGGVVTVVA 536 Query: 538 ESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGA 597 ES +PTVQALIRWDPVGHA++ELDSR EVGLPPAVH+AAVDG AVTALL+ A LP+ A Sbjct: 537 ESAIPTVQALIRWDPVGHAESELDSRSEVGLPPAVHIAAVDGDFAAVTALLETADLPDDA 596 Query: 598 ERLGPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSR 657 E LGPVDLP GARRPPG DA VSRMLVRVP HD EP+R Sbjct: 597 ETLGPVDLPVGARRPPGTSPDAAVSRMLVRVPRDRGLALAAALRRGTGVLSARHDTEPAR 656 Query: 658 VQIDPLHIG 666 VQIDPLHIG Sbjct: 657 VQIDPLHIG 665 >tr|A4TBZ5|A4TBZ5_MYCGI Tax_Id=350054 SubName: Full=Replication restart DNA helicase PriA;[Mycobacterium gilvum] Length = 648 Score = 845 bits (2184), Expect = 0.0 Identities = 435/648 (67%), Positives = 480/648 (74%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 ML+VPHLDREFDYLV E SD+AQPGVRAKVRFHGRLVDAF+LERRSDTDH G+LGWLDK Sbjct: 1 MLTVPHLDREFDYLVPAEQSDDAQPGVRAKVRFHGRLVDAFVLERRSDTDHVGKLGWLDK 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 +VSPE VLT DVRRLVDAVAARYAGTR DVLRLA+PPRHATVEK+ P EP VD+ Sbjct: 61 IVSPECVLTHDVRRLVDAVAARYAGTRADVLRLAVPPRHATVEKKPPVSVEPFTVAPVDT 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 + WA Y+ G QF++AL + RAARAVWQALPGE WP RLAEAAA TV AG+GVLA++PDQR Sbjct: 121 AAWAAYSGGAQFVSALQDARAARAVWQALPGETWPHRLAEAAAVTVGAGRGVLAVVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 DVD LHAA V RVVALSAGLGP+ RYRRWL+ LRG ARVVIGTRSAVFAPVADLG Sbjct: 181 DVDLLHAAAIERVDAGRVVALSAGLGPAERYRRWLSVLRGQARVVIGTRSAVFAPVADLG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L+L+WDDGDD+LAEPRAPYPHAREVAMLRAHQLRCAA++GGYARTAEA ALVR+ WAHDL Sbjct: 241 LVLMWDDGDDSLAEPRAPYPHAREVAMLRAHQLRCAAMVGGYARTAEAQALVRSGWAHDL 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 LE+S Y ERD AA +ARLP++AL AAR+AL A+ PVL+QVPRR Sbjct: 301 TATRQTVRAHAPRVIALEDSAYAHERDAAARTARLPTVALDAARSALAANMPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GYVP GPL+LP RD+ CRWCGR EP++RCARCGSD Sbjct: 361 GYVPALSCAKCRAVARCRHCTGPLSLPARDAPGVVCRWCGREEPSMRCARCGSDAIRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPG VITSGGD VV+ V A+VV+TPG EP Sbjct: 421 VGARRTAEELGRAFPGAQVITSGGDDVVASVPQRAAVVVATPGVEPVADGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAEDTLRRWMAA+A+VR RADGGVVAVVAES +PTVQALIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDTLRRWMAASAMVRSRADGGVVAVVAESAIPTVQALIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGLDAD 618 ELD R EVGLPPA HMAA+DG P AV ALL A LP+GAE LGPVDLP GARRP G+ D Sbjct: 541 ELDGRTEVGLPPATHMAALDGVPAAVDALLHAAALPDGAEVLGPVDLPVGARRPAGIAVD 600 Query: 619 AEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 VSRMLVRVP HD EP RVQIDPLHIG Sbjct: 601 VTVSRMLVRVPRDGGLELAAALRRATVVQSARHDHEPVRVQIDPLHIG 648 >tr|B2HP56|B2HP56_MYCMM Tax_Id=216594 (priA)SubName: Full=Primosomal protein N' PriA;[Mycobacterium marinum] Length = 648 Score = 803 bits (2075), Expect = 0.0 Identities = 415/648 (64%), Positives = 466/648 (71%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVD F+LERR+DTDH+G+LGWLD+ Sbjct: 1 MLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFVLERRNDTDHQGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVS E VLT ++RRLVDAVAARYAGTRPDVLRLA+P RHA VE++ P+ VD Sbjct: 61 VVSAEQVLTPEIRRLVDAVAARYAGTRPDVLRLAVPARHARVEREVATRPDLPEVAPVDG 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 +GWA Y RG QFL ALGE RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 AGWAGYGRGGQFLDALGEARAARAVWQALPGEPWADRFAEAAAQTVRAGRAVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A T + E V ALSAGLGP+ARYRRWLAALRG AR+VIGTRSAVFAP++DLG Sbjct: 181 DLDELWRAATTRIDERSVAALSAGLGPAARYRRWLAALRGGARLVIGTRSAVFAPLSDLG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW DGDD LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADGDDTLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDI 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y ERDPAA +ARLPS+AL AAR++L A PVL+QVPRR Sbjct: 301 VAARQVVRARTPRVIALDDSGYADERDPAARTARLPSIALHAARSSLQAGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GYVP GPL+LP+R + A CRWCG EP LRC RCGSD Sbjct: 361 GYVPSLACGRCRAIARCRHCTGPLSLPERGAPGAVCRWCGHGEPLLRCTRCGSDTVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GD +V DV ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTSVITSAGDAIVPDVDARPALVVATPGAEPRAAGGYGAALLLDT 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAE+ L RWMAAAALVR RADGGVVAVVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEEALCRWMAAAALVRSRADGGVVAVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGLDAD 618 EL++R EVGLPP+VH+AA+DGT +AV ALLD A LPE A+ LGPVDLP G RRP G Sbjct: 541 ELEARSEVGLPPSVHIAAIDGTAEAVLALLDQARLPEDADMLGPVDLPPGVRRPAGTPDG 600 Query: 619 AEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 V+RMLVRV EP RVQIDPLHIG Sbjct: 601 VPVTRMLVRVRREQGLELAGCLRRGVGVLSARQTHEPVRVQIDPLHIG 648 >tr|A0PPK4|A0PPK4_MYCUA Tax_Id=362242 (priA)SubName: Full=Primosomal protein N' PriA;[Mycobacterium ulcerans] Length = 648 Score = 803 bits (2075), Expect = 0.0 Identities = 415/648 (64%), Positives = 465/648 (71%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVD F+LERR+DTDH+G+LGWLD+ Sbjct: 1 MLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFVLERRNDTDHQGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVS E VLT ++RRLVDAVAARYAGTRPDVLRLA+P RHA VE++ P+ VD Sbjct: 61 VVSAEQVLTPEIRRLVDAVAARYAGTRPDVLRLAVPARHARVEREVATRPDLPEVAPVDG 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 +GWA Y RG QFL ALGE RAARAVWQALPGE W R AEAAA TV G+ VLAI+PDQR Sbjct: 121 AGWAGYGRGGQFLDALGEARAARAVWQALPGEPWADRFAEAAAQTVRTGRAVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A T + E V ALSAGLGP+ARYRRWLAALRG AR+VIGTRSAVFAP++DLG Sbjct: 181 DLDELWRAATTRIDERSVAALSAGLGPAARYRRWLAALRGGARLVIGTRSAVFAPLSDLG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW DGDD LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADGDDTLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDI 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y ERDPAA +ARLPS+AL AAR++L A PVL+QVPRR Sbjct: 301 VAARQVVRARTPRVIALDDSGYADERDPAARTARLPSIALHAARSSLQAGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GYVP GPL+LP+R + A CRWCG EP LRC RCGSD Sbjct: 361 GYVPSLACGRCRAIARCRHCTGPLSLPERGAPGAVCRWCGHGEPLLRCTRCGSDTVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GD +V DV ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTSVITSAGDAIVPDVDARPALVVATPGAEPRAAGGYGAALLLDT 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAE+ L RWMAAAALVR RADGGVVAVVAES +PTVQ+LIRWDPVGHADA Sbjct: 481 WALLGRQDLRAAEEALCRWMAAAALVRSRADGGVVAVVAESSIPTVQSLIRWDPVGHADA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGLDAD 618 EL++R EVGLPP+VH+AA+DGT +AV ALLD A LPE A+ LGPVDLP G RRP G Sbjct: 541 ELEARSEVGLPPSVHIAAIDGTAEAVLALLDQARLPEDADMLGPVDLPPGVRRPAGTPDG 600 Query: 619 AEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 V+RMLVRV EP RVQIDPLHIG Sbjct: 601 VPVTRMLVRVRREQGLELAGCLRRGVGVLGARQTHEPVRVQIDPLHIG 648 >tr|A0QI19|A0QI19_MYCA1 Tax_Id=243243 (priA)SubName: Full=Primosomal protein N';[Mycobacterium avium] Length = 674 Score = 803 bits (2073), Expect = 0.0 Identities = 428/670 (63%), Positives = 476/670 (71%), Gaps = 9/670 (1%) Query: 5 RRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERR 64 R E EPIARVLPMLSVPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVD F+LERR Sbjct: 6 RTPVEVEPIARVLPMLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFLLERR 65 Query: 65 SDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQT 124 DTDH+G+LGWLD+VVSPEPVLT ++RRLVDAVAARYAGTRPDVLRLA+P RHA VE++ Sbjct: 66 HDTDHQGKLGWLDRVVSPEPVLTAEIRRLVDAVAARYAGTRPDVLRLAVPARHARVEREA 125 Query: 125 PAEPE-PIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAAT 183 A P+PA VD SGW Y RG QFL AL E RAARAVWQALPGE W R AEAAA T Sbjct: 126 RAAAGIPMPA-PVDPSGWEGYGRGAQFLAALAESRAARAVWQALPGEPWTDRFAEAAAQT 184 Query: 184 VNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVV 243 V AG+ VLAI+PDQRD+DAL AVT + + VVALSAGLGP+ARYRRWLAALRG ARVV Sbjct: 185 VRAGRSVLAIVPDQRDLDALSHAVTTRIDAAGVVALSAGLGPAARYRRWLAALRGSARVV 244 Query: 244 IGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYART 303 IGTRSAVFAP++DLGL++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYART Sbjct: 245 IGTRSAVFAPLSDLGLVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYART 304 Query: 304 AEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAART 363 AEA ALVR+ WAHD+ L+++ Y ERDPAA +AR+PS+AL+AAR+ Sbjct: 305 AEAQALVRSGWAHDIVAARPVVRARTPRVIALDDTGYADERDPAARTARIPSVALRAARS 364 Query: 364 ALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLAL---PDRDSAAAQCRWCGRA 420 AL PVL+QVPRRGYVP GPL+L P CRWCGR Sbjct: 365 ALQHGAPVLVQVPRRGYVPSLACARCRTIARCRHCTGPLSLAESPGEGGGGLVCRWCGRV 424 Query: 421 EPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTP 480 +P RCARCGSD EELGRAF GT VITS GD VV +V ALVV+TP Sbjct: 425 DPTRRCARCGSDAVRAVVVGARRTAEELGRAFAGTTVITSSGDAVVPEVADGPALVVATP 484 Query: 481 GAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESV 540 GAEP RQDLRAAED L RWM AAALVRPR DGGVV VVAE+ Sbjct: 485 GAEPRARGDYGAALLLDTWALLGRQDLRAAEDALWRWMTAAALVRPRGDGGVVMVVAETS 544 Query: 541 LPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEG---- 596 LPTVQ+LIRWDPVGHA++EL +R EVGLPP+VHMAAVDGTP AV ALLD A L G Sbjct: 545 LPTVQSLIRWDPVGHAESELTARAEVGLPPSVHMAAVDGTPAAVNALLDEAGLTGGQTLH 604 Query: 597 AERLGPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS 656 A+ LGPVDLP GARRP G A V+RMLVRVP EP+ Sbjct: 605 ADLLGPVDLPPGARRPAGTPPGAPVTRMLVRVPRRDGLALAAALRRGVGVLSARQTHEPA 664 Query: 657 RVQIDPLHIG 666 RVQIDPLHIG Sbjct: 665 RVQIDPLHIG 674 >tr|Q741G1|Q741G1_MYCPA Tax_Id=1770 (priA)SubName: Full=PriA;[Mycobacterium paratuberculosis] Length = 655 Score = 785 bits (2027), Expect = 0.0 