BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3319 (193 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QXJ0|A0QXJ0_MYCS2 Tax_Id=246196 SubName: Full=Repressor pro... 344 3e-93 tr|A1THL6|A1THL6_MYCVP Tax_Id=350058 SubName: Full=Transcription... 275 3e-72 tr|Q79EU9|Q79EU9_9ACTO Tax_Id=1744 (hemR)SubName: Full=HemR prot... 164 4e-39 tr|P72185|P72185_9ACTO Tax_Id=1744 SubName: Full=Repressor prote... 164 4e-39 tr|D3D1X6|D3D1X6_9ACTO Tax_Id=102897 SubName: Full=Transcription... 163 9e-39 tr|A4FCT1|A4FCT1_SACEN Tax_Id=405948 SubName: Full=TetR-family t... 154 7e-36 tr|D1VLP3|D1VLP3_9ACTO Tax_Id=298654 SubName: Full=Transcription... 152 2e-35 tr|B8EQU1|B8EQU1_METSB Tax_Id=395965 SubName: Full=Transcription... 151 3e-35 tr|C7PYN5|C7PYN5_CATAD Tax_Id=479433 SubName: Full=Transcription... 150 6e-35 tr|C7MHS0|C7MHS0_BRAFD Tax_Id=446465 SubName: Full=Transcription... 145 3e-33 tr|D6KD63|D6KD63_9ACTO Tax_Id=645465 SubName: Full=Repressor pro... 142 2e-32 tr|Q9RJX7|Q9RJX7_STRCO Tax_Id=1902 SubName: Full=Putative tetR-f... 142 2e-32 tr|D6ESG3|D6ESG3_STRLI Tax_Id=457428 SubName: Full=TetR family t... 142 2e-32 tr|B5GMB8|B5GMB8_STRCL Tax_Id=443255 SubName: Full=TetR-family t... 139 2e-31 tr|D5SKI4|D5SKI4_STRCL Tax_Id=443255 SubName: Full=TetR family t... 137 5e-31 tr|C6J3M2|C6J3M2_9BACL Tax_Id=621372 SubName: Full=Transcription... 132 3e-29 tr|B5ZJH1|B5ZJH1_GLUDA Tax_Id=272568 SubName: Full=Regulatory pr... 129 2e-28 tr|D6M6G1|D6M6G1_9ACTO Tax_Id=465543 SubName: Full=Repressor pro... 125 3e-27 tr|D3D3I7|D3D3I7_9ACTO Tax_Id=102897 SubName: Full=Transcription... 120 1e-25 tr|D3Q783|D3Q783_STANL Tax_Id=446470 SubName: Full=Transcription... 118 3e-25 tr|C9NJ24|C9NJ24_9ACTO Tax_Id=591167 SubName: Full=Transcription... 118 4e-25 tr|B0T5I8|B0T5I8_CAUSK Tax_Id=366602 SubName: Full=Transcription... 117 7e-25 tr|C6D7M1|C6D7M1_PAESJ Tax_Id=324057 SubName: Full=Transcription... 115 4e-24 tr|B8GGH6|B8GGH6_METPE Tax_Id=521011 SubName: Full=Transcription... 113 1e-23 tr|A1AYD7|A1AYD7_PARDP Tax_Id=318586 SubName: Full=Transcription... 111 5e-23 tr|D1XIG5|D1XIG5_9ACTO Tax_Id=647653 SubName: Full=Transcription... 110 1e-22 tr|D1VF78|D1VF78_9ACTO Tax_Id=298654 SubName: Full=Transcription... 109 2e-22 tr|B9E1V2|B9E1V2_CLOK1 Tax_Id=583346 SubName: Full=Putative unch... 107 7e-22 tr|A5N8E6|A5N8E6_CLOK5 Tax_Id=431943 SubName: Full=Transcription... 107 7e-22 tr|C6WD21|C6WD21_ACTMD Tax_Id=446462 SubName: Full=Transcription... 106 1e-21 tr|A9H5N5|A9H5N5_GLUDA Tax_Id=272568 (tetR)SubName: Full=Putativ... 103 8e-21 tr|A9FBT9|A9FBT9_SORC5 Tax_Id=448385 SubName: Full=Transcription... 