BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3172 (463 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QX48|A0QX48_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 837 0.0 tr|Q1B7D2|Q1B7D2_MYCSS Tax_Id=164756 SubName: Full=DNA-directed ... 645 0.0 tr|A1UHP1|A1UHP1_MYCSK Tax_Id=189918 SubName: Full=DNA-directed ... 645 0.0 tr|A3Q167|A3Q167_MYCSJ Tax_Id=164757 SubName: Full=DNA-directed ... 642 0.0 tr|A1T8S8|A1T8S8_MYCVP Tax_Id=350058 SubName: Full=DNA-directed ... 640 0.0 tr|Q740U4|Q740U4_MYCPA Tax_Id=1770 (dinX)SubName: Full=DinX;[Myc... 636 e-180 tr|A0QHM7|A0QHM7_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 629 e-178 tr|D5P2N3|D5P2N3_9MYCO Tax_Id=525368 (dinX)SubName: Full=DNA pol... 621 e-176 tr|A4T9J7|A4T9J7_MYCGI Tax_Id=350054 SubName: Full=DNA-directed ... 620 e-175 tr|B2HQ65|B2HQ65_MYCMM Tax_Id=216594 (dinP_1)SubName: Full=DNA p... 615 e-174 tr|A0PNX8|A0PNX8_MYCUA Tax_Id=362242 (dinP_1)SubName: Full=DNA p... 610 e-172 sp|P63985|DPO41_MYCTU Tax_Id=1773 (dinB1)RecName: Full=DNA polym... 608 e-172 sp|P63986|DPO41_MYCBO Tax_Id=1765 (dinB1)RecName: Full=DNA polym... 608 e-172 tr|D5YRH7|D5YRH7_MYCTU Tax_Id=515616 SubName: Full=DNA polymeras... 608 e-172 tr|A4KH83|A4KH83_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 608 e-172 tr|A2VI54|A2VI54_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 608 e-172 tr|C6DSQ5|C6DSQ5_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 605 e-171 tr|D6G8U7|D6G8U7_MYCTU Tax_Id=478435 SubName: Full=DNA polymeras... 605 e-171 tr|C1ANH3|C1ANH3_MYCBT Tax_Id=561275 (dinX)SubName: Full=DNA pol... 600 e-169 tr|A5U2P4|A5U2P4_MYCTA Tax_Id=419947 (dinX)SubName: Full=DNA pol... 600 e-169 tr|A1KIW7|A1KIW7_MYCBP Tax_Id=410289 (dinX)SubName: Full=Probabl... 600 e-169 tr|D6FT75|D6FT75_MYCTU Tax_Id=611304 SubName: Full=DNA polymeras... 600 e-169 tr|D6FH49|D6FH49_MYCTU Tax_Id=611303 SubName: Full=DNA polymeras... 600 e-169 tr|D6F8Q1|D6F8Q1_MYCTU Tax_Id=611302 SubName: Full=DNA polymeras... 600 e-169 tr|D5ZFX4|D5ZFX4_MYCTU Tax_Id=537210 SubName: Full=DNA polymeras... 600 e-169 tr|D5YF45|D5YF45_MYCTU Tax_Id=520140 SubName: Full=DNA polymeras... 600 e-169 tr|D5Y3J5|D5Y3J5_MYCTU Tax_Id=520141 SubName: Full=DNA polymeras... 600 e-169 tr|A5WMM4|A5WMM4_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 598 e-169 tr|D5Z431|D5Z431_MYCTU Tax_Id=537209 SubName: Full=DNA polymeras... 597 e-168 tr|B1MC11|B1MC11_MYCA9 Tax_Id=561007 SubName: Full=DNA polymeras... 587 e-165 tr|D5USG4|D5USG4_TSUPA Tax_Id=521096 SubName: Full=DNA-directed ... 521 e-146 tr|D5PP26|D5PP26_COREQ Tax_Id=525370 SubName: Full=DNA polymeras... 519 e-145 tr|Q5YYW6|Q5YYW6_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p... 517 e-144 tr|Q0SHT2|Q0SHT2_RHOSR Tax_Id=101510 SubName: Full=DNA polymeras... 508 e-142 tr|C1AU44|C1AU44_RHOOB Tax_Id=632772 (dinB)SubName: Full=DNA pol... 508 e-142 tr|C1A0W3|C1A0W3_RHOE4 Tax_Id=234621 (dinB)SubName: Full=DNA pol... 503 e-140 tr|D5XTI0|D5XTI0_MYCTU Tax_Id=515617 SubName: Full=DNA polymeras... 501 e-140 tr|C3JJ35|C3JJ35_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 491 e-137 tr|D0LAR7|D0LAR7_GORB4 Tax_Id=526226 SubName: Full=DNA-directed ... 471 e-130 tr|C0XS17|C0XS17_9CORY Tax_Id=525263 (dinB)SubName: Full=DNA pol... 446 e-123 tr|C6RAV1|C6RAV1_9CORY Tax_Id=553206 SubName: Full=DNA polymeras... 431 e-119 sp|A4QFK8|DPO4_CORGB Tax_Id=340322 (dinB)RecName: Full=DNA polym... 430 e-118 tr|D5NU11|D5NU11_CORAM Tax_Id=649754 SubName: Full=ATP-NAD kinas... 429 e-118 tr|C2BNK8|C2BNK8_9CORY Tax_Id=525264 (dinB)SubName: Full=DNA pol... 429 e-118 tr|C8NTM3|C8NTM3_9CORY Tax_Id=585529 (ppnK)SubName: Full=ATP-NAD... 428 e-118 >tr|A0QX48|A0QX48_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 463 Score = 837 bits (2162), Expect = 0.0 Identities = 432/463 (93%), Positives = 432/463 (93%) Query: 1 MEGTVARTASRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRY 60 MEGTVARTASRRWVLHLDMDAFFASVEQLTRPT SYEARRY Sbjct: 1 MEGTVARTASRRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARRY 60 Query: 61 GARSAMPMHQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPS 120 GARSAMPMHQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPS Sbjct: 61 GARSAMPMHQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPS 120 Query: 121 ELAGAEAADVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEE 180 ELAGAEAADVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEE Sbjct: 121 ELAGAEAADVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEE 180 Query: 181 AVLLHGLPVRKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARG 240 AVLLHGLPVRKLWGIGPVAEDRLHRIGIETIG NVLGSTIGPALHRLARG Sbjct: 181 AVLLHGLPVRKLWGIGPVAEDRLHRIGIETIGAFAALTEAEAANVLGSTIGPALHRLARG 240 Query: 241 IDDRPVAERAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKL 300 IDDRPVAERAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKL Sbjct: 241 IDDRPVAERAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKL 300 Query: 301 KKSDMSTLTRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLF 360 KKSDMSTLTRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLF Sbjct: 301 KKSDMSTLTRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLF 360 Query: 361 PDLEQPEEFPDAAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFET 420 PDLEQPEEFPDAAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFET Sbjct: 361 PDLEQPEEFPDAAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFET 420 Query: 421 RASGPGPARTFPEDSPEISRADPVDSLDWAEYLSSLADYQSTP 463 RASGPGPARTFPEDSPEISRADPVDSLDWAEYLSSLADYQSTP Sbjct: 421 RASGPGPARTFPEDSPEISRADPVDSLDWAEYLSSLADYQSTP 463 >tr|Q1B7D2|Q1B7D2_MYCSS Tax_Id=164756 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 452 Score = 645 bits (1663), Expect = 0.0 Identities = 329/445 (73%), Positives = 367/445 (82%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 2 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVHGARSAMPMHQA 61 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRLVGAPAVVLPPRG VYG+ASRR DTVR++VPVLEQLSFDEAFGEP ELAGA AADVE Sbjct: 62 RRLVGAPAVVLPPRGVVYGLASRRVFDTVRTLVPVLEQLSFDEAFGEPQELAGASAADVE 121 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCE LRA+VLE TGLVASVGAGSGKQIAKIASGLAKPDGIRVVRR +E LL L VRK Sbjct: 122 EFCELLRARVLEETGLVASVGAGSGKQIAKIASGLAKPDGIRVVRRADERRLLDSLAVRK 181 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAED+LHR+GIETIG ++LG+T+GPALHRLARGID+RPVAERAE Sbjct: 182 LWGIGPVAEDKLHRLGIETIGQLAALSEAEVADILGATVGPALHRLARGIDERPVAERAE 241 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTFP DL TL Q+++AI PI +HAHRRL KDGRGARTVTVKLKKSDMSTLTRS Sbjct: 242 AKQISAESTFPADLITLDQVREAIGPIADHAHRRLAKDGRGARTVTVKLKKSDMSTLTRS 301 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL ATT+A+TL TARRLL+DPVEIGPIRLVGVGFSGLS++RQESLFPDLE E+ P Sbjct: 302 ATLPSATTDAATLSATARRLLVDPVEIGPIRLVGVGFSGLSEVRQESLFPDLELVEDEPA 361 Query: 372 AAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 P V + ++ WRVGDDVAH ELGHGW+QGAGHGVMT+RFETR++GPGPA+TF Sbjct: 362 TRPAVPMSVSEAAAVPPAWRVGDDVAHPELGHGWIQGAGHGVMTIRFETRSTGPGPAKTF 421 Query: 432 PEDSPEISRADPVDSLDWAEYLSSL 456 P+ P++ RA+PVDSLDWA+Y+ +L Sbjct: 422 PDTVPDVVRANPVDSLDWADYVDAL 446 >tr|A1UHP1|A1UHP1_MYCSK Tax_Id=189918 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 452 Score = 645 bits (1663), Expect = 0.0 Identities = 329/445 (73%), Positives = 367/445 (82%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 