Identities = 418/656 (63%), Positives = 466/656 (71%), Gaps = 9/656 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVD F+LERR DTDH+G+LGWLD+ Sbjct: 1 MLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFLLERRHDTDHQGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPE-PIPAIDVD 137 VVSPEPVLT ++RRLVDAVAARYAGTRPDVLRLA+P RHA VE++ A P+PA VD Sbjct: 61 VVSPEPVLTAEIRRLVDAVAARYAGTRPDVLRLAVPARHARVEREARAAAGIPMPA-PVD 119 Query: 138 SSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQ 197 SGW Y RG QFL AL E RAARAVWQALPGE W R AEAAA TV G+ VLAI+PDQ Sbjct: 120 PSGWDGYGRGAQFLAALAESRAARAVWQALPGEPWTDRFAEAAAQTVRTGRSVLAIVPDQ 179 Query: 198 RDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADL 257 RD+DAL AVT+ + + VVALSAGLGP+ARYRRWLAALRG ARVVIGTRSAVFAP++DL Sbjct: 180 RDLDALSHAVTSRIDATGVVALSAGLGPAARYRRWLAALRGSARVVIGTRSAVFAPLSDL 239 Query: 258 GLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHD 317 GL++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEA ALVR+ WAHD Sbjct: 240 GLVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAQALVRSGWAHD 299 Query: 318 LXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPR 377 + L+++ Y ERDPAA +AR+PS+AL+AAR+AL PVL+QVPR Sbjct: 300 IVAARPVVRARTPRVIALDDTGYADERDPAARTARIPSVALRAARSALQDGAPVLVQVPR 359 Query: 378 RGYVPXXXXXXXXXXXXXXXXXGPLAL---PDRDSAAAQCRWCGRAEPALRCARCGSDXX 434 RGYVP GPL+L P CRWCGR +P RCARCGSD Sbjct: 360 RGYVPSLACARCRTIARCRHCTGPLSLAESPGEGGGGLVCRWCGRVDPTRRCARCGSDAV 419 Query: 435 XXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXX 494 EELGRAF GT VITS GD VV +V ALVV+TPGAEP Sbjct: 420 RAVVVGARRTAEELGRAFAGTTVITSSGDAVVPEVADGPALVVATPGAEPRARGDYGAAL 479 Query: 495 XXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVG 554 RQDLRAAED L RWM AAALVRPR DGGVV VVAES LPTVQ+LIRWDPVG Sbjct: 480 LLDTWALLGRQDLRAAEDALWRWMTAAALVRPRGDGGVVMVVAESSLPTVQSLIRWDPVG 539 Query: 555 HADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEG----AERLGPVDLPFGAR 610 HA++EL +R EVGLPP+VHMAAVDGTP AV ALLD A L G A+ LGPVDLP GAR Sbjct: 540 HAESELTARAEVGLPPSVHMAAVDGTPAAVNALLDEAGLTGGQTLHADLLGPVDLPPGAR 599 Query: 611 RPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 RP G A V+RMLVRVP EP+RVQIDPLHIG Sbjct: 600 RPAGTPPGAPVTRMLVRVPRRDGLALAAALRRGVGVLSARQTHEPARVQIDPLHIG 655 >tr|B1MCC1|B1MCC1_MYCA9 Tax_Id=561007 SubName: Full=Putative primosomal protein N' (ATP-dependent helicase priA);[Mycobacterium abscessus] Length = 671 Score = 781 bits (2018), Expect = 0.0 Identities = 418/671 (62%), Positives = 464/671 (69%), Gaps = 5/671 (0%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 MT TR AEHEPIARVLP+L+VPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVDA + Sbjct: 1 MTATRVVAEHEPIARVLPLLTVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDAIL 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 LERRS++DH G+LGWLD+VVSP VLT DVRRLVDAVAARYAGTR DVLRLA+PPRHA V Sbjct: 61 LERRSESDHSGKLGWLDRVVSPTRVLTPDVRRLVDAVAARYAGTRADVLRLALPPRHARV 120 Query: 121 EKQTPAE-PEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEA 179 EK+ + +P D SGW+RY RGE+FL AL GRAARAVWQALPGE W RLAEA Sbjct: 121 EKENRVPGADGLPPETPDRSGWSRYQRGERFLDALTHGRAARAVWQALPGEAWCLRLAEA 180 Query: 180 AAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGH 239 A AT + G+GVLAI+PDQRD+DAL A + RVVALSA LGP+ RYRRWLA LRG Sbjct: 181 ARATASTGKGVLAIVPDQRDIDALSAECVKNFGVQRVVALSAELGPAERYRRWLAVLRGQ 240 Query: 240 ARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGG 299 A VVIGTR+AVFAPV DLGL++VWDDGDDNLAEPR+PYPHAR+VAMLRAHQLRCAAVIGG Sbjct: 241 ATVVIGTRAAVFAPVVDLGLVMVWDDGDDNLAEPRSPYPHARDVAMLRAHQLRCAAVIGG 300 Query: 300 YARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQ 359 YARTAE+ ALV WAHDL L++S Y QERDPAA SARLP +AL Sbjct: 301 YARTAESQALVEGGWAHDLVAARPTVRKSSARISALDDSGYAQERDPAARSARLPMVALT 360 Query: 360 AARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPD----RDSAAAQCR 415 AAR AL VL+QVPRRGYVP GPLA SA+ CR Sbjct: 361 AARDALKRGHSVLVQVPRRGYVPALACTKCRTVARCRHCTGPLAWEGPGGASHSASPSCR 420 Query: 416 WCGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRAL 475 WCGR + LRCARCGS EELGRA PG PV+TSGG V V G L Sbjct: 421 WCGRVDADLRCARCGSSAVRAVVVGARRTAEELGRALPGVPVVTSGGGEVHDTVTGPPTL 480 Query: 476 VVSTPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAV 535 VV TPGAEP RQDLRAAEDTLR+WMAAAALVR R +GG V V Sbjct: 481 VVCTPGAEPVTPGGYGAALLLDAWALLGRQDLRAAEDTLRKWMAAAALVRGRDEGGTVVV 540 Query: 536 VAESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE 595 VA+S L TVQALIRWDPVGHA EL +R EVGLPP VH+AAVDG +AV L+D A LPE Sbjct: 541 VADSSLSTVQALIRWDPVGHAATELAARAEVGLPPQVHIAAVDGPAQAVAGLIDTADLPE 600 Query: 596 GAERLGPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEP 655 GAE LGPV+LP GARRP G+ EV R+LVRV D +P Sbjct: 601 GAELLGPVELPLGARRPAGVPDSVEVVRILVRVERAAGLELAAALRRGVTTLSARRDAQP 660 Query: 656 SRVQIDPLHIG 666 RVQIDPLH+G Sbjct: 661 VRVQIDPLHVG 671 >tr|A2VHT3|A2VHT3_MYCTU Tax_Id=348776 SubName: Full=Primosomal protein N priA (Replication factor Y);[Mycobacterium tuberculosis C] Length = 658 Score = 771 bits (1992), Expect = 0.0 Identities = 408/658 (62%), Positives = 463/658 (70%), Gaps = 7/658 (1%) Query: 16 VLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGW 75 +LPMLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGW Sbjct: 1 MLPMLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGW 60 Query: 76 LDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAID 135 LD+VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P Sbjct: 61 LDRVVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAP 120 Query: 136 VDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMP 195 VD SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+P Sbjct: 121 VDPSGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVP 180 Query: 196 DQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVA 255 DQRD+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP++ Sbjct: 181 DQRDLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLS 240 Query: 256 DLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWA 315 +LGL++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WA Sbjct: 241 ELGLVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWA 300 Query: 316 HDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQV 375 HD+ L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QV Sbjct: 301 HDVVAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQV 360 Query: 376 PRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXX 435 PRRGY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 PRRGYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVR 420 Query: 436 XXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXX 495 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 AVVVGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALL 480 Query: 496 XXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGH 555 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGH Sbjct: 481 LDSWALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGH 540 Query: 556 ADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARR 611 A+AEL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RR Sbjct: 541 AEAELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRR 600 Query: 612 PPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 P G+ ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 PAGIPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 658 >sp|P0A5A5|PRIA_MYCTU Tax_Id=1773 (priA)RecName: Full=Putative primosomal protein N'; EC=3.6.4.-; AltName: Full=ATP-dependent helicase priA; AltName: Full=Replication factor Y;[Mycobacterium tuberculosis] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >sp|P0A5A6|PRIA_MYCBO Tax_Id=1765 (priA)RecName: Full=Putative primosomal protein N'; EC=3.6.4.-; AltName: Full=ATP-dependent helicase priA; AltName: Full=Replication factor Y;[Mycobacterium bovis] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|C6DTI1|C6DTI1_MYCTK Tax_Id=478434 SubName: Full=Primosomal protein N priA;[Mycobacterium tuberculosis] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|C1AN47|C1AN47_MYCBT Tax_Id=561275 (priA)SubName: Full=Primosomal assembly protein;[Mycobacterium bovis] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|A5WM85|A5WM85_MYCTF Tax_Id=336982 SubName: Full=Primosomal protein N priA (Replication factor Y);[Mycobacterium tuberculosis] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|A5U2A4|A5U2A4_MYCTA Tax_Id=419947 (priA)SubName: Full=Primosome assembly protein PriA;[Mycobacterium tuberculosis] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|A1KIJ1|A1KIJ1_MYCBP Tax_Id=410289 (priA)SubName: Full=Putative primosomal protein N' priA;[Mycobacterium bovis] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|D6GA05|D6GA05_MYCTU Tax_Id=478435 SubName: Full=Primosomal protein N priA;[Mycobacterium tuberculosis KZN 605] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|D6FS33|D6FS33_MYCTU Tax_Id=611304 SubName: Full=Primosomal protein N priA;[Mycobacterium tuberculosis K85] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCWAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|D5YR38|D5YR38_MYCTU Tax_Id=515616 SubName: Full=Primosome assembly protein PriA;[Mycobacterium tuberculosis 02_1987] Length = 655 Score = 767 bits (1980), Expect = 0.0 Identities = 406/655 (61%), Positives = 460/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P LRC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTLRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >tr|D5ZFH1|D5ZFH1_MYCTU Tax_Id=537210 SubName: Full=Primosomal protein N