102 3e-20 tr|A4FR08|A4FR08_SACEN Tax_Id=405948 SubName: Full=Transcription... 102 3e-20 tr|D3CAZ8|D3CAZ8_9ACTO Tax_Id=648999 SubName: Full=Transcription... 100 2e-19 tr|D1XP77|D1XP77_9ACTO Tax_Id=647653 SubName: Full=Transcription... 100 2e-19 tr|D1S797|D1S797_9ACTO Tax_Id=644283 SubName: Full=Transcription... 100 2e-19 tr|Q5YRF1|Q5YRF1_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 99 3e-19 tr|C6WI37|C6WI37_ACTMD Tax_Id=446462 SubName: Full=Regulatory pr... 96 3e-18 tr|Q2JF52|Q2JF52_FRASC Tax_Id=106370 SubName: Full=Transcription... 90 2e-16 tr|Q0RRD9|Q0RRD9_FRAAA Tax_Id=326424 SubName: Full=Putative TetR... 89 2e-16 tr|A4TC40|A4TC40_MYCGI Tax_Id=350054 SubName: Full=Transcription... 89 3e-16 tr|D0L4B0|D0L4B0_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 88 5e-16 tr|A8L9W4|A8L9W4_FRASN Tax_Id=298653 SubName: Full=Transcription... 86 2e-15 tr|A0NJ12|A0NJ12_OENOE Tax_Id=379360 SubName: Full=Transcription... 86 2e-15 tr|D1BFR0|D1BFR0_SANKS Tax_Id=446469 SubName: Full=Transcription... 85 4e-15 >tr|A0QXJ0|A0QXJ0_MYCS2 Tax_Id=246196 SubName: Full=Repressor protein;[Mycobacterium smegmatis] Length = 193 Score = 344 bits (883), Expect = 3e-93 Identities = 178/193 (92%), Positives = 178/193 (92%) Query: 1 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI 60 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI Sbjct: 1 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI 60 Query: 61 RHRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDL 120 RHRGEIDRIPVPDTGTLRDDVVAVLTEFND YFDEPDGSPKQLRDL Sbjct: 61 RHRGEIDRIPVPDTGTLRDDVVAVLTEFNDRRSRIIGIIAARLGAYFDEPDGSPKQLRDL 120 Query: 121 FLSDGPTAMETIVERAVQRGELAAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 FLSDGPTAMETIVERAVQRGELAAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDD Sbjct: 121 FLSDGPTAMETIVERAVQRGELAAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 Query: 181 IFLPLATRSGQER 193 IFLPLATRSGQER Sbjct: 181 IFLPLATRSGQER 193 >tr|A1THL6|A1THL6_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 213 Score = 275 bits (702), Expect = 3e-72 Identities = 140/190 (73%), Positives = 156/190 (82%) Query: 1 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI 60 +QRRRG+ALESAILDAGW+QLIEAGY+ FTI+AVA+RSGSARSVLYRRWPSRLDLLKAVI Sbjct: 8 VQRRRGAALESAILDAGWEQLIEAGYERFTIDAVASRSGSARSVLYRRWPSRLDLLKAVI 67 Query: 61 RHRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDL 120 RHRGE+D IP PDTGTLR DV+A+LT FND YFDE GSP +LR L Sbjct: 68 RHRGEVDMIPTPDTGTLRGDVLAILTAFNDRRSRTIGLLAARLGAYFDEAGGSPHELRSL 127 Query: 121 FLSDGPTAMETIVERAVQRGELAAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 F+ GP++ME IVERAV RGELAA+PPAR+VSLPADL+RHELLMTMTAV TI EIVDD Sbjct: 128 