BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3178 (1184 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QX55|A0QX55_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 2244 0.0 tr|Q1B7E0|Q1B7E0_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 2111 0.0 tr|A3Q159|A3Q159_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 2111 0.0 tr|A1UHN3|A1UHN3_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 2111 0.0 tr|A1T8T4|A1T8T4_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 2074 0.0 tr|A4T9K1|A4T9K1_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 2068 0.0 tr|B2HQ75|B2HQ75_MYCMM Tax_Id=216594 (dnaE1)SubName: Full=DNA po... 2032 0.0 tr|A0PNY7|A0PNY7_MYCUA Tax_Id=362242 (dnaE1)SubName: Full=DNA po... 2031 0.0 tr|Q740T5|Q740T5_MYCPA Tax_Id=1770 (dnaE1)SubName: Full=DnaE1;[M... 2021 0.0 tr|A0QHL8|A0QHL8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 2018 0.0 tr|D5P2P4|D5P2P4_9MYCO Tax_Id=525368 (dnaE)SubName: Full=DNA-dir... 2013 0.0 sp|P63977|DPO3A_MYCTU Tax_Id=1773 (dnaE1)RecName: Full=DNA polym... 1961 0.0 sp|P63978|DPO3A_MYCBO Tax_Id=1765 (dnaE)RecName: Full=DNA polyme... 1961 0.0 tr|C6DSP5|C6DSP5_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 1961 0.0 tr|C1ANI3|C1ANI3_MYCBT Tax_Id=561275 (dnaE)SubName: Full=DNA pol... 1961 0.0 tr|A5WMN4|A5WMN4_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 1961 0.0 tr|A5U2Q4|A5U2Q4_MYCTA Tax_Id=419947 (dnaE1)SubName: Full=DNA po... 1961 0.0 tr|A1KIX8|A1KIX8_MYCBP Tax_Id=410289 (dnaE1)SubName: Full=Probab... 1961 0.0 tr|D6G8T7|D6G8T7_MYCTU Tax_Id=478435 SubName: Full=DNA polymeras... 1961 0.0 tr|D6FT85|D6FT85_MYCTU Tax_Id=611304 SubName: Full=DNA polymeras... 1961 0.0 tr|D6FH59|D6FH59_MYCTU Tax_Id=611303 SubName: Full=DNA polymeras... 1961 0.0 tr|D6F8R1|D6F8R1_MYCTU Tax_Id=611302 SubName: Full=DNA polymeras... 1961 0.0 tr|D5ZFY5|D5ZFY5_MYCTU Tax_Id=537210 SubName: Full=DNA polymeras... 1961 0.0 tr|D5Z441|D5Z441_MYCTU Tax_Id=537209 SubName: Full=DNA polymeras... 1961 0.0 tr|D5YF55|D5YF55_MYCTU Tax_Id=520140 SubName: Full=DNA polymeras... 1961 0.0 tr|D5Y3K5|D5Y3K5_MYCTU Tax_Id=520141 SubName: Full=DNA polymeras... 1961 0.0 tr|D5XTJ0|D5XTJ0_MYCTU Tax_Id=515617 SubName: Full=DNA polymeras... 1961 0.0 tr|A4KH92|A4KH92_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 1961 0.0 tr|A2VI63|A2VI63_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 1961 0.0 tr|D5YRI7|D5YRI7_MYCTU Tax_Id=515616 SubName: Full=DNA polymeras... 1961 0.0 tr|B1MC05|B1MC05_MYCA9 Tax_Id=561007 SubName: Full=DNA polymeras... 1957 0.0 sp|Q9X7F0|DPO3A_MYCLE Tax_Id=1769 (dnaE)RecName: Full=DNA polyme... 1926 0.0 tr|B8ZR78|B8ZR78_MYCLB Tax_Id=561304 (dnaE)SubName: Full=DNA pol... 1926 0.0 tr|Q5YYU5|Q5YYU5_NOCFA Tax_Id=37329 (dnaE)SubName: Full=Putative... 1864 0.0 tr|C1AU36|C1AU36_RHOOB Tax_Id=632772 (dnaE)SubName: Full=DNA pol... 1838 0.0 tr|Q0SHU0|Q0SHU0_RHOSR Tax_Id=101510 (dnaE1)SubName: Full=DNA-di... 1836 0.0 tr|D5PP16|D5PP16_COREQ Tax_Id=525370 (dnaE)SubName: Full=DNA-dir... 1821 0.0 tr|D0LAQ8|D0LAQ8_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 1777 0.0 tr|C3JJ26|C3JJ26_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 1777 0.0 tr|C1A0V4|C1A0V4_RHOE4 Tax_Id=234621 (dnaE)SubName: Full=DNA pol... 1775 0.0 tr|D5US18|D5US18_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 1750 0.0 tr|Q8FNW4|Q8FNW4_COREF Tax_Id=152794 SubName: Full=Putative DNA ... 1561 0.0 tr|C8NPY6|C8NPY6_COREF Tax_Id=196164 (dnaE)SubName: Full=DNA pol... 1561 0.0 tr|C7MYX4|C7MYX4_SACVD Tax_Id=471857 SubName: Full=DNA polymeras... 1541 0.0 tr|C8NTP1|C8NTP1_9CORY Tax_Id=585529 (dnaE)SubName: Full=DNA pol... 1540 0.0 >tr|A0QX55|A0QX55_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 1184 Score = 2244 bits (5814), Expect = 0.0 Identities = 1128/1184 (95%), Positives = 1128/1184 (95%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY Sbjct: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL Sbjct: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSSLASFEGQLGKWSRMD TTGCPSGEVQTRLRLGHEREALEA Sbjct: 121 RNLFKLSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHEREALEA 180 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH Sbjct: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD Sbjct: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF Sbjct: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP Sbjct: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 SAP GEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI Sbjct: 421 SAPDIDIDFDDRRRGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV Sbjct: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII Sbjct: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAIANIKANRGI AAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN Sbjct: 601 GDAIANIKANRGIDLDLETLPLDDPAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI Sbjct: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP Sbjct: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT Sbjct: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI Sbjct: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTG 960 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTG Sbjct: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTG 960 Query: 961 TDAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVA 1020 TDAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVA Sbjct: 961 TDAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVA 1020 Query: 1021 NDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXX 1080 NDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFG Sbjct: 1021 NDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGADIADDVVVL 1080 Query: 1081 XXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGT 1140 RIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGT Sbjct: 1081 VKAKVAARDDRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGT 1140 Query: 1141 SQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 SQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG Sbjct: 1141 SQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 >tr|Q1B7E0|Q1B7E0_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 1191 Score = 2111 bits (5469), Expect = 0.0 Identities = 1053/1190 (88%), Positives = 1094/1190 (91%), Gaps = 6/1190 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+DGRSSGSFVHLHNHTEYSMLDGAAK+ PMLAEAQRLEMPAIGMTDHGNMFGASEFY Sbjct: 1 MSGSDGRSSGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 N+AT AGIKPIIGIEAYIAP SRF+TKRV WGDP QK DDVSGSG+YTHMTMVAENATGL Sbjct: 61 NAATDAGIKPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGL 120 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSSLASFEGQLGKWSRMD TTGCPSGEVQTRLRLGH+REALEA Sbjct: 121 RNLFKLSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHQREALEA 180 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREIFGP+NFFLELMDHGLDIERRVREGLLEIG+KLGIPPLATNDCHYVTR+A++NH Sbjct: 181 AAKWREIFGPQNFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNH 240 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLC+QTGKTLSDPTRFKFDGDGY+LKSA EMRALWDSQVPGACDSTLLI ERVQSYAD Sbjct: 241 EALLCIQTGKTLSDPTRFKFDGDGYYLKSAAEMRALWDSQVPGACDSTLLIAERVQSYAD 300 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFR---GGPVPEEYTTRAEYEIKVICD 357 VW PRDRMP+FPVPEGHDQASWL HEV AGL+RRF GG VP +Y RAEYEIKVICD Sbjct: 301 VWAPRDRMPIFPVPEGHDQASWLHHEVMAGLKRRFSAVSGGVVPNDYIERAEYEIKVICD 360 Query: 358 KGFPSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP 417 KGFPSYFLIVADLINYA+SV IRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP Sbjct: 361 KGFPSYFLIVADLINYAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP 420 Query: 418 ERPSAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPG 477 ERPSAP GEMLRYAAN+WGS+RVAQVITFGTIKTKAALKDSARV++GQPG Sbjct: 421 ERPSAPDIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPG 480 Query: 478 FAIADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLE 537 FAIADRITKALPPPIMAKDIP+SGITDP HERYKEAAEVR LIDTDPDVRTIYETARGLE Sbjct: 481 FAIADRITKALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLE 540 Query: 538 GLVRNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNL 597 GLVRNAGVHACAVIMSSEPLIDAIPLW+RPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNL Sbjct: 541 GLVRNAGVHACAVIMSSEPLIDAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNL 600 Query: 598 TIIGDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPT 657 TIIGD I NIKANRG+ AYELL RGDTLGVFQLDGGPMRDLLRRMQPT Sbjct: 601 TIIGDCIENIKANRGVDLDLESLALDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPT 660 Query: 658 GFNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQ 717 FNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLK+ILAETYGLIVYQ Sbjct: 661 EFNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQ 720 Query: 718 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDT 777 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEY+GF+EGMTANGFSE AVKALWDT Sbjct: 721 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYQGFREGMTANGFSEAAVKALWDT 780 Query: 778 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL 837 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL Sbjct: 781 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL 840 Query: 838 GITVLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNK 897 GITVLPPDVNES NFASVGDDIRFGLGA+RNVGANVV+SL+ TR EKGK++DFSDYLNK Sbjct: 841 GITVLPPDVNESVQNFASVGDDIRFGLGAVRNVGANVVASLVNTRAEKGKYSDFSDYLNK 900 Query: 898 IDITACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE 957 IDI ACNKKVTESLIKAGAFDSLGHPRKGLFL+HTDAVDSVLGTKKAEAMGQFDLFG G+ Sbjct: 901 IDIAACNKKVTESLIKAGAFDSLGHPRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGSGD 960 Query: 958 DTGTDA---VFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI 1014 +G DA F+IKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI Sbjct: 961 GSGADAGDSAFSIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI 1020 Query: 1015 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXX 1074 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYS+FG Sbjct: 1021 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSVFGAEIA 1080 Query: 1075 XXXXXXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVL 1134 RIALIAHEL+VPDFSSAQADRPL+VSLPTRQCT+DKVTALKQVL Sbjct: 1081 DDVVVLVKAKVAARDDRIALIAHELVVPDFSSAQADRPLAVSLPTRQCTVDKVTALKQVL 1140 Query: 1135 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG Sbjct: 1141 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1190 >tr|A3Q159|A3Q159_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 1191 Score = 2111 bits (5469), Expect = 0.0 Identities = 1053/1190 (88%), Positives = 1094/1190 (91%), Gaps = 6/1190 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+DGRSSGSFVHLHNHTEYSMLDGAAK+ PMLAEAQRLEMPAIGMTDHGNMFGASEFY Sbjct: 1 MSGSDGRSSGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 N+AT AGIKPIIGIEAYIAP SRF+TKRV WGDP QK DDVSGSG+YTHMTMVAENATGL Sbjct: 61 NAATDAGIKPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGL 120 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSSLASFEGQLGKWSRMD TTGCPSGEVQTRLRLGH+REALEA Sbjct: 121 RNLFKLSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHQREALEA 180 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREIFGP+NFFLELMDHGLDIERRVREGLLEIG+KLGIPPLATNDCHYVTR+A++NH Sbjct: 181 AAKWREIFGPQNFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNH 240 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLC+QTGKTLSDPTRFKFDGDGY+LKSA EMRALWDSQVPGACDSTLLI ERVQSYAD Sbjct: 241 EALLCIQTGKTLSDPTRFKFDGDGYYLKSAAEMRALWDSQVPGACDSTLLIAERVQSYAD 300 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFR---GGPVPEEYTTRAEYEIKVICD 357 VW PRDRMP+FPVPEGHDQASWL HEV AGL+RRF GG VP +Y RAEYEIKVICD Sbjct: 301 VWAPRDRMPIFPVPEGHDQASWLHHEVMAGLKRRFSAVSGGVVPNDYIERAEYEIKVICD 360 Query: 358 KGFPSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP 417 KGFPSYFLIVADLINYA+SV IRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP Sbjct: 361 KGFPSYFLIVADLINYAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP 420 Query: 418 ERPSAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPG 477 ERPSAP GEMLRYAAN+WGS+RVAQVITFGTIKTKAALKDSARV++GQPG Sbjct: 421 ERPSAPDIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPG 480 Query: 478 FAIADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLE 537 FAIADRITKALPPPIMAKDIP+SGITDP HERYKEAAEVR LIDTDPDVRTIYETARGLE Sbjct: 481 FAIADRITKALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLE 540 Query: 538 GLVRNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNL 597 GLVRNAGVHACAVIMSSEPLIDAIPLW+RPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNL Sbjct: 541 GLVRNAGVHACAVIMSSEPLIDAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNL 600 Query: 598 TIIGDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPT 657 TIIGD I NIKANRG+ AYELL RGDTLGVFQLDGGPMRDLLRRMQPT Sbjct: 601 TIIGDCIENIKANRGVDLDLESLALDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPT 660 Query: 658 GFNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQ 717 FNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLK+ILAETYGLIVYQ Sbjct: 661 EFNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQ 720 Query: 718 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDT 777 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEY+GF+EGMTANGFSE AVKALWDT Sbjct: 721 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYQGFREGMTANGFSEAAVKALWDT 780 Query: 778 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL 837 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL Sbjct: 781 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL 840 Query: 838 GITVLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNK 897 GITVLPPDVNES NFASVGDDIRFGLGA+RNVGANVV+SL+ TR EKGK++DFSDYLNK Sbjct: 841 GITVLPPDVNESVQNFASVGDDIRFGLGAVRNVGANVVASLVNTRAEKGKYSDFSDYLNK 900 Query: 898 IDITACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE 957 IDI ACNKKVTESLIKAGAFDSLGHPRKGLFL+HTDAVDSVLGTKKAEAMGQFDLFG G+ Sbjct: 901 IDIAACNKKVTESLIKAGAFDSLGHPRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGSGD 960 Query: 958 DTGTDA---VFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI 1014 +G DA F+IKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI Sbjct: 961 GSGADAGDSAFSIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI 1020 Query: 1015 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXX 1074 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYS+FG Sbjct: 1021 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSVFGAEIA 1080 Query: 1075 XXXXXXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVL 1134 RIALIAHEL+VPDFSSAQADRPL+VSLPTRQCT+DKVTALKQVL Sbjct: 1081 DDVVVLVKAKVAARDDRIALIAHELVVPDFSSAQADRPLAVSLPTRQCTVDKVTALKQVL 1140 Query: 1135 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG Sbjct: 1141 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1190 >tr|A1UHN3|A1UHN3_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 1191 Score = 2111 bits (5469), Expect = 0.0 Identities = 1053/1190 (88%), Positives = 1094/1190 (91%), Gaps = 6/1190 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+DGRSSGSFVHLHNHTEYSMLDGAAK+ PMLAEAQRLEMPAIGMTDHGNMFGASEFY Sbjct: 1 MSGSDGRSSGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 N+AT AGIKPIIGIEAYIAP SRF+TKRV WGDP QK DDVSGSG+YTHMTMVAENATGL Sbjct: 61 NAATDAGIKPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGL 120 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSSLASFEGQLGKWSRMD TTGCPSGEVQTRLRLGH+REALEA Sbjct: 121 RNLFKLSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHQREALEA 180 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREIFGP+NFFLELMDHGLDIERRVREGLLEIG+KLGIPPLATNDCHYVTR+A++NH Sbjct: 181 AAKWREIFGPQNFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNH 240 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLC+QTGKTLSDPTRFKFDGDGY+LKSA EMRALWDSQVPGACDSTLLI ERVQSYAD Sbjct: 241 EALLCIQTGKTLSDPTRFKFDGDGYYLKSAAEMRALWDSQVPGACDSTLLIAERVQSYAD 300 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFR---GGPVPEEYTTRAEYEIKVICD 357 VW PRDRMP+FPVPEGHDQASWL HEV AGL+RRF GG VP +Y RAEYEIKVICD Sbjct: 301 VWAPRDRMPIFPVPEGHDQASWLHHEVMAGLKRRFSAVSGGVVPNDYIERAEYEIKVICD 360 Query: 358 KGFPSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP 417 KGFPSYFLIVADLINYA+SV IRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP Sbjct: 361 KGFPSYFLIVADLINYAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNP 420 Query: 418 ERPSAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPG 477 ERPSAP GEMLRYAAN+WGS+RVAQVITFGTIKTKAALKDSARV++GQPG Sbjct: 421 ERPSAPDIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPG 480 Query: 478 FAIADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLE 537 FAIADRITKALPPPIMAKDIP+SGITDP HERYKEAAEVR LIDTDPDVRTIYETARGLE Sbjct: 481 FAIADRITKALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLE 540 Query: 538 GLVRNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNL 597 GLVRNAGVHACAVIMSSEPLIDAIPLW+RPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNL Sbjct: 541 GLVRNAGVHACAVIMSSEPLIDAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNL 600 Query: 598 TIIGDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPT 657 TIIGD I NIKANRG+ AYELL RGDTLGVFQLDGGPMRDLLRRMQPT Sbjct: 601 TIIGDCIENIKANRGVDLDLESLALDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPT 660 Query: 658 GFNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQ 717 FNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLK+ILAETYGLIVYQ Sbjct: 661 EFNDIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQ 720 Query: 718 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDT 777 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEY+GF+EGMTANGFSE AVKALWDT Sbjct: 721 EQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYQGFREGMTANGFSEAAVKALWDT 780 Query: 778 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL 837 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL Sbjct: 781 ILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRL 840 Query: 838 GITVLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNK 897 GITVLPPDVNES NFASVGDDIRFGLGA+RNVGANVV+SL+ TR EKGK++DFSDYLNK Sbjct: 841 GITVLPPDVNESVQNFASVGDDIRFGLGAVRNVGANVVASLVNTRAEKGKYSDFSDYLNK 900 Query: 898 IDITACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE 957 IDI ACNKKVTESLIKAGAFDSLGHPRKGLFL+HTDAVDSVLGTKKAEAMGQFDLFG G+ Sbjct: 901 IDIAACNKKVTESLIKAGAFDSLGHPRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGSGD 960 Query: 958 DTGTDA---VFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI 1014 +G DA F+IKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI Sbjct: 961 GSGADAGDSAFSIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAI 1020 Query: 1015 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXX 1074 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYS+FG Sbjct: 1021 LDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSVFGAEIA 1080 Query: 1075 XXXXXXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVL 1134 RIALIAHEL+VPDFSSAQADRPL+VSLPTRQCT+DKVTALKQVL Sbjct: 1081 DDVVVLVKAKVAARDDRIALIAHELVVPDFSSAQADRPLAVSLPTRQCTVDKVTALKQVL 1140 Query: 1135 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG Sbjct: 1141 ANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1190 >tr|A1T8T4|A1T8T4_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 1182 Score = 2074 bits (5373), Expect = 0.0 Identities = 1033/1180 (87%), Positives = 1075/1180 (91%), Gaps = 4/1180 (0%) Query: 9 SGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGI 68 SGSFVHLHNHTEYSMLDGAAK+ PMLAEAQRLEMPAIGMTDHGNMFGASEFYN+AT AGI Sbjct: 2 SGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATDAGI 61 Query: 69 KPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSS 128 KPIIGIEAYIAP SRF+TKRV WGDP QK DDVSG G+YTHMTMVAENATGLRNLFKLSS Sbjct: 62 KPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGGGSYTHMTMVAENATGLRNLFKLSS 121 Query: 129 LASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIF 188 LASFEGQLGKW+RMD TTGCPSGEVQTRLRLGH+REALEAAA+WREIF Sbjct: 122 LASFEGQLGKWARMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHDREALEAAARWREIF 181 Query: 189 GPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQT 248 GPENFFLELMDHGLDIERRVREGLL+IG+KLGIPPLATNDCHYVTR+AA+NHEALLC+QT Sbjct: 182 GPENFFLELMDHGLDIERRVREGLLDIGQKLGIPPLATNDCHYVTRDAAQNHEALLCIQT 241 Query: 249 GKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRM 308 GKTLSDP RFKFDGDGYFLKSA EMRALWD QVPGACDSTLLI ERVQSYADVW P+DRM Sbjct: 242 GKTLSDPNRFKFDGDGYFLKSAAEMRALWDGQVPGACDSTLLIAERVQSYADVWTPKDRM 301 Query: 309 PVFPVPEGHDQASWLTHEVKAGL-ERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIV 367 P+FPVPEGHDQ SWLTHEV GL ERRF G PVP+EY RA+YEIKVICDKGFP+YFLIV Sbjct: 302 PIFPVPEGHDQGSWLTHEVMTGLQERRFHGAPVPQEYIDRAQYEIKVICDKGFPAYFLIV 361 Query: 368 ADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXX 427 ADLINYARSVGIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 362 ADLINYARSVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDIDI 421 Query: 428 XXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKA 487 GEMLRYAAN+WGS+RVAQVITFGTIKTKAALKDSARV++GQPGFAIADRITKA Sbjct: 422 DFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRITKA 481 Query: 488 LPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHA 547 LPPPIMAKDIP+SGITDP HERYKEAAEVR LIDTDPDVRTIYETARGLEGLVRNAGVHA Sbjct: 482 LPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRNAGVHA 541 Query: 548 CAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANI 607 CAVIMSSEPLIDAIPLWKRPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNLTIIGD I NI Sbjct: 542 CAVIMSSEPLIDAIPLWKRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIENI 601 Query: 608 KANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLA 667 KANRGI AYELL RGDTLGVFQLDGGPMRDLLRRMQPT FNDIVAVLA Sbjct: 602 KANRGIDVDLESLTLDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 661 Query: 668 LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKV 727 LYRPGPMGMNAHNDYADRKNGRQ IKPIHPELEEPLKDIL+ETYGLIVYQEQIMFIAQKV Sbjct: 662 LYRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLKDILSETYGLIVYQEQIMFIAQKV 721 Query: 728 ASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFN 787 ASY+MGKADALRKAMGKKKLEVLEAEY+GFKEGMTANGFSE AVKALWDTILPFAGYAFN Sbjct: 722 ASYSMGKADALRKAMGKKKLEVLEAEYQGFKEGMTANGFSEKAVKALWDTILPFAGYAFN 781 Query: 788 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 847 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN Sbjct: 782 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 841 Query: 848 ESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKV 907 ES NFASVGDDIRFGLGA+RNVGANVVSSL+ TR EKGKF DFSDYLNKIDI ACNKKV Sbjct: 842 ESVQNFASVGDDIRFGLGAVRNVGANVVSSLVATRKEKGKFADFSDYLNKIDIAACNKKV 901 Query: 908 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGTDA---V 964 TESL+KAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG + +G DA Sbjct: 902 TESLVKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGADGSGADAGDSA 961 Query: 965 FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQ 1024 FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDTQIPAILDGDVAND Q Sbjct: 962 FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVANDTQ 1021 Query: 1025 VLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXX 1084 V VGGILASVNRRVNKNGLPWASAQ+EDLTGGIEVLFFPQTYS+FG Sbjct: 1022 VRVGGILASVNRRVNKNGLPWASAQIEDLTGGIEVLFFPQTYSMFGAEIADDVVVLVGAK 1081 Query: 1085 XXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVH 1144 RI+LIA+EL+VPDFSSA +RP++VSLPTRQCT+DKVTALKQVLA HPGT+QVH Sbjct: 1082 VAIRDDRISLIANELVVPDFSSANVNRPVAVSLPTRQCTVDKVTALKQVLARHPGTAQVH 1141 Query: 1145 LRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 LRLISGERITTLELDQSLRVTPSSALMGDLK LLGPGCLG Sbjct: 1142 LRLISGERITTLELDQSLRVTPSSALMGDLKELLGPGCLG 1181 >tr|A4T9K1|A4T9K1_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 1183 Score = 2068 bits (5359), Expect = 0.0 Identities = 1030/1181 (87%), Positives = 1075/1181 (91%), Gaps = 5/1181 (0%) Query: 9 SGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGI 68 SGSFVHLHNHTEYSMLDGAAK+ PMLAEAQRLEMPAIGMTDHGNMFGASEFYN+AT AGI Sbjct: 2 SGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATDAGI 61 Query: 69 KPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSS 128 KPIIGIEAYIAP SRFDTKRV WGDPGQK DDVSGSG+YTHMTMVAENATGLRNLFKLSS Sbjct: 62 KPIIGIEAYIAPASRFDTKRVLWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLFKLSS 121 Query: 129 LASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIF 188 LASFEGQLGKWSRMD TTGCPSGEVQTRLRLGH+REALEAAA+WREIF Sbjct: 122 LASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHDREALEAAARWREIF 181 Query: 189 GPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQT 248 GPENFFLELMDHGLDIERRVREGLLEIG+KLGIPPLATNDCHYVTR+A++NHEALLC+QT Sbjct: 182 GPENFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNHEALLCIQT 241 Query: 249 GKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRM 308 GKTLSDP RFKFDGDGY+LKSA EMRALWD QVPGACDSTLLI ERVQ Y DVW P+DRM Sbjct: 242 GKTLSDPNRFKFDGDGYYLKSAAEMRALWDGQVPGACDSTLLIAERVQPYTDVWAPKDRM 301 Query: 309 PVFPVPEGHDQASWLTHEVKAGLERRFR---GGPVPEEYTTRAEYEIKVICDKGFPSYFL 365 PVFPVPEGHDQ SWLTHEV AGLERRF GG VP EY RA+YEIKVICDKGFP+YFL Sbjct: 302 PVFPVPEGHDQGSWLTHEVMAGLERRFSAAAGGQVPPEYIERADYEIKVICDKGFPAYFL 361 Query: 366 IVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXX 425 IVADLINYA+SVGIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 362 IVADLINYAKSVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDI 421 Query: 426 XXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRIT 485 GEMLRYAAN+WGS+RVAQVITFGTIKTKAALKDSARV++GQPGFAIADRIT Sbjct: 422 DIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRIT 481 Query: 486 KALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGV 545 KALPPPIMAKDIP+SGITDP HERYKEAAEVR LIDTDPDVRTIYETARGLEGLVRNAGV Sbjct: 482 KALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRNAGV 541 Query: 546 HACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIA 605 HACAVIMSSEPLIDAIPLWKRPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNLTIIGD I Sbjct: 542 HACAVIMSSEPLIDAIPLWKRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIE 601 Query: 606 NIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV 665 NIKANRG+ AYELL RGDTLGVFQLDG MRDLLRRMQPT FNDIVAV Sbjct: 602 NIKANRGVDVDLESLALDDPKAYELLGRGDTLGVFQLDGSAMRDLLRRMQPTEFNDIVAV 661 Query: 666 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ 725 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ Sbjct: 662 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ 721 Query: 726 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA 785 KVASY+MGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA Sbjct: 722 KVASYSMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA 781 Query: 786 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPD 845 FNKSHAAGYGLVSYWTAYLKANY AEYMAGLLTSVGDDKDKAA+YLADCRRLGITVLPPD Sbjct: 782 FNKSHAAGYGLVSYWTAYLKANYQAEYMAGLLTSVGDDKDKAAIYLADCRRLGITVLPPD 841 Query: 846 VNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNK 905 VNES NFASVGDDIRFGLGA+RNVGANVV+SL+ TR EKGK+TDFSDYLNKIDITAC K Sbjct: 842 VNESVQNFASVGDDIRFGLGAVRNVGANVVASLVSTREEKGKYTDFSDYLNKIDITACTK 901 Query: 906 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGT--DA 963 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGG+D G D+ Sbjct: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGDDDGDTGDS 961 Query: 964 VFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDA 1023 FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNG+AHLL QVDTQIPAIL+G + NDA Sbjct: 962 AFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGIAHLLTAQVDTQIPAILEGAIPNDA 1021 Query: 1024 QVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXX 1083 QV VGGILASVNRRVNKNGLPWASAQ+EDL+GGIEVLFFPQTYS+FG Sbjct: 1022 QVRVGGILASVNRRVNKNGLPWASAQIEDLSGGIEVLFFPQTYSMFGAEIADDVVVLVGA 1081 Query: 1084 XXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQV 1143 RI+LIA+ELIVPDF+SAQ +RP++VSLPTRQCT+DKVTALKQVLA HPGT+QV Sbjct: 1082 KVAKRDDRISLIANELIVPDFTSAQVNRPVAVSLPTRQCTVDKVTALKQVLARHPGTAQV 1141 Query: 1144 HLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 HLRLISGERITTLELDQSLRVTPSSALMGDLK LLGPGCLG Sbjct: 1142 HLRLISGERITTLELDQSLRVTPSSALMGDLKELLGPGCLG 1182 >tr|B2HQ75|B2HQ75_MYCMM Tax_Id=216594 (dnaE1)SubName: Full=DNA polymerase III, alpha subunit, DnaE1;[Mycobacterium marinum] Length = 1180 Score = 2032 bits (5264), Expect = 0.0 Identities = 1011/1179 (85%), Positives = 1068/1179 (90%), Gaps = 2/1179 (0%) Query: 6 GRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATK 65 G SS SFVHLHNHTEYSMLDGAAKITPMLAE +RL+MPAIGMTDHGNMFGASEFYNSATK Sbjct: 3 GSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATK 62 Query: 66 AGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFK 125 AG+KPIIG+EAY+APGSRFDT+R+TWGDP QKGDDVSGSG+YTH+TMVAENATGLRNLFK Sbjct: 63 AGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFK 122 Query: 126 LSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWR 185 LSSLASFEGQLGKWSRMD TTGCPSGEVQTRLRLGH+REALE+AAKWR Sbjct: 123 LSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWR 182 Query: 186 EIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLC 245 EIFG +N+FLELMDHGL IERRVREGL+EIGRKL IPPLATNDCHYVTR+AA NHEALLC Sbjct: 183 EIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLC 242 Query: 246 VQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPR 305 VQTGKTLSDP RFKFDGDGY+LKSA EMR LWD +PGACDSTLLI ERVQSYADVW PR Sbjct: 243 VQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR 302 Query: 306 DRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFL 365 DRMP+FPVPEGHD ASWL HEV AGL RRF G + ++Y RAEYEIKVICDKGFPSYFL Sbjct: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFL 361 Query: 366 IVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXX 425 IVADLINYARSV IRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 362 IVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDI 421 Query: 426 XXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRIT 485 GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAIADRIT Sbjct: 422 DIDFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRIT 481 Query: 486 KALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGV 545 KALPPPIMAKDIPLSGITDP HER+KEAAEVRGLI+TDPDVRTIY+TARGLEGL+RNAGV Sbjct: 482 KALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGV 541 Query: 546 HACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIA 605 HACAVIMSSEPL +AIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI Sbjct: 542 HACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIE 601 Query: 606 NIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV 665 NIKANRGI YELL RG+TLGVFQLDGGPMRDLLRRMQPT