priA;[Mycobacterium tuberculosis T17] Length = 655 Score = 764 bits (1974), Expect = 0.0 Identities = 405/655 (61%), Positives = 459/655 (70%), Gaps = 7/655 (1%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDR+FDYLV E SD+AQPGVR +VRFHGRLVD F+LERRSD+DH G+LGWLD+ Sbjct: 1 MLSVPHLDRDFDYLVPAEHSDDAQPGVRVRVRFHGRLVDGFVLERRSDSDHHGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDVDS 138 VVSPEPVLTT++RRLVDAVAARYAGTR DVLRLA+P RHA VE++ P VD Sbjct: 61 VVSPEPVLTTEIRRLVDAVAARYAGTRQDVLRLAVPARHARVEREITTAPGRPVVAPVDP 120 Query: 139 SGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQR 198 SGWA Y RG QFL AL + RAARAVWQALPGE W R AEAAA TV AG+ VLAI+PDQR Sbjct: 121 SGWAAYGRGRQFLAALADSRAARAVWQALPGELWADRFAEAAAQTVRAGRTVLAIVPDQR 180 Query: 199 DVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLG 258 D+D L A TA V E VVALSAGLGP ARYRRWLAALRG AR+VIGTRSAVFAP+++LG Sbjct: 181 DLDTLWQAATALVDEHSVVALSAGLGPEARYRRWLAALRGSARLVIGTRSAVFAPLSELG 240 Query: 259 LILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDL 318 L++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEAHALVR+ WAHD+ Sbjct: 241 LVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAHALVRSGWAHDV 300 Query: 319 XXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRR 378 L++S Y RDPAA +ARLPS+AL+AAR+AL + PVL+QVPRR Sbjct: 301 VAPRPEVRARSPRVVALDDSGYDDARDPAARTARLPSIALRAARSALQSGAPVLVQVPRR 360 Query: 379 GYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXX 438 GY+P GPL+L S A CRWCGR +P RC RCGSD Sbjct: 361 GYIPSLACGRCRAIARCRSCTGPLSLQGAGSPGAVCRWCGRVDPTRRCVRCGSDVVRAVV 420 Query: 439 XXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXX 498 EELGRAFPGT VITS GDT+V + ALVV+TPGAEP Sbjct: 421 VGARRTAEELGRAFPGTAVITSAGDTLVPQLDAGPALVVATPGAEPRAPGGYGAALLLDS 480 Query: 499 XXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADA 558 RQDLRAAED L RWM AAALVRPR GGVV VVAES +PTVQ+LIRWDPVGHA+A Sbjct: 481 WALLGRQDLRAAEDALWRWMTAAALVRPRGAGGVVTVVAESSIPTVQSLIRWDPVGHAEA 540 Query: 559 ELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPE----GAERLGPVDLPFGARRPPG 614 EL +R EVGLPP+VH+AA+DG VTALL+ A LP+ A+ LGPVDLP G RRP G Sbjct: 541 ELAARTEVGLPPSVHIAALDGPAGTVTALLEAARLPDPDRLQADLLGPVDLPPGVRRPAG 600 Query: 615 LDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPS---RVQIDPLHIG 666 + ADA V RML+RV ++ RVQIDPLHIG Sbjct: 601 IPADAPVIRMLLRVCREQGLELAASLRRGIGVLSARQTRQTRSLVRVQIDPLHIG 655 >sp|Q9CCQ3|PRIA_MYCLE Tax_Id=1769 (priA)RecName: Full=Putative primosomal protein N'; EC=3.6.4.-; AltName: Full=ATP-dependent helicase priA; AltName: Full=Replication factor Y;[Mycobacterium leprae] Length = 651 Score = 756 bits (1951), Expect = 0.0 Identities = 400/651 (61%), Positives = 455/651 (69%), Gaps = 3/651 (0%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVD F+LERR+DT+H G+LGWLD+ Sbjct: 1 MLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFVLERRNDTEHFGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEP-EPIPAID-- 135 VVS +PVLT +VRRLVDAV ARYAGTRPDVLRLA+P RHA VE++T A P P+P I Sbjct: 61 VVSAQPVLTAEVRRLVDAVVARYAGTRPDVLRLAVPTRHARVERETLAIPVSPLPLIPGP 120 Query: 136 VDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMP 195 VD SGW Y RG QFLTAL E RAARAVWQALPGEQW R AEAAA + AG+ LAI+P Sbjct: 121 VDPSGWEVYGRGGQFLTALAESRAARAVWQALPGEQWADRFAEAAAQAIRAGRAALAIVP 180 Query: 196 DQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVA 255 DQRD+D L AVT V E VVALSAGLG + RY+RWL LRG AR+VIGTRSAVFAPV Sbjct: 181 DQRDLDVLWRAVTTRVDERSVVALSAGLGQAVRYQRWLKVLRGSARLVIGTRSAVFAPVN 240 Query: 256 DLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWA 315 DLGL++VW D DD LAEPRAPYPHAREVAMLRA+Q RCAA+IGGY RTAEAHALVR+ WA Sbjct: 241 DLGLVMVWSDADDMLAEPRAPYPHAREVAMLRAYQARCAALIGGYTRTAEAHALVRSGWA 300 Query: 316 HDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQV 375 HD+ L++S Y +E DPAA +ARLPS+AL+AAR+AL A PVL+QV Sbjct: 301 HDVVAARSVVRARAPRVVALDDSGYAEESDPAARTARLPSIALRAARSALAAGAPVLVQV 360 Query: 376 PRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXX 435 PRRGYVP GPL+L DR + C WCGRA+ LRCARCGS+ Sbjct: 361 PRRGYVPSLACGRCRTLARCRHCTGPLSLLDRATPGTVCCWCGRADLTLRCARCGSEVVR 420 Query: 436 XXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXX 495 EELGRAF G PVITS GDT+V +V ALVV+TPGAEP Sbjct: 421 AVVVGARRTAEELGRAFAGMPVITSVGDTIVPEVGARPALVVATPGAEPRAPGGYGAALL 480 Query: 496 XXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGH 555 RQDLRAAE+ L RWM AAALVR R DGGVV VVAE+ +PTVQ+L+RWDP H Sbjct: 481 LDTWALLGRQDLRAAEEALWRWMTAAALVRARGDGGVVMVVAEASIPTVQSLMRWDPASH 540 Query: 556 ADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGL 615 A+AEL +R EVGLPP+VH+AAVDGT AV LL A LP+ A+ LGPVDLP G RRP G Sbjct: 541 AEAELAARTEVGLPPSVHIAAVDGTTGAVNELLQEARLPDEADLLGPVDLPQGVRRPAGT 600 Query: 616 DADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 A +SR+LVRVP + RVQIDPLHIG Sbjct: 601 PLGAPISRLLVRVPREQGWQLAASLRRGIGVLSVRQTHQLVRVQIDPLHIG 651 >tr|B8ZUM3|B8ZUM3_MYCLB Tax_Id=561304 (priA)SubName: Full=Putative primosomal protein N';[Mycobacterium leprae] Length = 651 Score = 756 bits (1951), Expect = 0.0 Identities = 400/651 (61%), Positives = 455/651 (69%), Gaps = 3/651 (0%) Query: 19 MLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDK 78 MLSVPHLDREFDYLVS E SD+AQPGVR +VRFHGRLVD F+LERR+DT+H G+LGWLD+ Sbjct: 1 MLSVPHLDREFDYLVSAEQSDDAQPGVRVRVRFHGRLVDGFVLERRNDTEHFGKLGWLDR 60 Query: 79 VVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEP-EPIPAID-- 135 VVS +PVLT +VRRLVDAV ARYAGTRPDVLRLA+P RHA VE++T A P P+P I Sbjct: 61 VVSAQPVLTAEVRRLVDAVVARYAGTRPDVLRLAVPTRHARVERETLAIPVSPLPLIPGP 120 Query: 136 VDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMP 195 VD SGW Y RG QFLTAL E RAARAVWQALPGEQW R AEAAA + AG+ LAI+P Sbjct: 121 VDPSGWEVYGRGGQFLTALAESRAARAVWQALPGEQWADRFAEAAAQAIRAGRAALAIVP 180 Query: 196 DQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVA 255 DQRD+D L AVT V E VVALSAGLG + RY+RWL LRG AR+VIGTRSAVFAPV Sbjct: 181 DQRDLDVLWRAVTTRVDERSVVALSAGLGQAVRYQRWLKVLRGSARLVIGTRSAVFAPVN 240 Query: 256 DLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWA 315 DLGL++VW D DD LAEPRAPYPHAREVAMLRA+Q RCAA+IGGY RTAEAHALVR+ WA Sbjct: 241 DLGLVMVWSDADDMLAEPRAPYPHAREVAMLRAYQARCAALIGGYTRTAEAHALVRSGWA 300 Query: 316 HDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQV 375 HD+ L++S Y +E DPAA +ARLPS+AL+AAR+AL A PVL+QV Sbjct: 301 HDVVAARSVVRARAPRVVALDDSGYAEESDPAARTARLPSIALRAARSALAAGAPVLVQV 360 Query: 376 PRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXX 435 PRRGYVP GPL+L DR + C WCGRA+ LRCARCGS+ Sbjct: 361 PRRGYVPSLACGRCRTLARCRHCTGPLSLLDRATPGTVCCWCGRADLTLRCARCGSEVVR 420 Query: 436 XXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXX 495 EELGRAF G PVITS GDT+V +V ALVV+TPGAEP Sbjct: 421 AVVVGARRTAEELGRAFAGMPVITSVGDTIVPEVGARPALVVATPGAEPRAPGGYGAALL 480 Query: 496 XXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGH 555 RQDLRAAE+ L RWM AAALVR R DGGVV VVAE+ +PTVQ+L+RWDP H Sbjct: 481 LDTWALLGRQDLRAAEEALWRWMTAAALVRARGDGGVVMVVAEASIPTVQSLMRWDPASH 540 Query: 556 ADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGL 615 A+AEL +R EVGLPP+VH+AAVDGT AV LL A LP+ A+ LGPVDLP G RRP G Sbjct: 541 AEAELAARTEVGLPPSVHIAAVDGTTGAVNELLQEARLPDEADLLGPVDLPQGVRRPAGT 600 Query: 616 DADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 A +SR+LVRVP + RVQIDPLHIG Sbjct: 601 PLGAPISRLLVRVPREQGWQLAASLRRGIGVLSVRQTHQLVRVQIDPLHIG 651 >tr|Q0S0L3|Q0S0L3_RHOSR Tax_Id=101510 SubName: Full=Probable primosomal protein N;[Rhodococcus sp.] Length = 672 Score = 673 bits (1736), Expect = 0.0 Identities = 353/672 (52%), Positives = 433/672 (64%), Gaps = 6/672 (0%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 M+ + AAE +P+ARVLP+L + HLDREFDYLV ++L + A+PGVR ++RF GRLVD F+ Sbjct: 1 MSAEKVAAEVDPVARVLPLLPLAHLDREFDYLVPQDLDEQARPGVRVRIRFAGRLVDGFV 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 + R + +DH+GR GWL++V+SPE VLT ++ R+VD VA RYAGTR DVLRLAIPPRHA Sbjct: 61 VSRNATSDHQGRFGWLERVISPERVLTEEITRVVDLVAGRYAGTRADVLRLAIPPRHARA 120 Query: 121 EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA 180 E + +EP +P +++ W RY G FLTAL RA RAVWQALPGE WP RLAE + Sbjct: 121 ESEAASEPPEVPDSAIETEAWDRYVHGGAFLTALSGERAPRAVWQALPGEDWPARLAELS 180 Query: 181 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA 240 G + ++PDQRD+D + AAV + + VV L+AGLGP+ RYRRWLAALRG A Sbjct: 181 GLVAATGASTVVVVPDQRDLDRVVAAVEKLLGKDAVVGLAAGLGPALRYRRWLAALRGTA 240 Query: 241 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY 300 +VV+GTRS+VFAP GLI+VWDDGDDN +EPRAPYPHAREVA+LRA+ CA V+ G+ Sbjct: 241 KVVVGTRSSVFAPTPRTGLIVVWDDGDDNHSEPRAPYPHAREVALLRAYASGCAVVLAGH 300 Query: 301 ARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQA 360 ARTAEA ALV + WAHDL L +S + RDP A +ARLP++A A Sbjct: 301 ARTAEAQALVDSGWAHDLVASRDSVRAAAPKITALADSDHALARDPGARAARLPAIAFAA 360 Query: 361 ARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDR----DSAAAQCRW 416 AR AL A R VL+QVPRRGYVP GPLALP + CRW Sbjct: 361 AREALGAGRGVLVQVPRRGYVPSLACGKCRAPARCRRCNGPLALPSAAGPDGAGTPACRW 420 Query: 417 CGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALV 476 CG A+ A RC CG+ EELGRAFPG PV SGG VV +V+ LV Sbjct: 421 CGVADAAHRCHACGAKALRAVVVGAGRTAEELGRAFPGVPVRMSGGTDVVDEVKQGPTLV 480 Query: 477 VSTPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVV 536 VST GAEP R DLRAAE+TLRRWM A++LVRP A+GG V VV Sbjct: 481 VSTVGAEPVMPGGYGAALLLDGWALLGRPDLRAAEETLRRWMTASSLVRPFAEGGQVVVV 540 Query: 537 AESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEG 596 A+S +PTVQAL+RWDPVGHA A+ + R EVG PPA+H+AA+DG+ KA+ LLD A LP Sbjct: 541 ADSGIPTVQALVRWDPVGHARAQYEERAEVGFPPAIHLAAIDGSAKAIADLLDLADLPAN 600 Query: 597 AERLGPVDLPFGARRPPGLDA--DAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQE 654 AE LGPV+LP G R P DA A+V RML+RVP D + Sbjct: 601 AELLGPVELPAGERLPFSGDAPEPADVERMLIRVPRGEGKPLAKALGEAQSVRSARKDSQ 660 Query: 655 PSRVQIDPLHIG 666 P+RVQIDP+ IG Sbjct: 661 PARVQIDPIRIG 672 >tr|C1B4J8|C1B4J8_RHOOB Tax_Id=632772 (priA)SubName: Full=Primosomal protein n'; EC=3.6.1.