FVPQGPSSMEKIVERAVLRGELAAMPPARVVSLPADLLRHELLMTMTAVSPQTILEIVDD 187 Query: 181 IFLPLATRSG 190 IFLPLAT G Sbjct: 188 IFLPLATHFG 197 >tr|Q79EU9|Q79EU9_9ACTO Tax_Id=1744 (hemR)SubName: Full=HemR protein;[Propionibacterium freudenreichii] Length = 243 Score = 164 bits (416), Expect = 4e-39 Identities = 90/185 (48%), Positives = 116/185 (62%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG ALE AILDAGW +L AGY G T EAVA R+ + ++ LYRRWP++ L+ AV+ Sbjct: 19 RRRGPALEKAILDAGWRELAGAGYAGLTFEAVAERAHTGKAALYRRWPNKESLVLAVLSQ 78 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 R D VPDTG+LR DV+AVL N YFDE + +P++LR L Sbjct: 79 RYFNDPATVPDTGSLRGDVLAVLRGANRLGDDAPALISVLLGAYFDETNTTPQELRAHLL 138 Query: 123 SDGPTAMETIVERAVQRGELAAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDIF 182 D M +VERA+ RGE+AA P R+++LP DLVR + MT +VP + I +IVD +F Sbjct: 139 GDRVDTMALLVERAIARGEVAAPLPRRVLALPMDLVRLQFFMTFQSVPDEDIVDIVDTVF 198 Query: 183 LPLAT 187 LPLAT Sbjct: 199 LPLAT 203 >tr|P72185|P72185_9ACTO Tax_Id=1744 SubName: Full=Repressor protein;[Propionibacterium freudenreichii] Length = 259 Score = 164 bits (416), Expect = 4e-39 Identities = 90/185 (48%), Positives = 116/185 (62%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG ALE AILDAGW +L AGY G T EAVA R+ + ++ LYRRWP++ L+ AV+ Sbjct: 35 RRRGPALEKAILDAGWRELAGAGYAGLTFEAVAERAHTGKAALYRRWPNKESLVLAVLSQ 94 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 R D VPDTG+LR DV+AVL N YFDE + +P++LR L Sbjct: 95 RYFNDPATVPDTGSLRGDVLAVLRGANRLGDDAPALISVLLGAYFDETNTTPQELRAHLL 154 Query: 123 SDGPTAMETIVERAVQRGELAAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDIF 182 D M +VERA+ RGE+AA P R+++LP DLVR + MT +VP + I +IVD +F Sbjct: 155 GDRVDTMALLVERAIARGEVAAPLPRRVLALPMDLVRLQFFMTFQSVPDEDIVDIVDTVF 214 Query: 183 LPLAT 187 LPLAT Sbjct: 215 LPLAT 219 >tr|D3D1X6|D3D1X6_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp. EUN1f] Length = 193 Score = 163 bits (413), Expect = 9e-39 Identities = 86/189 (45%), Positives = 116/189 (61%), Gaps = 1/189 (0%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG+ALE+A+LDA W +L E GY FT++AV R+G++R VLYRRW R +L++A I Sbjct: 3 ERRRGAALEAALLDAAWAELTEHGYANFTMDAVVQRAGTSRPVLYRRWSDRHELVRATII 62 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 E D I VPDTG+LR DV+ ++ + N Y+ E SP LR + Sbjct: 63 RALERDEITVPDTGSLRGDVLTLMRQVNATRIQLVTLVSVHLAGYYQETGTSPADLRRVL 122 Query: 122 LSDGPTAMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 D ++ + RA QRGE+ P P R+ SLP DL+ HE+LMT+ VP D + EIVD Sbjct: 123 RGDRKDGLDALYARAAQRGEIGPTPLPDRVRSLPFDLLHHEVLMTLAPVPEDVLTEIVDT 182 Query: 181 IFLPLATRS 189 IFLPLA R+ Sbjct: 183 IFLPLARRA 191 >tr|A4FCT1|A4FCT1_SACEN Tax_Id=405948 SubName: Full=TetR-family transcriptional regulator;[Saccharopolyspora erythraea] Length = 206 Score = 154 bits (388), Expect = 7e-36 Identities = 89/186 (47%), Positives = 118/186 (63%), Gaps = 6/186 (3%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI-R 61 RRRG+ LE+AI+DA W+ L+E GY+GFT EAVA +G+++ VLYRRWP R DLL A + R Sbjct: 12 RRRGAVLENAIIDAAWEVLVERGYNGFTFEAVAAHAGTSKPVLYRRWPQRADLLIATLTR 71 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRD-L 120 H ++ +PDTG+LR D +A+L N YF E + LR L Sbjct: 72 HWYPLE---IPDTGSLRQDALALLRAVNAERARTVMLMRIQLADYFRETGTNFSDLRSRL 128 Query: 121 FLSDGPTAMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 L+D +V+ AV+RGELA VP P R+V+LP DL+RH+LLM AVP +TI EIVD Sbjct: 129 RLADEKPPFAQLVDSAVERGELAEVPRPERVVNLPFDLLRHDLLMGTGAVPDETIVEIVD 188 Query: 180 DIFLPL 185 ++LPL Sbjct: 189 AVWLPL 194 >tr|D1VLP3|D1VLP3_9ACTO Tax_Id=298654 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp. EuI1c] Length = 194 Score = 152 bits (385), Expect = 2e-35 Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 1/185 (0%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG+ L+ A+LDA W +L+E GY FT++AV R+G++R VLYRRWP R +L++A + Sbjct: 3 ERRRGAVLDEALLDAAWAELMENGYASFTMDAVVQRAGTSRPVLYRRWPDRHELVRAAVT 62 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H + DR+ +PDTGTLR DV+ ++ E N Y+ E SP LR Sbjct: 63 HALDRDRVDIPDTGTLRGDVLTLMREINATRVQLATILSVHLAGYYQETGTSPADLRQFA 122 Query: 122 LSDGPTAMETIVERAVQRGELAAVPPA-RIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 ++++ + +RA RGE+ + R+ +LP DL+RHE LMT+ VP + EIVD Sbjct: 123 HDGRRSSVDVLFDRAAARGEIGPEGLSDRLRALPFDLLRHEFLMTLAPVPDQVLVEIVDT 182 Query: 181 IFLPL 185 IFLPL Sbjct: 183 IFLPL 187 >tr|B8EQU1|B8EQU1_METSB Tax_Id=395965 SubName: Full=Transcriptional regulator, TetR family;[Methylocella silvestris] Length = 204 Score = 151 bits (382), Expect = 3e-35 Identities = 83/186 (44%), Positives = 108/186 (58%), Gaps = 1/186 (0%) Query: 1 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI 60 + RRRG ALE A+L W+QL E GY FT++AVA RS ++R V+YRRW SR +L A I Sbjct: 10 LSRRRGMALEKALLQVAWEQLTEGGYSNFTMDAVADRSHTSRPVIYRRWSSRAELAIAAI 69 Query: 61 RHRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDL 120 H + PD G LRD++++VL + + + E +P LR Sbjct: 70 GHHVAEHPVVAPDLGRLRDEMISVLQQSMERGALIAGIIARDMSDLYRETKATPSSLRQS 129 Query: 121 FLSDGPTAMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 L +E I+ERAV RGEL+ R++SLPADL+RHE MT+ VPA TI EIVD Sbjct: 130 ILGAEGKLLEKIIERAVARGELSGQGLTPRLISLPADLLRHEAFMTLAPVPASTIAEIVD 189 Query: 180 DIFLPL 185 DI LPL Sbjct: 190 DIVLPL 195 >tr|C7PYN5|C7PYN5_CATAD Tax_Id=479433 SubName: Full=Transcriptional regulator, TetR family; Flags: Precursor;[Catenulispora