FNDIVAV Sbjct: 602 NIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAV 661 Query: 666 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ 725 LALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL++IL+ETYGLIVYQEQIMFIAQ Sbjct: 662 LALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQ 721 Query: 726 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA 785 KVASYTMGKADALRKAMGKKKLEVLEAEYKGF EGMTANGFSE AVKALWDTILPFAGYA Sbjct: 722 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYA 781 Query: 786 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPD 845 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPPD Sbjct: 782 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPD 841 Query: 846 VNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNK 905 VNES NFASVG DIRFGLGA+RNVGANVV SLI TR+ KGKFTDFSDYLNKIDI+ACNK Sbjct: 842 VNESLVNFASVGQDIRFGLGAVRNVGANVVGSLIGTRSGKGKFTDFSDYLNKIDISACNK 901 Query: 906 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGTDAVF 965 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF GG D+G DAVF Sbjct: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF-GGSDSGADAVF 960 Query: 966 TIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQV 1025 TIKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGDV+NDAQV Sbjct: 961 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV 1020 Query: 1026 LVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXX 1085 VGGILA+VNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1021 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 Query: 1086 XXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHL 1145 RI+LIA+EL+VPDFS+AQADRPL+VSLPTRQCTIDKVTALKQVLA HPGTSQVHL Sbjct: 1081 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL 1140 Query: 1146 RLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 RLISG+RITTLELDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1141 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 >tr|A0PNY7|A0PNY7_MYCUA Tax_Id=362242 (dnaE1)SubName: Full=DNA polymerase III, alpha subunit, DnaE1;[Mycobacterium ulcerans] Length = 1180 Score = 2031 bits (5262), Expect = 0.0 Identities = 1010/1179 (85%), Positives = 1068/1179 (90%), Gaps = 2/1179 (0%) Query: 6 GRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATK 65 G SS SFVHLHNHTEYSMLDGAAKITPMLAE +RL+MPAIGMTDHGNMFGASEFYNSATK Sbjct: 3 GSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATK 62 Query: 66 AGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFK 125 AG+KPIIG+EAY+APGSRFDT+R+TWGDP QKGDDVSGSG+YTH+TMVAENATGLRNLFK Sbjct: 63 AGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFK 122 Query: 126 LSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWR 185 LSSLASFEGQLGKWSRMD TTGCPSGEVQTRLRLGH+REALE+AAKWR Sbjct: 123 LSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWR 182 Query: 186 EIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLC 245 EIFG +N+FLELMDHGL IERRVREGL+EIGRKL IPPLATNDCHYVTR+AA NHEALLC Sbjct: 183 EIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLC 242 Query: 246 VQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPR 305 VQTGKTLSDP RFKFDGDGY+LKSA EMR LWD +PGACDSTLLI ERVQSYADVW PR Sbjct: 243 VQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR 302 Query: 306 DRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFL 365 DRMP+FPVPEGHD ASWL HEV AGL RRF G + ++Y RAEYEIKVICDKGFPSYFL Sbjct: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFL 361 Query: 366 IVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXX 425 IVADLINYARSV IRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 362 IVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDI 421 Query: 426 XXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRIT 485 GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAIADRIT Sbjct: 422 DIDFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRIT 481 Query: 486 KALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGV 545 KALPPPIMAKDIPLSGITDP HER+KEAAEVRGLI+TDPDVRTIY+TARGLEGL+RNAGV Sbjct: 482 KALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGV 541 Query: 546 HACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIA 605 HACAVIMSSEPL +AIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI Sbjct: 542 HACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIE 601 Query: 606 NIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV 665 NI+ANRGI YELL RG+TLGVFQLDGGPMRDLLRRMQPT FNDIVAV Sbjct: 602 NIEANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAV 661 Query: 666 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ 725 LALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL++IL+ETYGLIVYQEQIMFIAQ Sbjct: 662 LALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQ 721 Query: 726 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA 785 KVASYTMGKADALRKAMGKKKLEVLEAEYKGF EGMTANGFSE AVKALWDTILPFAGYA Sbjct: 722 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYA 781 Query: 786 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPD 845 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPPD Sbjct: 782 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPD 841 Query: 846 VNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNK 905 VNES NFASVG DIRFGLGA+RNVGANVV SLI TR+ KGKFTDFSDYLNKIDI+ACNK Sbjct: 842 VNESLVNFASVGQDIRFGLGAVRNVGANVVGSLIGTRSGKGKFTDFSDYLNKIDISACNK 901 Query: 906 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGTDAVF 965 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF GG D+G DAVF Sbjct: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF-GGSDSGADAVF 960 Query: 966 TIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQV 1025 TIKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGDV+NDAQV Sbjct: 961 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLATQVDTAIPAILDGDVSNDAQV 1020 Query: 1026 LVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXX 1085 VGGILA+VNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1021 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 Query: 1086 XXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHL 1145 RI+LIA+EL+VPDFS+AQADRPL+VSLPTRQCTIDKVTALKQVLA HPGTSQVHL Sbjct: 1081 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL 1140 Query: 1146 RLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 RLISG+RITTLELDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1141 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 >tr|Q740T5|Q740T5_MYCPA Tax_Id=1770 (dnaE1)SubName: Full=DnaE1;[Mycobacterium paratuberculosis] Length = 1177 Score = 2021 bits (5236), Expect = 0.0 Identities = 1011/1175 (86%), Positives = 1063/1175 (90%), Gaps = 4/1175 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFYN+ATKAGIKP Sbjct: 5 SFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNAATKAGIKP 64 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TMVAENA GLRNLFKLSSLA Sbjct: 65 IIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMVAENAAGLRNLFKLSSLA 124 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 SFEGQLGKWSRMD TTGCPSGEVQTRLRLG +REALE+AAKWREIFG Sbjct: 125 SFEGQLGKWSRMDAELIAEHADGIIATTGCPSGEVQTRLRLGQDREALESAAKWREIFGA 184 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +NFFLELMDHGL IE+RVR+GLLEIGRKL IPPLATNDCHY+TR+AA NHEALLCVQTGK Sbjct: 185 DNFFLELMDHGLSIEQRVRDGLLEIGRKLNIPPLATNDCHYITRDAAHNHEALLCVQTGK 244 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDP RFKFDGDGY+LKSA EMR +WD++VPGACDSTLLI ERVQSYA+VW PRDRMPV Sbjct: 245 TLSDPNRFKFDGDGYYLKSAAEMRQIWDAEVPGACDSTLLIAERVQSYAEVWTPRDRMPV 304 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPEGHDQASWL HEV AGL RRF G V ++Y RAEYEIKVICDKGFPSYFLIVADL Sbjct: 305 FPVPEGHDQASWLHHEVMAGLRRRFPDG-VGQDYIDRAEYEIKVICDKGFPSYFLIVADL 363 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 INYARSV IRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 364 INYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDIDFD 423 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+RYAA++WGS+RVAQVITFGTIKTKAALKDSAR+++GQPGFAIADRITKALPP Sbjct: 424 DRRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPP 483 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+RNAGVHACAV Sbjct: 484 PIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAV 543 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMSSEPL +AIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA+ NIKAN Sbjct: 544 IMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNIKAN 603 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPT FNDIVAVLALYR Sbjct: 604 RGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYR 663 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPL++ILAETYGLIVYQEQIMFIAQKVASY Sbjct: 664 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILAETYGLIVYQEQIMFIAQKVASY 723 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 TMGKADALRKAMGKKKLEVLEAEYKGF EGMTANGFSE AVKALWDTILPFAGYAFNKSH Sbjct: 724 TMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSH 783 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPPDVNES Sbjct: 784 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESL 843 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 NFASVG DIRFGLGA+RNVGANVV SLIKTR EKGKFTDFSDYLNKIDI+ACNKKVTES Sbjct: 844 VNFASVGQDIRFGLGAVRNVGANVVGSLIKTRNEKGKFTDFSDYLNKIDISACNKKVTES 903 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTG-TDAVFTIKV 969 LIKAGAFDSL H RKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG D G T++VFTIKV Sbjct: 904 LIKAGAFDSLKHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG--DGGCTESVFTIKV 961 Query: 970 PDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLVGG 1029 PD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDTQIPAILDGDV N+ QV VGG Sbjct: 962 PDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVGG 1021 Query: 1030 ILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXXXX 1089 ILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP YS +G Sbjct: 1022 ILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDAVVLINAKVAIRD 1081 Query: 1090 XRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRLIS 1149 RIALIA+EL+VPDFS+AQ DRPL+VSLPTRQCTIDKVTALKQVLA HPGTSQVHLRLIS Sbjct: 1082 DRIALIANELVVPDFSTAQVDRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLIS 1141 Query: 1150 GERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 G+RITTLELD SLRVTPS ALMGDLK LLGPGCLG Sbjct: 1142 GDRITTLELDASLRVTPSPALMGDLKELLGPGCLG 1176 >tr|A0QHL8|A0QHL8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Mycobacterium avium] Length = 1177 Score = 2018 bits (5229), Expect = 0.0 Identities = 1012/1175 (86%), Positives = 1061/1175 (90%), Gaps = 4/1175 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFYN+ATKAGIKP Sbjct: 5 SFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNAATKAGIKP 64 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TMVAENA GLRNLFKLSSLA Sbjct: 65 IIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMVAENAAGLRNLFKLSSLA 124 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 SFEGQLGKWSRMD TTGCPSGEVQTRLRLG +REALE+AAKWREIFG Sbjct: 125 SFEGQLGKWSRMDAELIAEHADGIIATTGCPSGEVQTRLRLGQDREALESAAKWREIFGA 184 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +NFFLELMDHGL IE+RVR GLLEIGRKL IPPLATNDCHYVTR+AA NHEALLCVQTGK Sbjct: 185 DNFFLELMDHGLSIEQRVRGGLLEIGRKLNIPPLATNDCHYVTRDAAHNHEALLCVQTGK 244 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDP RFKFDGDGY+LKSA EMR +WD++VPGACDSTLLI ERVQSYA+VW PRDRMPV Sbjct: 245 TLSDPNRFKFDGDGYYLKSAAEMRQIWDAEVPGACDSTLLIAERVQSYAEVWTPRDRMPV 304 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPEGHDQASWL HEV AGL RRF G V ++Y RAEYEIKVICDKGFPSYFLIVADL Sbjct: 305 FPVPEGHDQASWLHHEVMAGLRRRFPDG-VGQDYIDRAEYEIKVICDKGFPSYFLIVADL 363 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 INYARSV IRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 364 INYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDIDFD 423 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+RYAA++WGS+RVAQVITFGTIKTKAALKDSAR+++GQPGFAIADRITKALPP Sbjct: 424 DRRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPP 483 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+RNAGVHACAV Sbjct: 484 PIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAV 543 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMSSEPL +AIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA+ NIKAN Sbjct: 544 IMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNIKAN 603 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPT FNDIVAVLALYR Sbjct: 604 RGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYR 663 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPL++ILAETYGLIVYQEQIMFIAQKVASY Sbjct: 664 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILAETYGLIVYQEQIMFIAQKVASY 723 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 TMGKADALRKAMGKKKLEVLEAEYKGF EGMTANGFSE AVKALWDTILPFAGYAFNKSH Sbjct: 724 TMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSH 783 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPPDVNES Sbjct: 784 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESL 843 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 NFASVG DIRFGLGA+RNVGANVV SLIKTR EKGKFTDFSDYLNKIDI+ACNKKVTES Sbjct: 844 VNFASVGQDIRFGLGAVRNVGANVVGSLIKTREEKGKFTDFSDYLNKIDISACNKKVTES 903 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTG-TDAVFTIKV 969 LIKAGAFDSL H RKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG D G T++VFTIKV Sbjct: 904 LIKAGAFDSLKHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG--DGGCTESVFTIKV 961 Query: 970 PDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLVGG 1029 PD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDTQIPAILDGDV N+ QV VGG Sbjct: 962 PDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVGG 1021 Query: 1030 ILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXXXX 1089 ILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP YS +G Sbjct: 1022 ILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDAVVLINAKVAIRD 1081 Query: 1090 XRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRLIS 1149 RIALIA+EL+VPDFS AQ DRPL+VSLPTRQCTIDKVTALKQVLA HPGTSQVHLRLIS Sbjct: 1082 DRIALIANELVVPDFSIAQVDRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLIS 1141 Query: 1150 GERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 G+RITTLELD SLRVTPS ALMGDLK LLGPGCLG Sbjct: 1142 GDRITTLELDASLRVTPSPALMGDLKELLGPGCLG 1176 >tr|D5P2P4|D5P2P4_9MYCO Tax_Id=525368 (dnaE)SubName: Full=DNA-directed DNA polymerase III alpha subunit; EC=2.7.7.7;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 1181 Score = 2013 bits (5216), Expect = 0.0 Identities = 1003/1178 (85%), Positives = 1060/1178 (89%), Gaps = 3/1178 (0%) Query: 9 SGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGI 68 S SFVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFYN+ATKAGI Sbjct: 4 SSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNAATKAGI 63 Query: 69 KPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSS 128 KPIIG+EAYIAPGSRFDT+R+ WGDPGQK DDVSGSG+YTH+TMVAENATGLRNLFKLSS Sbjct: 64 KPIIGVEAYIAPGSRFDTRRIQWGDPGQKSDDVSGSGSYTHLTMVAENATGLRNLFKLSS 123 Query: 129 LASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIF 188 LASFEGQLGKWSRMD TTGCPSGEVQTRLRLGH+REALE+AAKWREIF Sbjct: 124 LASFEGQLGKWSRMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIF 183 Query: 189 GPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQT 248 G +N+FLELMDHGL