2 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVHGARSAMPMHQA 61 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRLVGAPAVVLPPRG VYG+ASRR DTVR++VPVLEQLSFDEAFGEP ELAGA AADVE Sbjct: 62 RRLVGAPAVVLPPRGVVYGLASRRVFDTVRTLVPVLEQLSFDEAFGEPQELAGASAADVE 121 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCE LRA+VLE TGLVASVGAGSGKQIAKIASGLAKPDGIRVVRR +E LL L VRK Sbjct: 122 EFCELLRARVLEETGLVASVGAGSGKQIAKIASGLAKPDGIRVVRRADERRLLDSLAVRK 181 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAED+LHR+GIETIG ++LG+T+GPALHRLARGID+RPVAERAE Sbjct: 182 LWGIGPVAEDKLHRLGIETIGQLAALSEAEVADILGATVGPALHRLARGIDERPVAERAE 241 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTFP DL TL Q+++AI PI +HAHRRL KDGRGARTVTVKLKKSDMSTLTRS Sbjct: 242 AKQISAESTFPADLITLDQVREAIGPIADHAHRRLAKDGRGARTVTVKLKKSDMSTLTRS 301 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL ATT+A+TL TARRLL+DPVEIGPIRLVGVGFSGLS++RQESLFPDLE E+ P Sbjct: 302 ATLPSATTDAATLSATARRLLVDPVEIGPIRLVGVGFSGLSEVRQESLFPDLELVEDEPA 361 Query: 372 AAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 P V + ++ WRVGDDVAH ELGHGW+QGAGHGVMT+RFETR++GPGPA+TF Sbjct: 362 TRPAVPMSVSEAAAVPPAWRVGDDVAHPELGHGWIQGAGHGVMTIRFETRSTGPGPAKTF 421 Query: 432 PEDSPEISRADPVDSLDWAEYLSSL 456 P+ P++ RA+PVDSLDWA+Y+ +L Sbjct: 422 PDTVPDVVRANPVDSLDWADYVDAL 446 >tr|A3Q167|A3Q167_MYCSJ Tax_Id=164757 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 452 Score = 642 bits (1656), Expect = 0.0 Identities = 329/445 (73%), Positives = 365/445 (82%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 2 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVHGARSAMPMHQA 61 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRLVGAPAVVLPPRG VYG+ASRR DTVR++VPVLEQLSFDEAFGEP ELAGA AADVE Sbjct: 62 RRLVGAPAVVLPPRGVVYGLASRRVFDTVRTLVPVLEQLSFDEAFGEPQELAGASAADVE 121 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCE LRA+VLE TGLVASVGAGSGKQIAKIASGLAKPDGIRVVRR +E LL L VRK Sbjct: 122 EFCELLRARVLEETGLVASVGAGSGKQIAKIASGLAKPDGIRVVRRADERRLLDSLAVRK 181 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAEDRLHR+GIETIG ++LG+T+GPALHRLARGIDDRPVAERAE Sbjct: 182 LWGIGPVAEDRLHRLGIETIGQLAALSEAEVADILGATVGPALHRLARGIDDRPVAERAE 241 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTFP DL TL Q+++AI PI +HAHRRL KDGRGARTVTVKLKKSDMSTLTRS Sbjct: 242 AKQISAESTFPADLITLDQVREAIGPIADHAHRRLAKDGRGARTVTVKLKKSDMSTLTRS 301 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL ATT+A+TL TARRLL+DP EIGPIRLVGVGFSGLS++RQESLFPDLE E+ Sbjct: 302 ATLPSATTDAATLSATARRLLVDPAEIGPIRLVGVGFSGLSEVRQESLFPDLELVEDELA 361 Query: 372 AAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 P V + ++ WRVGDDVAH ELGHGW+QGAGHGVMT+RFETR++GPGPA+TF Sbjct: 362 TRPAVPMSVSEAAAVPPAWRVGDDVAHPELGHGWIQGAGHGVMTIRFETRSTGPGPAKTF 421 Query: 432 PEDSPEISRADPVDSLDWAEYLSSL 456 P+ P++ RA+PVDSLDWA+Y+ +L Sbjct: 422 PDTVPDVVRANPVDSLDWADYVDAL 446 >tr|A1T8S8|A1T8S8_MYCVP Tax_Id=350058 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 453 Score = 640 bits (1650), Expect = 0.0 Identities = 324/452 (71%), Positives = 369/452 (81%), Gaps = 2/452 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYE+R +GARSAMPM QA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGVGGRGVVAGASYESRVFGARSAMPMLQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 +RLVGA AVVLPPRG VYG ASRR +TVR++VPVLEQLSFDEAFGEP++LAGA +VE Sbjct: 64 KRLVGAAAVVLPPRGVVYGTASRRVFETVRTLVPVLEQLSFDEAFGEPTDLAGAAEPEVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 AFC LR++VL TGLVASVGAGSGKQ+AKIASGLAKPDGIRV+ R+EEA LL GLPVR+ Sbjct: 124 AFCAELRSRVLAVTGLVASVGAGSGKQVAKIASGLAKPDGIRVIDRDEEATLLAGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAEDRLHR+GIETIG N+LG+T+GPALHRLARG+DDRPVAE A Sbjct: 184 LWGIGPVAEDRLHRLGIETIGALAALSEAEVANILGATVGPALHRLARGVDDRPVAENAP 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF +DLTT+AQL++AI PIG+HAH+RL KDGRGARTVTVKLK+SDMSTLTRS Sbjct: 244 AKQISAESTFAQDLTTIAQLREAIGPIGDHAHKRLTKDGRGARTVTVKLKRSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL YATTEA+TLIGTARRLLLDPVEIGP+RLVGVGFSGLS ++QE LFPDLE E+ D Sbjct: 304 ATLPYATTEATTLIGTARRLLLDPVEIGPVRLVGVGFSGLSQVQQEPLFPDLETVEQTSD 363 Query: 372 AAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 A V ++P WRVGDDVAHT+ GHGWVQGAGHGVMTVRFETR +GPGPARTF Sbjct: 364 DAAPVTLADVAATAPA--WRVGDDVAHTDHGHGWVQGAGHGVMTVRFETRGTGPGPARTF 421 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLADYQSTP 463 D P ++RA+PVDSLDW +++ +A +Q+TP Sbjct: 422 RADDPALTRANPVDSLDWPDFVEEMARHQNTP 453 >tr|Q740U4|Q740U4_MYCPA Tax_Id=1770 (dinX)SubName: Full=DinX;[Mycobacterium paratuberculosis] Length = 463 Score = 636 bits (1640), Expect = e-180 Identities = 329/458 (71%), Positives = 366/458 (79%), Gaps = 11/458 (2%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 +RLVG AVVLPPRG VYGVASRR DT+R+VVPV+EQLSFDE FGEP++LAGA A DVE Sbjct: 64 KRLVGVSAVVLPPRGVVYGVASRRVFDTIRAVVPVVEQLSFDEGFGEPAQLAGAPAQDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 AFCE+LR +V E TGL+ASVGAGSGKQIAKIASGLAKPDG+RVVRR EE LL GLPVR+ Sbjct: 124 AFCEQLRRRVREQTGLIASVGAGSGKQIAKIASGLAKPDGVRVVRRAEERELLGGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPVAERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGELAALTDAEAANILGATIGPALHRLARGIDDRPVAERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQIS+ESTF DLTTL QL++AI PI EHAH RL +DGRGARTVTVKLKKSDMSTLTRS Sbjct: 244 AKQISSESTFAADLTTLEQLREAIEPIAEHAHHRLLRDGRGARTVTVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL YATTEA+ L+G ARRLLLDP EIGPIRL+GVGFSGLS++RQESLFPDLE P D Sbjct: 304 ATLPYATTEAAALVGVARRLLLDPREIGPIRLLGVGFSGLSEVRQESLFPDLEMPAPQSD 363 Query: 372 AAPQVESVQT------GPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGP 425 + +SV+T GP WRVGDDVAH +LGHGWVQGAGHGV+T RFETR SGP Sbjct: 364 S----QSVETAAEAMFGPGH-DAGWRVGDDVAHPDLGHGWVQGAGHGVVTARFETRTSGP 418 Query: 426 GPARTFPEDSPEISRADPVDSLDWAEYLSSLADYQSTP 463 GPARTFP DS E+ RA+PVDSLDW +Y+ L + + P Sbjct: 419 GPARTFPADSAELVRANPVDSLDWPDYVEGLQESSAPP 456 >tr|A0QHM7|A0QHM7_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Mycobacterium avium] Length = 458 Score = 629 bits (1621), Expect = e-178 Identities = 326/456 (71%), Positives = 364/456 (79%), Gaps = 11/456 (2%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA+R Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQAKR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 LVG AVVLPPRG VYGVASRR DT+R+VVPV+EQLSFDE FGEP++LAGA A DVEAF Sbjct: 61 LVGVSAVVLPPRGVVYGVASRRVFDTIRAVVPVVEQLSFDEGFGEPAQLAGAPAEDVEAF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CE+LR +V E TGL+ASVGAGSGKQIAKIASGLAKPDG+RVVRR EE LL GLPVR+LW Sbjct: 121 CEQLRRRVREQTGLIASVGAGSGKQIAKIASGLAKPDGVRVVRRAEERELLGGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPVAERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGELAALTDAEAANILGATIGPALHRLARGIDDRPVAERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QIS+ESTF DLTTL QL++AI PI EHAH RL +DGRGARTVTVKLKKSDMSTLTRSAT Sbjct: 241 QISSESTFAADLTTLEQLREAIEPIAEHAHHRLLRDGRGARTVTVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 L YATTEA+ L+G ARRLLLDP EIGPIRL+GVGFSGLS++RQESLFPDLE P D+ Sbjct: 301 LPYATTEAAALVGVARRLLLDPREIGPIRLLGVGFSGLSEVRQESLFPDLEMPAPQSDS- 359 Query: 374 PQVESVQT------GPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGP 427 +SV+T GP WRVGDDVAH +LGHGWVQGAGHGV+T RFETR SGPGP Sbjct: 360 ---QSVETAAEAMFGPGH-DAGWRVGDDVAHPDLGHGWVQGAGHGVVTARFETRTSGPGP 415 Query: 428 ARTFPEDSPEISRADPVDSLDWAEYLSSLADYQSTP 