acidiphila] Length = 206 Score = 150 bits (380), Expect = 6e-35 Identities = 79/188 (42%), Positives = 116/188 (61%), Gaps = 3/188 (1%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 QRR G LE+A+L+A W +L+E G+ T+E++ATR+ + +VLYRRWP++ D++ A IR Sbjct: 10 QRRHGEELEAALLEAAWQELVETGFTKLTMESIATRAKTGVAVLYRRWPNKDDMILAAIR 69 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H G + VPDTG LRDD+VA LT + D +P +LR+ Sbjct: 70 HYGTTHPVAVPDTGNLRDDMVAFLTGVSVSRVSFAAIISATFAGLRDSTGMTPAELRERV 129 Query: 122 LSDGPTAMETIVERAVQRGE--LAAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 +S+ E ++ RA RGE L A+PPA ++S+P DL+RHE+LMT + + + EIVD Sbjct: 130 MSNASRWSEQLLARAQDRGEIDLDAIPPA-VLSMPFDLIRHEMLMTYKPIAPERVIEIVD 188 Query: 180 DIFLPLAT 187 D+F+PL T Sbjct: 189 DLFMPLVT 196 >tr|C7MHS0|C7MHS0_BRAFD Tax_Id=446465 SubName: Full=Transcriptional regulator;[Brachybacterium faecium] Length = 195 Score = 145 bits (365), Expect = 3e-33 Identities = 81/186 (43%), Positives = 110/186 (59%), Gaps = 1/186 (0%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG+ LE AIL+AGWDQL+ GY GFT EA+A R+ + ++VLYRRW + LL AVI Sbjct: 5 RRRGAELEKAILEAGWDQLLSDGYSGFTFEAIAERAQTGKAVLYRRWSGKEALLLAVITQ 64 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 D +PDTG+LRDDV+ +L N +FD+ + +LR L Sbjct: 65 HHLDDSQDLPDTGSLRDDVLELLRSRNAIGDHIAALLSAILGAHFDDTHVTIAELRRQLL 124 Query: 123 SDGPTAMETIVERAVQRGEL-AAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDI 181 + + TIV+RAV RGE+ P R+ SLP +L R EL+M VP +T+ +IVD Sbjct: 125 EEHGPTLRTIVQRAVARGEIPGPAVPERVASLPFELFRAELIMRFDRVPDETLVDIVDTA 184 Query: 182 FLPLAT 187 F+PLA+ Sbjct: 185 FIPLAS 190 >tr|D6KD63|D6KD63_9ACTO Tax_Id=645465 SubName: Full=Repressor protein;[Streptomyces sp. e14] Length = 186 Score = 142 bits (359), Expect = 2e-32 Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 4/185 (2%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG+ALE A+LDA W++L GY FT++AV R+G++ VLYRRW R +L +A I Sbjct: 3 ERRRGAALEKALLDAAWEELTAGGYARFTMDAVGRRAGTSPPVLYRRWSDRDELARAAIA 62 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H R+ PDTG+LR+DV+ ++ E N Y+ E SP DL Sbjct: 63 HALREQRVATPDTGSLREDVLTLMREINATRVQFITVMNVHLAGYYQETGNSP---ADLL 119 Query: 122 LSDGPTAMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 + + + + +RAV+RGE+ A RI SLP DL+RHE+L T VP + EIVD Sbjct: 120 TTGHEESGDVLFDRAVERGEIKAERLTERIKSLPFDLLRHEILTTYAPVPDHVLEEIVDT 179 Query: 181 IFLPL 185 +FLPL Sbjct: 180 VFLPL 184 >tr|Q9RJX7|Q9RJX7_STRCO Tax_Id=1902 SubName: Full=Putative tetR-family transcriptional regulator;[Streptomyces coelicolor] Length = 189 Score = 142 bits (358), Expect = 2e-32 Identities = 81/189 (42%), Positives = 107/189 (56%), Gaps = 