-;[Rhodococcus opacus] Length = 657 Score = 659 bits (1701), Expect = 0.0 Identities = 347/657 (52%), Positives = 422/657 (64%), Gaps = 6/657 (0%) Query: 16 VLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGW 75 +LP+L + HLDREFDYLV ++L +AQPGVR ++RF GRLVD F++ R + +DH+GR GW Sbjct: 1 MLPLLPLAHLDREFDYLVPKDLDVHAQPGVRVRIRFAGRLVDGFVVARTATSDHQGRFGW 60 Query: 76 LDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAID 135 L++V+SPE VLT ++ R+VD VA RYAGTR DVLRLAIPPRHA E + +EP + Sbjct: 61 LERVISPERVLTEEITRVVDLVAGRYAGTRADVLRLAIPPRHARAESEAASEPPEVSGTA 120 Query: 136 VDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMP 195 + + GW RY G FLTAL EGRA RAVWQALPGE WP RLAE + G + ++P Sbjct: 121 IATDGWDRYVHGAAFLTALAEGRAPRAVWQALPGENWPGRLAELSGLVAATGASTVVVVP 180 Query: 196 DQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVA 255 DQRD+D + AAV + + VV L+AGLGP+ RYRRWLAALRG ARVV+GTRS+VFAP Sbjct: 181 DQRDLDRVVAAVGTLLGKDAVVGLAAGLGPALRYRRWLAALRGTARVVVGTRSSVFAPTP 240 Query: 256 DLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWA 315 GLI+VWDDGDDN +EPRAPYPHAREVA+LRA+ CA V+ G+ARTAEA ALV + WA Sbjct: 241 RTGLIVVWDDGDDNHSEPRAPYPHAREVALLRAYASGCAVVLAGHARTAEAQALVDSGWA 300 Query: 316 HDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQV 375 HDL L +S + RDP A +ARLP++A AAR AL A R VL+QV Sbjct: 301 HDLVASRDSVRAAAPKITALADSDHALARDPGARAARLPAIAFAAAREALGAGRGVLVQV 360 Query: 376 PRRGYVPXXXXXXXXXXXXXXXXXGPLALPDR----DSAAAQCRWCGRAEPALRCARCGS 431 PRRGYVP GPLALP + CRWCG A+ A RC CG+ Sbjct: 361 PRRGYVPSLACGKCRAPARCRRCNGPLALPSAAGPDGAGTPACRWCGVADAAHRCHACGA 420 Query: 432 DXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXX 491 EELGRAFPG V SGG VV +V+ LVVST GAEP Sbjct: 421 RALRAVVVGAGRTAEELGRAFPGVAVRMSGGSDVVDEVKQGPTLVVSTVGAEPVMPGGYG 480 Query: 492 XXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWD 551 R DLRAAE+T+RRWM A++LVRP ADGG V VVA+S +PTVQAL+RWD Sbjct: 481 AALLLDGWALLGRPDLRAAEETMRRWMTASSLVRPFADGGQVVVVADSGIPTVQALVRWD 540 Query: 552 PVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARR 611 PVGHA A+ + R EVG PPA+H+AA+DG+ KA+ LL+ A LP AE LGPV+LP G R Sbjct: 541 PVGHARAQYEERAEVGFPPAIHLAAIDGSAKAIADLLELADLPANAELLGPVELPAGERL 600 Query: 612 PPGLDA--DAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 P DA A+V RML+RVP D +P+RVQIDP+ IG Sbjct: 601 PFSGDAPEPADVERMLIRVPRGEGKPLAKALGEAQSVRSARKDSQPARVQIDPIRIG 657 >tr|C3JSU6|C3JSU6_RHOER Tax_Id=596309 (priA)SubName: Full=Primosomal protein N;[Rhodococcus erythropolis SK121] Length = 672 Score = 644 bits (1660), Expect = 0.0 Identities = 345/672 (51%), Positives = 422/672 (62%), Gaps = 6/672 (0%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 M R AAE +P+ARVLPML + HLDREFDYLV EL +AQPGVR ++RF GRLVD FI Sbjct: 1 MGAERVAAEVDPVARVLPMLPLAHLDREFDYLVPRELEADAQPGVRVRIRFAGRLVDGFI 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 + R + +DH+G+ GWL++V+S E VLT ++ ++VD VA RYAGTR DVLRLA+PPRHA V Sbjct: 61 VSREATSDHQGKFGWLERVISSERVLTAEIAQVVDRVAERYAGTRADVLRLAVPPRHAKV 120 Query: 121 EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA 180 E + EP A + +GW Y G+ FL+A+ E ++ RAVWQALPGE WP RLAE A Sbjct: 121 EAEPWEPAEPPSAPEPIENGWHLYRFGDAFLSAIRESKSPRAVWQALPGENWPLRLAELA 180 Query: 181 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA 240 A +G+ + ++PDQRD+D + AA T VV LSAGLGP+ RYRRWLAALRG A Sbjct: 181 GAVAASGKSAILVVPDQRDLDRVVAACTELSGADAVVGLSAGLGPAMRYRRWLAALRGTA 240 Query: 241 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY 300 R+V+GTRSAVFAP + GL++VWDDGDDNL+EPR+PYPHAREVA+LR + CA VIGG+ Sbjct: 241 RIVVGTRSAVFAPTPETGLVVVWDDGDDNLSEPRSPYPHAREVAVLRGYVAGCAVVIGGF 300 Query: 301 ARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQA 360 +RTAEA LV + WAHDL L +S RDP A +ARLP++A A Sbjct: 301 SRTAEAQVLVDSGWAHDLVATRDVVRAHAPKITALADSDQALARDPGARAARLPAIAFAA 360 Query: 361 ARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALP----DRDSAAAQCRW 416 AR AL VL+QVPRRGYVP GPLALP + CRW Sbjct: 361 ARRALGEGNGVLVQVPRRGYVPTLACGKCRAPARCRRCNGPLALPAAAGPDGAGTPACRW 420 Query: 417 CGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALV 476 CG A+ A RC CG+ EELGRAFPG V+ SGG VV ++ ALV Sbjct: 421 CGVADAAYRCHACGAKALRAVVVGAGRTAEELGRAFPGVKVVLSGGSDVVKELPHGPALV 480 Query: 477 VSTPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVV 536 VST GAEP R DLRAAEDTLRRWM+AAA+V P ++GG V VV Sbjct: 481 VSTVGAEPVMTGGYGAALLLDGWALLGRPDLRAAEDTLRRWMSAAAMVIPLSEGGEVVVV 540 Query: 537 AESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEG 596 A+S +PTVQAL+RWDPVGHA ++ + R EVG PPAVHMAA+DG A+ L+D A LP Sbjct: 541 ADSGIPTVQALVRWDPVGHAQSQFEERDEVGFPPAVHMAAIDGGSAAIAELVDSADLPAS 600 Query: 597 AERLGPVDLPFGARRPPGLDADAEVS--RMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQE 654 A LGPV+LP G R P + ++ V+ RMLVRVP Sbjct: 601 AVLLGPVELPAGERLPYSGEDESGVAPERMLVRVPRKDGRGLADALAHARAARSARKSSG 660 Query: 655 PSRVQIDPLHIG 666 P R+QIDP IG Sbjct: 661 PVRIQIDPRRIG 672 >tr|C0ZZD5|C0ZZD5_RHOE4 Tax_Id=234621 (priA)SubName: Full=Putative primosomal protein n'; EC=3.6.1.-;[Rhodococcus erythropolis] Length = 672 Score = 640 bits (1652), Expect = 0.0 Identities = 343/672 (51%), Positives = 422/672 (62%), Gaps = 6/672 (0%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 M R AAE +P+ARVLPML + HLDREFDYLV EL +AQPGVR ++RF GRLVD FI Sbjct: 1 MGAERVAAEVDPVARVLPMLPLAHLDREFDYLVPRELEADAQPGVRVRIRFAGRLVDGFI 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 + R + +DH+G+ GWL++V+S E VLT ++ ++VD VA RYAGTR DVLRLA+PPRHA V Sbjct: 61 VSREATSDHQGKFGWLERVISSERVLTAEIAQVVDRVAERYAGTRADVLRLAVPPRHAKV 120 Query: 121 EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA 180 E + EP A + +GW Y G+ FL+A+ E ++ RAVWQALPGE WP RLAE A Sbjct: 121 EAEPWEPAEPPSAPEPIENGWHLYRFGDAFLSAIRESKSPRAVWQALPGENWPLRLAELA 180 Query: 181 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA 240 A +G+ + ++PDQRD+D + AA T VV LSAGLGP+ RYRRWLAALRG A Sbjct: 181 GAVAASGKSAILVVPDQRDLDRVVAACTELSGADAVVGLSAGLGPAMRYRRWLAALRGTA 240 Query: 241 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY 300 R+V+GTRSAVFAP + GL++VWDDGDDNL+EPR+PYPHAREVA+LR + CA VIGG+ Sbjct: 241 RIVVGTRSAVFAPTPETGLVVVWDDGDDNLSEPRSPYPHAREVAVLRGYVAGCAVVIGGF 300 Query: 301 ARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQA 360 +RTAE+ LV + WAHDL L +S RDP A +ARLP++A A Sbjct: 301 SRTAESQVLVDSGWAHDLVATRDVVRAHAPKITALADSDQALARDPGARAARLPAIAFAA 360 Query: 361 ARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALP----DRDSAAAQCRW 416 AR AL VL+QVPRRGYVP GPLALP + CRW Sbjct: 361 ARRALGEGNGVLVQVPRRGYVPTLACGKCRAPARCRRCNGPLALPAAAGPDGAGTPACRW 420 Query: 417 CGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALV 476 CG A+ A RC CG+ EELGRAFPG V+ SGG VV ++ ALV Sbjct: 421 CGVADAAYRCHACGAKALRAVVVGAGRTAEELGRAFPGVKVVLSGGGDVVKELPHGPALV 480 Query: 477 VSTPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVV 536 VST GAEP R DLRAAE+TLRRWM+AAA+V P ++GG V VV Sbjct: 481 VSTVGAEPVMTGGYGAALLLDGWALLGRPDLRAAEETLRRWMSAAAMVIPLSEGGEVVVV 540 Query: 537 AESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEG 596 A+S +PTVQAL+RWDPVGHA ++ + R EVG PPAVHMAA+DG A+ L+D A LP Sbjct: 541 ADSGIPTVQALVRWDPVGHAQSQFEERDEVGFPPAVHMAAIDGGSAAIAELVDSADLPAS 600 Query: 597 AERLGPVDLPFGARRPPGLDADAEVS--RMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQE 654 A LGPV+LP G R P + ++ V+ RMLVRVP Sbjct: 601 AVLLGPVELPAGERLPYSGEDESGVAPERMLVRVPRKDGRGLADALAHAYAARSARKSSG 660 Query: 655 PSRVQIDPLHIG 666 P R+QIDP IG Sbjct: 661 PVRIQIDPRRIG 672 >tr|D5PM21|D5PM21_COREQ Tax_Id=525370 (priA)SubName: Full=DNA replication factor Y; EC=3.6.1.-;[Rhodococcus equi ATCC 33707] Length = 657 Score = 639 bits (1647), Expect = 0.0 Identities = 349/660 (52%), Positives = 412/660 (62%), Gaps = 12/660 (1%) Query: 16 VLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGW 75 +LP+L V HLDREFDYL+ EL D AQPGVR +VRF GRLVD ++LER ++H G+LGW Sbjct: 1 MLPLLPVAHLDREFDYLIPAELDDQAQPGVRVRVRFSGRLVDGYLLERIESSEHPGKLGW 60 Query: 76 LDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQ--TPAE-PEPIP 132 LD+VVS EPVLT +VR LVDAVA RYAGTR DVLRLA+PPRHA VE + TP PEP Sbjct: 61 LDRVVSAEPVLTAEVRDLVDAVAQRYAGTRTDVLRLAVPPRHAKVESEEWTPRPAPEPPK 120 Query: 133 AIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLA 192 A D W+ Y G FL AL GR RA WQALPGE W RLAE A G+GV+ Sbjct: 121 A---DREAWSAYTHGINFLEALEAGRGPRAAWQALPGEDWTTRLAELAGVVAATGRGVIL 177 Query: 193 IMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFA 252 ++PDQRD+D L AA + V VV L+AGLGP+ARYRRWLAALRG AR+V+GTR++VFA Sbjct: 178 VVPDQRDLDRLLAACESVVGADHVVGLAAGLGPAARYRRWLAALRGTARIVVGTRASVFA 237 Query: 253 PVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRT 312 P D+GL++VWDDGD +L+EPR+PYPHAREVA+LRAH CA VI G+ARTAEA ALV + Sbjct: 238 PTPDIGLVVVWDDGDSSLSEPRSPYPHAREVALLRAHSTGCAVVIAGHARTAEAQALVDS 297 Query: 313 RWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVL 372 WAHDL L +S + RDP A +ARLP +A AAR AL A VL Sbjct: 298 GWAHDLVAARDVVRARAPMITALADSDHALARDPGARAARLPGIAFTAARQALAAGHGVL 357 Query: 373 IQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALP----DRDSAAAQCRWCGRAEPALRCAR 428 +QVPRRGYVP GPLALP + + C+WCG A+ RC Sbjct: 358 VQVPRRGYVPSLACAKCRAPARCRRCNGPLALPAAAGPDGAGSPTCKWCGVADTNHRCHA 417 Query: 429 CGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXX 488 CG+ EELGRAF G V TSGG V +++ LVVST GAEP Sbjct: 418 CGARALRAVVVGAGRTAEELGRAFAGIAVHTSGGSDVKAEISPGPKLVVSTVGAEPVMPG 477 Query: 489 XXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALI 548 R DLRAAE+TLRRWM A+ALVRP DGG V VVA+S +PTVQAL+ Sbjct: 478 GYGAALLLDGWALLGRADLRAAEETLRRWMTASALVRPHGDGGQVVVVADSGIPTVQALV 537 Query: 549 RWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFG 608 RWDPV HA +L+ R EVG PPAVH+AA+DGT ++ +L+ A LPE AE LGPV LP G Sbjct: 538 RWDPVWHARGQLEERAEVGFPPAVHLAAIDGTVASIGEILELAALPESAEVLGPVPLPPG 597 Query: 609 ARRPPGLD--ADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 R P D +V RMLVRVP P RVQ+DPL IG Sbjct: 598 ERLPFSSDEPEPEDVERMLVRVPRADGRALAKALAEARAVRSARRSVGPVRVQVDPLRIG 657 >tr|D0LCS0|D0LCS0_GORB4 Tax_Id=526226 SubName: Full=Primosomal protein N' (Replication factor Y)-superfamily II helicase-like protein;[Gordonia bronchialis] Length = 648 Score = 616 bits (1589), Expect = e-174 Identities = 330/654 (50%), Positives = 399/654 (61%), Gaps = 9/654 (1%) Query: 16 VLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGW 75 +LP+L + HLDR FDYLV E A PGVR +VRF GRLVD +L+R +++H G+LGW Sbjct: 1 MLPLLGLTHLDRPFDYLVDTEQDATALPGVRVRVRFAGRLVDGILLDRIDESEHPGKLGW 60 Query: 76 LDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAID 135 LD+VVS EPVL ++ L AVA RYAGT DV+RLA+PPRHA EK+ P + + Sbjct: 61 LDRVVSAEPVLGPELAALCRAVADRYAGTMGDVIRLAVPPRHARTEKEETPAPTSV-VVA 119 Query: 136 VDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMP 195 D +GW Y + FL +L RA WQA+PGE WP+RLAE AA V AG+G + ++P Sbjct: 120 PDRAGWRTYRSADGFLDSLSAAHP-RAAWQAVPGEDWPRRLAELAATVVAAGRGAIIVVP 178 Query: 196 DQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVA 255 DQRD+D + AA + + R V LSAGLGP+ARYRRWLA RG A VV+GTRSA+FAPVA Sbjct: 179 DQRDLDRVSAACEPLLGD-RCVTLSAGLGPTARYRRWLAVRRGAATVVLGTRSAIFAPVA 237 Query: 256 DLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWA 315 +LGL++VWDDGDD+LAEPRAPYPH REV +LRAHQ +CA VIGG+ARTAEA ALV WA Sbjct: 238 ELGLVVVWDDGDDSLAEPRAPYPHPREVGVLRAHQEQCALVIGGFARTAEAQALVAAGWA 297 Query: 316 HDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQV 375 HDL + + Q RDP A SAR+P++A AAR AL AD PV+ V Sbjct: 298 HDLVADRQVVRTRSPHVQAITDDDAQVARDPQARSARIPAVAFDAARAALAADTPVIFSV 357 Query: 376 PRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXX 435 PRRGY+P GPL L D + CRWCGRAEP+ RC CG Sbjct: 358 PRRGYIPSLACTRCREHVRCRACHGPLQL---DGSHLSCRWCGRAEPSFRCPACGGTAVR 414 Query: 436 XXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXX 495 EELGRAF G PV+TSGG T++ D+ +VV+TPGAEP Sbjct: 415 ALVTGARRTAEELGRAFAGVPVVTSGGSTIIDDIPAGARVVVATPGAEPVAPDGYGAAVI 474 Query: 496 XXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGH 555 R DLRA E +RRWMA VRP DGG + +VA+S LP VQALIRWDPVG Sbjct: 475 LDTWAQLDRADLRAGEYAVRRWMAIGGQVRPHGDGGRLVIVADSSLPPVQALIRWDPVGF 534 Query: 556 ADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGL 615 A+ EL R E+G PPAV MA+VDG + +T +H LP + LGPV LP G R P G Sbjct: 535 AETELAERAELGFPPAVTMASVDGDRQLITEFAEHLDLPPEGDVLGPVPLPPGVRPPAGS 594 Query: 616 ---DADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 D DAEV R+LVRVP H+ P RVQIDP IG Sbjct: 595 DREDLDAEVDRLLVRVPRRDGRLLADALVTAQARRNTRHETGPIRVQIDPPTIG 648 >tr|D5PHV5|D5PHV5_9MYCO Tax_Id=525368 (priA)SubName: Full=DNA replication factor Y; EC=3.6.1.-;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 538 Score = 604 bits (1557), Expect = e-170 Identities = 319/534 (59%), Positives = 363/534 (67%), Gaps = 3/534 (0%) Query: 136 VDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMP 195 VD + W Y RG QFL AL E RAARAVWQALPGE W R AEAAA T+ AG+ VLAI+P Sbjct: 5 VDPAAWEVYGRGAQFLDALAESRAARAVWQALPGESWADRFAEAAAQTIRAGRSVLAIVP 64 Query: 196 DQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVA 255 DQRD+DAL A TA + E VVALSAGLGP+ARYRRWLAALRG AR+VIGTRSAVFAP++ Sbjct: 65 DQRDLDALARAATARIDEGGVVALSAGLGPAARYRRWLAALRGQARLVIGTRSAVFAPLS 124 Query: 256 DLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWA 315 DLGL++VW D DD+LAEPRAPYPHAREVAMLRAHQ RCAA+IGGYARTAEA ALVR+ WA Sbjct: 125 DLGLVMVWADADDSLAEPRAPYPHAREVAMLRAHQARCAALIGGYARTAEAQALVRSGWA 184 Query: 316 HDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQV 375 HD+ L+++ Y ERDPAA +AR+PS+AL+AAR++L A PVL+QV Sbjct: 185 HDIVATRAVVRARTPRVIALDDTGYADERDPAARTARIPSIALRAARSSLQAAAPVLVQV 244 Query: 376 PRRGYVPXXXXXXXXXXXXXXXXXGPLAL---PDRDSAAAQCRWCGRAEPALRCARCGSD 432 PRRGYVP GPL+L P R A CRWCGR +P RCARCGSD Sbjct: 245 PRRGYVPSLACARCRTIARCRHCTGPLSLTESPQRGGPALVCRWCGRIDPTRRCARCGSD 304 Query: 433 XXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXX 492 EELGRAFPGT V+TS GD VV +V ALVV+TPGAEP Sbjct: 305 AVRAVVVGARRTAEELGRAFPGTAVVTSSGDGVVPEVAAGPALVVATPGAEPVAAGGYGA 364 Query: 493 XXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDP 552 RQDLRAAED L RWM+AAALVR R DGGVV VAES +PTVQ+LIRWDP Sbjct: 365 ALLLDTWALLGRQDLRAAEDALWRWMSAAALVRARGDGGVVLAVAESSIPTVQSLIRWDP 424 Query: 553 VGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRP 612 VGHA+A+L +R EVGLPP+VHMAA+DG +AV ALL+ A LP+GA+ LGPVDLP G RRP Sbjct: 425 VGHAEADLAARTEVGLPPSVHMAALDGAAEAVAALLEEAGLPDGADVLGPVDLPAGVRRP 484 Query: 613 PGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 G A V+RMLVR EP RVQIDPLHIG Sbjct: 485 AGTPAGTPVTRMLVRARREQGLALAAALRRGVSVLSARQAHEPVRVQIDPLHIG 538 >tr|Q5YTN1|Q5YTN1_NOCFA Tax_Id=37329 (priA)SubName: Full=Putative primosomal protein;[Nocardia farcinica] Length = 693 Score = 597 bits (1538), Expect = e-168 Identities = 340/697 (48%), Positives = 407/697 (58%), Gaps = 50/697 (7%) Query: 16 VLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGW 75 +LP+L+ HLDR+FDYLV E+ + A+PGVR +VRF GRLVD ++L+R +DH+G L Sbjct: 1 MLPLLTPAHLDRDFDYLVPAEMDELARPGVRVRVRFAGRLVDGYLLDRLERSDHDGTLIP 60 Query: 76 LDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEK-----------QT 124 L++VVS E VLT ++ RLV AVA+RYAGTR DVLRLAIPPRHA E Sbjct: 61 LERVVSGERVLTPEILRLVTAVASRYAGTRADVLRLAIPPRHARAENGGAKKAAGQGDSA 120 Query: 125 PAEPE----PIPAID----------------------------VDSSGWARYARGEQFLT 152 PE +P ID VD++GWARY G+ F+ Sbjct: 121 AGGPEAAAADVPPIDADGAEAEVSGSSVATSVGPEADSAERPPVDTAGWARYLHGDSFVA 180 Query: 153 ALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVP 212 AL GR RA WQALPGE W +RLAE AA V +G+GV+ ++PDQRD+D + A A V Sbjct: 181 ALAAGRGVRAAWQALPGEDWARRLAELAAVVVRSGRGVILMVPDQRDLDRVLAECVALVG 240 Query: 213 ESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLGLILVWDDGDDNLAE 272 ++ V LSAGLGP+ARYRRWLA LRG ARVV+GTR+AVFAPVADLGL+ +WDDGDD AE Sbjct: 241 DT-AVGLSAGLGPAARYRRWLAVLRGQARVVVGTRAAVFAPVADLGLVAIWDDGDDTYAE 299 Query: 273 PRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXX 332 PRAPYPHAREV+MLRAH+ A V G+ARTAE A+V + WAHDL Sbjct: 300 PRAPYPHAREVSMLRAHETGAAFVAAGFARTAEVQAVVDSGWAHDLVAERPVVRTAAPRI 359 Query: 333 XXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRRGYVPXXXXXXXXXX 392 +S ERDP A + R+P++A AAR AL VL+QVPRRGYVP Sbjct: 360 SAPGDSDIALERDPVARAVRIPAVAFAAARAALKEGAAVLVQVPRRGYVPALACSKCRTP 419 Query: 393 XXXXXXXGPLALPDRDSAAAQ---CRWCGRAEPALRCARCGSDXXXXXXXXXXXXXEELG 449 GPLALPD AA CRWCG AE A RC C S EELG Sbjct: 420 ARCRRCNGPLALPDAPDGAAHSPACRWCGVAETAFRCPVCASRALRAVVIGATRTAEELG 479 Query: 450 RAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXXXXXXXRQDLRA 509 RAFPG P+ S ++ V +VV+T GAEP R DLRA Sbjct: 480 RAFPGVPIRGSSAGAMLDSVEPGPQVVVATVGAEPVVRGGYGVALLLDGWALLGRADLRA 539 Query: 510 AEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADAELDSRGEVGLP 569 ED LRRW+ AAALVR G V V+AE LPTVQAL+RWDPVGHA AE+ R EVG P Sbjct: 540 GEDALRRWLNAAALVRSH---GQVVVMAEPALPTVQALVRWDPVGHARAEVAERSEVGFP 596 Query: 570 PAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGLDADAEVSRMLVRVP 629 PAV +AAVDG +A+ LL A LP+G E LGPV LP GAR+P D+ AEV R+L+RV Sbjct: 597 PAVRLAAVDGAAEAIRDLLAAATLPDGVEVLGPVPLPEGARKPFAGDSPAEVERVLLRVD 656 Query: 630 XXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 P RVQIDP+ IG Sbjct: 657 RRAGAALARALTAAQAVRSTHRSDAPLRVQIDPVDIG 693 >tr|D5URX2|D5URX2_TSUPA Tax_Id=521096 SubName: Full=Primosomal protein N';[Tsukamurella paurometabola DSM 20162] Length = 657 Score = 585 bits (1509), Expect = e-165 Identities = 327/660 (49%), Positives = 391/660 (59%), Gaps = 18/660 (2%) Query: 12 PIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEG 71 PIARVLP+L V HLDREFDYLV E +AQPGVR +VRF GRLVD ++LER +DH+G Sbjct: 11 PIARVLPLLQVSHLDREFDYLVPPEFDADAQPGVRVRVRFSGRLVDGYLLERLPRSDHDG 70 Query: 72 RLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEK-----QTPA 126 +L LD+VVSP PVLT V RLV VA RYAGTR DVLRLAIPPRHA VEK + PA Sbjct: 71 KLARLDRVVSPLPVLTPPVLRLVTEVATRYAGTRADVLRLAIPPRHARVEKDLLKAEPPA 130 Query: 127 EPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNA 186 PEP + + A Y GEQF+ A GRA AVWQALPGE W RLAE AAA + + Sbjct: 131 PPEPPEVV----AALAEYTHGEQFVAAALAGRAPHAVWQALPGEDWAARLAELAAAVIES 186 Query: 187 GQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGT 246 G+ L ++PDQ D+D L AA + + L+AGLGPSARYRRWL AL G +VIGT Sbjct: 187 GRSALLVVPDQADLDRLAAACA----DLKPTVLAAGLGPSARYRRWLTALLGRTSLVIGT 242 Query: 247 RSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEA 306 RSA F P+A+ GL+++WDDGD++ EPRAPYPH REV LRAHQ A VIGG+ART EA Sbjct: 243 RSAAFVPLANPGLLVLWDDGDESFVEPRAPYPHTREVLALRAHQEGAALVIGGFARTPEA 302 Query: 307 HALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALD 366 AL+ WA ++ + +S ++ RDP A SARLP+ A AAR ALD Sbjct: 303 QALLDAGWAAEVTAPRERVRERSPRIIGVADSDFELARDPLARSARLPAAAFAAARAALD 362 Query: 367 ADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRC 426 A+RPVL+QVPRRGY P GP L +CRWC R + RC Sbjct: 363 AERPVLVQVPRRGYAPAMSCERCRTPARCRRCHGP--LEQAAGGVLRCRWCDRPDAGYRC 420 Query: 427 ARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXX 486 CG EELGRAFPG V SGG+ V+++V G R LVV+TPGAEP Sbjct: 421 PACGGTTMRAVIVGASRTAEELGRAFPGAAVTMSGGEHVLAEVPGGRRLVVATPGAEPVV 480 Query: 487 XXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQA 546 R DLRA E+T+RRWM AAALV A G V A++ +P VQA Sbjct: 481 EHGYGAALLLDGWLLLGRADLRAGEETVRRWMNAAALV---AADGTVVCGADASIPAVQA 537 Query: 547 LIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLP 606 LIRWD G A +EL R VG PPA H+AA+DG V A+ + A LP GAE LGPV LP Sbjct: 538 LIRWDAAGFAASELAERAVVGFPPAAHLAALDGAESDVVAVAETAELPPGAEILGPVGLP 597 Query: 607 FGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 G R P D + R+L+RVP + P R+Q+DPL IG Sbjct: 598 PGVRVPGAPDEGSPPMRVLIRVPRRDGRALAQAVFRAQVGRSLRREGSPVRIQMDPLRIG 657 >tr|C7MSK4|C7MSK4_SACVD Tax_Id=471857 SubName: Full=Primosomal protein N' (Replication factor Y)-superfamily II helicase;[Saccharomonospora viridis] Length = 695 Score = 575 bits (1481), Expect = e-161 Identities = 320/660 (48%), Positives = 391/660 (59%), Gaps = 8/660 (1%) Query: 5 RRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERR 64 R+ AE +PIARV+ + + HLDR FDY V E +A PG R +VRF G+LVD +++ER Sbjct: 40 RQPAESDPIARVVVDVPLAHLDRTFDYQVPREYDADAVPGCRVRVRFAGKLVDGYLVERA 99 Query: 65 SDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQT 124 + TDH GRL +L++VVS E VL + + AVA RY GT DVLRLAIPPRHA VE + Sbjct: 100 ATTDHTGRLAYLERVVSRERVLPPTLLSMCRAVARRYGGTLADVLRLAIPPRHARVEAEP 159 Query: 125 PAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATV 184 P P PA + GW RY RG F++A+ EGRAA AVWQALPGE WP+RLAE A Sbjct: 160 PQAPAAPPA-EPPGDGWGRYPRGPAFVSAVREGRAAHAVWQALPGEDWPRRLAELATLVA 218 Query: 185 NAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVI 244 G+G + ++PD RD+ LHA VVALSAGLGP+ RYRRWLA LRG R+V+ Sbjct: 219 GQGRGAVLVVPDHRDMARLHAVCVELAGADAVVALSAGLGPAERYRRWLAVLRGTVRIVV 278 Query: 245 GTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTA 304 GTR+A+FAPVAD GL +VWDDGDD +P APYP R+V +LRAH ++ G++RTA Sbjct: 279 GTRAAMFAPVADPGLYVVWDDGDDLHVDPHAPYPQVRDVLILRAHADGAPLLVAGHSRTA 338 Query: 305 EAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTA 364 EA LV WAH++ + E + RD AA +ARLP++A +AAR + Sbjct: 339 EAQLLVEAGWAHEITPAREVLRARAPRVTPIGED-FDVARDEAARAARLPAVAFEAARAS 397 Query: 365 LDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDR-DSAAAQCRWCGRAEPA 423 L A PVL+QVPRRGYVP GPL LP +S +CRWCG + A Sbjct: 398 LAAGAPVLVQVPRRGYVPGLACAHCRTSARCRHCAGPLQLPGAGESGVPRCRWCGVTDAA 457 Query: 424 LRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAE 483 RC CGS EELGRAFPGT V TSGG V+ +V ALVV+TPGAE Sbjct: 458 YRCPACGSGRLRAVVVGAARTAEELGRAFPGTTVRTSGGGDVLVEVPARPALVVATPGAE 517 Query: 484 PXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPT 543 P RQDLRAAE+TLRRWMAAA LVR +GG V V AE+ +PT Sbjct: 518 PVAEGGYGAALLLDGWALLGRQDLRAAEETLRRWMAAATLVRSAREGGRVVVGAEAGIPT 577 Query: 544 VQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPV 603 VQAL+RWDP HA EL R E+G PP V MA+V+G+P+AV LLD LPE E LGPV Sbjct: 578 VQALVRWDPGWHAGLELAERAELGFPPHVRMASVEGSPEAVATLLDEIDLPESGEVLGPV 637 Query: 604 DLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPL 663 P G G AE R L+RVP +P R+Q+DPL Sbjct: 638 --PLGEVDEEG---RAERERALLRVPREDGRALAESVHAVRAVRDARKATDPVRIQLDPL 692 >tr|C6W8Y3|C6W8Y3_ACTMD Tax_Id=446462 SubName: Full=Primosomal protein N' (Replication factor Y)-superfamily II helicase-like protein;[Actinosynnema mirum] Length = 665 Score = 573 bits (1478), Expect = e-161 Identities = 319/658 (48%), Positives = 383/658 (58%), Gaps = 17/658 (2%) Query: 12 PIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEG 71 P+ARV+ + +PHLDR FDY V +L + A PGVR +VRF G+LVD ++LER T++ Sbjct: 20 PVARVVVDVPLPHLDRPFDYQVPTDLDEVAVPGVRVRVRFAGQLVDGYLLERAESTEYGR 79 Query: 72 RLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPI 131 L +L+KVVSPEPVL +V L AVA RYAGT DVLR+A+PPRHA E P P P Sbjct: 80 GLAFLEKVVSPEPVLAPEVVELARAVADRYAGTLIDVLRMAVPPRHARAEAAEPPPPSPP 139 Query: 132 PAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVL 191 P D+ GW RY G FL AL GRA RAVWQALP E WP RLAE AA + G+GVL Sbjct: 140 PERPADT-GWGRYRHGANFLDALAAGRAPRAVWQALPAEDWPARLAEVAATVASTGKGVL 198 Query: 192 AIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVF 251 ++PD RD+ LH A V + V L+A LGP RY+RWLA RG R+ +G R A Sbjct: 199 VVVPDHRDLARLHEACARLVDPAAVTVLAAELGPQERYKRWLAVRRGSVRIALGARGAAL 258 Query: 252 APVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVR 311 APV DLGL++VWDDGDD AEPR PYP+ R+V + R+H A ++GG+ARTAEA LV Sbjct: 259 APVNDLGLVVVWDDGDDLHAEPRMPYPNVRDVLVQRSHLGGAAFLVGGFARTAEAQLLVD 318 Query: 312 TRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPV 371 + WAH++ + + +Q+ +DPAA SARLPS+A +AAR AL A PV Sbjct: 319 SGWAHEVVADRDELRAAAPRVVAVGDGDWQEAKDPAARSARLPSIAFEAARAALSAGAPV 378 Query: 372 LIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALP----DRDSAAAQCRWCGRAEPALRCA 427 LIQVPRRGYVP GPLALP D A CRWCG E A RC Sbjct: 379 LIQVPRRGYVPALACGQCRAAARCRRCAGPLALPGGGGDGAPRPAYCRWCGATEAAFRCP 438 Query: 428 RCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXX 487 CGS EELGRAF G V TSGGD V++ V G ALVV+TPGAEP Sbjct: 439 SCGSRRLRGQVIGARRTAEELGRAFSGVVVRTSGGDDVLAKVPGGPALVVATPGAEPVAD 498 Query: 488 XXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQAL 547 R DLRAAE+ +RRWM AAALVR GG + VVAES L VQAL Sbjct: 499 GGYGAALLLDGWALLGRADLRAAEEAVRRWMGAAALVRRGDRGGRIVVVAESSLAPVQAL 558 Query: 548 IRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPF 607 +RWDPV HA EL +R E+G PPAV MA +D +P A+ LL+ LPE E LGPV P Sbjct: 559 VRWDPVWHAGQELAARAELGFPPAVRMATLDASPDALAVLLEELRLPERGEVLGPV--PL 616 Query: 608 GARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPLHI 665 G R R LVRVP + EP RV++DPL + Sbjct: 617 GEER----------ERALVRVPRGDGRALSASLSDVLSVRSARKETEPVRVKVDPLEV 664 >tr|A4FBI9|A4FBI9_SACEN Tax_Id=405948 (priA)SubName: Full=Primosomal protein N' (Replication factor Y);[Saccharopolyspora erythraea] Length = 673 Score = 570 bits (1468), Expect = e-160 Identities = 319/629 (50%), Positives = 383/629 (60%), Gaps = 11/629 (1%) Query: 5 RRAAEHEPIARVLPMLSVP-HLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILER 63 R AA H P+ARVL + +P HLDR FDYL+ + L A PG R +VRF G+LVD F+LER Sbjct: 14 RTAAPHLPVARVLVEVPLPAHLDRPFDYLLPDRLDGAAVPGCRVRVRFSGKLVDGFLLER 73 Query: 64 RSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQ 123 R +D +G L W+++V SPEPVL+ ++ L AVAARY G DV+RLAIPPR A VEK+ Sbjct: 74 RESSDFKGSLLWVERVHSPEPVLSPELLELARAVAARYGGMLSDVVRLAIPPRQAKVEKE 133 Query: 124 TPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAAT 183 P+EP P PA WA Y G FL A+ GR ARAVWQALPGE WP RLAEAAA Sbjct: 134 APSEPVPPPARP-SGEAWAVYQHGGSFLDAVHAGRTARAVWQALPGEDWPTRLAEAAATA 192 Query: 184 VNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVV 243 +AG+G + ++PD RDV LHAA V + VVAL + LGP+ RYRRWL+ LRG RVV Sbjct: 193 ASAGRGAVIVVPDHRDVQRLHAACAELVGDDGVVALVSDLGPAERYRRWLSVLRGRTRVV 252 Query: 244 IGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYART 303 +GTR+A+FAPV DLGL +VWDDGDD + P+ PYPHAR+V RAH A V+GG+ART Sbjct: 253 VGTRAAMFAPVRDLGLAVVWDDGDDLHSYPQVPYPHARDVLTHRAHASGAALVVGGFART 312 Query: 304 AEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAART 363 AEA LV++ WA ++ + E Q RDPAA +ARLPS+A +AAR Sbjct: 313 AEAALLVQSGWAREIVAHRDQVRAAAPRVTAIGEDDTQLARDPAARAARLPSVAFEAARA 372 Query: 364 ALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALP----DRDSAAAQCRWCGR 419 AL A PVL+QVPRRGYVP GPLALP D A CRWCG Sbjct: 373 ALRAGAPVLVQVPRRGYVPALACGDCRESARCRRCAGPLALPGGTEDGAPKPAACRWCGA 432 Query: 420 AEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVST 479 AE A RC CGS EELGRAF G V TSGG V+ V ALVV T Sbjct: 433 AEAAFRCPSCGSRRLRAVAVGAGRTAEELGRAFSGVAVRTSGGGEVLESVPAGPALVVCT 492 Query: 480 PGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAES 539 PGAEP R +LRA+E LR W AAA +VRP DGG V V+A+S Sbjct: 493 PGAEPVAEGGYGAALLLDGRTLLSRPELRASEQALRLWFAAAGMVRPAKDGGRVVVMADS 552 Query: 540 VLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAER 599 L VQAL+RWDP A EL R E+G PPA +AAVDGTP+A+ +LL+ +P E Sbjct: 553 SLQQVQALVRWDPAWFAALELAGREELGFPPAKRVAAVDGTPEAIESLLEVVEMPATGEV 612 Query: 600 LGPVDLPFGARRPPGLDADAEVSRMLVRV 628 LGPV P G G ++E R+LVRV Sbjct: 613 LGPV--PIGEVDEEG---NSERERVLVRV 636 >tr|D1A823|D1A823_THECD Tax_Id=471852 SubName: Full=Primosomal protein N' (Replication factor Y)-superfamily II helicase-like protein;[Thermomonospora curvata] Length = 688 Score = 556 bits (1432), Expect = e-156 Identities = 326/665 (49%), Positives = 386/665 (58%), Gaps = 18/665 (2%) Query: 5 RRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERR 64 RR AE P+ARVL + +PHLDR FDYLV E+L A PG R +VRF G+LVD F+ ER Sbjct: 37 RRPAERLPVARVLVDVPLPHLDRPFDYLVPEQLDAQAVPGCRVRVRFAGQLVDGFLAERA 96 Query: 65 SDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQT 124 +DHEGRL +L++V+SPEPVLT ++ L VA RYAGT DVLRLAIPPRHA VE + Sbjct: 97 EGSDHEGRLLFLERVISPEPVLTGEIAALAREVADRYAGTVADVLRLAIPPRHARVEAEP 156 Query: 125 PAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATV 184 A P+P WA Y G FL AL G + RAVW ALPG WPQ +A A A + Sbjct: 157 AAAPQPWRPDPPAPGPWAHYPAGPSFLAALAAGGSPRAVWTALPGPDWPQAIARAVQAAL 216 Query: 185 NAGQGVLAIMPDQRDVDALHAAVTAHV-PESRVVALSAGLGPSARYRRWLAALRGHARVV 243 +G+G L ++ D R V + AA+ A + SR VAL+A GP+ RYRRWLA LRG AR V Sbjct: 217 ASGRGALVVLADGRQVARVDAALAAELQAPSRHVALTADQGPAERYRRWLAVLRGTARAV 276 Query: 244 IGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYART 303 +GTR+A+FAPV DLGL+++WDDGDD AEP APYPH REV LRAH+ A+IGG+ RT Sbjct: 277 VGTRAAMFAPVRDLGLVVLWDDGDDVHAEPHAPYPHPREVLALRAHRCGAGALIGGFCRT 336 Query: 304 AEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAART 363 +A LV T WA L + + RD AA +ARLP +AL+ AR Sbjct: 337 TDATVLVETGWARPLTAERARIRAVMPRVRPAGDDA-ELARDEAARTARLPDLALRTARR 395 Query: 364 ALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPA 423 AL AD PVL+QVPRRGY+P GPL+L AA CRWCGR Sbjct: 396 