IE+RVREGLLEIGRKLGIPPLATNDCHYVTR+AA NHEALLCVQT Sbjct: 184 GADNYFLELMDHGLSIEQRVREGLLEIGRKLGIPPLATNDCHYVTRDAAHNHEALLCVQT 243 Query: 249 GKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRM 308 GKTLSDP RFKFDGDGY+LKSA EMR LWD Q+PGACDSTLLI ERVQ Y DVW RDRM Sbjct: 244 GKTLSDPNRFKFDGDGYYLKSAAEMRRLWDDQIPGACDSTLLIAERVQPYDDVWAQRDRM 303 Query: 309 PVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVA 368 P+FPVPEGHDQASWL HEV AGL RRF G V ++Y RAEYEIKVICDKGFPSYFLIVA Sbjct: 304 PIFPVPEGHDQASWLHHEVMAGLRRRFPSG-VGQDYIDRAEYEIKVICDKGFPSYFLIVA 362 Query: 369 DLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXX 428 DLINYARSV IRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 363 DLINYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDID 422 Query: 429 XXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKAL 488 GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAIADRITKAL Sbjct: 423 FDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 482 Query: 489 PPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHAC 548 PPPIMAKDIPLSGITDP HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+RNAGVHAC Sbjct: 483 PPPIMAKDIPLSGITDPEHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 542 Query: 549 AVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIK 608 AVIMSSEPL +AIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA+ NIK Sbjct: 543 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALENIK 602 Query: 609 ANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLAL 668 ANRG+ YELL RGDTLGVFQLDGGPMRDLLRRMQPT FNDIVAVLAL Sbjct: 603 ANRGVDLDLESVPLDDEPTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLAL 662 Query: 669 YRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVA 728 YRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++IL+ETYGLIVYQEQIMFIAQKVA Sbjct: 663 YRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVA 722 Query: 729 SYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNK 788 SYTMGKADALRKAMGKKKLEVLEAEYKGF+EGMTANGFSE AVKALWDTILPFAGYAFNK Sbjct: 723 SYTMGKADALRKAMGKKKLEVLEAEYKGFQEGMTANGFSEKAVKALWDTILPFAGYAFNK 782 Query: 789 SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNE 848 SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPPDVNE Sbjct: 783 SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE 842 Query: 849 SEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVT 908 S NFASVG DIRFGLGA+RNVGANVV SLIKTR EKGKFTDFSDYLNKIDI+ACNKKVT Sbjct: 843 SLVNFASVGQDIRFGLGAVRNVGANVVGSLIKTRNEKGKFTDFSDYLNKIDISACNKKVT 902 Query: 909 ESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG--GEDTGTDAVFT 966 ESLIKAGAFDSL H RKGLFLVHTDAVDSVLGTKKAEA+GQFDLFGG GE TD+VFT Sbjct: 903 ESLIKAGAFDSLSHARKGLFLVHTDAVDSVLGTKKAEAIGQFDLFGGSDGEAGCTDSVFT 962 Query: 967 IKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVL 1026 IKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA Q DTQIPAILDGDV N++QV Sbjct: 963 IKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQTDTQIPAILDGDVPNESQVR 1022 Query: 1027 VGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXX 1086 VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP YS +G Sbjct: 1023 VGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDTVVLINAKVA 1082 Query: 1087 XXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLR 1146 RI+LIA+EL+VPDFS+AQ +RP++VSLPTRQCTIDKV+ALKQVLA HPGTSQVHLR Sbjct: 1083 IRDDRISLIANELVVPDFSNAQPNRPIAVSLPTRQCTIDKVSALKQVLARHPGTSQVHLR 1142 Query: 1147 LISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 LISG+RITTLELD SLRVTPS ALMGDLK LLGPGCLG Sbjct: 1143 LISGDRITTLELDASLRVTPSPALMGDLKELLGPGCLG 1180 >sp|P63977|DPO3A_MYCTU Tax_Id=1773 (dnaE1)RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >sp|P63978|DPO3A_MYCBO Tax_Id=1765 (dnaE)RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium bovis] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|C6DSP5|C6DSP5_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|C1ANI3|C1ANI3_MYCBT Tax_Id=561275 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium bovis] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|A5WMN4|A5WMN4_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase III alpha subunit dnaE1 (DNA nucleotidyltransferase);[Mycobacterium tuberculosis] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|A5U2Q4|A5U2Q4_MYCTA Tax_Id=419947 (dnaE1)SubName: Full=DNA polymerase III subunit alpha DnaE1;[Mycobacterium tuberculosis] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|A1KIX8|A1KIX8_MYCBP Tax_Id=410289 (dnaE1)SubName: Full=Probable DNA polymerase III (Alpha chain) dnaE1; EC=2.7.7.7;[Mycobacterium bovis] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D6G8T7|D6G8T7_MYCTU Tax_Id=478435 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis KZN 605] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D6FT85|D6FT85_MYCTU Tax_Id=611304 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis K85] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D6FH59|D6FH59_MYCTU Tax_Id=611303 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis CPHL_A] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D6F8R1|D6F8R1_MYCTU Tax_Id=611302 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis T46] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D5ZFY5|D5ZFY5_MYCTU Tax_Id=537210 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis T17] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D5Z441|D5Z441_MYCTU Tax_Id=537209 SubName: Full=DNA polymerase III (Alpha chain) dnaE1 (DNA nucleotidyltransferase);[Mycobacterium tuberculosis GM 1503] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D5YF55|D5YF55_MYCTU Tax_Id=520140 SubName: Full=DNA polymerase III subunit alpha;[Mycobacterium tuberculosis EAS054] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D5Y3K5|D5Y3K5_MYCTU Tax_Id=520141 SubName: Full=DNA polymerase III subunit alpha DnaE1;[Mycobacterium tuberculosis T85] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D5XTJ0|D5XTJ0_MYCTU Tax_Id=515617 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis T92] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|A4KH92|A4KH92_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase III (Alpha chain) dnaE1 (DNA nucleotidyltransferase);[Mycobacterium tuberculosis str. Haarlem] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|A2VI63|A2VI63_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase III (Alpha chain) dnaE1 (DNA nucleotidyltransferase);[Mycobacterium tuberculosis C] Length = 1184 Score = 1961 bits (5081), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1048/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 +ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 SACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|D5YRI7|D5YRI7_MYCTU Tax_Id=515616 SubName: Full=DNA polymerase III subunit alpha;[Mycobacterium tuberculosis 02_1987] Length = 1184 Score = 1961 bits (5079), Expect = 0.0 Identities = 978/1186 (82%), Positives = 1047/1186 (88%), Gaps = 5/1186 (0%) Query: 1 MSGTDGRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFY 60 MSG+ SS FVHLHNHTEYSMLDGAAKITPMLAE +RL MPA+GMTDHGNMFGASEFY Sbjct: 1 MSGSSAGSS--FVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFY 58 Query: 61 NSATKAGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGL 120 NSATKAGIKPIIG+EAYIAPGSRFDT+R+ WGDP QK DDVSGSG+YTH+TM+AENATGL Sbjct: 59 NSATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGL 118 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLFKLSS ASFEGQL KWSRMD TTGCPSGEVQTRLRLG +REALEA Sbjct: 119 RNLFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEA 178 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AAKWREI GP+N+FLELMDHGL IERRVR+GLLEIGR L IPPLATNDCHYVTR+AA NH Sbjct: 179 AAKWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNH 238 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 EALLCVQTGKTLSDP RFKFDGDGY+LKSA EMR +WD +VPGACDSTLLI ERVQSYAD Sbjct: 239 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYAD 298 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 VW PRDRMPVFPVP+GHDQASWL HEV AGL RRF GP P+ Y RA YEI VIC KGF Sbjct: 299 VWTPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGP-PDGYRERAAYEIDVICSKGF 357 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFLIVADLI+YARS GIRVGPGRGSAAGSLVAYALGIT+IDPIPHGLLFERFLNPER Sbjct: 358 PSYFLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERT 417 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAI Sbjct: 418 SMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAI 477 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 ADRITKALPP IMAKDIPLSGITDP+HERYKEAAEVRGLI+TDPDVRTIY+TARGLEGL+ Sbjct: 478 ADRITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLI 537 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTII Sbjct: 538 RNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTII 597 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI N++ANRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF Sbjct: 598 GDAIDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFE 657 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 D+VAV+ALYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQI Sbjct: 658 DVVAVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQI 717 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILP Sbjct: 718 MRIAQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILP 777 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FA YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGIT Sbjct: 778 FADYAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGIT 837 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES NFASVG DIR+GLGA+RNVGANVV SL++TR +KGKFTDFSDYLNKIDI Sbjct: 838 VLPPDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDI 897 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGED-T 959 ACNKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D T Sbjct: 898 LACNKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGT 957 Query: 960 GT-DAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGD 1018 GT D VFTIKVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGD Sbjct: 958 GTADPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1017 Query: 1019 VANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXX 1078 V NDAQV VGGILASVNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +G Sbjct: 1018 VPNDAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAV 1077 Query: 1079 XXXXXXXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHP 1138 RIALIA++L VPDFS+A+ +RPL+VSLPTRQCT DKV+ALKQVLA HP Sbjct: 1078 VLVNAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHP 1137 Query: 1139 GTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 GTSQVHLRLISG+RITTL LDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1138 GTSQVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLG 1183 >tr|B1MC05|B1MC05_MYCA9 Tax_Id=561007 SubName: Full=DNA polymerase III alpha subunit;[Mycobacterium abscessus] Length = 1185 Score = 1957 bits (5071), Expect = 0.0 Identities = 973/1181 (82%), Positives = 1040/1181 (88%), Gaps = 4/1181 (0%) Query: 8 SSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAG 67 S+ SFVHLHNHTEYSMLDGAAKI PMLAE +RL M A+GMTDHGNM+GASEFYN A G Sbjct: 4 SNSSFVHLHNHTEYSMLDGAAKIKPMLAEVERLGMSAVGMTDHGNMYGASEFYNVAAATG 63 Query: 68 IKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS 127 +KPIIGIEAYIAP SRFDTKRV WGDPGQK DDVSGSG+YTHMTMVAENATGLRNLFKLS Sbjct: 64 VKPIIGIEAYIAPASRFDTKRVFWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLFKLS 123 Query: 128 SLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREI 187 SLASFEGQLGKW+RMD TTGCPSGEVQTRLRLG E EAL AAAKW++I Sbjct: 124 SLASFEGQLGKWARMDADLIAEHASGIIATTGCPSGEVQTRLRLGQESEALAAAAKWQDI 183 Query: 188 FGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQ 247 FG +NFFLELMDHGL IERRVREGLLE+G+KLGIPPLATNDCHYVT++ A NHEALLCVQ Sbjct: 184 FGKDNFFLELMDHGLSIERRVREGLLEVGKKLGIPPLATNDCHYVTKDHAHNHEALLCVQ 243 Query: 248 TGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDR 307 TGKTLSDPTRFKFDGDGY+LK A EMR LWD VPGACD+TLLI ERVQSY DVW +DR Sbjct: 244 TGKTLSDPTRFKFDGDGYYLKPASEMRDLWDDAVPGACDNTLLIAERVQSYEDVWNFKDR 303 Query: 308 MPVFPVPEGHDQASWLTHEVKAGLERRFRGGP--VPEEYTTRAEYEIKVICDKGFPSYFL 365 MP+FPVPEG DQ SWL EV GLERRF G P VP+EY TRA YE+ VI KGFP+YFL Sbjct: 304 MPIFPVPEGEDQDSWLRKEVDRGLERRFEGVPGGVPDEYFTRAHYELDVIKQKGFPAYFL 363 Query: 366 IVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXX 425 +V DL+++A+ VGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 364 VVGDLVSHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDI 423 Query: 426 XXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRIT 485 GEM+RYA +WGS+RVAQVITFGTIKTKAALKDSAR+++GQPGFAIADRIT Sbjct: 424 DIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRIT 483 Query: 486 KALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGV 545 KALPPPIMAKDIP+ GIT+P HERYKEAAEVR LIDTDPDVR IY+TA GLEGL+RNAGV Sbjct: 484 KALPPPIMAKDIPVWGITNPEHERYKEAAEVRTLIDTDPDVRNIYQTALGLEGLIRNAGV 543 Query: 546 HACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIA 605 HACAVIMSSEPL DAIPLWKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDA+ Sbjct: 544 HACAVIMSSEPLTDAIPLWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALD 603 Query: 606 NIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV 665 NIKANRGI A YELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV Sbjct: 604 NIKANRGIDLDLDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV 663 Query: 666 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ 725 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAET+GLIVYQEQIMFIAQ Sbjct: 664 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETFGLIVYQEQIMFIAQ 723 Query: 726 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA 785 KVASY+MGKADALRKAMGKKKLEVLEAEYKGF EGMT NGFSE AVKALWDTILPFAGYA Sbjct: 724 KVASYSMGKADALRKAMGKKKLEVLEAEYKGFYEGMTNNGFSEKAVKALWDTILPFAGYA 783 Query: 786 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPD 845 FNKSHAAGYGLVS+WTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPD Sbjct: 784 FNKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPD 843 Query: 846 VNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNK 905 VNES HNFASVG+DIR+GLG +RNVGANVV SLI TR EKG FTDFSDYL+KIDI ACNK Sbjct: 844 VNESVHNFASVGEDIRYGLGGVRNVGANVVQSLIATREEKGAFTDFSDYLHKIDIAACNK 903 Query: 906 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGTDA-- 963 KVTESL+KAGAFDSLGHPRKGLFLV +DAVDSVLGTKKAEAMGQFDLFGGG + A Sbjct: 904 KVTESLVKAGAFDSLGHPRKGLFLVQSDAVDSVLGTKKAEAMGQFDLFGGGGEDSVPASD 963 Query: 964 VFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDA 1023 +F IKVPD+EWE+KHKLALEREMLGLYVSGHPLNGVAHLL+ Q DTQIPAILDG+VANDA Sbjct: 964 IFAIKVPDDEWEEKHKLALEREMLGLYVSGHPLNGVAHLLSRQTDTQIPAILDGEVANDA 1023 Query: 1024 QVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXX 1083 V VGGILASVNRRVNKNG+PWASAQLEDLTGGIEVLFFPQ YS++G Sbjct: 1024 VVKVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVLFFPQAYSVYGADIADDAVVLVNA 1083 Query: 1084 XXXXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQV 1143 R++LIA++L+VPDFS A DRP++V++PTRQCTIDKVTALKQVL HPGT+QV Sbjct: 1084 KVAIRDDRVSLIANDLVVPDFSQAADDRPVAVTMPTRQCTIDKVTALKQVLTRHPGTNQV 1143 Query: 1144 HLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 HLRLISGER+TTLELDQSLRVTPSSALMGDLKALLGPGCLG Sbjct: 1144 HLRLISGERVTTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 >sp|Q9X7F0|DPO3A_MYCLE Tax_Id=1769 (dnaE)RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium leprae] Length = 1177 Score = 1926 bits (4990), Expect = 0.0 Identities = 959/1177 (81%), Positives = 1026/1177 (87%), Gaps = 2/1177 (0%) Query: 8 SSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAG 67 + SFVHLHNHTEYSMLDGAAKITPM AE +RL+MPA+GMTDHGNMFGASEFYN+A KAG Sbjct: 2 NQSSFVHLHNHTEYSMLDGAAKITPMFAEVERLQMPAVGMTDHGNMFGASEFYNTAIKAG 61 Query: 68 IKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS 127 IKPIIG+EAYIAPGSRFDT+R+TWGDP QK DDVS GAYTH+TMVAENA GLRNLFKLS Sbjct: 62 IKPIIGVEAYIAPGSRFDTRRITWGDPSQKADDVSAGGAYTHLTMVAENAAGLRNLFKLS 121 Query: 128 SLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREI 187 SLASFEGQL KWSRMD TTGCPSGEVQTRLRLGH+REALE+AAKWREI Sbjct: 122 SLASFEGQLSKWSRMDAELIGEYAEGIIVTTGCPSGEVQTRLRLGHDREALESAAKWREI 181 Query: 188 FGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQ 247 GP+N+FLELMDHGL IE+RVREGLL IGRKL IPPLATNDCHYVTR+A NHEALLCVQ Sbjct: 182 VGPDNYFLELMDHGLSIEQRVREGLLNIGRKLNIPPLATNDCHYVTRDAVHNHEALLCVQ 241 Query: 248 TGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDR 307 TGKTLSDP RFKF GDGY+LKSA EMR LWD +VPGACDSTLLI ERVQSYADVWEPR+R Sbjct: 242 TGKTLSDPNRFKFHGDGYYLKSAAEMRQLWDDEVPGACDSTLLIAERVQSYADVWEPRNR 301 Query: 308 MPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIV 367 MPVFPVP GHDQASWL HEV AGL+RRF GP P Y RA YEI VICDKGFP+YFLIV Sbjct: 302 MPVFPVPVGHDQASWLRHEVDAGLKRRFPDGP-PNGYVERAAYEIDVICDKGFPAYFLIV 360 Query: 368 ADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXX 427 ADL+N+ARSVGIRVGPGRGSAAGSL AYALGIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 ADLVNHARSVGIRVGPGRGSAAGSLAAYALGITDIDPIPHGLLFERFLNPERTSMPDIDI 420 Query: 428 XXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKA 487 GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFA+ADRITKA Sbjct: 421 DFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAMADRITKA 480 Query: 488 LPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHA 547 LPP IMAKDIPLSGITDP HER+KEAAEVR LI+TD DVR IY+TARGLEGL+RNAGVHA Sbjct: 481 LPPAIMAKDIPLSGITDPAHERFKEAAEVRSLIETDSDVRIIYQTARGLEGLIRNAGVHA 540 Query: 548 CAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANI 607 CAVI+SSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDAI NI Sbjct: 541 CAVILSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDAIENI 600 Query: 608 KANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLA 667 K NRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF DIVAVLA Sbjct: 601 KTNRGIDLDLESVPLDDQATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDIVAVLA 660 Query: 668 LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKV 727 LYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQIM IAQKV Sbjct: 661 LYRPGPMGMNAHNDYADRKNNRQVIKPIHPELEEPLREILAETYGLIVYQEQIMRIAQKV 720 Query: 728 ASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFN 787 A Y++ +AD LRKAMGKKK EVLE E++GF EGM ANGFS A+KALWD ILPFA YAFN Sbjct: 721 AGYSLARADILRKAMGKKKREVLEKEFEGFSEGMQANGFSVHAIKALWDIILPFADYAFN 780 Query: 788 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 847 KSHAAGYGL+SYWTAYLKAN+ EYMAGLLTSVGDDKDKAAVYLADCR+ GITVLPPDVN Sbjct: 781 KSHAAGYGLISYWTAYLKANFAGEYMAGLLTSVGDDKDKAAVYLADCRKFGITVLPPDVN 840 Query: 848 ESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKV 907 ES +FASVG DIR+GLGA+RNVGANVV SLIKTR KGKF DFSDYLNKIDIT+CNKKV Sbjct: 841 ESVLDFASVGADIRYGLGAVRNVGANVVGSLIKTRNAKGKFADFSDYLNKIDITSCNKKV 900 Query: 908 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGTDAVFTI 967 TESLIKAGAFDSLGH RKGLFLVH DAVDSVLGTKKAEA+GQFDLF GG D GTDAVFTI Sbjct: 901 TESLIKAGAFDSLGHSRKGLFLVHADAVDSVLGTKKAEAIGQFDLF-GGTDGGTDAVFTI 959 Query: 968 KVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLV 1027 KVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IP ILDG V+ND QV V Sbjct: 960 KVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPTILDGGVSNDTQVRV 1019 Query: 1028 GGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXX 1087 GGILA+VNRRVNKNG+PWASAQL+DLTGGIEV+FFP TYS +G Sbjct: 1020 GGILAAVNRRVNKNGIPWASAQLDDLTGGIEVMFFPHTYSSYGADIIDDAVVLVNAKVVV 1079 Query: 1088 XXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRL 1147 RIALIA++L+VPDFS+ Q DRPL+VSL TRQCT DKV ALKQVLA HPGTSQVHLRL Sbjct: 1080 RDDRIALIANQLVVPDFSNVQEDRPLAVSLLTRQCTFDKVNALKQVLARHPGTSQVHLRL 1139 Query: 1148 ISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 ISG+RITTLELDQSLRVT S ALMGDLKALLGPGCLG Sbjct: 1140 ISGDRITTLELDQSLRVTSSPALMGDLKALLGPGCLG 1176 >tr|B8ZR78|B8ZR78_MYCLB Tax_Id=561304 (dnaE)SubName: Full=DNA polymerase III, [alpha] subunit;[Mycobacterium leprae] Length = 1177 Score = 1926 bits (4990), Expect = 0.0 Identities = 959/1177 (81%), Positives = 1026/1177 (87%), Gaps = 2/1177 (0%) Query: 8 SSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAG 67 + SFVHLHNHTEYSMLDGAAKITPM AE +RL+MPA+GMTDHGNMFGASEFYN+A KAG Sbjct: 2 NQSSFVHLHNHTEYSMLDGAAKITPMFAEVERLQMPAVGMTDHGNMFGASEFYNTAIKAG 61 Query: 68 IKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS 127 IKPIIG+EAYIAPGSRFDT+R+TWGDP QK DDVS GAYTH+TMVAENA GLRNLFKLS Sbjct: 62 IKPIIGVEAYIAPGSRFDTRRITWGDPSQKADDVSAGGAYTHLTMVAENAAGLRNLFKLS 121 Query: 128 SLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREI 187 SLASFEGQL KWSRMD TTGCPSGEVQTRLRLGH+REALE+AAKWREI Sbjct: 122 SLASFEGQLSKWSRMDAELIGEYAEGIIVTTGCPSGEVQTRLRLGHDREALESAAKWREI 181 Query: 188 FGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQ 247 GP+N+FLELMDHGL IE+RVREGLL IGRKL IPPLATNDCHYVTR+A NHEALLCVQ Sbjct: 182 VGPDNYFLELMDHGLSIEQRVREGLLNIGRKLNIPPLATNDCHYVTRDAVHNHEALLCVQ 241 Query: 248 TGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDR 307 TGKTLSDP RFKF GDGY+LKSA EMR LWD +VPGACDSTLLI ERVQSYADVWEPR+R Sbjct: 242 TGKTLSDPNRFKFHGDGYYLKSAAEMRQLWDDEVPGACDSTLLIAERVQSYADVWEPRNR 301 Query: 308 MPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIV 367 MPVFPVP GHDQASWL HEV AGL+RRF GP P Y RA YEI VICDKGFP+YFLIV Sbjct: 302 MPVFPVPVGHDQASWLRHEVDAGLKRRFPDGP-PNGYVERAAYEIDVICDKGFPAYFLIV 360 Query: 368 ADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXX 427 ADL+N+ARSVGIRVGPGRGSAAGSL AYALGIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 ADLVNHARSVGIRVGPGRGSAAGSLAAYALGITDIDPIPHGLLFERFLNPERTSMPDIDI 420 Query: 428 XXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKA 487 GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFA+ADRITKA Sbjct: 421 DFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAMADRITKA 480 Query: 488 LPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHA 547 LPP IMAKDIPLSGITDP HER+KEAAEVR LI+TD DVR IY+TARGLEGL+RNAGVHA Sbjct: 481 LPPAIMAKDIPLSGITDPAHERFKEAAEVRSLIETDSDVRIIYQTARGLEGLIRNAGVHA 540 Query: 548 CAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANI 607 CAVI+SSEPL +AIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDAI NI Sbjct: 541 CAVILSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDAIENI 600 Query: 608 KANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLA 667 K NRGI A YELL RGDTLGVFQLDGGPMRDLLRRMQPTGF DIVAVLA Sbjct: 601 KTNRGIDLDLESVPLDDQATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDIVAVLA 660 Query: 668 LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKV 727 LYRPGPMGMNAHNDYADRKN RQ IKPIHPELEEPL++ILAETYGLIVYQEQIM IAQKV Sbjct: 661 LYRPGPMGMNAHNDYADRKNNRQVIKPIHPELEEPLREILAETYGLIVYQEQIMRIAQKV 720 Query: 728 ASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFN 787 A Y++ +AD LRKAMGKKK EVLE E++GF EGM ANGFS A+KALWD ILPFA YAFN Sbjct: 721 AGYSLARADILRKAMGKKKREVLEKEFEGFSEGMQANGFSVHAIKALWDIILPFADYAFN 780 Query: 788 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 847 KSHAAGYGL+SYWTAYLKAN+ EYMAGLLTSVGDDKDKAAVYLADCR+ GITVLPPDVN Sbjct: 781 KSHAAGYGLISYWTAYLKANFAGEYMAGLLTSVGDDKDKAAVYLADCRKFGITVLPPDVN 840 Query: 848 ESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKV 907 ES +FASVG DIR+GLGA+RNVGANVV SLIKTR KGKF DFSDYLNKIDIT+CNKKV Sbjct: 841 ESVLDFASVGADIRYGLGAVRNVGANVVGSLIKTRNAKGKFADFSDYLNKIDITSCNKKV 900 Query: 908 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGTDAVFTI 967 TESLIKAGAFDSLGH RKGLFLVH DAVDSVLGTKKAEA+GQFDLF GG D GTDAVFTI Sbjct: 901 TESLIKAGAFDSLGHSRKGLFLVHADAVDSVLGTKKAEAIGQFDLF-GGTDGGTDAVFTI 959 Query: 968 KVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLV 1027 KVPD+EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IP ILDG V+ND QV V Sbjct: 960 KVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPTILDGGVSNDTQVRV 1019 Query: 1028 GGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXX 1087 GGILA+VNRRVNKNG+PWASAQL+DLTGGIEV+FFP TYS +G Sbjct: 1020 GGILAAVNRRVNKNGIPWASAQLDDLTGGIEVMFFPHTYSSYGADIIDDAVVLVNAKVVV 1079 Query: 1088 XXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRL 1147 RIALIA++L+VPDFS+ Q DRPL+VSL TRQCT DKV ALKQVLA HPGTSQVHLRL Sbjct: 1080 RDDRIALIANQLVVPDFSNVQEDRPLAVSLLTRQCTFDKVNALKQVLARHPGTSQVHLRL 1139 Query: 1148 ISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 ISG+RITTLELDQSLRVT S ALMGDLKALLGPGCLG Sbjct: 1140 ISGDRITTLELDQSLRVTSSPALMGDLKALLGPGCLG 1176 >tr|Q5YYU5|Q5YYU5_NOCFA Tax_Id=37329 (dnaE)SubName: Full=Putative DNA polymerase III alpha subunit;[Nocardia farcinica] Length = 1196 Score = 1864 bits (4828), Expect = 0.0 Identities = 926/1178 (78%), Positives = 1011/1178 (85%), Gaps = 3/1178 (0%) Query: 8 SSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAG 67 SSGSFVHLHNHTEYSMLDGAAKI+P+ EA+RL M A+GMTDHGNM+GASEFYNSA K G Sbjct: 18 SSGSFVHLHNHTEYSMLDGAAKISPLFTEAKRLGMTAVGMTDHGNMYGASEFYNSAKKHG 77 Query: 68 IKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS 127 +KPIIGIEAYIAPGSRFDTKRV WGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS Sbjct: 78 LKPIIGIEAYIAPGSRFDTKRVQWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS 137 Query: 128 SLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREI 187 SLAS EGQLGKW+RMD TTGCPSGEVQTRLRLGHEREALEAAAKW+EI Sbjct: 138 SLASIEGQLGKWARMDAEIIAQHAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQEI 197 Query: 188 FGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQ 247 FGP+NFFLE+MDHGL IERRVREGLL+IGRKLGIPPLATNDCHYV A NHEALLCVQ Sbjct: 198 FGPDNFFLEVMDHGLSIERRVREGLLDIGRKLGIPPLATNDCHYVYESDAANHEALLCVQ 257 Query: 248 TGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDR 307 TGKTLSDPTRFKFDG GY+LKS +EMRA+WD++VPGACD+TLLIGERVQSY VWE RDR Sbjct: 258 TGKTLSDPTRFKFDGSGYYLKSGDEMRAIWDAEVPGACDNTLLIGERVQSYDAVWEHRDR 317 Query: 308 MPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIV 367 MP+FPVPEG QASWL EV GLERRF G VPEEY RAEYE+ VIC+ GFP+YFL+V Sbjct: 318 MPIFPVPEGETQASWLHKEVMRGLERRFPNG-VPEEYLRRAEYELDVICEMGFPAYFLVV 376 Query: 368 ADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXX 427 DLIN+AR VGIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPER S P Sbjct: 377 GDLINHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDI 436 Query: 428 XXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKA 487 GEM+RYA +WGS+RVAQVITFGTIKTKAA+KDSARV FGQPGFAIAD+I+KA Sbjct: 437 DFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQISKA 496 Query: 488 LPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHA 547 LPPPIMAKDIPLSGI DP HERYKEAAEVR LI +PDV IYETARGLEGL+RNAGVHA Sbjct: 497 LPPPIMAKDIPLSGIMDPEHERYKEAAEVRELIANNPDVAKIYETARGLEGLIRNAGVHA 556 Query: 548 CAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANI 607 CAVIMSSEPL+DAIPLWKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDA+ NI Sbjct: 557 CAVIMSSEPLMDAIPLWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALDNI 616 Query: 608 KANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLA 667 KANRGI A YELLSRGDTLGVFQLDG MRDLLRRMQPTGF DIVAVLA Sbjct: 617 KANRGIDLDMDNLPLDDPATYELLSRGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLA 676 Query: 668 LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKV 727 LYRPGPMGMNAHNDYADRKNGRQ +KPIHPELEEPLKDILA+TYGLIVYQEQIM IAQKV Sbjct: 677 LYRPGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKDILADTYGLIVYQEQIMQIAQKV 736 Query: 728 ASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFN 787 A Y++G+AD LR+AMGKKK EVLEAE++GF+ GM NGFS+ A+KALWDTILPFAGYAFN Sbjct: 737 AGYSLGRADILRRAMGKKKAEVLEAEFEGFEAGMLENGFSKPAIKALWDTILPFAGYAFN 796 Query: 788 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 847 KSHAAGYGLVS+WTAYLKANYPAEYMAGLLTSVGDDKDKAAVYL+DCRRLGITVLPPDVN Sbjct: 797 KSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLSDCRRLGITVLPPDVN 856 Query: 848 ESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKV 907 ESE NFASVG DIRFGLGA+RNVGANVV+S+I+ R EK KFTDFSDYLNKID AC KKV Sbjct: 857 ESEQNFASVGKDIRFGLGAVRNVGANVVASIIQARKEKSKFTDFSDYLNKIDAIACTKKV 916 Query: 908 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE-DTGTDAVFT 966 TESLIKAGAFDSLGHPRKGL L+H+DA+D+V+ TKKAEA+GQFDLFGG + D +VF Sbjct: 917 TESLIKAGAFDSLGHPRKGLMLIHSDAIDAVMATKKAEAIGQFDLFGGMDADESVTSVFN 976 Query: 967 IKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVL 1026 +KVPDEEWE KHKLALEREMLGLYVSGHPLNGV H+LA Q DTQIPAIL+GDV + AQV Sbjct: 977 VKVPDEEWETKHKLALEREMLGLYVSGHPLNGVEHVLAAQADTQIPAILEGDVKDGAQVT 1036 Query: 1027 VGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXX 1086 +GGILASVNRR+NKNGL WASAQLEDLTGGIEVLFFPQ YS++G Sbjct: 1037 IGGILASVNRRINKNGLAWASAQLEDLTGGIEVLFFPQAYSVYGADVVEDAVVLVKARVS 1096 Query: 1087 XXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLR 1146 RI+LIA++L VPD S+ +PL+V++ +R CT DK+ LK+VL HPGTS VH+R Sbjct: 1097 VRDDRISLIANDLAVPDLSAIGVAKPLAVTITSRMCTPDKIGELKRVLTRHPGTSDVHVR 1156 Query: 1147 LISG-ERITTLELDQSLRVTPSSALMGDLKALLGPGCL 1183 + ++ T L+L SLRV+PSSAL GDLKALLGP CL Sbjct: 1157 YVGARDKTTMLKLSDSLRVSPSSALFGDLKALLGPSCL 1194 >tr|C1AU36|C1AU36_RHOOB Tax_Id=632772 (dnaE)SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 1178 Score = 1838 bits (4761), Expect = 0.0 Identities = 908/1174 (77%), Positives = 998/1174 (85%), Gaps = 2/1174 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAK+ P+ EA+RLEM A+GMTDHGNM+GASEFYN A K GIKP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVGPLFEEAERLEMSAVGMTDHGNMYGASEFYNVAKKQGIKP 63 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAY+AP SRF+TKRV WGD QK DDVSGSGAYTHMTMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYVAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S EGQLGKW+RMD TTGCPSGE+QTRLRLGH+REALEAAAKW+EI+G Sbjct: 124 SIEGQLGKWARMDEELIATHHEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGK 183 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +NFFLELMDHGL IERRVREGLLEI + LGIPPLATNDCHYVT++AA NHEALLC+QTGK Sbjct: 184 DNFFLELMDHGLSIERRVREGLLEISKTLGIPPLATNDCHYVTKDAAENHEALLCIQTGK 243 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDPTRFKFDGDGYFLKSA EMRALWD QVPGACD+TLLI ERVQSY DVW DRMP+ Sbjct: 244 TLSDPTRFKFDGDGYFLKSAAEMRALWDDQVPGACDNTLLIAERVQSYDDVWAHHDRMPI 303 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPEG Q +WL EV GL+RRF GP PEEY RA+YEI VI + GFP+YFL+V DL Sbjct: 304 FPVPEGETQGTWLRKEVMRGLDRRFPSGP-PEEYLARADYEIGVILEMGFPAYFLVVGDL 362 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 IN+AR VGIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPER S P Sbjct: 363 INHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDIDFD 422 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+RYA ++WGS+RVAQVITFGTIKTKAA+KDSARV FGQPGFAIAD+ITKALPP Sbjct: 423 DRRRGEMVRYATDKWGSDRVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKALPP 482 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDI +SGITDPNHERYKEA EVR