5/189 (2%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 QRRRG+ALE A+LDA W +L E GY FT++ V R+G++ VLYRRW R +L +A + Sbjct: 3 QRRRGAALEKALLDAAWGELAERGYARFTMDGVVRRAGTSPPVLYRRWAHRDELARAAVA 62 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H E R+ PDTGTLR D++A++ E Y E SP +L D Sbjct: 63 HVLEEARVDTPDTGTLRGDLLALMREIGTANAQLVILMYAHLAGYCQETGTSPGELLDAA 122 Query: 122 LSDGPTAMETIVERAVQRGELAAVP---PARIVSLPADLVRHELLMTMTAVPADTIREIV 178 A+ + +RAV RGE A P R+ SLP DL+R E+L T+ VP D + EIV Sbjct: 123 RGKSADALAEVYDRAVARGE--ARPERLTGRVRSLPFDLLRQEILATLAPVPEDVVEEIV 180 Query: 179 DDIFLPLAT 187 D IFLPL + Sbjct: 181 DTIFLPLVS 189 >tr|D6ESG3|D6ESG3_STRLI Tax_Id=457428 SubName: Full=TetR family transcriptional regulator;[Streptomyces lividans TK24] Length = 189 Score = 142 bits (358), Expect = 2e-32 Identities = 81/189 (42%), Positives = 107/189 (56%), Gaps = 5/189 (2%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 QRRRG+ALE A+LDA W +L E GY FT++ V R+G++ VLYRRW R +L +A + Sbjct: 3 QRRRGAALEKALLDAAWGELAERGYARFTMDGVVRRAGTSPPVLYRRWAHRDELARAAVA 62 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H E R+ PDTGTLR D++A++ E Y E SP +L D Sbjct: 63 HVLEEARVDTPDTGTLRGDLLALMREIGTANAQLVILMYAHLAGYCQETGTSPGELLDAA 122 Query: 122 LSDGPTAMETIVERAVQRGELAAVP---PARIVSLPADLVRHELLMTMTAVPADTIREIV 178 A+ + +RAV RGE A P R+ SLP DL+R E+L T+ VP D + EIV Sbjct: 123 RGKSADALAEVYDRAVARGE--ARPERLTGRVRSLPFDLLRQEILATLAPVPEDVVEEIV 180 Query: 179 DDIFLPLAT 187 D IFLPL + Sbjct: 181 DTIFLPLVS 189 >tr|B5GMB8|B5GMB8_STRCL Tax_Id=443255 SubName: Full=TetR-family transcriptional regulator;[Streptomyces clavuligerus ATCC 27064] Length = 197 Score = 139 bits (349), Expect = 2e-31 Identities = 80/196 (40%), Positives = 120/196 (61%), Gaps = 5/196 (2%) Query: 1 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI 60 M RRRG ALE+AILDA WD+L E GY T ++VA R+G+++ VLYRRW + L++A + Sbjct: 1 MGRRRGEALEAAILDAAWDELNERGYTNLTTDSVARRAGTSKPVLYRRWADKRKLVEAAV 60 Query: 61 RHRGEIDRIPVP-DTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRD 119 R + ++ VP DTG+LR D++A LT ++ YF E + S +LR+ Sbjct: 61 VRR-NVTQLTVPADTGSLRGDLIATLTGASERQGPVLAQLSLLLAGYFAETETSFTELRE 119 Query: 120 LFLSDGPTAMETIVERAVQRGEL--AAVPPARIVSLPADLVRHELLMTMTAVPADTIREI 177 + ++ + + I+ERA+ RGE+ + + P RI +LP DL+R E +MT+ V + I EI Sbjct: 120 MIIAGRRSGRDEIMERAIARGEIDPSRLTP-RIAALPFDLLRGETMMTLRPVAPEVIEEI 178 Query: 178 VDDIFLPLATRSGQER 193 VD IFLPL + +R Sbjct: 179 VDTIFLPLVRPADGDR 194 >tr|D5SKI4|D5SKI4_STRCL Tax_Id=443255 SubName: Full=TetR family transcriptional regulator;[Streptomyces clavuligerus ATCC 27064] Length = 210 Score = 137 bits (346), Expect = 5e-31 Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 