463 ARTFP DS E+ RA+PVDSLDW +Y+ L + + P Sbjct: 416 ARTFPADSAELVRANPVDSLDWPDYVEGLQESSAPP 451 >tr|D5P2N3|D5P2N3_9MYCO Tax_Id=525368 (dinX)SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 529 Score = 621 bits (1601), Expect = e-176 Identities = 326/460 (70%), Positives = 362/460 (78%), Gaps = 9/460 (1%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 63 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQA 122 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYGVASRR DTVR+VVPV+EQLSFDE FGEP LAGA AA VE Sbjct: 123 RRLIGVTAVVLPPRGVVYGVASRRVFDTVRAVVPVVEQLSFDEGFGEPPHLAGASAAQVE 182 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 AFCE LR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVV R EE LL GLPVR+ Sbjct: 183 AFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVGRAEERSLLGGLPVRR 242 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++L+R+GIETIG N+LG+TIGPALHRLARGIDDRPVAERAE Sbjct: 243 LWGIGPVAEEKLNRLGIETIGQLAALTDAEAANILGATIGPALHRLARGIDDRPVAERAE 302 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQIS+ESTF DLTTL QL++AI PI EHAH+RL +DGRGARTVTVKLKKSDMSTLTRS Sbjct: 303 AKQISSESTFAVDLTTLEQLREAIDPIAEHAHQRLLRDGRGARTVTVKLKKSDMSTLTRS 362 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL YATTE L+ ARRLLLDP EIGPIRL+GVGFSGLSD+RQESLFPDLE E + Sbjct: 363 ATLPYATTEPGALVAVARRLLLDPREIGPIRLLGVGFSGLSDVRQESLFPDLEFAGETSE 422 Query: 372 AAPQVESVQTGPSSPTTQ----WRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGP 427 P VE+ +P + WRVGDDV H +LGHGWVQGAGHGV+TVRFETR+SGPGP Sbjct: 423 QHP-VEAAAEAMFAPVAEAGSPWRVGDDVTHPQLGHGWVQGAGHGVVTVRFETRSSGPGP 481 Query: 428 ARTFPEDSPEISRADPVDSLDWAEYLSSL----ADYQSTP 463 ARTFP + E+++A+PVDSLDW +YL +L AD S P Sbjct: 482 ARTFPAGTAELTQANPVDSLDWPDYLGALQALEADAPSAP 521 >tr|A4T9J7|A4T9J7_MYCGI Tax_Id=350054 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium gilvum] Length = 455 Score = 620 bits (1600), Expect = e-175 Identities = 318/447 (71%), Positives = 352/447 (78%), Gaps = 2/447 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYE+R +GARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYESRVFGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRLVGA AVVLPPRG VYG+ASRR +TVR+ VPVLEQLSFDEAFGEP LAGA A +V Sbjct: 64 RRLVGAGAVVLPPRGVVYGLASRRVFETVRARVPVLEQLSFDEAFGEPVALAGASAGEVA 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FC+ LRA+V TGLVASVGAGSGKQIAKIASGLAKPDG+ V+ +E LL LPVR+ Sbjct: 124 DFCQALRAEVTAVTGLVASVGAGSGKQIAKIASGLAKPDGVTVIAHADERALLDDLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GI+TIG N+LG T+GPALHRLARGIDDRPV E A Sbjct: 184 LWGIGPVAEEKLHRLGIDTIGGFAALADTEVANILGPTVGPALHRLARGIDDRPVTENAP 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTFPEDLTTL QL+DA PIGEHAHRRL KDGRGARTVTVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFPEDLTTLRQLRDAAAPIGEHAHRRLLKDGRGARTVTVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQ--PEEF 369 ATL YATT+A TLI TA RLLLDPV+IGPIRLVG+GFSGLSDI+QESLFP+LE EE Sbjct: 304 ATLPYATTDAGTLIATAHRLLLDPVDIGPIRLVGIGFSGLSDIQQESLFPELESATTEEL 363 Query: 370 PDAAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 P + + S WRVGDDV+HTE GHGWVQGAGHGVMTVRFETR +GPGPAR Sbjct: 364 TSLGPLSSPLSSAASHVEPAWRVGDDVSHTEFGHGWVQGAGHGVMTVRFETRGTGPGPAR 423 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSL 456 TF ED P +SRA+PVDSLDW +Y++ + Sbjct: 424 TFREDDPALSRANPVDSLDWPDYVAEM 450 >tr|B2HQ65|B2HQ65_MYCMM Tax_Id=216594 (dinP_1)SubName: Full=DNA polymerase IV, DinP_1;[Mycobacterium marinum] Length = 470 Score = 615 bits (1586), Expect = e-174 Identities = 314/448 (70%), Positives = 357/448 (79%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLMGRPVLVGGMGGRGVVAGASYEARVFGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRGAVYGVASRR DTVR +VPV+EQLSFDEAFGEP +L GA A+VE Sbjct: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCE LR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVV R+EE +LL GLPVR+ Sbjct: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIET+G N+LG+T+GPALHRLARGIDDRPVAERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTTL QL+DA+ PI EHAH+RL +DGRG+RTVTVKLKK+DMSTLTRS Sbjct: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL YATT+ L+ ARRLLLDPV+IGPIRL+GVGFSGLS++RQESLFPDL+ E + Sbjct: 304 ATLPYATTDVGALLALARRLLLDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 Query: 372 AAPQVESVQTGPSSPT---TQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPA 428 A Q G S T WR+GDDV H ELGHGWVQGAGHGV+TVRFETR SGPGPA Sbjct: 364 EAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPA 423 Query: 429 RTFPEDSPEISRADPVDSLDWAEYLSSL 456 RTFP ++ +I+ A+PVDSLDW +++ L Sbjct: 424 RTFPIETSDITAANPVDSLDWPDFVGQL 451 >tr|A0PNX8|A0PNX8_MYCUA Tax_Id=362242 (dinP_1)SubName: Full=DNA polymerase IV, DinP_1;[Mycobacterium ulcerans] Length = 473 Score = 610 bits (1574), Expect = e-172 Identities = 312/448 (69%), Positives = 356/448 (79%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 7 RWVLHLDMDAFFASVEQLTRPTLMGRPVLVGGMGGRGVVAGASYEARVFGARSAMPMHQA 66 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRGAVYGVASRR DTVR +VPV+EQLSFDEAFGEP +L GA A+VE Sbjct: 67 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 126 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCE LR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVV R+EE +LL GLPVR+ Sbjct: 127 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARKEEQLLLGGLPVRR 186 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIET+G N+LG+T+GPALHRLARGIDDRPVAERAE Sbjct: 187 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 246 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTTL QL+DA+ PI EHAH+RL +DGRG+RTVTVKLKK+DMSTLTRS Sbjct: 247 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 306 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL YATT+ L+ ARRLLLDP +IGPIRL+GVGFSGLS++RQESLFPDL+ E + Sbjct: 307 ATLPYATTDVGALLALARRLLLDPAQIGPIRLLGVGFSGLSELRQESLFPDLDLAAETSE 366 Query: 372 AAPQVESVQTGPSSPT---TQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPA 428 A + G S T WR+GDDV H ELGHGWVQGAGHGV+TVRFETR SGPGPA Sbjct: 367 EAHKDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRDSGPGPA 426 Query: 429 RTFPEDSPEISRADPVDSLDWAEYLSSL 456 RTFP ++ +I+ A+PVDSLDW +++ L Sbjct: 427 RTFPIETSDITAANPVDSLDWPDFVGQL 454 >sp|P63985|DPO41_MYCTU Tax_Id=1773 (dinB1)RecName: Full=DNA polymerase IV 1; Short=Pol IV 1; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 468 Score = 608 bits (1567), Expect = e-172 Identities = 315/448 (70%), Positives = 350/448 (78%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 64 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 124 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 304 ATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 362 Query: 372 AAPQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 AA VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG AR Sbjct: 363 AAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSAR 422 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSLA 457 TFP D+ +IS A P+DSLDW +Y+ L+ Sbjct: 423 TFPVDTGDISNASPLDSLDWPDYIGQLS 450 >sp|P63986|DPO41_MYCBO Tax_Id=1765 (dinB1)RecName: Full=DNA polymerase IV 1; Short=Pol IV 1; EC=2.7.7.7;[Mycobacterium bovis] Length = 468 Score = 608 bits (1567), Expect = e-172 Identities = 315/448 (70%), Positives = 350/448 (78%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 64 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 124 