LID++PDV IY+TA+GLEGL+RNAGVHACAV Sbjct: 483 PIMAKDISVSGITDPNHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHACAV 542 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMSSEPL+DAIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDAI NIKAN Sbjct: 543 IMSSEPLMDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIDNIKAN 602 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RGI A YELLSRGDTLGVFQLDG MRDLLRRMQPTGF DIVAVLALYR Sbjct: 603 RGIELDLDTLELDDTATYELLSRGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLALYR 662 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMGMNAHNDYADRKNGRQ +KPIHPELEEPLK+ILA+TYGLIVYQEQIM IAQKVA Y Sbjct: 663 PGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKEILADTYGLIVYQEQIMQIAQKVAGY 722 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 ++G+AD LR+AMGKKKL VLE Y GF+EGM AN FSE A+KALWDTILPFAGYAFNKSH Sbjct: 723 SLGQADILRRAMGKKKLSVLEEAYAGFREGMLANEFSEPAIKALWDTILPFAGYAFNKSH 782 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 AAGYGLVS+WT YLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR++GITVLPPDVNESE Sbjct: 783 AAGYGLVSFWTGYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKMGITVLPPDVNESE 842 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 NFASVG+DIRFG+GA+RNVGANVV S+IK R EK KF DFSDYLNKID AC+KKVTES Sbjct: 843 VNFASVGEDIRFGMGAVRNVGANVVGSIIKARKEKSKFVDFSDYLNKIDAAACSKKVTES 902 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE-DTGTDAVFTIKV 969 LIKAG FDSLGHPRKGL LVH DA+D+V+GTKKAEA+GQFDLFGG + D +VF +K+ Sbjct: 903 LIKAGGFDSLGHPRKGLMLVHADAIDAVMGTKKAEAIGQFDLFGGDDADESIASVFNVKI 962 Query: 970 PDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLVGG 1029 P+EEW+ KH+LALEREMLGLYVSGHPLNGV H+L+ Q DT IP IL+GD+ + QV VGG Sbjct: 963 PEEEWDSKHRLALEREMLGLYVSGHPLNGVEHVLSAQSDTAIPTILEGDIKDGTQVTVGG 1022 Query: 1030 ILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXXXX 1089 ILASVNRR+NKNGL WASAQLEDLTGGIEVLFFPQ YS++G Sbjct: 1023 ILASVNRRINKNGLTWASAQLEDLTGGIEVLFFPQAYSVYGMDVTEDSVVLVKARVSIRD 1082 Query: 1090 XRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRLIS 1149 RI+LIA++L VPD S+ +PL+VSLP RQCT DK+ AL+QVL HPGTS VH+RLI Sbjct: 1083 DRISLIANDLAVPDLSAVGVAKPLAVSLPLRQCTKDKLGALRQVLTRHPGTSDVHVRLIG 1142 Query: 1150 GERITTLELDQSLRVTPSSALMGDLKALLGPGCL 1183 G +T ++D LRV PSSALMGDLKALLGP CL Sbjct: 1143 GTEVTLWKVDDVLRVEPSSALMGDLKALLGPSCL 1176 >tr|Q0SHU0|Q0SHU0_RHOSR Tax_Id=101510 (dnaE1)SubName: Full=DNA-directed DNA polymerase III alpha subunit; EC=2.7.7.7;[Rhodococcus sp.] Length = 1178 Score = 1836 bits (4755), Expect = 0.0 Identities = 908/1174 (77%), Positives = 996/1174 (84%), Gaps = 2/1174 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAK+ P+ EA+RL M A+GMTDHGNM+GASEFYN A K GIKP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVGPLFEEAERLGMSAVGMTDHGNMYGASEFYNEAKKQGIKP 63 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAYIAP SRF+TKRV WGD QK DDVSGSGAYTHMTMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S EGQLGKW+RMD TTGCPSGE+QTRLRLGH+REALEAAAKW+EI+G Sbjct: 124 SIEGQLGKWARMDEELIATHHEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGK 183 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +NFFLELMDHGL IERRVREGLLEI +KL IPPLATNDCHYVT+EAA NHEALLC+QTGK Sbjct: 184 DNFFLELMDHGLSIERRVREGLLEISKKLEIPPLATNDCHYVTKEAAENHEALLCIQTGK 243 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDPTRFKFDGDGY+LK A EMRALWD QVPGACD+TLLI ERVQSY DVW DRMP+ Sbjct: 244 TLSDPTRFKFDGDGYYLKPAAEMRALWDDQVPGACDNTLLIAERVQSYDDVWAHHDRMPI 303 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPEG Q +WL EV GL+RRF GP PEEY RA+YEI VI + GFP+YFL+V DL Sbjct: 304 FPVPEGETQGTWLRKEVMRGLDRRFPDGP-PEEYLARADYEIGVILEMGFPAYFLVVGDL 362 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 IN+AR VGIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPER S P Sbjct: 363 INHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDIDFD 422 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+RYA ++WGS+RVAQVITFGTIKTKAA+KDSARV FGQPGFAIAD+ITKALPP Sbjct: 423 DRRRGEMVRYATDKWGSDRVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKALPP 482 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDI +SGITDPNHERYKEA EVR LID++PDV IY+TA+GLEGL+RNAGVHACAV Sbjct: 483 PIMAKDISVSGITDPNHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHACAV 542 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMSSEPL+DAIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDAI NIKAN Sbjct: 543 IMSSEPLMDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIDNIKAN 602 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RGI A YELLSRGDTLGVFQLDG MRDLLRRMQPTGF DIVAVLALYR Sbjct: 603 RGIDLDLDTLALDDQATYELLSRGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLALYR 662 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMGMNAHNDYADRKNGRQ +KPIHPELEEPLK+ILA+TYGLIVYQEQIM IAQKVA Y Sbjct: 663 PGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKEILADTYGLIVYQEQIMQIAQKVAGY 722 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 ++G+AD LR+AMGKKKL VLE Y GF+EGM AN FSE A+KALWDTILPFAGYAFNKSH Sbjct: 723 SLGQADILRRAMGKKKLSVLEEAYAGFREGMLANEFSEPAIKALWDTILPFAGYAFNKSH 782 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 AAGYGLVS+WT YLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR++GITVLPPDVNESE Sbjct: 783 AAGYGLVSFWTGYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKMGITVLPPDVNESE 842 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 NFASVG+DIRFG+GA+RNVGANVV S+IK R EK KF DFSDYLNKID AC+KKVTES Sbjct: 843 VNFASVGEDIRFGMGAVRNVGANVVGSIIKARKEKSKFVDFSDYLNKIDAAACSKKVTES 902 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE-DTGTDAVFTIKV 969 LIKAG FDSLGHPRKGL LVH DA+D+V+GTKKAEA+GQFDLFGG + D +VF +K+ Sbjct: 903 LIKAGGFDSLGHPRKGLMLVHADAIDAVMGTKKAEAIGQFDLFGGDDADESISSVFNVKI 962 Query: 970 PDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLVGG 1029 PDEEW+ KH+LALEREMLGLYVSGHPLNGV H+L+ Q DT IP IL+GD+ + QV VGG Sbjct: 963 PDEEWDSKHRLALEREMLGLYVSGHPLNGVEHVLSAQSDTAIPTILEGDIKDGTQVTVGG 1022 Query: 1030 ILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXXXX 1089 ILASVNRR+NKNGL WASAQLEDLTGGIEVLFFPQ YS++G Sbjct: 1023 ILASVNRRINKNGLTWASAQLEDLTGGIEVLFFPQAYSVYGMDVTEDSVVLVKARVSIRD 1082 Query: 1090 XRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRLIS 1149 RI+LIA++L VPD S+ +PL+VSLP RQCT DK+ AL+QVL HPGTS VH+RLI Sbjct: 1083 DRISLIANDLAVPDLSAVGVAKPLAVSLPLRQCTKDKLGALRQVLTRHPGTSDVHVRLIG 1142 Query: 1150 GERITTLELDQSLRVTPSSALMGDLKALLGPGCL 1183 G +T ++D LRV PSSALMGDLKALLGP CL Sbjct: 1143 GTEVTLWKVDDVLRVEPSSALMGDLKALLGPSCL 1176 >tr|D5PP16|D5PP16_COREQ Tax_Id=525370 (dnaE)SubName: Full=DNA-directed DNA polymerase III alpha subunit; EC=2.7.7.7;[Rhodococcus equi ATCC 33707] Length = 1178 Score = 1821 bits (4717), Expect = 0.0 Identities = 894/1174 (76%), Positives = 998/1174 (85%), Gaps = 2/1174 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAK+ P+ EA+RL M A+GMTDHGNM+GASEFYNSA K GIKP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVGPLFKEAERLGMTAVGMTDHGNMYGASEFYNSAKKHGIKP 63 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAY+AP SRF+TKRV WGDP QK DDVSGSGAYTHMTMVAEN+TGLRNLFKLSSLA Sbjct: 64 IIGIEAYVAPESRFNTKRVLWGDPSQKSDDVSGSGAYTHMTMVAENSTGLRNLFKLSSLA 123 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S EGQLGKW RMD TTGCPSGE+QTRLRLGH+REALEAAAKW+EI+G Sbjct: 124 SIEGQLGKWPRMDEELIATHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGK 183 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +NFFLELMDHGL IERRVREGLL IGR+LGIPPLATNDCHYVT++AA NHEALLC+QTGK Sbjct: 184 DNFFLELMDHGLSIERRVREGLLSIGRQLGIPPLATNDCHYVTKDAAENHEALLCIQTGK 243 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDPTRFKFDGDGY+LKSAEEMRA+WDS+VPGACD+++LIGERVQ Y DVW+ RDRMP+ Sbjct: 244 TLSDPTRFKFDGDGYYLKSAEEMRAIWDSEVPGACDNSVLIGERVQPYEDVWQHRDRMPI 303 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPEG QASWL EV GL+RRF GP P EY RAEYEI VI GFP+YFL+V DL Sbjct: 304 FPVPEGETQASWLHKEVMRGLDRRFPAGP-PREYIERAEYEIGVINQMGFPAYFLVVGDL 362 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 IN+AR VGIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPER S P Sbjct: 363 INHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDIDFD 422 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+RYA ++WGS++VAQVITFGTIKTKAA+KDSARV FGQPGFAIAD+ITKALPP Sbjct: 423 DRRRGEMVRYATDKWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKALPP 482 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDI +SGITDP HERYKEA EVR LID++PDV IY+TA+GLEGL+RNAGVHACAV Sbjct: 483 PIMAKDISVSGITDPEHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHACAV 542 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMSSEPL DAIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDAI NIKAN Sbjct: 543 IMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIENIKAN 602 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RG+ A YELL+RGDTLGVFQLDG MRDLLRRMQPTGF DIVAVLALYR Sbjct: 603 RGVDIDLDTLPLEDPATYELLARGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLALYR 662 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMGMNAHNDYADRKNGRQ +KPIHPELEEPLK+ILA+T+GLIVYQEQIM IAQKVA Y Sbjct: 663 PGPMGMNAHNDYADRKNGRQDVKPIHPELEEPLKEILADTFGLIVYQEQIMQIAQKVAGY 722 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 ++G+AD LR+AMGKKK E+L+ Y GF EGM ANGFS+ A+ ALWDT+LPFAGYAFNKSH Sbjct: 723 SLGQADLLRRAMGKKKKEILDEAYDGFAEGMKANGFSQAAITALWDTVLPFAGYAFNKSH 782 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 AAGYGLVS+WTAYLKANYP+EYMAGLLTSVGDDKDKAAVYL+DCR++GITVLPPDVN S Sbjct: 783 AAGYGLVSFWTAYLKANYPSEYMAGLLTSVGDDKDKAAVYLSDCRKMGITVLPPDVNASR 842 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 +FASVG+DIRFGLGA+RNVGANVV S+I R EKG FTDFSDYLNKID AC+KKVTES Sbjct: 843 VDFASVGEDIRFGLGAVRNVGANVVGSIIAAREEKGSFTDFSDYLNKIDALACSKKVTES 902 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE-DTGTDAVFTIKV 969 LIKAG FDSLGHPRKGL LVH DA+D+V+GTKKAEAMGQFDLFGG + D +VF +KV Sbjct: 903 LIKAGGFDSLGHPRKGLMLVHADAIDAVMGTKKAEAMGQFDLFGGDDADESITSVFNVKV 962 Query: 970 PDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLVGG 1029 PDEEW+ KHKLALEREMLGLYVSGHPLNGV H+LA Q DT IP IL+GD+ + QV VGG Sbjct: 963 PDEEWDSKHKLALEREMLGLYVSGHPLNGVEHVLAAQSDTSIPVILEGDIKDGTQVTVGG 1022 Query: 1030 ILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXXXX 1089 ILASVNRR+NKNGL WASAQLEDL+GGIEVLFFPQ YS++G Sbjct: 1023 ILASVNRRINKNGLTWASAQLEDLSGGIEVLFFPQAYSVYGMDVVEDSVVLVKARVSIRD 1082 Query: 1090 XRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRLIS 1149 R++LIA++L VPD S+ +P+SVSLP RQCT +K+ AL+QVL+ HPGT+ VH++LI Sbjct: 1083 DRVSLIANDLAVPDLSAIGVAKPVSVSLPVRQCTKEKLGALRQVLSKHPGTADVHVKLIG 1142 Query: 1150 GERITTLELDQSLRVTPSSALMGDLKALLGPGCL 1183 + ++D+ LRV PSS+LMGDLKALLGP CL Sbjct: 1143 SRGTSLWKVDEVLRVEPSSSLMGDLKALLGPSCL 1176 >tr|D0LAQ8|D0LAQ8_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase III, alpha subunit;[Gordonia bronchialis] Length = 1180 Score = 1777 bits (4603), Expect = 0.0 Identities = 880/1177 (74%), Positives = 985/1177 (83%), Gaps = 3/1177 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAK+ P+ AEA+RL M AIGMTDHGNMFGASEFYN+A K IKP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVAPLFAEAKRLGMTAIGMTDHGNMFGASEFYNTAVKNDIKP 63 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAY+AP SRF+TKRVTWG QK DDVSGSGAYTHMTMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYVAPASRFETKRVTWGTRDQKDDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S EGQLGKW+RMD TTGCPSGEVQTRLRLGHEREALEAAAKW+EIFG Sbjct: 124 SIEGQLGKWARMDADIIAEYAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQEIFGK 183 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 ENF+LELM+HGL+IERRVR+GLLE+GRKLGI PL TNDCHYVT++ A++HEALLCVQTGK Sbjct: 184 ENFYLELMEHGLEIERRVRDGLLEVGRKLGIKPLVTNDCHYVTKDHAKSHEALLCVQTGK 243 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDPTRFKFDGDGY+LKSA EMR LWDS VPGACD+TL IGERVQSYADV+ RDRMPV Sbjct: 244 TLSDPTRFKFDGDGYYLKSAAEMRELWDSVVPGACDNTLEIGERVQSYADVFTHRDRMPV 303 Query: 311 FPVPEGHDQASWLTHEVKAGL-ERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVAD 369 FPVPEG Q +WL EV GL ERRF G VP EY RA YE+ VI GFP+YFL+V D Sbjct: 304 FPVPEGESQQTWLRKEVAKGLAERRFAGAEVPREYQERANYELDVIIQMGFPAYFLVVGD 363 Query: 370 LINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXX 429 LI +A+ VGIRVGPGRGSAAGSLVA+ALGITNIDPIPHGLLFERFLNPER S P Sbjct: 364 LIRHAQEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDIDIDF 423 Query: 430 XXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALP 489 GEM+RYA +RWGS++VAQVITFGTIKTKAA+KDSARV FGQPGF+IADRITKALP Sbjct: 424 DDRRRGEMVRYATDRWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGFSIADRITKALP 483 Query: 490 PPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACA 549 PPIMAKDIP+ GITDP+HER+ EAAEVR LI+TDPDV+ IY+TA GLEGL+RNAGVHACA Sbjct: 484 PPIMAKDIPVWGITDPDHERFNEAAEVRSLIETDPDVKKIYDTALGLEGLIRNAGVHACA 543 Query: 550 VIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKA 609 VIMSSEPL DAIP+W+R QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDAI NIK Sbjct: 544 VIMSSEPLTDAIPVWRRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIENIKI 603 Query: 610 NRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALY 669 NRG YELL+RGDTLGVFQLDGG MR+LL+RMQPTGF DIVAVLALY Sbjct: 604 NRGFDLDLDDAPLDDPKTYELLARGDTLGVFQLDGGAMRELLKRMQPTGFEDIVAVLALY 663 Query: 670 RPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVAS 729 RPGPMGMNAHNDYADRKNGRQ +KPIHPEL EPLK+ILA+TYGLIVYQEQIM IAQKVA Sbjct: 664 RPGPMGMNAHNDYADRKNGRQEVKPIHPELAEPLKEILADTYGLIVYQEQIMQIAQKVAG 723 Query: 730 YTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKS 789 Y++G+AD LR+AMGKKK EVL AE++GF+ GM ANGFS A+KALWDTILPFAGYAFNKS Sbjct: 724 YSLGRADILRRAMGKKKAEVLAAEFEGFEAGMKANGFSGPAIKALWDTILPFAGYAFNKS 783 Query: 790 HAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNES 849 HAAGYGLVS+WTAYLKANYPAEYMAGLLTSVGDDKDKAA+YLADCR+LGITVLPPDVNES Sbjct: 784 HAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLADCRKLGITVLPPDVNES 843 Query: 850 EHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTE 909 + NFA+VG DIRFGL AIRNVG+ VVSS++ R EKGKFT FSDYL KID+TACNKKVTE Sbjct: 844 QRNFAAVGTDIRFGLAAIRNVGSGVVSSILAAREEKGKFTSFSDYLGKIDVTACNKKVTE 903 Query: 910 SLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFG--GGEDTGTDAVFTI 967 SLIKAGAFDSL HPRKGLFLVH +AV+SVLGTKKAEA+GQFDLFG GG D VF + Sbjct: 904 SLIKAGAFDSLAHPRKGLFLVHGEAVESVLGTKKAEAIGQFDLFGDAGGADDTMAEVFAV 963 Query: 968 KVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLV 1027 KVPDEEW+ KHKLA+EREMLGLYVSGHPL+GV H +A DT I +L+G++A+ AQ+ + Sbjct: 964 KVPDEEWDTKHKLAIEREMLGLYVSGHPLSGVEHAIAAHTDTSITTLLEGNIADGAQITI 1023 Query: 1028 GGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXX 1087 GGI++SV RRVNK G PWA+ LED+ GG+EV FFP+ ++ +G Sbjct: 1024 GGIISSVTRRVNKKGEPWAAVTLEDMVGGVEVYFFPRAFAAYGMDIVADNIVLIKARVNL 1083 Query: 1088 XXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRL 1147 + + A++L VPD SSA A +P++++L R CT D+V ALKQVL HPG++ VH+ L Sbjct: 1084 RDDSMMISANDLAVPDLSSAGATKPVALTLSARLCTPDRVQALKQVLTRHPGSADVHVTL 1143 Query: 1148 ISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 +S ER T L L +SLRVTPSSALMGDLKALLGP CLG Sbjct: 1144 VSDERQTQLRLTESLRVTPSSALMGDLKALLGPSCLG 1180 >tr|C3JJ26|C3JJ26_RHOER Tax_Id=596309 SubName: Full=DNA polymerase III, alpha subunit family; EC=2.7.7.7;[Rhodococcus erythropolis SK121] Length = 1178 Score = 1777 bits (4602), Expect = 0.0 Identities = 875/1174 (74%), Positives = 983/1174 (83%), Gaps = 2/1174 