AL-ADGPVLVQVPRRGYLPGLRCERCREPVRCAACRGPLSLRSA-QAAPDCRWCGRIAGG 453 Query: 424 LRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTPGAE 483 RC CG EELGRAFPG PV TSG + V+ V G ALVVSTPGAE Sbjct: 454 WRCPECGWARLRAAVVGAKRTAEELGRAFPGVPVRTSGREGVLDAVDGRPALVVSTPGAE 513 Query: 484 PXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESVLPT 543 P R DLR AE+TLRRWM AAALVRP A V V+AE LP Sbjct: 514 PVAAGGYAAALLLDGWALLGRADLRVAEETLRRWMNAAALVRPAAP---VVVLAEGSLPP 570 Query: 544 VQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERLGPV 603 VQAL+RWDPV A+ EL R E+G PPAV MA++ GTP A+ LL+ A LP GAE LGPV Sbjct: 571 VQALLRWDPVTLAERELADRRELGFPPAVRMASLTGTPAAIRELLEAARLPPGAEVLGPV 630 Query: 604 DLPFGARRPPGLDADAE---VSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQI 660 P +A AE R LVRVP +P RVQI Sbjct: 631 --------PVTDEAAAEGPVKERALVRVPRRAGPALGRALKEAQGVRSARRAPDPVRVQI 682 Query: 661 DPLHI 665 DPL + Sbjct: 683 DPLEL 687 >tr|Q0RF88|Q0RF88_FRAAA Tax_Id=326424 (priA)SubName: Full=Primosomal protein N' (Replication factor Y);[Frankia alni] Length = 698 Score = 546 bits (1407), Expect = e-153 Identities = 324/677 (47%), Positives = 377/677 (55%), Gaps = 26/677 (3%) Query: 12 PIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEG 71 P+ARV + HLDR FDYLV +L+ A PG R +VRF GR VD F+LERR+ ++H G Sbjct: 26 PVARVAVDTPLTHLDRPFDYLVPADLAAAAVPGSRVRVRFAGRQVDGFVLERRAASEHPG 85 Query: 72 RLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQT-PAEPEP 130 RL L++ VSPEPVL+ + RL AVA RYAGT DVLRLA+PPRH E P+ P Sbjct: 86 RLAPLERSVSPEPVLSESIARLARAVADRYAGTLADVLRLAVPPRHGRTESAAVPSAPAG 145 Query: 131 IPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGV 190 A WARY G L AL GR++RAVW A PG WP +A A ATV +G+G Sbjct: 146 DVAPGERPEEWARYPAGPSMLAALAAGRSSRAVWWAPPGPAWPSMIAAAVGATVRSGRGA 205 Query: 191 LAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAV 250 + ++PD RDVD + AA+ V V L A LGPS RYR +LA RG ARVV+GTRSAV Sbjct: 206 VVVVPDHRDVDRVEAALVEVVGRETTVVLRADLGPSRRYRAFLAVSRGQARVVVGTRSAV 265 Query: 251 FAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALV 310 FAPVADLGL++VWDDGDD AEP APYPH R+VA+LRA Q CA +IGG+ T EA ALV Sbjct: 266 FAPVADLGLLVVWDDGDDLHAEPLAPYPHTRDVAVLRARQDGCALLIGGFCPTTEAEALV 325 Query: 311 RTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRP 370 R WAH L S ++ RDPAA +ARLPS+A++ AR AL A P Sbjct: 326 RGGWAHPL-VLPLPEVRALAPRVEATGSDHEYARDPAARAARLPSLAVRTARQALAAGAP 384 Query: 371 VLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAA--QCRWCGRAEPAL---- 424 VL+QVPRRGY P GPL R S A CRWCGR PA Sbjct: 385 VLVQVPRRGYHPSLACADCRRPARCRHCQGPLG---RSSGAGLLTCRWCGRPVPAAPDGP 441 Query: 425 ------RCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVS 478 RC C S EELGRAFP PV TSG D V++ V ALV+S Sbjct: 442 VGASVWRCPSCSSVRLRASVTGDRRTAEELGRAFPDVPVRTSGRDGVLAAVPAEPALVIS 501 Query: 479 TPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAE 538 TPGAEP R DLRAAE LRRW AAAAL RP GG V V A+ Sbjct: 502 TPGAEPVAAGGYGAVLLLDGWALLGRPDLRAAETALRRWAAAAALARPAPQGGRVIVSAD 561 Query: 539 SVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAE 598 + LP VQALIRWDP A E D R E+G PPA MA V+G AV LL LPEGA+ Sbjct: 562 AGLPVVQALIRWDPATFAAREADERAELGFPPATRMATVEGGAAAVAELLAVTRLPEGAD 621 Query: 599 RLGPVDLPFGARRPP---------GLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXX 649 LGPV +P AR P G D E+ R+L+RVP Sbjct: 622 LLGPVPVPPPARAAPTPAGGRGGAGPDEAGEIERLLIRVPRERGAALAAALHEARGVLGA 681 Query: 650 XHDQEPSRVQIDPLHIG 666 RVQ+DPL IG Sbjct: 682 RRSTAGLRVQLDPLVIG 698 >tr|C4RHQ8|C4RHQ8_9ACTO Tax_Id=219305 SubName: Full=Putative uncharacterized protein;[Micromonospora sp. ATCC 39149] Length = 622 Score = 539 bits (1389), Expect = e-151 Identities = 309/633 (48%), Positives = 369/633 (58%), Gaps = 15/633 (2%) Query: 32 LVSEELSDNAQPGVRAKVRFHGRLVDAFILERRSDTDHEGRLGWLDKVVSPEPVLTTDVR 91 +V EL+D A PG R KVRF G+LVD ++LER + H G+L +LD++VSPEPVL ++ Sbjct: 1 MVPAELADAAVPGTRVKVRFAGQLVDGWLLERAEASGHTGKLAYLDRLVSPEPVLAGEIA 60 Query: 92 RLVDAVAARYAGTRPDVLRLAIPPRHATVEKQTPAEPEPIPAIDV-DSSGWARYARGEQF 150 RL AVA RYAG+ DVLRLA+PPRHA VEK+ PEP +D +++GW Y G F Sbjct: 61 RLARAVADRYAGSLADVLRLAVPPRHARVEKEPHVPPEPRTPLDPPEAAGWRAYPAGPAF 120 Query: 151 LTALGEGRAARAVWQALPGEQWPQRLAEAAAATVNAGQGVLAIMPDQRDVDALHAAVTAH 210 L AL +GR ARAVW ALPGE WP R AEA AATV G+G + ++PD RD+D L AA+ Sbjct: 121 LRALTDGRPARAVWSALPGEDWPARYAEAVAATVAGGRGAVVVVPDARDLDRLDAALAVA 180 Query: 211 VPESRVVALSAGLGPSARYRRWLAALRGHARVVIGTRSAVFAPVADLGLILVWDDGDDNL 270 + R V+L+A GP+ RYR +LAA RG VVIGTR+A+FAPVA LGL+ + DDGDD Sbjct: 181 LGPGRHVSLAAAAGPARRYRAFLAARRGDVPVVIGTRAAMFAPVARLGLVAIVDDGDDLH 240 Query: 271 AEPRAPYPHAREVAMLRAHQLRCAAVIGGYARTAEAHALVRTRWAHDLXXXXXXXXXXXX 330 AEPRAPYPHAREV ++RA AA++GGYAR+AEA LV T WA ++ Sbjct: 241 AEPRAPYPHAREVLLIRARLADAAALVGGYARSAEAQLLVETGWAREVLADRATVRARTP 300 Query: 331 XXXXLEESRYQQERDPAAHSARLPSMALQAARTALDADRPVLIQVPRRGYVPXXXXXXXX 390 + Q RDP A +ARLPS+A AAR AL AD PVL+QVPRRGY+P Sbjct: 301 AVAPTGDDP-QLARDPGAATARLPSLAWAAARDALGADAPVLVQVPRRGYLPSISCADCR 359 Query: 391 XXXXXXXXXGPLALPDRDSAAAQCRWCGRAEPALRCARCGSDXXXXXXXXXXXXXEELGR 450 GPLALP A CRWCGR A C CG EELGR Sbjct: 360 APARCPHCAGPLALPSARGIPA-CRWCGRIAAAYACPECGGRRLRAAVTGARRTAEELGR 418 Query: 451 AFPGTPVITSGGDTVVSDVRGTRALVVSTPGAEPXXXXXXXXXXXXXXXXXXXRQDLRAA 510 AFPG PV TSG + V+S V G LVV+TPGAEP R DLRA Sbjct: 419 AFPGVPVRTSGREEVLSTVPGGAGLVVATPGAEPVTDGGYGAVLLLDSWALLTRADLRAG 478 Query: 511 EDTLRRWMAAAALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADAELDSRGEVGLPP 570 E+ LRRW+AAAAL RP + GG V VVA+ L VQAL+RWD A EL R E+G PP Sbjct: 479 EEALRRWLAAAALARPASAGGRVVVVADGALAPVQALLRWDAAWFAARELAERRELGFPP 538 Query: 571 AVHMAAVDGTPKAVTALLDHALLPEGAERLGPVDLPFGARRPPGLDADAEVSRMLVRVPX 630 AV MA+V G AV LL A LP AE LGPV AD E RMLVRVP Sbjct: 539 AVRMASVTGPADAVADLLAEARLPAEAEVLGPV------------PADGEKERMLVRVPR 586 Query: 631 XXXXXXXXXXXXXXXXXXXXHDQEPSRVQIDPL 663 +P R+Q+DPL Sbjct: 587 ARAAALAEALHAAAGARAARKAADPVRLQVDPL 619 >tr|Q8FT49|Q8FT49_COREF Tax_Id=152794 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens] Length = 685 Score = 539 bits (1388), Expect = e-151 Identities = 303/685 (44%), Positives = 380/685 (55%), Gaps = 19/685 (2%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 M R A P+ARVLP+L +PHLDR FDY +S + ++A+PGVR ++RF GRLVDA + Sbjct: 1 MANPRVPAPEVPVARVLPLLGLPHLDRLFDYRISADQHEDARPGVRVRIRFGGRLVDAIL 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 ++R TDH G L WLD+V+SP V RL++++ RY G R D++R AIP RHA Sbjct: 61 IDRTGHTDHAGELAWLDRVISPVVVYPEQTARLIESLTDRYGGVRSDLIRSAIPTRHAGA 120 Query: 121 EKQTPAEP-EPIPAI-DVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAE 178 E + P + A+ + D S W+ Y G+ F+ A+ G ARA WQ PG+ W +A Sbjct: 121 EDSDISTPWHDLGAVTEPDLSSWSAYQYGQSFVDAVLAGTTARAAWQIAPGDDWALAVAS 180 Query: 179 AAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRG 238 A V G G L ++PDQRDVD L AA+ A V +V L++GLGP ARYRR+L+ L G Sbjct: 181 LAVKVVKDGGGALIVVPDQRDVDKLEAALRALVAAKQVTVLNSGLGPQARYRRFLSVLSG 240 Query: 239 HARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIG 298 R+V+GTRSA FAPVADL L ++ DGDDNL +PRAPY HAREV R+ + +IG Sbjct: 241 QGRLVVGTRSAAFAPVADLKLTVILGDGDDNLVDPRAPYVHAREVLTTRSALEGSSLIIG 300 Query: 299 GYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMAL 358 G+ RTAE LV WAHDL + +S ++ ERDP A SARLP +A Sbjct: 301 GHTRTAETQLLVEAGWAHDLVAPRETIRTRMPRIQAVGDSDFELERDPLARSARLPGLAF 360 Query: 359 QAARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRD---SAAAQCR 415 +A R L + PVLIQVPR+GYVP GP+ LP D +A CR Sbjct: 361 RAVRDTLSRNEPVLIQVPRKGYVPTLACGNCRTPARCRHCNGPVGLPQSDQHQAAVPTCR 420 Query: 416 WCGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRAL 475 WCGR + RC CGS EELGRAFP T +ITSGG+ VV + + Sbjct: 421 WCGRPDTRFRCQACGSPKLRAVVLGAERTAEELGRAFPSTRIITSGGNRVVDHIDYRACI 480 Query: 476 VVSTPGAEP------------XXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAAL 523 VVSTPGAEP RQDLRA EDTL++W AAA L Sbjct: 481 VVSTPGAEPAVHTGVDCYSGDTSRGAYGACLLLDTWALMGRQDLRATEDTLQKWAAAATL 540 Query: 524 VRPRADGGVVAVVAESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKA 583 V GG V VVA+ L VQ+LIRWD VG A +EL SR EV PPAVHMAA+DG A Sbjct: 541 VHSHIHGGHVVVVADPSLAVVQSLIRWDMVGAAASELASRREVRFPPAVHMAAIDGAAAA 600 Query: 584 VTALLDHALLPEGAERLGPVDLPFGARRPPGLDAD--AEVSRMLVRVPXXXXXXXXXXXX 641 + + ++ LP AE LGPVDLP G P D RML+R P Sbjct: 601 LDSFVELVELPAHAEVLGPVDLPPGVTLPGEYDEARFGPPQRMLIRTPLGPRSELGRALR 660 Query: 642 XXXXXXXXXHDQEPSRVQIDPLHIG 666 + P RVQ+DP+HIG Sbjct: 661 SAQVARAARKNDLPLRVQMDPIHIG 685 >tr|C8NP31|C8NP31_COREF Tax_Id=196164 (priA)SubName: Full=Primosomal protein N'; EC=3.6.1.