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 304 ATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 362 Query: 372 AAPQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 AA VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG AR Sbjct: 363 AAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSAR 422 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSLA 457 TFP D+ +IS A P+DSLDW +Y+ L+ Sbjct: 423 TFPVDTGDISNASPLDSLDWPDYIGQLS 450 >tr|D5YRH7|D5YRH7_MYCTU Tax_Id=515616 SubName: Full=DNA polymerase IV;[Mycobacterium tuberculosis 02_1987] Length = 468 Score = 608 bits (1567), Expect = e-172 Identities = 315/448 (70%), Positives = 350/448 (78%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 64 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 124 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 304 ATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 362 Query: 372 AAPQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 AA VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG AR Sbjct: 363 AAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSAR 422 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSLA 457 TFP D+ +IS A P+DSLDW +Y+ L+ Sbjct: 423 TFPVDTGDISNASPLDSLDWPDYIGQLS 450 >tr|A4KH83|A4KH83_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase IV dinX (Pol IV 1);[Mycobacterium tuberculosis str. Haarlem] Length = 468 Score = 608 bits (1567), Expect = e-172 Identities = 315/448 (70%), Positives = 350/448 (78%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 64 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 124 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 304 ATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 362 Query: 372 AAPQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 AA VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG AR Sbjct: 363 AAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSAR 422 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSLA 457 TFP D+ +IS A P+DSLDW +Y+ L+ Sbjct: 423 TFPVDTGDISNASPLDSLDWPDYIGQLS 450 >tr|A2VI54|A2VI54_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase IV dinX (Pol IV 1);[Mycobacterium tuberculosis C] Length = 468 Score = 608 bits (1567), Expect = e-172 Identities = 315/448 (70%), Positives = 350/448 (78%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 64 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 124 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 304 ATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 362 Query: 372 AAPQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 AA VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG AR Sbjct: 363 AAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSAR 422 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSLA 457 TFP D+ +IS A P+DSLDW +Y+ L+ Sbjct: 423 TFPVDTGDISNASPLDSLDWPDYIGQLS 450 >tr|C6DSQ5|C6DSQ5_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase IV dinX;[Mycobacterium tuberculosis] Length = 468 Score = 605 bits (1561), Expect = e-171 Identities = 314/448 (70%), Positives = 349/448 (77%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 64 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 124 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y T +A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 304 ATMPYPTPDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 362 Query: 372 AAPQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 AA VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG AR Sbjct: 363 AAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSAR 422 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSLA 457 TFP D+ +IS A P+DSLDW +Y+ L+ Sbjct: 423 TFPVDTGDISNASPLDSLDWPDYIGQLS 450 >tr|D6G8U7|D6G8U7_MYCTU Tax_Id=478435 SubName: Full=DNA polymerase IV dinX;[Mycobacterium tuberculosis KZN 605] Length = 468 Score = 605 bits (1561), Expect = e-171 Identities = 314/448 (70%), Positives = 349/448 (77%), Gaps = 3/448 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 63 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 64 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 123 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 124 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 183 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 184 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 243 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 244 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 303 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y T +A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 304 ATMPYPTPDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 362 Query: 372 AAPQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPAR 429 AA VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG AR Sbjct: 363 AAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSAR 422 Query: 430 TFPEDSPEISRADPVDSLDWAEYLSSLA 457 TFP D+ +IS A P+DSLDW +Y+ L+ Sbjct: 423 TFPVDTGDISNASPLDSLDWPDYIGQLS 450 >tr|C1ANH3|C1ANH3_MYCBT Tax_Id=561275 (dinX)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Mycobacterium bovis] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|A5U2P4|A5U2P4_MYCTA Tax_Id=419947 (dinX)SubName: Full=DNA polymerase IV DinX;[Mycobacterium tuberculosis] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|A1KIW7|A1KIW7_MYCBP Tax_Id=410289 (dinX)SubName: Full=Probable DNA polymerase IV dinX;[Mycobacterium bovis] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|D6FT75|D6FT75_MYCTU Tax_Id=611304 SubName: Full=DNA polymerase IV dinX;[Mycobacterium tuberculosis K85] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|D6FH49|D6FH49_MYCTU Tax_Id=611303 SubName: Full=DNA polymerase IV dinX;[Mycobacterium tuberculosis CPHL_A] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|D6F8Q1|D6F8Q1_MYCTU Tax_Id=611302 SubName: Full=DNA polymerase IV dinX;[Mycobacterium tuberculosis T46] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|D5ZFX4|D5ZFX4_MYCTU Tax_Id=537210 SubName: Full=DNA polymerase IV dinX;[Mycobacterium tuberculosis T17] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|D5YF45|D5YF45_MYCTU Tax_Id=520140 SubName: Full=DNA polymerase IV;[Mycobacterium tuberculosis EAS054] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|D5Y3J5|D5Y3J5_MYCTU Tax_Id=520141 SubName: Full=DNA polymerase IV;[Mycobacterium tuberculosis T85] Length = 463 Score = 600 bits (1548), Expect = e-169 Identities = 312/446 (69%), Positives = 348/446 (78%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|A5WMM4|A5WMM4_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase IV dinX (Pol IV 1);[Mycobacterium tuberculosis] Length = 463 Score = 598 bits (1542), Expect = e-169 Identities = 311/446 (69%), Positives = 347/446 (77%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y T +A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTPDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW +Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPDYIGQLS 445 >tr|D5Z431|D5Z431_MYCTU Tax_Id=537209 SubName: Full=DNA polymerase IV dinX (Pol IV 1);[Mycobacterium tuberculosis GM 1503] Length = 463 Score = 597 bits (1538), Expect = e-168 Identities = 311/446 (69%), Positives = 346/446 (77%), Gaps = 3/446 (0%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 