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAK+ M EA RLEM A+GMTDHGNM+GAS+FYN A AGIKP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVGAMFEEAARLEMTAVGMTDHGNMYGASQFYNEAKSAGIKP 63 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAYIAP SRF+TKRV WGD QK DDVSGSGAYTHMTMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S EGQLGKW RMD TTGCPSGE+QTRLRLGH+REALEAAAKW+EI+GP Sbjct: 124 SIEGQLGKWPRMDEELIAAHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGP 183 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +NFFLELMDHGL IERRVREGLL+IG++LGIPPLATNDCHYVT++AA NHEALLC+QTGK Sbjct: 184 DNFFLELMDHGLSIERRVREGLLDIGKQLGIPPLATNDCHYVTKDAAENHEALLCIQTGK 243 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDPTRFKFDGDGY+LKSA EMRA+WD++VPGACD+T+ IGERVQSY DVW DRMP+ Sbjct: 244 TLSDPTRFKFDGDGYYLKSAAEMRAIWDNEVPGACDNTVAIGERVQSYEDVWAFHDRMPI 303 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPEGH Q ++L EV GL+RRF GP P+EY RA+YEI VI + GFP+YFL+V DL Sbjct: 304 FPVPEGHTQQTFLRAEVMRGLDRRFPSGP-PQEYLARADYEIGVINEMGFPAYFLVVGDL 362 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 IN+A+ VGIRVGPGRGSAAGSLVAYA+GITNIDPIP+GLLFERFLNPER S P Sbjct: 363 INHAKDVGIRVGPGRGSAAGSLVAYAMGITNIDPIPYGLLFERFLNPERVSMPDIDIDFD 422 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+RYA ++WG+++VAQVITFGTIKTKAA+KDSARV FG+PGFAIAD+ITKALPP Sbjct: 423 DRRRGEMVRYATDKWGNDKVAQVITFGTIKTKAAIKDSARVQFGKPGFAIADQITKALPP 482 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDI +SGITDP HERYKEA EVR LID+ PDV IY+TA GLEGL+RNAGVHACAV Sbjct: 483 PIMAKDISVSGITDPKHERYKEAVEVRALIDSSPDVAKIYKTAVGLEGLIRNAGVHACAV 542 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMSSEPL DAIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGD + NIKAN Sbjct: 543 IMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDTLENIKAN 602 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RGI A YELL+RGDTLGVFQLDGG MR+LL+ MQPTGF DIVA LALYR Sbjct: 603 RGIDLDLDTLPMDDAATYELLARGDTLGVFQLDGGGMRELLKLMQPTGFGDIVAALALYR 662 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMG++AH YA RKN + +KPIHPELEEPL +IL+ETYGLI+YQEQIM +AQKVA Y Sbjct: 663 PGPMGVDAHISYAKRKNALEDVKPIHPELEEPLAEILSETYGLIIYQEQIMQLAQKVAGY 722 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 T+G+AD LR+AMGKKKL LE Y GF++GM N FSE A+KALWDT+LPFAGYAFNKSH Sbjct: 723 TLGQADLLRRAMGKKKLSELEKAYAGFRQGMLDNNFSEAAIKALWDTVLPFAGYAFNKSH 782 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 +AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDK+A+YLADCR+LGITVLPPDVNES Sbjct: 783 SAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKSAIYLADCRKLGITVLPPDVNESR 842 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 +FA+VGDDIRFG+G++RNVGANVV+S+IK RTEK KFTDFSDYL KID ACNKKVTES Sbjct: 843 VDFATVGDDIRFGMGSVRNVGANVVASIIKARTEKSKFTDFSDYLGKIDAMACNKKVTES 902 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE-DTGTDAVFTIKV 969 LIKAGAFDSLGHPRKGL LVH DA+DSV+ TKKAEA+GQFDLFGG E D +VF +K+ Sbjct: 903 LIKAGAFDSLGHPRKGLMLVHADAIDSVMSTKKAEAIGQFDLFGGAEADESITSVFDVKI 962 Query: 970 PDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLVGG 1029 PDEEW+ KH+LALEREMLGLYVSGHPLNGV H+L Q DT I AIL+G V + AQV +GG Sbjct: 963 PDEEWDSKHRLALEREMLGLYVSGHPLNGVEHILRQQSDTSIAAILEGGVQDGAQVTLGG 1022 Query: 1030 ILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXXXX 1089 I+ASV+RRVNKNGL W QLEDL GGIEVLFFPQ Y+++G Sbjct: 1023 IIASVDRRVNKNGLTWCIVQLEDLVGGIEVLFFPQAYAVYGMDIAEDAIVLVKARVSIRD 1082 Query: 1090 XRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRLIS 1149 R++LI ++L VPD S+ RPLSVSLP RQCT DK++ALKQVL HPGTS VH+RLI Sbjct: 1083 DRMSLIGNDLAVPDISAIGVARPLSVSLPLRQCTKDKLSALKQVLTRHPGTSDVHVRLIG 1142 Query: 1150 GERITTLELDQSLRVTPSSALMGDLKALLGPGCL 1183 G I+ ++D LRV PSSALMGDLKALLGP CL Sbjct: 1143 GTEISLWKVDDVLRVEPSSALMGDLKALLGPSCL 1176 >tr|C1A0V4|C1A0V4_RHOE4 Tax_Id=234621 (dnaE)SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 1202 Score = 1775 bits (4598), Expect = 0.0 Identities = 874/1174 (74%), Positives = 983/1174 (83%), Gaps = 2/1174 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAK+ M EA RLEM A+GMTDHGNM+GAS+FYN A AGIKP Sbjct: 28 SFVHLHNHTEYSMLDGAAKVGAMFEEAARLEMTAVGMTDHGNMYGASQFYNEAKSAGIKP 87 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAYIAP SRF+TKRV WGD QK DDVSGSGAYTHMTMVAENATGLRNLFKLSSLA Sbjct: 88 IIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 147 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S EGQLGKW RMD TTGCPSGE+QTRLRLGH+REALEAAAKW+EI+GP Sbjct: 148 SIEGQLGKWPRMDEELIAAHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGP 207 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +NFFLELMDHGL IERRVREGLL+IG++LGIPPLATNDCHYVT++AA NHEALLC+QTGK Sbjct: 208 DNFFLELMDHGLSIERRVREGLLDIGKQLGIPPLATNDCHYVTKDAAENHEALLCIQTGK 267 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDPTRFKFDGDGY+LKSA EMRA+WD++VPGACD+T+ IGERVQSY DVW DRMP+ Sbjct: 268 TLSDPTRFKFDGDGYYLKSAAEMRAIWDNEVPGACDNTVAIGERVQSYEDVWAFHDRMPI 327 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPEGH Q ++L EV GL+RRF GP P+EY RA+YEI VI + GFP+YFL+V DL Sbjct: 328 FPVPEGHTQQTFLRAEVMRGLDRRFPSGP-PQEYLARADYEIGVINEMGFPAYFLVVGDL 386 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 IN+A+ VGIRVGPGRGSAAGSLVAYA+GITNIDPIP+GLLFERFLNPER S P Sbjct: 387 INHAKDVGIRVGPGRGSAAGSLVAYAMGITNIDPIPYGLLFERFLNPERVSMPDIDIDFD 446 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+RYA ++WG+++VAQVITFGTIKTKAA+KDSARV FG+PGFAIAD+ITKALPP Sbjct: 447 DRRRGEMVRYATDKWGNDKVAQVITFGTIKTKAAIKDSARVQFGKPGFAIADQITKALPP 506 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDI +SGITDP HERYKEA EVR LID+ PDV IY+TA GLEGL+RNAGVHACAV Sbjct: 507 PIMAKDISVSGITDPKHERYKEAVEVRALIDSSPDVAKIYKTAVGLEGLIRNAGVHACAV 566 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMSSEPL DAIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGD + NIKAN Sbjct: 567 IMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDTLENIKAN 626 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RGI A YELL+RGDTLGVFQLDGG MR+LL+ MQPTGF DIVA LALYR Sbjct: 627 RGIDLDLDTLPMDDAATYELLARGDTLGVFQLDGGGMRELLKLMQPTGFGDIVAALALYR 686 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMG++AH YA RKN + +KPIHPELEEPL +IL+ETYGLI+YQEQIM +AQKVA Y Sbjct: 687 PGPMGVDAHISYAKRKNALEDVKPIHPELEEPLAEILSETYGLIIYQEQIMQLAQKVAGY 746 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 T+G+AD LR+AMGKKKL LE Y GF++GM N FSE A+KALWDT+LPFAGYAFNKSH Sbjct: 747 TLGQADLLRRAMGKKKLSELEKAYAGFRQGMLDNNFSEAAIKALWDTVLPFAGYAFNKSH 806 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 +AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDK+A+YLADCR+LGITVLPPDVNES Sbjct: 807 SAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKSAIYLADCRKLGITVLPPDVNESR 866 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 +FA+VGDDIRFG+G++RNVGANVV+S+IK RTEK KFTDFSDYL KID ACNKKVTES Sbjct: 867 VDFATVGDDIRFGMGSVRNVGANVVASIIKARTEKSKFTDFSDYLGKIDAMACNKKVTES 926 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGE-DTGTDAVFTIKV 969 LIKAGAFDSLGHPRKGL LVH DA+DSV+ TKKAEA+GQFDLFGG E D +VF +K+ Sbjct: 927 LIKAGAFDSLGHPRKGLMLVHADAIDSVMSTKKAEAIGQFDLFGGAEADESITSVFDVKI 986 Query: 970 PDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVLVGG 1029 P+EEW+ KH+LALEREMLGLYVSGHPLNGV H+L Q DT I AIL+G V + AQV +GG Sbjct: 987 PEEEWDSKHRLALEREMLGLYVSGHPLNGVEHILRQQSDTSIAAILEGGVQDGAQVTLGG 1046 Query: 1030 ILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXXXXXX 1089 I+ASV+RRVNKNGL W QLEDL GGIEVLFFPQ Y+++G Sbjct: 1047 IIASVDRRVNKNGLTWCIVQLEDLVGGIEVLFFPQAYAVYGMDIAEDAIVLVKARVSIRD 1106 Query: 1090 XRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHLRLIS 1149 R++LI ++L VPD S+ RPLSVSLP RQCT DK++ALKQVL HPGTS VH+RLI Sbjct: 1107 DRMSLIGNDLAVPDISAIGVARPLSVSLPLRQCTKDKLSALKQVLTRHPGTSDVHVRLIG 1166 Query: 1150 GERITTLELDQSLRVTPSSALMGDLKALLGPGCL 1183 G I+ ++D LRV PSSALMGDLKALLGP CL Sbjct: 1167 GTEISLWKVDDVLRVEPSSALMGDLKALLGPSCL 1200 >tr|D5US18|D5US18_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, alpha subunit;[Tsukamurella paurometabola DSM 20162] Length = 1183 Score = 1750 bits (4532), Expect = 0.0 Identities = 867/1178 (73%), Positives = 979/1178 (83%), Gaps = 6/1178 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDGAAK+ P+ AEA+RL M A+GM+DHGNMFGAS+FYN+A K IKP Sbjct: 6 SFVHLHNHTEYSMLDGAAKVDPLFAEAKRLGMTAVGMSDHGNMFGASDFYNTAVKYDIKP 65 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAYIAP SRF+TKRV WGDP QK DDVSGSGAYTHMTMVAENATGLRNLFKLSSLA Sbjct: 66 IIGIEAYIAPESRFNTKRVRWGDPSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 125 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S EGQLGKWSRMD TTGCPSGEVQTRLRLGHE+EALEAAAKW+EIFG Sbjct: 126 SIEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHEQEALEAAAKWQEIFGK 185 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 ENF+LELMDHG+DIERRVREGLLEIGRKLGI PLATNDCHYVT++ A +H ALLC+QTGK Sbjct: 186 ENFYLELMDHGIDIERRVREGLLEIGRKLGIKPLATNDCHYVTKDKAESHGALLCIQTGK 245 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPRDRMPV 310 TLSDPTRF+FDGDGY+LKSA+EMR LWD+QVPGACDST+ IGERVQSY +VWE +DRMP Sbjct: 246 TLSDPTRFQFDGDGYYLKSAQEMRELWDAQVPGACDSTVEIGERVQSYKEVWEHKDRMPR 305 Query: 311 FPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVADL 370 FPVPE H Q S+L EV GL RRF GP P +Y RA YE+ VI + GFP+YFL+V DL Sbjct: 306 FPVPENHTQESFLESEVMDGLNRRFPDGP-PPDYVERARYELSVINEMGFPAYFLVVGDL 364 Query: 371 INYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXXXX 430 I +A VGIRVGPGRGSAAGSLVA+ALGITNIDPIPHGLLFERFLNPER S P Sbjct: 365 IAHAHEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDIDIDFD 424 Query: 431 XXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKALPP 490 GEM+ YA+ +WGS++VAQVITFGTIKTKAA+KDSARV +GQPG++IADRITKALPP Sbjct: 425 DRRRGEMITYASEKWGSDKVAQVITFGTIKTKAAIKDSARVIYGQPGYSIADRITKALPP 484 Query: 491 PIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAV 550 PIMAKDI + GITDP HERYKEA EVR LI+TDPDV+ IY+ A GLEGL+RNAGVHACAV Sbjct: 485 PIMAKDISVKGITDPAHERYKEAVEVRQLIETDPDVKKIYDMALGLEGLIRNAGVHACAV 544 Query: 551 IMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIKAN 610 IMS +PL DAIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDA+ANIK N Sbjct: 545 IMSCDPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALANIKHN 604 Query: 611 RGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALYR 670 RGI Y+LL RG+TLGVFQLDGGPMRDLLRRMQPT F DIVAV ALYR Sbjct: 605 RGIDLDMDQLPLDDETTYQLLQRGNTLGVFQLDGGPMRDLLRRMQPTKFEDIVAVGALYR 664 Query: 671 PGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVASY 730 PGPMG+NAHNDYADRKNGRQ +KPIHPELEEPL +IL+ET+GLIVYQEQIM IAQKVA Y Sbjct: 665 PGPMGVNAHNDYADRKNGRQQVKPIHPELEEPLAEILSETFGLIVYQEQIMQIAQKVAGY 724 Query: 731 TMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNKSH 790 ++G+AD LR+AMGKKK E+L+ Y GF++GM NGFS+ A+ ALW+T+LPFAGYAFNKSH Sbjct: 725 SLGQADLLRRAMGKKKKEILDEAYGGFQQGMLDNGFSQPAITALWETVLPFAGYAFNKSH 784 Query: 791 AAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESE 850 AA YGLVSYWTAYLKANYPAEYMA LLTSVGDDKDKAA+YL DCRRLGITVLPPDVNES Sbjct: 785 AAAYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKAAIYLGDCRRLGITVLPPDVNESF 844 Query: 851 HNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVTES 910 H F SVG+DIRFG+G++RNVG VV+S++ TR EKG FT FSDYL KI++ AC+KKVTES Sbjct: 845 HAFTSVGEDIRFGMGSVRNVGEGVVASIVNTREEKGNFTSFSDYLAKIEVAACSKKVTES 904 Query: 911 LIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFG--GGEDTGT---DAVF 965 LIKAG FDSL HPRKGLFLVH+DA++SVL TKKAEA+GQFDLFG G E GT D VF Sbjct: 905 LIKAGGFDSLEHPRKGLFLVHSDAIESVLSTKKAEAVGQFDLFGSMGDEGGGTEPIDDVF 964 Query: 966 TIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQV 1025 TIKVPDEEW+ KHKLALEREMLGLYVS HPL+GV H++A Q DT IPAI++GDV + QV Sbjct: 965 TIKVPDEEWDGKHKLALEREMLGLYVSAHPLDGVEHVIAAQTDTPIPAIVEGDVKDGTQV 1024 Query: 1026 LVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGXXXXXXXXXXXXXXX 1085 VGGIL SVNRRVNKNG P+ASAQ+EDL+GGIEV FFPQ Y+ +G Sbjct: 1025 TVGGILQSVNRRVNKNGAPFASAQIEDLSGGIEVFFFPQAYAAYGAEVVEDAVVLIKARV 1084 Query: 1086 XXXXXRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHL 1145 ++ LIA+++ D S +PLS+++PTR CT DKV+ALKQVL HPG S VH+ Sbjct: 1085 NFRDDKVTLIANDIAPIDLSQIGVAKPLSLTMPTRICTHDKVSALKQVLQRHPGVSDVHV 1144 Query: 1146 RLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCL 1183 +L+SG++ TTL LD +LRV SS+LMGDLKALLGP CL Sbjct: 1145 KLVSGDKATTLRLDDTLRVNQSSSLMGDLKALLGPNCL 1182 >tr|Q8FNW4|Q8FNW4_COREF Tax_Id=152794 SubName: Full=Putative DNA polymerase III alpha subunit;[Corynebacterium efficiens] Length = 1204 Score = 1561 bits (4042), Expect = 0.0 Identities = 783/1183 (66%), Positives = 911/1183 (77%), Gaps = 9/1183 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDG AKI + E R +MPA+G+TDHGNM+G++ FY T+AG+KP Sbjct: 22 SFVHLHNHTEYSMLDGMAKIDMLADEVNRQQMPAVGITDHGNMYGSNAFYRKMTEAGVKP 81 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAY+AP SRF+ +RV WG+P QK DDVS SGAY H TM+AENATGLRNLF LSS+A Sbjct: 82 IIGIEAYLAPESRFNKERVRWGEPHQKSDDVSASGAYLHQTMLAENATGLRNLFYLSSMA 141 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S+EGQLGKW RMD TTGCPSG+VQTRLRLG EALEAAA W++I+G Sbjct: 142 SYEGQLGKWPRMDAEIIAERAEGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQDIYGR 201 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +N+FLELMDHGLDIE RVR LLEIGRKL +PPL TNDCHYV A+ HEA+LCVQTGK Sbjct: 202 DNYFLELMDHGLDIENRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGK 261 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWE--PRDRM 308 TL D RFKFDG GY++K+AE+MR+LWD VP CD+TL I ERVQ Y ++WE P DRM Sbjct: 262 TLHDEDRFKFDGSGYYIKTAEQMRSLWDDTVPDGCDNTLWIAERVQDYGEIWEEHPHDRM 321 Query: 309 PVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVA 368 PV VPEGH SWL HEV AGLE RF G VP+EY RAEYEI VI KG+PSYFLIVA Sbjct: 322 PVADVPEGHTPTSWLHHEVMAGLEDRFPGQQVPQEYIERAEYEISVIDMKGYPSYFLIVA 381 Query: 369 DLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXX 428 ++I +ARS+GI VGPGRGSAAG+LVAYAL ITNIDPI HGLLFERFLNPERPSAP Sbjct: 382 EIIKHARSIGIWVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAPDIDID 441 Query: 429 XXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKAL 488 GEM+RYAA+RWG +++AQVITFGT+KTK A+KDSARV FGQPG+ IADRITK L Sbjct: 442 FDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARVQFGQPGYQIADRITKVL 501 Query: 489 PPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHAC 548 PPPIMAKDIPLSGITDP HERY EA EVR LI+TDPDVR IY+TARGLEG+VR AGVHAC Sbjct: 502 PPPIMAKDIPLSGITDPEHERYNEAGEVRALIETDPDVRKIYDTARGLEGVVRQAGVHAC 561 Query: 549 AVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIK 608 AVIMSS+PL++ IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAI NIK Sbjct: 562 AVIMSSQPLLECIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIK 621 Query: 609 ANR-GIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLA 667 ANR G Y+LLSRG+TLG+FQLDGG M++LL+RMQPTGFNDIVA LA Sbjct: 622 ANRDGKVVDLENLSIEDEETYKLLSRGETLGIFQLDGGGMQELLKRMQPTGFNDIVAALA 681 Query: 668 LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKV 727 LYRPGPMG+NAH DYADRKNGR+PI PIHPELEEPL +IL ETYGLIVYQEQIM I+QKV Sbjct: 682 LYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLAEILGETYGLIVYQEQIMKISQKV 741 Query: 728 ASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFN 787 A+YT G+AD RKAMGKKK EVL E+ F+ GM ANGFS A+K LWDTILPFAGYAFN Sbjct: 742 ANYTAGQADGFRKAMGKKKPEVLAKEFAAFEAGMKANGFSADAIKTLWDTILPFAGYAFN 801 Query: 788 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 847 KSHAAGYGLVS+WTAYLKA+Y EYMA LLTSVGD+KDK A+YLADCR LGI VL PD+N Sbjct: 802 KSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKTAIYLADCRHLGIRVLSPDIN 861 Query: 848 ESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKV 907 ES NF VG DIR+GLGAIRNVG+ VV S+I+TR KG F DFSDYL+KID CNK++ Sbjct: 862 ESALNFMPVGTDIRYGLGAIRNVGSEVVDSIIETRQSKGMFRDFSDYLDKIDTLPCNKRI 921 Query: 908 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDL---FGGGEDTGTDAV 964 TESLIKAGAFDSLGH RKGL LV+ DAVDSV+ TKKA GQFDL FG + Sbjct: 922 TESLIKAGAFDSLGHTRKGLMLVYEDAVDSVIATKKAADKGQFDLFASFGAEAEDEVGGF 981 Query: 965 FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQ 1024 F I VPD++W+ KH+LALEREMLGLYVSGHPL+G LA Q+DT + I+ G++ + A+ Sbjct: 982 FQIAVPDDKWDRKHELALEREMLGLYVSGHPLDGYEDALAAQIDTPLTTIIAGELRHGAE 1041 Query: 1025 VLVGGILASVNRRVN-KNGLPWASAQLEDLTG-GIEVLFFPQTYSLFGXXXXXXXXXXXX 1082 V VGGI++ V+RR + K+G PWA +ED G +E+L F + YS+ G Sbjct: 1042 VTVGGIISGVDRRFSKKDGSPWAIVTMEDHNGASVELLVFNKVYSIVGSLIVEDNIILAK 1101 Query: 1083 XXXXXXXXRIALIAHELIVPDFSSAQ-ADRPLSVSLPTRQCTIDKVTALKQVLANHPGTS 1141 R++L +L VP+ + PL +++ T QCT+ ++ LKQVL + G S Sbjct: 1102 AHVSIRDDRMSLFCDDLRVPELGPGNGSGLPLRLTMRTDQCTMTNISKLKQVLVGNRGES 1161 Query: 1142 QVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 V+L L+ G+ T + L LRVT S++LMGDLKA +GPG LG Sbjct: 1162 DVYLNLVDGDSSTVMILGDHLRVTRSASLMGDLKATMGPGILG 1204 >tr|C8NPY6|C8NPY6_COREF Tax_Id=196164 (dnaE)SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium efficiens YS-314] Length = 1188 Score = 1561 bits (4042), Expect = 0.0 Identities = 783/1183 (66%), Positives = 911/1183 (77%), Gaps = 9/1183 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTEYSMLDG AKI + E R +MPA+G+TDHGNM+G++ FY T+AG+KP Sbjct: 6 SFVHLHNHTEYSMLDGMAKIDMLADEVNRQQMPAVGITDHGNMYGSNAFYRKMTEAGVKP 65 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAY+AP SRF+ +RV WG+P QK DDVS SGAY H TM+AENATGLRNLF LSS+A Sbjct: 66 IIGIEAYLAPESRFNKERVRWGEPHQKSDDVSASGAYLHQTMLAENATGLRNLFYLSSMA 125 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S+EGQLGKW RMD TTGCPSG+VQTRLRLG EALEAAA W++I+G Sbjct: 126 SYEGQLGKWPRMDAEIIAERAEGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQDIYGR 185 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +N+FLELMDHGLDIE RVR LLEIGRKL +PPL TNDCHYV A+ HEA+LCVQTGK Sbjct: 186 DNYFLELMDHGLDIENRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGK 245 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWE--PRDRM 308 TL D RFKFDG GY++K+AE+MR+LWD VP CD+TL I ERVQ Y ++WE P DRM Sbjct: 246 TLHDEDRFKFDGSGYYIKTAEQMRSLWDDTVPDGCDNTLWIAERVQDYGEIWEEHPHDRM 305 Query: 309 PVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVA 368 PV VPEGH SWL HEV AGLE RF G VP+EY RAEYEI VI KG+PSYFLIVA Sbjct: 306 PVADVPEGHTPTSWLHHEVMAGLEDRFPGQQVPQEYIERAEYEISVIDMKGYPSYFLIVA 365 Query: 369 DLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXX 428 ++I +ARS+GI VGPGRGSAAG+LVAYAL ITNIDPI HGLLFERFLNPERPSAP Sbjct: 366 EIIKHARSIGIWVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAPDIDID 425 Query: 429 XXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKAL 488 GEM+RYAA+RWG +++AQVITFGT+KTK A+KDSARV FGQPG+ IADRITK L Sbjct: 426 FDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARVQFGQPGYQIADRITKVL 485 Query: 489 PPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHAC 548 PPPIMAKDIPLSGITDP HERY EA EVR LI+TDPDVR IY+TARGLEG+VR AGVHAC Sbjct: 486 PPPIMAKDIPLSGITDPEHERYNEAGEVRALIETDPDVRKIYDTARGLEGVVRQAGVHAC 545 Query: 549 AVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIK 608 AVIMSS+PL++ IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAI NIK Sbjct: 546 AVIMSSQPLLECIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIK 605 Query: 609 ANR-GIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLA 667 ANR G Y+LLSRG+TLG+FQLDGG M++LL+RMQPTGFNDIVA LA Sbjct: 606 ANRDGKVVDLENLSIEDEETYKLLSRGETLGIFQLDGGGMQELLKRMQPTGFNDIVAALA 665 Query: 668 LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKV 727 LYRPGPMG+NAH DYADRKNGR+PI PIHPELEEPL +IL ETYGLIVYQEQIM I+QKV Sbjct: 666 LYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLAEILGETYGLIVYQEQIMKISQKV 725 Query: 728 ASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFN 787 A+YT G+AD RKAMGKKK EVL E+ F+ GM ANGFS A+K LWDTILPFAGYAFN Sbjct: 726 ANYTAGQADGFRKAMGKKKPEVLAKEFAAFEAGMKANGFSADAIKTLWDTILPFAGYAFN 785 Query: 788 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 847 KSHAAGYGLVS+WTAYLKA+Y EYMA LLTSVGD+KDK A+YLADCR LGI VL PD+N Sbjct: 786 KSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKTAIYLADCRHLGIRVLSPDIN 845 Query: 848 ESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKV 907 ES NF VG DIR+GLGAIRNVG+ VV S+I+TR KG F DFSDYL+KID CNK++ Sbjct: 846 ESALNFMPVGTDIRYGLGAIRNVGSEVVDSIIETRQSKGMFRDFSDYLDKIDTLPCNKRI 905 Query: 908 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDL---FGGGEDTGTDAV 964 TESLIKAGAFDSLGH RKGL LV+ DAVDSV+ TKKA GQFDL FG + Sbjct: 906 TESLIKAGAFDSLGHTRKGLMLVYEDAVDSVIATKKAADKGQFDLFASFGAEAEDEVGGF 965 Query: 965 FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQ 1024 F I VPD++W+ KH+LALEREMLGLYVSGHPL+G LA Q+DT + I+ G++ + A+ Sbjct: 966 FQIAVPDDKWDRKHELALEREMLGLYVSGHPLDGYEDALAAQIDTPLTTIIAGELRHGAE 1025 Query: 1025 VLVGGILASVNRRVN-KNGLPWASAQLEDLTG-GIEVLFFPQTYSLFGXXXXXXXXXXXX 1082 V VGGI++ V+RR + K+G PWA +ED G +E+L F + YS+ G Sbjct: 1026 VTVGGIISGVDRRFSKKDGSPWAIVTMEDHNGASVELLVFNKVYSIVGSLIVEDNIILAK 1085 Query: 1083 XXXXXXXXRIALIAHELIVPDFSSAQ-ADRPLSVSLPTRQCTIDKVTALKQVLANHPGTS 1141 R++L +L VP+ + PL +++ T QCT+ ++ LKQVL + G S Sbjct: 1086 AHVSIRDDRMSLFCDDLRVPELGPGNGSGLPLRLTMRTDQCTMTNISKLKQVLVGNRGES 1145 Query: 1142 QVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 V+L L+ G+ T + L LRVT S++LMGDLKA +GPG LG Sbjct: 1146 DVYLNLVDGDSSTVMILGDHLRVTRSASLMGDLKATMGPGILG 1188 >tr|C7MYX4|C7MYX4_SACVD Tax_Id=471857 SubName: Full=DNA polymerase III, alpha subunit;[Saccharomonospora viridis] Length = 1193 Score = 1541 bits (3991), Expect = 0.0 Identities = 796/1191 (66%), Positives = 914/1191 (76%), Gaps = 24/1191 (2%) Query: 8 SSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAG 67 S+ SFVHLH HTEYSMLDGAAKI P+ EA RL MPA+GMTDHGNM+GA +FY A KAG Sbjct: 2 SNDSFVHLHVHTEYSMLDGAAKIAPLFEEASRLGMPAVGMTDHGNMYGADDFYQQAKKAG 61 Query: 68 IKPIIGIEAYIAPGSRFDTKRVTWGDPGQK-------GDDVSGSGAYTHMTMVAENATGL 120 IKPIIGIEAY+AP SRF K V WG+ GQ+ G DVSG GAYTHMTM+AENATGL Sbjct: 62 IKPIIGIEAYVAPESRFHKKPVFWGNTGQRSTDEFGEGGDVSGGGAYTHMTMLAENATGL 121 Query: 121 RNLFKLSSLASFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEA 180 RNLF LSSLAS EG K RMD TTGCPSGEVQTRLRLG + EAL+A Sbjct: 122 RNLFTLSSLASMEGYYRK-PRMDRELIAEYAEGIIATTGCPSGEVQTRLRLGQKDEALQA 180 Query: 181 AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNH 240 AA +R+IFG ENFFLELMDHGL IER VREGLLEIG+KLG+ PLATND HYVT++ A +H Sbjct: 181 AADYRDIFGAENFFLELMDHGLAIERSVREGLLEIGKKLGLQPLATNDSHYVTKDQAESH 240 Query: 241 EALLCVQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYAD 300 ALLCVQ+GKTLSDPTRFKFDGDGY+LKSA+EMR WD++VPGA DSTLLI ERVQSY + Sbjct: 241 SALLCVQSGKTLSDPTRFKFDGDGYYLKSAQEMREYWDTEVPGATDSTLLIAERVQSYEE 300 Query: 301 VWEPRDRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGF 360 V+ RDRMP F VPEGH + SWL HEV GL RF G +P+ Y RAE+E++VI KGF Sbjct: 301 VYAHRDRMPKFEVPEGHTEESWLHHEVMRGLRWRFPDG-IPDGYVERAEFELEVIAQKGF 359 Query: 361 PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP 420 PSYFL+VADLINYARSVGIRVGPGRGSAAGSLVAYALGITN+DPIP LLFERFLNPER Sbjct: 360 PSYFLVVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNLDPIPQNLLFERFLNPERA 419 Query: 421 SAPXXXXXXXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAI 480 S P GEM+RYA ++G++RVAQVITFGTIKTKAA+KD+ARV+FGQPG+AI Sbjct: 420 SMPDIDIDFDDRRRGEMVRYATEKYGADRVAQVITFGTIKTKAAIKDAARVHFGQPGYAI 479 Query: 481 ADRITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLV 540 AD+I+KALPPPIMAKDIPLSGI DP HERY EAAEVR LI+ DP+V+TI+ETARGLEGL+ Sbjct: 480 ADKISKALPPPIMAKDIPLSGIVDPEHERYPEAAEVRSLIENDPEVKTIFETARGLEGLI 539 Query: 541 RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTII 600 RNAGVHACAVIMSSEPL+ IPLW+R DGAIITGWDYPSCEAIGLLKMDFLGLRNLT+I Sbjct: 540 RNAGVHACAVIMSSEPLLGTIPLWQR-DDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVI 598 Query: 601 GDAIANIKANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFN 660 GDAI NI+ANRG AY+LL RGDTLGVFQLDGG MRDLLRRMQPTGF Sbjct: 599 GDAIDNIRANRGEEIDLDRLGLDDPEAYKLLGRGDTLGVFQLDGGAMRDLLRRMQPTGFE 658 Query: 661 DIVAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQI 720 DI+AVLALYRPGPMGMNAHNDYADRKNGRQ IKPIHPELEEPLKDILAETYGLIVYQEQI Sbjct: 659 DIIAVLALYRPGPMGMNAHNDYADRKNGRQQIKPIHPELEEPLKDILAETYGLIVYQEQI 718 Query: 721 MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILP 780 M IAQKVA Y+MG+AD LR+AMGKKK EVLE E++GF+ GM NGFS+ A++ALWDTILP Sbjct: 719 MQIAQKVAGYSMGRADVLRRAMGKKKKEVLEKEFEGFRAGMKENGFSDEAIQALWDTILP 778 Query: 781 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT 840 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMA LLTSVGD+KDK+AVYL++CRRLGI Sbjct: 779 FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAALLTSVGDNKDKSAVYLSECRRLGIR 838 Query: 841 VLPPDVNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDI 900 VLPPDVNES FA+VGDDIRFGLGAIRNVGANVV S+I TR +KGK+T F+D+L+ ++ Sbjct: 839 VLPPDVNESGRRFAAVGDDIRFGLGAIRNVGANVVDSIIATREKKGKYTSFTDFLDSSEL 898 Query: 901 TACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDL---FGGGE 957 CNK+V ESLIKAGAFDS GH R + VH DAVD+V+ K+ EAMGQFDL FGGG Sbjct: 899 VVCNKRVIESLIKAGAFDSFGHTRLSMMRVHEDAVDAVVPLKRQEAMGQFDLFQGFGGGG 958 Query: 958 D------TGTDAVFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQI 1011 D T + + +K DEE+ K KLA EREMLGLYVS HPL+G +L I Sbjct: 959 DGDTAVQTASSPLAHLKFDDEEYPRKQKLAYEREMLGLYVSAHPLDGAERILRKHAKRPI 1018 Query: 1012 PAILDGDVANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGX 1071 AIL D + ++ + G++ S+ RRVNK G PWA +ED+ +EVLFFP++Y+LF Sbjct: 1019 AAIL-ADPPKEGEIEIAGLITSLERRVNKKGEPWAICTVEDMDASLEVLFFPKSYALFAA 1077 Query: 1072 XXXXXXXXXXXXXXXXXXXRIALIAHELIVPDFSS---AQADRPLSVSLPTRQCTIDKVT 1128 ++++ A L+ D S + PL++ + T V Sbjct: 1078 DLVEDNAVVVKGRVNWRDDKMSVFAAGLVPLDLSDVALGDEEPPLTLLASAEKITKSVVI 1137 Query: 1129 ALKQVLANHPGTSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLG 1179 LKQ L H G + V L+L+ G+ TL VT SS L+G+LK++ G Sbjct: 1138 ELKQTLQAHRGDTPVRLKLV-GKSSETLYALYDYPVTVSSMLLGELKSIPG 1187 >tr|C8NTP1|C8NTP1_9CORY Tax_Id=585529 (dnaE)SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium genitalium ATCC 33030] Length = 1185 Score = 1540 bits (3986), Expect = 0.0 Identities = 778/1181 (65%), Positives = 902/1181 (76%), Gaps = 8/1181 (0%) Query: 11 SFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATKAGIKP 70 SFVHLHNHTE+SMLDG AK+ + E R MPA+GMTDHGNMFG++ FY T AGIKP Sbjct: 6 SFVHLHNHTEFSMLDGMAKVDLLAEEVSRQGMPAVGMTDHGNMFGSNAFYRRMTDAGIKP 65 Query: 71 IIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 130 IIGIEAY+AP SRF+ KRV WG P QKGDDVS SGAY H TM+AENATGLRNLF+LSSLA Sbjct: 66 IIGIEAYMAPESRFNKKRVLWGTPDQKGDDVSASGAYLHQTMLAENATGLRNLFRLSSLA 125 Query: 131 SFEGQLGKWSRMDXXXXXXXXXXXXXTTGCPSGEVQTRLRLGHEREALEAAAKWREIFGP 190 S+EGQLGKW RMD TTGCPSG+VQTRLRLG +ALEAAA W++I+G Sbjct: 126 SYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQYDQALEAAAMWQDIYGK 185 Query: 191 ENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLCVQTGK 250 +N+FLELMDHGL IERRVRE LL IG L +PPL TNDCHYV A HEA+LCVQTGK Sbjct: 186 DNYFLELMDHGLTIERRVREDLLRIGEALDLPPLVTNDCHYVLESQAPAHEAMLCVQTGK 245 Query: 251 TLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVW--EPRDRM 308 TL DP RFKFDG GY++KSAE+MR WD VP CD+TL + ERV Y ++W P DRM Sbjct: 246 TLLDPDRFKFDGTGYYIKSAEQMRNDWDDMVPDGCDNTLWVAERVGDYGELWAEHPHDRM 305 Query: 309 PVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFLIVA 368 P+ VPEG +WL EV GL+ RF G VPE+Y TRA+YEI VI KG+PSYFLIVA Sbjct: 306 PIATVPEGETPTTWLRKEVHRGLDERFEGKEVPEDYRTRADYEIDVIDMKGYPSYFLIVA 365 Query: 369 DLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPXXXXX 428 +LI +ARS+GIRVGPGRGSAAGSLVAYAL ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 366 ELIKHARSIGIRVGPGRGSAAGSLVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDID 425 Query: 429 XXXXXXGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRITKAL 488 GEML YAA WG +++AQVITFGT+KTK A+KDSA+VNFGQ GF ADRI AL Sbjct: 426 FDDRRRGEMLTYAAENWGEDKIAQVITFGTVKTKQAIKDSAKVNFGQEGFQKADRINAAL 485 Query: 489 PPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHAC 548 PP IMAKDIPLSGITDP H+RY EA EVR +I+TDPDV IYETARGLEG+VR AGVHAC Sbjct: 486 PPAIMAKDIPLSGITDPEHDRYSEATEVRSMIETDPDVAKIYETARGLEGVVRQAGVHAC 545 Query: 549 AVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIANIK 608 AVIM+S PL+D IP+WKRP DGA+ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAI NI+ Sbjct: 546 AVIMASVPLMDHIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIE 605 Query: 609 ANRGIXXXXXXXXXXXXAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLAL 668 NRG A YELLSRGDTLGVFQLDGG M++LL+RM+PTGFNDIVA LAL Sbjct: 606 KNRGETIDLEALDTDNEAVYELLSRGDTLGVFQLDGGGMQELLKRMKPTGFNDIVASLAL 665 Query: 669 YRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQKVA 728 YRPGPMG+NAH DYADRKNGR+PI PIHPELEEPLK+IL ETYGLIVYQEQIM I+QKVA Sbjct: 666 YRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLKEILDETYGLIVYQEQIMNISQKVA 725 Query: 729 SYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYAFNK 788 +YT G+AD RKAMGKKK EVL EY+ F +GM NG+S+ AV ALW TI PFA YAFNK Sbjct: 726 NYTAGQADGFRKAMGKKKPEVLAQEYEKFSQGMFDNGYSKAAVDALWGTIEPFASYAFNK 785 Query: 789 SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNE 848 SHAAGY LVSYWTAYLKANY AEYMA LLTSVGD KDK+A+YLADCR LGI+VLPPD+NE Sbjct: 786 SHAAGYALVSYWTAYLKANYAAEYMAALLTSVGDKKDKSAIYLADCRHLGISVLPPDINE 845 Query: 849 SEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNKKVT 908 SE F +V DIR+GL AIRNVGA VV S++++R KG FT+FSDYL+KID+ CNK++T Sbjct: 846 SEETFMAVDKDIRYGLAAIRNVGAEVVESIMESRRTKGAFTNFSDYLDKIDLLPCNKRIT 905 Query: 909 ESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFG--GGEDTGTDAVFT 966 ESLIKAGAFDSL HPRKGL LV DAVDSVL TKKA GQFDLF GG+ T+A F+ Sbjct: 906 ESLIKAGAFDSLDHPRKGLLLVSDDAVDSVLTTKKAADKGQFDLFSAFGGDQEATNA-FS 964 Query: 967 IKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQVL 1026 I+VPD+EWE KHKLALEREMLGLYVSGHPL+G + Q DT +P IL+G++ + +V Sbjct: 965 IEVPDDEWEKKHKLALEREMLGLYVSGHPLDGFEEAIDAQTDTPLPKILEGEMRHGDEVT 1024 Query: 1027 VGGILASVNRRVN-KNGLPWASAQLEDLTGG-IEVLFFPQTYSLFGXXXXXXXXXXXXXX 1084 +GGI++ V+RR + K+G PWA LED G +EVL F + Y+L Sbjct: 1025 IGGIISGVDRRYSKKDGSPWAIVTLEDHHGAQVEVLLFNKVYALVAPQIVEDNIILVKAH 1084 Query: 1085 XXXXXXRIALIAHELIVPDFSSAQ-ADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQV 1143 R++L ++ VP+ A PL ++L T QCT+D + LKQVL+N+PG S V Sbjct: 1085 VSIRDDRMSLFGDDVKVPELGPGNGAGLPLRLTLKTEQCTMDNIRKLKQVLSNNPGDSDV 1144 Query: 1144 HLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 +L L++G++ + L LRV S +LMGDLKA +G G LG Sbjct: 1145 YLNLVNGDQSQLMILGDHLRVERSGSLMGDLKAAMGAGVLG 1185 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.319 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 9,623,123,050 Number of extensions: 411321874 Number of successful extensions: 923012 Number of sequences better than 10.0: 3699 Number of HSP's gapped: 900283 Number of HSP's successfully gapped: 5386 Length of query: 1184 Length of database: 4,236,830,644 Length adjustment: 150 Effective length of query: 1034 Effective length of database: 2,360,651,044 Effective search space: 2440913179496 Effective search space used: 2440913179496 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 87 (38.1 bits)