-;[Corynebacterium efficiens YS-314] Length = 685 Score = 539 bits (1388), Expect = e-151 Identities = 303/685 (44%), Positives = 380/685 (55%), Gaps = 19/685 (2%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 M R A P+ARVLP+L +PHLDR FDY +S + ++A+PGVR ++RF GRLVDA + Sbjct: 1 MANPRVPAPEVPVARVLPLLGLPHLDRLFDYRISADQHEDARPGVRVRIRFGGRLVDAIL 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 ++R TDH G L WLD+V+SP V RL++++ RY G R D++R AIP RHA Sbjct: 61 IDRTGHTDHAGELAWLDRVISPVVVYPEQTARLIESLTDRYGGVRSDLIRSAIPTRHAGA 120 Query: 121 EKQTPAEP-EPIPAI-DVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAE 178 E + P + A+ + D S W+ Y G+ F+ A+ G ARA WQ PG+ W +A Sbjct: 121 EDSDISTPWHDLGAVTEPDLSSWSAYQYGQSFVDAVLAGTTARAAWQIAPGDDWALAVAS 180 Query: 179 AAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRG 238 A V G G L ++PDQRDVD L AA+ A V +V L++GLGP ARYRR+L+ L G Sbjct: 181 LAVKVVKDGGGALIVVPDQRDVDKLEAALRALVAAKQVTVLNSGLGPQARYRRFLSVLSG 240 Query: 239 HARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIG 298 R+V+GTRSA FAPVADL L ++ DGDDNL +PRAPY HAREV R+ + +IG Sbjct: 241 QGRLVVGTRSAAFAPVADLKLTVILGDGDDNLVDPRAPYVHAREVLTTRSALEGSSLIIG 300 Query: 299 GYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMAL 358 G+ RTAE LV WAHDL + +S ++ ERDP A SARLP +A Sbjct: 301 GHTRTAETQLLVEAGWAHDLVAPRETIRTRMPRIQAVGDSDFELERDPLARSARLPGLAF 360 Query: 359 QAARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRD---SAAAQCR 415 +A R L + PVLIQVPR+GYVP GP+ LP D +A CR Sbjct: 361 RAVRDTLSRNEPVLIQVPRKGYVPTLACGNCRTPARCRHCNGPVGLPQSDQHQAAVPTCR 420 Query: 416 WCGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRAL 475 WCGR + RC CGS EELGRAFP T +ITSGG+ VV + + Sbjct: 421 WCGRPDTRFRCQACGSPKLRAVVLGAERTAEELGRAFPSTRIITSGGNRVVDHIDYRACI 480 Query: 476 VVSTPGAEP------------XXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAAL 523 VVSTPGAEP RQDLRA EDTL++W AAA L Sbjct: 481 VVSTPGAEPAVHTGVDCYSGDTSRGAYGACLLLDTWALMGRQDLRATEDTLQKWAAAATL 540 Query: 524 VRPRADGGVVAVVAESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKA 583 V GG V VVA+ L VQ+LIRWD VG A +EL SR EV PPAVHMAA+DG A Sbjct: 541 VHSHIHGGHVVVVADPSLAVVQSLIRWDMVGAAASELASRREVRFPPAVHMAAIDGAAAA 600 Query: 584 VTALLDHALLPEGAERLGPVDLPFGARRPPGLDAD--AEVSRMLVRVPXXXXXXXXXXXX 641 + + ++ LP AE LGPVDLP G P D RML+R P Sbjct: 601 LDSFVELVELPAHAEVLGPVDLPPGVTLPGEYDEARFGPPQRMLIRTPLGPRSELGRALR 660 Query: 642 XXXXXXXXXHDQEPSRVQIDPLHIG 666 + P RVQ+DP+HIG Sbjct: 661 SAQVARAARKNDLPLRVQMDPIHIG 685 >tr|Q47R06|Q47R06_THEFY Tax_Id=269800 SubName: Full=Primosomal protein N' (Replication factor Y) (Superfamily II helicase);[Thermobifida fusca] Length = 677 Score = 535 bits (1379), Expect = e-150 Identities = 310/665 (46%), Positives = 378/665 (56%), Gaps = 17/665 (2%) Query: 4 TRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFILER 63 +RR A +ARV+ +PHLD FDY V E L +A PG R +VRF+G+L+D F+LER Sbjct: 26 SRRPAPTRSVARVVVDTPLPHLDHPFDYRVPESLDQDAVPGCRVRVRFNGQLLDGFLLER 85 Query: 64 RSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATVEKQ 123 +D GRL +L +VVSPEPVLT ++ L VA YAGT DVLRLAIPPRHA VEK+ Sbjct: 86 ADTSDFPGRLAYLHQVVSPEPVLTPEIAALARIVADHYAGTLSDVLRLAIPPRHARVEKE 145 Query: 124 TP---AEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA 180 TP P P+P D D WA Y G FLTAL + RA RAVW ALPG QW +A AA Sbjct: 146 TPHTPPPPPPLPEPDPDPGPWADYPTGPAFLTALRDQRAPRAVWTALPGPQWRDAIAAAA 205 Query: 181 AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA 240 AG+GVL ++P RDV +L AA+TA + VAL+A LGP+ RYRRWL+ LRGH Sbjct: 206 HTAAVAGRGVLIVVPTGRDVASLDAALTARLGPGHHVALTAELGPAERYRRWLSVLRGHV 265 Query: 241 RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY 300 RVV+GTR+A+FAPV DLGL+++WDDGDD ++P APYPHAR V LRAH R A +IG + Sbjct: 266 RVVVGTRAAMFAPVRDLGLVVLWDDGDDVHSDPHAPYPHARTVLSLRAHYSRSAVLIGSH 325 Query: 301 ARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMALQA 360 RTAE+ LV + WAH + + + RD AA +ARLPS+AL+ Sbjct: 326 TRTAESALLVESGWAHPIVADRALVRRRAPLVRAAGDDA-ELARDEAARTARLPSLALRV 384 Query: 361 ARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAAQCRWCGRA 420 AR A PVL QVPRRGY+ GPLAL A CRWCG Sbjct: 385 ARQAA-RHGPVLFQVPRRGYLNALACARCRTPARCAACRGPLALRSA-HAIPYCRWCGHI 442 Query: 421 EPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTP 480 RC C EELGRAFP PV TSG D V+++V T ALVV+TP Sbjct: 443 AGDWRCPSCEFPRLRATVVGARRTAEELGRAFPALPVRTSGRDEVLTEVPATPALVVATP 502 Query: 481 GAEPXXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESV 540 GAEP R DLRAAE+ LRRW AAALVRP A+GG V V+A++ Sbjct: 503 GAEPTVPGGYAAAVLLDGWALLGRADLRAAEEALRRWCNAAALVRPAAEGGQVVVLADAA 562 Query: 541 LPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERL 600 LP VQALIRW P A+ EL R E+G PPAV MA+V G P+ V L LPE AE L Sbjct: 563 LPAVQALIRWSPAAFAERELAERRELGFPPAVTMASVTGDPERVREFLAQLDLPEAAELL 622 Query: 601 GPVDLPFGARRPPGLDADAEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXHDQEPSRVQI 660 GPV P G D R L+R+ +++ V++ Sbjct: 623 GPV--------PVGTDG---TERALLRIRRAAARELSAALKAASAARSARREEKSVHVRV 671 Query: 661 DPLHI 665 DPL + Sbjct: 672 DPLDV 676 >tr|Q6NH21|Q6NH21_CORDI Tax_Id=1717 SubName: Full=Putative primosomal protein;[Corynebacterium diphtheriae] Length = 675 Score = 534 bits (1375), Expect = e-149 Identities = 295/675 (43%), Positives = 385/675 (57%), Gaps = 9/675 (1%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 M+ TR AA P+ARVLP+L V HLDR F+YLV +SD+AQPGV+ +VRF GRLVD I Sbjct: 1 MSKTRVAASSLPVARVLPLLGVAHLDRVFEYLVDSTMSDDAQPGVKVRVRFGGRLVDGII 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 LER S +HEGRL WLDKV S PV T +RRL+++++ RYAG DV+R AIP RHA V Sbjct: 61 LERTSGQEHEGRLAWLDKVQSSVPVYTPALRRLIESLSTRYAGITSDVIRSAIPSRHAKV 120 Query: 121 EK-QTPAEPEPIPAIDV-DSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAE 178 E+ + + +D D S WA+Y G+ F+ A+ + ARA WQ PGE W +A Sbjct: 121 EEGDFSTSWDDLGDVDEPDLSMWAKYVHGKSFVDAVIACQTARAAWQIAPGENWAAAIAA 180 Query: 179 AAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRG 238 AG GVL ++PDQRDV+ L AA V ++ +++ GP ARYRR+L+ L G Sbjct: 181 LGTKVAIAGGGVLIVVPDQRDVETLEAAFRGLVSARQITVMTSAQGPQARYRRFLSILHG 240 Query: 239 HARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIG 298 R+V+GTRSA FAPV +L L ++ DDGD+NL +PR+PY HAREV R+ Q C+ ++ Sbjct: 241 QGRIVVGTRSAAFAPVVNLQLAVIKDDGDENLVDPRSPYIHAREVLSTRSTQEHCSLILA 300 Query: 299 GYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMAL 358 G++R+ EA LV++ WAH+L + ++ ERDP A +AR+PS A Sbjct: 301 GHSRSTEAQLLVQSGWAHNLVVDRERVRKMMPRIHAVADTNTALERDPLARAARIPSAAF 360 Query: 359 QAARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAA---AQCR 415 + R AL +RPVLI VPR+GY+P GPL LP +S A QCR Sbjct: 361 SSLRDALKRNRPVLIHVPRKGYIPVLACQQCRSAARCRYCNGPLELPFPESGAPQTPQCR 420 Query: 416 WCGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRAL 475 WCGR + RC CGS EE+GRAFP T V+ SGG+ V + + Sbjct: 421 WCGRPDSHFRCTHCGSSNLRAIVLGAERTAEEIGRAFPQTRVVVSGGNRVHDTIPDAPIV 480 Query: 476 VVSTPGAEP--XXXXXXXXXXXXXXXXXXXRQDLRAAEDTLRRWMAAAALVRPRADGGVV 533 VV+TPGAEP RQDLRA+EDTL +W + LV P GG V Sbjct: 481 VVATPGAEPEIADDGRYGAAVLLDTWALLSRQDLRASEDTLAKWFSVCTLVEPCVVGGEV 540 Query: 534 AVVAESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALL 593 VVA++ L VQALIRWDP+ A EL+ R EV PPA HMAA+DG A+ LD L Sbjct: 541 VVVADAGLFEVQALIRWDPIWAASRELELRQEVHFPPAAHMAAIDGARDAIDEFLDMIQL 600 Query: 594 PEGAERLGPVDLPFGARRPPGLDAD--AEVSRMLVRVPXXXXXXXXXXXXXXXXXXXXXH 651 P+ AE LGPV LP G + P D + R+L+R+P Sbjct: 601 PDHAEILGPVSLPAGNKLPGEYDENTYGPPQRVLIRIPLKDRNELGEVLRSGIVQRSAKR 660 Query: 652 DQEPSRVQIDPLHIG 666 + P RV+IDP+H+G Sbjct: 661 KELPLRVKIDPIHVG 675 >tr|Q8NQ45|Q8NQ45_CORGL Tax_Id=1718 (priA)SubName: Full=Primosomal protein N' (Replication factor Y)-superfamily II helicase;[Corynebacterium glutamicum] Length = 688 Score = 533 bits (1374), Expect = e-149 Identities = 298/688 (43%), Positives = 379/688 (55%), Gaps = 22/688 (3%) Query: 1 MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI 60 M TR A + +ARVLP+L +PHLDR FDY +SE+ D+ QPGVR +VRF GRLVDA + Sbjct: 1 MAKTRVPAPEKSVARVLPLLGLPHLDRLFDYRISEDQHDDVQPGVRVRVRFGGRLVDAIV 60 Query: 61 LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV 120 + R + T HEG+L WLD+V+SP V +L++ ++ RY G R D++R A+P RHA Sbjct: 61 MSRTAQTSHEGKLMWLDRVISPIVVYPPQTAKLIEQLSDRYGGVRSDLIRSALPARHAGA 120 Query: 121 EK-QTPAEPEPIPAI-DVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAE 178 E+ T E + + + D S W+ Y G+ F+ A+ G ARA WQ PG+ W LA Sbjct: 121 EEADTSTSWESLGEVKEPDLSSWSAYQHGQSFVDAVLAGTTARASWQIAPGDDWALALAS 180 Query: 179 AAAATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRG 238 A V G G L ++PDQRD+D L AA+ V ++ L++GLGP ARYRR+L+ L G Sbjct: 181 LAVKVVKDGGGALLVVPDQRDLDRLEAALRGLVAAKQITVLNSGLGPQARYRRFLSVLSG 240 Query: 239 HARVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIG 298 R++IGTRSA FAPV DL L ++ +DGDDNL +PRAPY HAREV R+ + +I Sbjct: 241 QGRLIIGTRSAAFAPVKDLKLAVILNDGDDNLVDPRAPYAHAREVLTTRSSLEASSLIIA 300 Query: 299 GYARTAEAHALVRTRWAHDLXXXXXXXXXXXXXXXXLEESRYQQERDPAAHSARLPSMAL 358 G+ARTAE LV + W H+L + +S +Q ERDP A SARLP +A Sbjct: 301 GHARTAETQLLVESGWMHNLIAPRDTIRTRMPRIQAVGDSDFQMERDPMARSARLPGIAF 360 Query: 359 QAARTALDADRPVLIQVPRRGYVPXXXXXXXXXXXXXXXXXGPLALPDRDSAAA---QCR 415 A R+AL+ D+P LIQVPR+GYVP GP+ LP S A CR Sbjct: 361 HAVRSALERDQPALIQVPRKGYVPTLACGNCRTPARCRHCNGPVGLPQGSSDLAGVPTCR 420 Query: 416 WCGRAEPALRCARCGSDXXXXXXXXXXXXXEELGRAFPGTPVITSGGDTVVSDVRGTRAL 475 WCGR + +C CGS EELGRAFP VITSGG+ VV V ++ Sbjct: 421 WCGRPDSRFKCQNCGSPKLRAVVLGTERTAEELGRAFPSVRVITSGGNKVVDSVENRASI 480 Query: 476 VVSTPGAEPXXXXXXXXXXXXXXXXXXX---------------RQDLRAAEDTLRRWMAA 520 VVSTPGAEP RQDLRA ED L +W AA Sbjct: 481 VVSTPGAEPFVANSPERPEKSEKPEHKGAYGALLLLDTWALMGRQDLRAMEDALHKWAAA 540 Query: 521 AALVRPRADGGVVAVVAESVLPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGT 580 A LV G V VVA+ P VQ+LIRWD G A EL SR EV PP+VHMAA+DG Sbjct: 541 ATLVHSHLHQGQVIVVADPSFPAVQSLIRWDMAGAAAQELASRREVMFPPSVHMAAIDGA 600 Query: 581 PKAVTALLDHALLPEGAERLGPVDLPFGARRPPGLDAD--AEVSRMLVRVPXXXXXXXXX 638 A+ + LD A LP+ AE LGPVDLP G P D R+L+R P Sbjct: 601 TAALESFLDLAELPDHAEVLGPVDLPPGVSLPGEYDEQRFGPPQRLLIRTPLGPRSELGR 660 Query: 639 XXXXXXXXXXXXHDQEPSRVQIDPLHIG 666 + P R+Q+DP+HIG Sbjct: 661 ALRSAQVARAVRKNDLPLRIQMDPIHIG 688 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.320 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 4,882,070,478 Number of extensions: 193104724 Number of successful extensions: 506785 Number of sequences better than 10.0: 2061 Number of HSP's gapped: 507888 Number of HSP's successfully gapped: 2431 Length of query: 666 Length of database: 4,236,830,644 Length adjustment: 145 Effective length of query: 521 Effective length of database: 2,423,190,364 Effective search space: 1262482179644 Effective search space used: 1262482179644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 84 (37.0 bits)