L+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+LW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAA 373 + Y T +A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E AA Sbjct: 301 MPYPTPDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TAAA 359 Query: 374 PQVES--VQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPARTF 431 VE+ + T WRVGDDVAH ELGHGWVQGAGHGV+TVRFETR SGPG ARTF Sbjct: 360 HYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTF 419 Query: 432 PEDSPEISRADPVDSLDWAEYLSSLA 457 P D+ +IS A P+DSLDW Y+ L+ Sbjct: 420 PVDTGDISNASPLDSLDWPYYIGQLS 445 >tr|B1MC11|B1MC11_MYCA9 Tax_Id=561007 SubName: Full=DNA polymerase IV family;[Mycobacterium abscessus] Length = 459 Score = 587 bits (1512), Expect = e-165 Identities = 306/441 (69%), Positives = 339/441 (76%), Gaps = 2/441 (0%) Query: 9 ASRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPM 68 A+ RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPM Sbjct: 3 AAGRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGTGGRGVVAGASYEARVFGARSAMPM 62 Query: 69 HQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAA 128 HQARRLVG AVVLPPRG+VYGVASRR +TVRS++P+LEQLSFDEAFGEPSEL GA + Sbjct: 63 HQARRLVGINAVVLPPRGSVYGVASRRVFETVRSMIPILEQLSFDEAFGEPSELFGATTS 122 Query: 129 DVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLP 188 V + LR++VL TGL ASVGAGSGKQIAKIASGLAKPDG+R++ EEE LL LP Sbjct: 123 AVADYIHELRSRVLGETGLTASVGAGSGKQIAKIASGLAKPDGVRIIAPEEERTLLDELP 182 Query: 189 VRKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAE 248 VRKLWGIGPVAE+RL+R+GI TIG +VLG TIGPALH+LARG+DDRPVAE Sbjct: 183 VRKLWGIGPVAEERLNRLGINTIGQFAALQTSEAASVLGGTIGPALHQLARGVDDRPVAE 242 Query: 249 RAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTL 308 RAE KQISAESTFP+DLTTL QL+ AI PIG HAHRRL K GRG RTVTVKL++SDMS L Sbjct: 243 RAETKQISAESTFPDDLTTLDQLRQAIEPIGVHAHRRLIKHGRGVRTVTVKLRRSDMSIL 302 Query: 309 TRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEE 368 TRSATL YATTE + L+ ARRLLLDPVEIGPIRLVGVGFSG SD++Q SLFPDL+Q E Sbjct: 303 TRSATLPYATTERAVLMSAARRLLLDPVEIGPIRLVGVGFSGFSDVQQTSLFPDLDQAE- 361 Query: 369 FPDAAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPA 428 P A P+ T W VGDDV H E GHGW+QG GHGVMTVRFETR+SGPG A Sbjct: 362 -PVAESDEVPSTAEPTHSTAGWGVGDDVDHAEFGHGWIQGTGHGVMTVRFETRSSGPGIA 420 Query: 429 RTFPEDSPEISRADPVDSLDW 449 RTF D P I+RADPV SLDW Sbjct: 421 RTFAVDDPGIARADPVASLDW 441 >tr|D5USG4|D5USG4_TSUPA Tax_Id=521096 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 466 Score = 521 bits (1343), Expect = e-146 Identities = 282/456 (61%), Positives = 325/456 (71%), Gaps = 6/456 (1%) Query: 3 GTVARTASRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGA 62 G+ A AS RWVLH DMDAFFAS EQLTRPT SYEAR YGA Sbjct: 6 GSPASDASARWVLHFDMDAFFASCEQLTRPTLRGRPVLVGGLGGRGVVAGCSYEARVYGA 65 Query: 63 RSAMPMHQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSEL 122 RSAMPMHQARRLVGAPAVVLPPRGA+YG SRR TVR ++PV+E LSFDEAFGEP+EL Sbjct: 66 RSAMPMHQARRLVGAPAVVLPPRGALYGTVSRRVFATVRELIPVVETLSFDEAFGEPAEL 125 Query: 123 AGAEAADVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAV 182 AGA +A+V AF E LRA++ TGL+ASVGAG+GKQ AKIASGLAKPDG+ V+ + Sbjct: 126 AGASSAEVVAFAEELRARIRAATGLIASVGAGAGKQAAKIASGLAKPDGVSVIPPAAQET 185 Query: 183 LLHGLPVRKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGID 242 +L+ LPVRKLWGIGPVA +RL R+GIETIG +VLG T+GPALHRLARG D Sbjct: 186 VLYPLPVRKLWGIGPVAGERLSRLGIETIGQFAAMSEVEVVSVLGVTLGPALHRLARGQD 245 Query: 243 DRPVAERAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKK 302 DRP+ R AK ISAE T D+TT+ L+ I EHA RRL KDGRGARTV +KLK+ Sbjct: 246 DRPIETRTGAKSISAEHTLEVDVTTMNALRREIDRSAEHAVRRLRKDGRGARTVVLKLKR 305 Query: 303 SDMSTLTRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPD 362 SDMS LTRSATL ATT+A+ L TA+RL LDPVEIG +RLVGVGFSGLS + Q +LF D Sbjct: 306 SDMSILTRSATLPSATTDAAVLTATAQRLALDPVEIGGLRLVGVGFSGLSSVEQFTLFGD 365 Query: 363 LEQP--EEFPDAAPQVESVQT--GPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRF 418 E P E P A + V+T + P WR G DV H E GHGWVQGAGHGV++VRF Sbjct: 366 -EAPAAEAAPVVADGADVVETTDDAAEPVVGWRTGMDVRHPEFGHGWVQGAGHGVLSVRF 424 Query: 419 ETRASGPGPARTFPEDSPEISRADPVDSLDW-AEYL 453 ETR SGPG R+F D P++ ADP+DSLDW AE+L Sbjct: 425 ETRESGPGRMRSFRADDPDLREADPLDSLDWPAEHL 460 >tr|D5PP26|D5PP26_COREQ Tax_Id=525370 SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Rhodococcus equi ATCC 33707] Length = 449 Score = 519 bits (1337), Expect = e-145 Identities = 268/442 (60%), Positives = 327/442 (73%), Gaps = 2/442 (0%) Query: 8 TASRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMP 67 T SRRWVLHLDMDAFFASVEQLTRPT SYEAR +GA SAMP Sbjct: 7 TRSRRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGAHSAMP 66 Query: 68 MHQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEA 127 MHQARRLVG AVVLPPRG++YG SR+ D +R +PVLEQLS DEAFGEP+ELAG Sbjct: 67 MHQARRLVGPAAVVLPPRGSLYGHVSRQVFDALRVRMPVLEQLSMDEAFGEPAELAGVGK 126 Query: 128 ADVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGL 187 A+VE +CE LRA VL TGLVAS+GAG+GKQ+AKIASGLAKP+G+ VV + + L+ L Sbjct: 127 AEVERYCEELRALVLAETGLVASIGAGAGKQVAKIASGLAKPNGVTVVSPDVQQQLMSAL 186 Query: 188 PVRKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVA 247 PVRKLWG+GPVAE++L R+GI+TIG +VLG TIGP+LHRLARGIDDRPVA Sbjct: 187 PVRKLWGVGPVAEEKLKRLGIDTIGALAALPDAEVVSVLGGTIGPSLHRLARGIDDRPVA 246 Query: 248 ERAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMST 307 ERA+AKQ+SAE+T+ ED+ TLA L+ A+ AHRRL++DGR ARTV +KL+KSDMS Sbjct: 247 ERADAKQVSAETTYAEDIVTLAGLRRAVDASAAAAHRRLDRDGRAARTVVLKLRKSDMSI 306 Query: 308 LTRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQ-- 365 +TRS TL YATT+ L TA+R ++DP+E+GPIRLVGVGF GLS + Q SLFP+L+Q Sbjct: 307 VTRSLTLPYATTDLQILTATAQRQVIDPLELGPIRLVGVGFGGLSAVSQGSLFPELDQAV 366 Query: 366 PEEFPDAAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGP 425 P E A + +++ S T +WR G DV+H E GHGWVQGAGHGV+TVRFETR++G Sbjct: 367 PAEDDVAEAEGDAIAEDGSDTTVRWRPGMDVSHPEYGHGWVQGAGHGVVTVRFETRSTGR 426 Query: 426 GPARTFPEDSPEISRADPVDSL 447 GP+RTF + ++ AD +DSL Sbjct: 427 GPSRTFDDTDCDLVVADVIDSL 448 >tr|Q5YYW6|Q5YYW6_NOCFA Tax_Id=37329 SubName: Full=Putative DNA polymerase IV family protein;[Nocardia farcinica] Length = 463 Score = 517 bits (1331), Expect = e-144 Identities = 275/444 (61%), Positives = 319/444 (71%), Gaps = 8/444 (1%) Query: 10 SRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMH 69 +RRWVLH+DMDAFFASVEQLTRPT SYEAR YGARSAMPMH Sbjct: 21 ARRWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGTGARGVVAGASYEARVYGARSAMPMH 80 Query: 70 QARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAAD 129 QA+RLVG AVV+PPRGAVY S R + +RS +PVLE LSFDEAFGEP+ELAGA A Sbjct: 81 QAKRLVGVSAVVVPPRGAVYAEMSGRVFEALRSRIPVLETLSFDEAFGEPAELAGASVAR 140 Query: 130 VEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPV 189 V FC LRA V E TGLVASVGAG+GKQ+AKIASGLAKPDGIRVV E+ LL LPV Sbjct: 141 VHEFCAELRALVRERTGLVASVGAGTGKQLAKIASGLAKPDGIRVVSPAEQQRLLAALPV 200 Query: 190 RKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAER 249 R LWGIGPVAE RL +GIET+G ++LG +IG ALHRLARGIDDRPV ER Sbjct: 201 RTLWGIGPVAEGRLRTLGIETVGAFAALPESEAVSLLGGSIGAALHRLARGIDDRPVTER 260 Query: 250 AEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLT 309 AEAKQISAE+T+ D+ T+A L+ AI + AHRRL DGR ARTV +KLK+SDMS +T Sbjct: 261 AEAKQISAENTYETDIVTMAALRQAIDAMAAAAHRRLGNDGRAARTVVLKLKRSDMSIVT 320 Query: 310 RSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEF 369 RS+TL YATT+ + L A+R +DPVE+GPIRLVGVG++GLS +RQESLFP+L++ Sbjct: 321 RSSTLPYATTDLAALTAAAQRSAIDPVELGPIRLVGVGYAGLSAVRQESLFPELDRAPVD 380 Query: 370 PDAAPQVESVQTGPSSPTTQ------WRVGDDVAHTELGHGWVQGAGHGVMTVRFETRAS 423 DAA VE + +P W G DVAH E GHGWVQGAGHGV+TVRFET ++ Sbjct: 381 EDAA--VEPAEPAAPAPVADPAAVRIWYPGMDVAHPEYGHGWVQGAGHGVVTVRFETSST 438 Query: 424 GPGPARTFPEDSPEISRADPVDSL 447 GPGPARTF D +SRADP+ SL Sbjct: 439 GPGPARTFSADDISLSRADPLGSL 462 >tr|Q0SHT2|Q0SHT2_RHOSR Tax_Id=101510 SubName: Full=DNA polymerase IV;[Rhodococcus sp.] Length = 449 Score = 508 bits (1309), Expect = e-142 Identities = 263/448 (58%), Positives = 323/448 (72%), Gaps = 9/448 (2%) Query: 10 SRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMH 69 SRRWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMH Sbjct: 2 SRRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMH 61 Query: 70 QARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAAD 129 QARRLVG AVVLPPRG +YG+ S+ D +R +PVLEQLS DEAFGEP ELAGA+A Sbjct: 62 QARRLVGPGAVVLPPRGRLYGMLSKSVFDALRGPMPVLEQLSMDEAFGEPIELAGADAGT 121 Query: 130 VEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPV 189 V+ +CE LRA VLE TGLVAS+GAGSGKQ+AKIASGLAKP+GI V+ +E+ +L LPV Sbjct: 122 VQRYCEGLRALVLEETGLVASIGAGSGKQVAKIASGLAKPNGITVIPPDEQHAVLDELPV 181 Query: 190 RKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAER 249 RKLWGIGPVAE++L R+GIETIG ++LG+T+GP LHRLA+GID+RPVAER Sbjct: 182 RKLWGIGPVAEEKLKRLGIETIGGFARTPESEVASILGTTVGPGLHRLAQGIDNRPVAER 241 Query: 250 AEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLT 309 AE+KQ+SAE+TF D+ T+A+L+ A+ A RL+KDGR ARTV +KLKK+DMS +T Sbjct: 242 AESKQVSAETTFATDIVTMAELRGAVESSAASAFVRLQKDGRAARTVVLKLKKADMSVVT 301 Query: 310 RSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLE-QPEE 368 RS TL YAT + L+ A+R ++DP+E+GP+RLVGVGF+GLS +RQ SLFP+L+ Sbjct: 302 RSVTLPYATLDRQILVAAAQRQVIDPLELGPVRLVGVGFAGLSTVRQGSLFPELDLDVPG 361 Query: 369 FPDAAPQVESVQTGPSSPT--------TQWRVGDDVAHTELGHGWVQGAGHGVMTVRFET 420 + ++ V G S+P T+W G DV H + GHGWVQGAGHGV+TVRFET Sbjct: 362 YQESKITVAGADDGLSAPVPAPARAIDTRWHPGLDVTHPDFGHGWVQGAGHGVVTVRFET 421 Query: 421 RASGPGPARTFPEDSPEISRADPVDSLD 448 R +GPG ARTF D ++ RAD SL+ Sbjct: 422 RTTGPGKARTFKVDDAQLERADVEGSLE 449 >tr|C1AU44|C1AU44_RHOOB Tax_Id=632772 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Rhodococcus opacus] Length = 449 Score = 508 bits (1309), Expect = e-142 Identities = 264/447 (59%), Positives = 322/447 (72%), Gaps = 9/447 (2%) Query: 10 SRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMH 69 SRRWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMH Sbjct: 2 SRRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMH 61 Query: 70 QARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAAD 129 QARRLVG AVVLPPRG +YG+ S+ D +R +PVLEQLS DEAFGEP+ELAGA+AA Sbjct: 62 QARRLVGPGAVVLPPRGRLYGMLSKSVFDALRGPMPVLEQLSMDEAFGEPTELAGADAAA 121 Query: 130 VEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPV 189 V+ +CE LRA VLE TGLVAS+GAGSGKQ+AKIASGLAKPDGI V+ +E+ +L LPV Sbjct: 122 VQRYCEGLRALVLEETGLVASIGAGSGKQVAKIASGLAKPDGITVISPDEQHAVLDELPV 181 Query: 190 RKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAER 249 RKLWGIGPVAE++L R+GIETIG ++LG+TIGP LHRLA+G+D+RPVAER Sbjct: 182 RKLWGIGPVAEEKLKRLGIETIGGFARTPESEVASILGTTIGPGLHRLAQGVDNRPVAER 241 Query: 250 AEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLT 309 AE+KQ+SAE+TF D+ T+A+L+ A+ A RL+KDGR ARTV +KLKK+DMS +T Sbjct: 242 AESKQVSAETTFATDIVTMAELRGAVEASAASAFVRLQKDGRAARTVVLKLKKADMSIVT 301 Query: 310 RSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLE----- 364 RS TL YAT + L+ A+R ++DP+E+GP+RLVGVGF+GLS +RQ SLFP+L+ Sbjct: 302 RSVTLPYATLDRQILVAAAQRQVIDPIELGPVRLVGVGFAGLSTVRQGSLFPELDLDVPG 361 Query: 365 -QPEEFPDAAPQ---VESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFET 420 Q + +A V + T+W G DV H + GHGWVQGAGHGV+TVRFET Sbjct: 362 YQESKITEAGGDDGLAVPVPAPARAIDTRWHPGLDVTHPDFGHGWVQGAGHGVVTVRFET 421 Query: 421 RASGPGPARTFPEDSPEISRADPVDSL 447 R +GPG ARTF ED ++ AD SL Sbjct: 422 RTTGPGKARTFKEDDGQLDTADVEGSL 448 >tr|C1A0W3|C1A0W3_RHOE4 Tax_Id=234621 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 454 Score = 503 bits (1294), Expect = e-140 Identities = 268/447 (59%), Positives = 315/447 (70%), Gaps = 7/447 (1%) Query: 8 TASRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMP 67 T SRRWVLHLDMDAFFAS EQLTRPT SYEAR +GARSAMP Sbjct: 7 TRSRRWVLHLDMDAFFASAEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMP 66 Query: 68 MHQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEA 127 MHQARR+VG AVVLPPR ++Y V S+R D +R +P+LEQLS DEAFGEP ELAG A Sbjct: 67 MHQARRMVGGGAVVLPPRMSLYSVLSKRTFDALRLRMPILEQLSVDEAFGEPVELAGVGA 126 Query: 128 ADVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGL 187 +V AFCE LRA + TGLVAS+GAG+GKQ+AKIASGLAKPDG+ V+ + LL L Sbjct: 127 DEVRAFCEDLRALIKAETGLVASIGAGAGKQVAKIASGLAKPDGVAVIPPGMQHELLDPL 186 Query: 188 PVRKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVA 247 PVRKLWGIGPVAE++L R+GIETIG ++LG+T+GP LHRLA+GIDDRPVA Sbjct: 187 PVRKLWGIGPVAEEKLKRLGIETIGGFARTPIAEVASILGTTVGPGLHRLAQGIDDRPVA 246 Query: 248 ERAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMST 307 ERAE+KQISAESTF D+ T+AQL+ A+ G A RLEKDGR ARTV +KLKKSDMS Sbjct: 247 ERAESKQISAESTFAADIVTMAQLRAAVESSGRAAFSRLEKDGRAARTVVLKLKKSDMSI 306 Query: 308 LTRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQP- 366 LTRS TL +AT + L+ TA++ ++DP E+GPIRLVGVGF+GLS +RQ SLFP+L+Q Sbjct: 307 LTRSVTLPFATIDRQILVATAQKQVIDPQELGPIRLVGVGFAGLSTVRQGSLFPELDQDV 366 Query: 367 -----EEFPDAAPQVE-SVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFET 420 E A + E V P W G DV H E GHGWVQGAGHGV+TVRFET Sbjct: 367 PGYPVETLTGALDEAELDVPVAARVPQRYWHPGLDVKHPEYGHGWVQGAGHGVVTVRFET 426 Query: 421 RASGPGPARTFPEDSPEISRADPVDSL 447 R+SG G A+TF E + AD VDSL Sbjct: 427 RSSGTGIAKTFAESDEVLEVADAVDSL 453 >tr|D5XTI0|D5XTI0_MYCTU Tax_Id=515617 SubName: Full=DNA polymerase IV;[Mycobacterium tuberculosis T92] Length = 404 Score = 501 bits (1291), Expect = e-140 Identities = 266/382 (69%), Positives = 294/382 (76%), Gaps = 3/382 (0%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLHLDMDAFFASVEQLTRPT SYEAR YGARSAMPMHQA Sbjct: 21 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQA 80 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RRL+G AVVLPPRG VYG+ASRR DTVR +VPV+EQLSFDEAF EP +LAGA A DVE Sbjct: 81 RRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVE 140 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 FCERLR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVVR EE LL GLPVR+ Sbjct: 141 TFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRR 200 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWGIGPVAE++LHR+GIETIG N+LG+TIGPALHRLARGIDDRPV ERAE Sbjct: 201 LWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAE 260 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQISAESTF DLTT+ QL +AI I EHAH+RL +DGRGART+TVKLKKSDMSTLTRS Sbjct: 261 AKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRS 320 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 AT+ Y TT+A L ARRLL DP++IGPIRL+GVGFSGLSDIRQESLF D + +E Sbjct: 321 ATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE-TA 379 Query: 372 AAPQVES--VQTGPSSPTTQWR 391 AA VE+ + T WR Sbjct: 380 AAHYVETPGAVVPAAHDATMWR 401 >tr|C3JJ35|C3JJ35_RHOER Tax_Id=596309 SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Rhodococcus erythropolis SK121] Length = 442 Score = 491 bits (1264), Expect = e-137 Identities = 263/441 (59%), Positives = 310/441 (70%), Gaps = 7/441 (1%) Query: 14 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARR 73 +LHLDMDAFFAS EQLTRPT SYEAR +GARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASAEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQARR 60 Query: 74 LVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAF 133 +VGA AVVLPPR ++Y V S+R D +R +P+LEQLS DEAFGEP ELAG A +V AF Sbjct: 61 MVGASAVVLPPRMSLYSVLSKRTFDALRLRMPILEQLSVDEAFGEPVELAGVGADEVRAF 120 Query: 134 CERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLW 193 CE LRA + TGLVAS+GAG+GKQ+AKIASGLAKPDG+ V+ + LL LPVRKLW Sbjct: 121 CEDLRALIKAETGLVASIGAGAGKQVAKIASGLAKPDGVAVIPPGMQHELLDPLPVRKLW 180 Query: 194 GIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAK 253 GIGPVAE++L R+GIETIG ++LG+T+GP LHRLA+GIDDRPVAERAE+K Sbjct: 181 GIGPVAEEKLKRLGIETIGGFARTPIAEVASILGTTVGPGLHRLAQGIDDRPVAERAESK 240 Query: 254 QISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSAT 313 QISAESTF D+ T+AQL+ A+ G A RLEKDGR ARTV +KLKKSDMS LTRS T Sbjct: 241 QISAESTFAADIVTMAQLRAAVESSGRAAFSRLEKDGRAARTVVLKLKKSDMSILTRSVT 300 Query: 314 LAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQP------E 367 L +AT + LI TA++ ++DP E+GPIRLVGVGF+GLS +RQ SLFP+L+Q E Sbjct: 301 LPFATIDRQILIATAQKQVIDPQELGPIRLVGVGFAGLSTVRQGSLFPELDQDVPGYPVE 360 Query: 368 EFPDAAPQVE-SVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPG 426 A + E P W G DV H E GHGWVQGAGHGV+TVRFETR+SG G Sbjct: 361 TLTGALDEAELDAPVAARVPQRYWHPGLDVKHPEYGHGWVQGAGHGVVTVRFETRSSGTG 420 Query: 427 PARTFPEDSPEISRADPVDSL 447 A+TF E + AD VDSL Sbjct: 421 IAKTFAESDEVLEVADAVDSL 441 >tr|D0LAR7|D0LAR7_GORB4 Tax_Id=526226 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Gordonia bronchialis] Length = 449 Score = 471 bits (1211), Expect = e-130 Identities = 257/445 (57%), Positives = 300/445 (67%), Gaps = 15/445 (3%) Query: 15 LHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQARRL 74 +HLDMDAFFASVEQLTRPT SYEAR +GA SAMPMHQARRL Sbjct: 1 MHLDMDAFFASVEQLTRPTLRGRPVLVGGTGGRGVVAGASYEARAFGAGSAMPMHQARRL 60 Query: 75 VGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVEAFC 134 VG AVV+PPRG+VY V S R VR VPV+E LSFDEAF EP+ELAGA A+ F Sbjct: 61 VGPTAVVVPPRGSVYRVVSSRIFALVRRAVPVIEMLSFDEAFAEPAELAGAPASAAADFA 120 Query: 135 ERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRKLWG 194 ER+R + + GL ASVG GSGKQIAKIASG AKPDG+ V+ E LH LPVRKLWG Sbjct: 121 ERIRGIIRDEVGLAASVGFGSGKQIAKIASGQAKPDGVMVIPPSAELAFLHELPVRKLWG 180 Query: 195 IGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAEAKQ 254 IGPV+ D+L R+GI+TIG +VLG+T+GPALHRLA+GID+RPV ERA AKQ Sbjct: 181 IGPVSGDKLSRLGIDTIGDLAAMAPVEVSSVLGATVGPALHRLAQGIDERPVTERASAKQ 240 Query: 255 ISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRSATL 314 ISAESTF D+ L +L+ AI AHRRL DGRGARTV VKLK+SDMS LTRSATL Sbjct: 241 ISAESTFAADIVDLPELRQAIDKAAADAHRRLLADGRGARTVVVKLKRSDMSVLTRSATL 300 Query: 315 AYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPDAAP 374 ATT+ L A+RL LDP IGPIRLVGVG+SGLS ++Q +LF D DA Sbjct: 301 PTATTDLDELDRAAQRLALDPRSIGPIRLVGVGYSGLSSVQQYALFGD-----PVDDAIA 355 Query: 375 QVESVQTGPSS----------PTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASG 424 Q V + +S +++ G DV H E GHGWVQG+GHGV+TVRFETR +G Sbjct: 356 QSAVVSSRDTSAPDDAVAEDVSSSRLVAGRDVRHPEFGHGWVQGSGHGVVTVRFETRTTG 415 Query: 425 PGPARTFPEDSPEISRADPVDSLDW 449 PG RTF D P ++ ADP+DSL+W Sbjct: 416 PGRTRTFAVDDPLLTLADPLDSLEW 440 >tr|C0XS17|C0XS17_9CORY Tax_Id=525263 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium lipophiloflavum DSM 44291] Length = 455 Score = 446 bits (1146), Expect = e-123 Identities = 236/450 (52%), Positives = 292/450 (64%), Gaps = 8/450 (1%) Query: 12 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQA 71 RWVLH+DMDAF+AS EQLTRPT SYEAR+YGARSAMP H+A Sbjct: 3 RWVLHIDMDAFYASCEQLTRPTLKGRPVLVAGVSGRGVVAGASYEARKYGARSAMPTHRA 62 Query: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 RLVG V++ PR AVY ASRR + + V V+EQLS DEAF EP+ELAGA +V Sbjct: 63 ARLVGPKVVLVAPRRAVYSTASRRVFEVIARHVAVVEQLSIDEAFMEPAELAGASPEEVR 122 Query: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 A+ + LRA + E TGL +S+GAGSGKQ AKI SGLAKPDG+ V+ R E+ +LH LPV + Sbjct: 123 AWADTLRATIKEETGLPSSIGAGSGKQYAKIGSGLAKPDGVFVIPRAEQLEILHPLPVSQ 182 Query: 192 LWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERAE 251 LWG+GPV E +L +GIETIG LG + L LARGID+R VA RAE Sbjct: 183 LWGVGPVTEAKLASVGIETIGDFAALSEREVEIALGGAVAKHLWALARGIDNREVAPRAE 242 Query: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 AKQIS+E T+P+DLTT Q+ +A+ +HRRL DGRGARTV+VKL+ +D TRS Sbjct: 243 AKQISSEHTYPQDLTTAPQVNEALTRAAAESHRRLLHDGRGARTVSVKLRMADFRVETRS 302 Query: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 ATL YAT +A TL TA +L+ P E+GPIRLVGV +SGL D Q+ LFP+L+Q Sbjct: 303 ATLPYATDDAETLAATAFKLVRYPDEVGPIRLVGVSYSGLEDALQDVLFPELDQVNSAGS 362 Query: 372 AAPQVESVQTGPSSPT--------TQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRAS 423 + +E + + P + WR DV H E GHGW+QG GHG +TVRFETRA+ Sbjct: 363 VSSDIEVGVSDHAEPVHVEITDAPSGWRATQDVYHPEYGHGWIQGTGHGWVTVRFETRAT 422 Query: 424 GPGPARTFPEDSPEISRADPVDSLDWAEYL 453 GPG RT D ++S ADPVDSL W ++L Sbjct: 423 GPGRTRTLRVDDADLSAADPVDSLAWEDWL 452 >tr|C6RAV1|C6RAV1_9CORY Tax_Id=553206 SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium tuberculostearicum SK141] Length = 462 Score = 431 bits (1109), Expect = e-119 Identities = 237/461 (51%), Positives = 291/461 (63%), Gaps = 18/461 (3%) Query: 11 RRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQ 70 +RWVLH+DMDAFFASVEQLTRPT SYEAR YGA SAMPM++ Sbjct: 2 QRWVLHIDMDAFFASVEQLTRPTLQGRPVLVGGTSGRGVVAGASYEARVYGAHSAMPMYR 61 Query: 71 ARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADV 130 A++LVG AVV+ PR AVY ASRR + V V+EQLS DEAF EP+ L GA A +V Sbjct: 62 AQQLVGLRAVVVQPRRAVYSAASRRVFGIIAQHVEVIEQLSIDEAFMEPAALEGASAEEV 121 Query: 131 EAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVR 190 + + + LRA + E TGL S+GAGSGKQ AKI SG AKPDG V+ E + +LH L V Sbjct: 122 KRWADELRALIREETGLPCSIGAGSGKQFAKIGSGEAKPDGTFVIPAERQLDMLHPLAVN 181 Query: 191 KLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERA 250 KLWG+GPV +L IG+ETIG +GS +G L +LARGIDDR VA RA Sbjct: 182 KLWGVGPVTGAKLKSIGVETIGQLAAMTRKEVEISIGSVVGLQLWQLARGIDDREVAPRA 241 Query: 251 EAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTR 310 +KQIS E T+P+DL T ++ AI E AHRRL KDGRGARTVTVKL+ +D +R Sbjct: 242 ISKQISTEHTYPKDLQTAPEVDAAIARAAEGAHRRLLKDGRGARTVTVKLRMADFHIESR 301 Query: 311 SATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFP 370 S TL YAT +A+ L A +L P E+GPIRLVGV +SGL RQ+ LFP+L++ E Sbjct: 302 STTLPYATDDAAVLTAAAFKLARYPDELGPIRLVGVSYSGLEAARQDVLFPELDR--EIV 359 Query: 371 DAAPQVESVQTGPSSPTT----------------QWRVGDDVAHTELGHGWVQGAGHGVM 414 AP +TG S T QW DV H E GHGW+QGAGHGV+ Sbjct: 360 RPAPADTDYETGVSDDATPAIPAPTVTVEEETDNQWHATQDVFHPEYGHGWIQGAGHGVV 419 Query: 415 TVRFETRASGPGPARTFPEDSPEISRADPVDSLDWAEYLSS 455 +VRFETRA+GPG ++F D P + ADP+DSLDW ++L+S Sbjct: 420 SVRFETRATGPGRTKSFAADDPALVPADPLDSLDWQDWLTS 460 >sp|A4QFK8|DPO4_CORGB Tax_Id=340322 (dinB)RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7;[Corynebacterium glutamicum] Length = 467 Score = 430 bits (1106), Expect = e-118 Identities = 240/458 (52%), Positives = 297/458 (64%), Gaps = 15/458 (3%) Query: 11 RRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQ 70 +RWVLH+DMDAFFAS EQLTRPT SYEAR++GARSAMPMHQ Sbjct: 2 QRWVLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARKFGARSAMPMHQ 61 Query: 71 ARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADV 130 A+ VG AVV+ PR VY ASRR V ++E+LS DE F EP L GA +V Sbjct: 62 AKARVGFGAVVVTPRHIVYSAASRRVFQIVEKRAGIVERLSIDEGFMEPEALVGATPEEV 121 Query: 131 EAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVR 190 + + E LRA++ E TGL +SVGAGSGKQIAKI SG AKPDG+ VV +++ LL LPV Sbjct: 122 KQWAEELRAEIKEVTGLPSSVGAGSGKQIAKIGSGEAKPDGVFVVPVDKQHDLLDPLPVG 181 Query: 191 KLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERA 250 LWG+GPV +L +G+ETIG LG+TIG +L LARGIDDRPV RA Sbjct: 182 ALWGVGPVTGSKLASMGVETIGDLAALTQKEVEISLGATIGISLWNLARGIDDRPVEPRA 241 Query: 251 EAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTR 310 EAKQIS E T+ +DL T Q+ AI+ E AHRRL KDGRGARTV+VKL+ +D +R Sbjct: 242 EAKQISQEHTYEKDLLTRQQVDAAIIRSAEGAHRRLLKDGRGARTVSVKLRMADFRIESR 301 Query: 311 SATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFP 370 S TL+YAT + +TL TA RL P E+GPIRLVGV FSGL + RQ+ LFP+L+Q P Sbjct: 302 SYTLSYATDDYATLEATAFRLARYPGEVGPIRLVGVSFSGLEESRQDILFPELDQQIIVP 361 Query: 371 DAAPQVE---SVQTGPSSPTTQ-----------WRVGDDVAHTELGHGWVQGAGHGVMTV 416 AP + VQ+ SS +TQ WR DV H E GHGWVQGAGHGV++V Sbjct: 362 -PAPDTDYEVGVQSSSSSESTQVEAPQDVALSMWRATQDVYHPEYGHGWVQGAGHGVVSV 420 Query: 417 RFETRASGPGPARTFPEDSPEISRADPVDSLDWAEYLS 454 RFETR++ G ++F D P+++ ADP+DSLDWA++ + Sbjct: 421 RFETRSTTKGRTKSFSMDDPDLTPADPLDSLDWADWFA 458 >tr|D5NU11|D5NU11_CORAM Tax_Id=649754 SubName: Full=ATP-NAD kinase;[Corynebacterium ammoniagenes DSM 20306] Length = 444 Score = 429 bits (1102), Expect = e-118 Identities = 228/443 (51%), Positives = 289/443 (65%), Gaps = 13/443 (2%) Query: 11 RRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQ 70 +RWVLH+DMDAFFAS EQLTRPT SYEAR+YGA SAMPM++ Sbjct: 2 QRWVLHIDMDAFFASCEQLTRPTLMGRPVLVGGMSGRGVVAGASYEARKYGAHSAMPMYR 61 Query: 71 ARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADV 130 A++LVG AVV+ PR VY +AS+R + S V ++EQLS DEA+ EP+EL GA +V Sbjct: 62 AQQLVGPKAVVVRPRFEVYRLASQRVFHYIESHVELVEQLSIDEAYMEPAELVGASPEEV 121 Query: 131 EAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVR 190 EA+ LRA + E GL AS+GAGSGKQ AKI SG AKPDG ++ +++ +LH L V Sbjct: 122 EAWAHELRAAIREDVGLPASIGAGSGKQFAKIGSGQAKPDGAFIIPADKQEEMLHPLDVD 181 Query: 191 KLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERA 250 +LWG+GPV +LH IG+ TIG +LGSTIGP+L +ARG+DDRPVA RA Sbjct: 182 ELWGVGPVTATKLHSIGVNTIGDLARLSQREVEIILGSTIGPSLWAMARGVDDRPVAPRA 241 Query: 251 EAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTR 310 E+K +SAE T+PEDLT+ ++ A+ AHRRL KDGRGARTVTVK++ +D + TR Sbjct: 242 ESKSVSAEHTYPEDLTSKDEVDRALERALTGAHRRLLKDGRGARTVTVKMRMADFHSETR 301 Query: 311 SATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFP 370 S TLAYAT + +TL L P E+GPIRLVGVGFSGL RQ+ LFP+L+Q Sbjct: 302 SLTLAYATDDIATLRKAMHSLARYPAELGPIRLVGVGFSGLEAERQDVLFPELDQ----- 356 Query: 371 DAAPQVESVQTGPSSPTT----QWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPG 426 + S +T TT W DV H E GHGW+QG GHG ++VRFETRA+GPG Sbjct: 357 ----AMVSTETRFDEETTVADRTWHATQDVFHPEYGHGWIQGTGHGFVSVRFETRATGPG 412 Query: 427 PARTFPEDSPEISRADPVDSLDW 449 P ++F D ++ ADP+DSL W Sbjct: 413 PFKSFAADDDKLQPADPIDSLAW 435 >tr|C2BNK8|C2BNK8_9CORY Tax_Id=525264 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium pseudogenitalium ATCC 33035] Length = 462 Score = 429 bits (1102), Expect = e-118 Identities = 235/461 (50%), Positives = 291/461 (63%), Gaps = 18/461 (3%) Query: 11 RRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMPMHQ 70 +RWVLH+DMDAFFASVEQLTRPT SYEAR YGA SAMPM++ Sbjct: 2 QRWVLHIDMDAFFASVEQLTRPTLQGRPVLVGGTSGRGVVAGASYEARVYGAHSAMPMYR 61 Query: 71 ARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADV 130 A++LVG AVV+ PR AVY ASRR + V V+EQLS DEAF EP+ L GA A +V Sbjct: 62 AQQLVGLRAVVVQPRRAVYSAASRRVFGIIAQHVEVIEQLSIDEAFMEPAALEGASAEEV 121 Query: 131 EAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVR 190 + + + LRA + E TGL S+GAGSGKQ AKI SG AKPDG V+ E + +LH L V Sbjct: 122 KRWADELRALIREETGLPCSIGAGSGKQFAKIGSGEAKPDGTFVIPAERQLDMLHPLAVN 181 Query: 191 KLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVAERA 250 KLWG+GPV +L IG+ETIG +GS +G L +LARGIDDR VA RA Sbjct: 182 KLWGVGPVTGAKLKSIGVETIGQLAAMTRKEVEISIGSVVGLQLWQLARGIDDREVAPRA 241 Query: 251 EAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTR 310 +KQIS E T+P+DL T ++ AI E AHRRL KDGRGARTVTVKL+ +D +R Sbjct: 242 ISKQISTEHTYPKDLQTAPEVDAAITRAAEGAHRRLLKDGRGARTVTVKLRMADFHIESR 301 Query: 311 SATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFP 370 S TL YAT +A+ L A +L P E+GPIRLVGV +SGL RQ+ LFP+L++ E Sbjct: 302 STTLPYATDDAAVLTAAAFKLARYPDELGPIRLVGVSYSGLETARQDVLFPELDR--EIV 359 Query: 371 DAAPQVESVQTGPSSPTT----------------QWRVGDDVAHTELGHGWVQGAGHGVM 414 AP +TG S T QW DV H + GHGW+QGAGHGV+ Sbjct: 360 RPAPADTDYETGVSDDATPAIPAPTVTVEEETDNQWHATQDVFHPDYGHGWIQGAGHGVV 419 Query: 415 TVRFETRASGPGPARTFPEDSPEISRADPVDSLDWAEYLSS 455 +VRFETRA+GPG ++F + P + ADP+DSLDW ++L+S Sbjct: 420 SVRFETRATGPGRTKSFAANDPALVPADPLDSLDWQDWLTS 460 >tr|C8NTM3|C8NTM3_9CORY Tax_Id=585529 (ppnK)SubName: Full=ATP-NAD kinase; EC=2.7.1.23;[Corynebacterium genitalium ATCC 33030] Length = 463 Score = 428 bits (1101), Expect = e-118 Identities = 231/454 (50%), Positives = 287/454 (63%), Gaps = 8/454 (1%) Query: 8 TASRRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARRYGARSAMP 67 T RWVLH+DMDAF+AS EQLTRPT SYEAR++GARSAMP Sbjct: 2 TEHSRWVLHIDMDAFYASCEQLTRPTLKGRPVLVAGVTGRGVVAGASYEARKFGARSAMP 61 Query: 68 MHQARRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEA 127 ++A RLVG AV++ PR VY ASRR + + V V+EQLS DEAF EP EL GA Sbjct: 62 TYRATRLVGPQAVLVTPRRKVYTTASRRVFEIIARHVDVVEQLSIDEAFMEPHELQGATP 121 Query: 128 ADVEAFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGL 187 +V + LR ++ E TGL +S+GAGSGKQ AKI SGLAKPDG ++ + ++ +LH L Sbjct: 122 DEVRDWANTLRDQIREETGLPSSIGAGSGKQYAKIGSGLAKPDGTYIIPKAQQTDILHPL 181 Query: 188 PVRKLWGIGPVAEDRLHRIGIETIGXXXXXXXXXXXNVLGSTIGPALHRLARGIDDRPVA 247 PV++LWG+GPV +L GIETIG LG +G L LARGIDDR V Sbjct: 182 PVKELWGVGPVTGAKLTGAGIETIGDFAAMTEREVDIALGGVVGKQLWMLARGIDDRDVK 241 Query: 248 ERAEAKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMST 307 RAE+KQISAE T+P+DLTT A+++ AI AHRRL DGRGART TVKLK +D Sbjct: 242 PRAESKQISAEHTYPQDLTTTAEVEAAIRRAASDAHRRLLIDGRGARTATVKLKMADFHI 301 Query: 308 LTRSATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQ-- 365 +RS TL YAT + TL+ A R+ P E+GPIRLVGVGFSGL D+ Q++LFP+L+Q Sbjct: 302 ESRSTTLPYATDDLETLVAAAFRIARYPDELGPIRLVGVGFSGLEDVMQDTLFPELDQAI 361 Query: 366 ------PEEFPDAAPQVESVQTGPSSPTTQWRVGDDVAHTELGHGWVQGAGHGVMTVRFE 419 PEE + + + T W DV H E GHGW+QGAGHG +TVRFE Sbjct: 362 IPHRVIPEETGVSDLADAPLPAFEEAAKTGWAATQDVFHPEYGHGWIQGAGHGFVTVRFE 421 Query: 420 TRASGPGPARTFPEDSPEISRADPVDSLDWAEYL 453 TRA+GPG + F D P++ ADPV+SL W E+L Sbjct: 422 TRATGPGKVKNFRADDPDLVPADPVNSLAWEEWL 455 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.316 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,490,145,234 Number of extensions: 139826899 Number of successful extensions: 391942 Number of sequences better than 10.0: 3814 Number of HSP's gapped: 385185 Number of HSP's successfully gapped: 3939 Length of query: 463 Length of database: 4,236,830,644 Length adjustment: 142 Effective length of query: 321 Effective length of database: 2,460,713,956 Effective search space: 789889179876 Effective search space used: 789889179876 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 83 (36.6 bits)