5/194 (2%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG ALE+AILDA WD+L E GY T ++VA R+G+++ VLYRRW + L++A + Sbjct: 16 RRRGEALEAAILDAAWDELNERGYTNLTTDSVARRAGTSKPVLYRRWADKRKLVEAAVVR 75 Query: 63 RGEIDRIPVP-DTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 R + ++ VP DTG+LR D++A LT ++ YF E + S +LR++ Sbjct: 76 R-NVTQLTVPADTGSLRGDLIATLTGASERQGPVLAQLSLLLAGYFAETETSFTELREMI 134 Query: 122 LSDGPTAMETIVERAVQRGEL--AAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 ++ + + I+ERA+ RGE+ + + P RI +LP DL+R E +MT+ V + I EIVD Sbjct: 135 IAGRRSGRDEIMERAIARGEIDPSRLTP-RIAALPFDLLRGETMMTLRPVAPEVIEEIVD 193 Query: 180 DIFLPLATRSGQER 193 IFLPL + +R Sbjct: 194 TIFLPLVRPADGDR 207 >tr|C6J3M2|C6J3M2_9BACL Tax_Id=621372 SubName: Full=Transcriptional regulator;[Paenibacillus sp. oral taxon 786 str. D14] Length = 190 Score = 132 bits (331), Expect = 3e-29 Identities = 80/186 (43%), Positives = 108/186 (58%), Gaps = 12/186 (6%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDL-LKAVIR 61 RRRG+ LE AIL A WD+L+E G+ TIE VA R+ +++ V+YRRWP+R +L L A++ Sbjct: 12 RRRGAELEGAILQAAWDELMEIGFHHLTIEGVAARAQTSKPVIYRRWPNREELVLAAILN 71 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H + + VPDTG LR DV+ +L E N+ + S D+ Sbjct: 72 H---LPTVSVPDTGNLRSDVLLLLNELNEMLQQIGPKTIHGLMSVVSDIPFS-----DIL 123 Query: 122 LSDGPTAMETIVERAVQRGEL--AAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 M I++RA++RGE+ V P RI LP DLVRHELL+T+ V TI EIVD Sbjct: 124 NFRRTNTMTVILDRAIERGEIRPEKVTP-RITRLPVDLVRHELLITLEPVSMKTIEEIVD 182 Query: 180 DIFLPL 185 +IFLPL Sbjct: 183 EIFLPL 188 >tr|B5ZJH1|B5ZJH1_GLUDA Tax_Id=272568 SubName: Full=Regulatory protein TetR;[Gluconacetobacter diazotrophicus] Length = 193 Score = 129 bits (323), Expect = 2e-28 Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 5/188 (2%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG+ALE AIL+A W +++E GY+G T+E VA R+ ++R VL+RRWPSR L A + Sbjct: 8 RRRGAALEEAILEAAWAEVMERGYEGLTMENVARRAETSRPVLHRRWPSRTALATAALAQ 67 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 + I +PD G+LRD++ +L +D S +R + Sbjct: 68 QFARANIVIPDMGSLRDELRLLLRCMSDRAGSRDLQLFFDMQKDLVAERSSFADIRARIV 127 Query: 123 SDGPTAMETIVERAVQRGEL--AAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 DG + ++ RA++RGE+ A + P RI SLP DL RHE++MT + D IREIVDD Sbjct: 128 -DG-SQFHAVIGRAIERGEIDPARLTP-RIASLPLDLARHEMMMTFQPLSEDAIREIVDD 184 Query: 181 IFLPLATR 188 IFLPL R Sbjct: 185 IFLPLVRR 192 >tr|D6M6G1|D6M6G1_9ACTO Tax_Id=465543 SubName: Full=Repressor protein;[Streptomyces sp. SPB74] Length = 193 Score = 125 bits (313), Expect = 3e-27 Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 4/181 (2%) Query: 9 LESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRHRGEIDR 68 +E A+LDA W++L GY GFT++AV R+G++ VLYRRWP R L++A + H E Sbjct: 1 MERALLDAAWEELTARGYAGFTMDAVVRRAGTSPPVLYRRWPDRDSLVRAAVTHVLERAH 60 Query: 69 IPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFLSDGPTA 128 + VPDTG LR D++ ++ N+ Y+ E +P DL Sbjct: 61 LDVPDTGGLRGDLLTLMRTINETRVRLITVMNAHLAGYYQETGTNP---GDLLAEAREAN 117 Query: 129 METIVERAVQRGELA-AVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDIFLPLAT 187 + I ERA+ RGE+A RI LP DL+RHE+L++ VP D + EIVD I LPL Sbjct: 118 GDVIWERALARGEIAPGRLTERIKRLPFDLLRHEILVSFAPVPDDVLEEIVDTIVLPLLG 177 Query: 188 R 188 R Sbjct: 178 R 178 >tr|D3D3I7|D3D3I7_9ACTO Tax_Id=102897 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp. EUN1f] Length = 197 Score = 120 bits (300), Expect = 1e-25 Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 7/185 (3%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG ALE AIL+A +L E GY G T E VA R+ +++ VLYRRWP++ +++ A Sbjct: 6 RRRGEALEQAILEAVTAELAEHGYAGLTFEGVAVRAETSKPVLYRRWPTKAEMV-AAATV 64 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 R I PDTG+L D++A+L + + P + + LR+L + Sbjct: 65 RANSTTIVSPDTGSLAGDLLALLDQVRTVVDASDRSVLLTLMA--ELPPSAAESLRELLV 122 Query: 123 SDGPTAMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPAD-TIREIVDD 180 + G ++ IV+ A QRGEL P P+R+++LP DLVRHE+L+T T P+D +R IVD Sbjct: 123 ARGTQLVQPIVDHARQRGELGDAPLPSRLLALPIDLVRHEILVTGT--PSDAALRSIVDV 180 Query: 181 IFLPL 185 I +PL Sbjct: 181 ILMPL 185 >tr|D3Q783|D3Q783_STANL Tax_Id=446470 SubName: Full=Transcriptional regulator, TetR family;[Stackebrandtia nassauensis] Length = 206 Score = 118 bits (296), Expect = 3e-25 Identities = 76/192 (39%), Positives = 111/192 (57%), Gaps = 4/192 (2%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG LE+AIL A W++L+E GY GF IE VA R+ + ++VLYRRW SR +L+ AV+ Sbjct: 13 KRRRGKELEAAILAAAWEELLEVGYSGFHIENVAARAQTGKAVLYRRWSSRAELVLAVVS 72 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 R D+ VP+TG LR DV+A++T ++LR L Sbjct: 73 SRAP-DKDEVPNTGDLRTDVIALMTWMAGRLLPVGRDVTLGLVSEVYRNPELSERLRALI 131 Query: 122 LSDGP-TAMETIVERAVQRGELAAVPPA-RIVSLPADLVRHELLMTMTAVPADTIREIVD 179 + M I++RAV+RG++ R+V+LP DL+R+++L+ TA D+I EIVD Sbjct: 132 VETFQHRTMGPIIDRAVERGQVDRDRVTLRVVTLPIDLMRNDMLLYGTA-SEDSITEIVD 190 Query: 180 DIFLPLATRSGQ 191 IFLP+ G+ Sbjct: 191 QIFLPVIGYRGR 202 >tr|C9NJ24|C9NJ24_9ACTO Tax_Id=591167 SubName: Full=Transcriptional regulator, TetR family;[Streptomyces flavogriseus ATCC 33331] Length = 225 Score = 118 bits (295), Expect = 4e-25 Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG LE+A+LDA WD+L+ GY+ T EAVA+R+G++R+VLYRRWP++ +L A ++ Sbjct: 26 KRRRGGELEAALLDAAWDELVTRGYEELTYEAVASRAGTSRAVLYRRWPTKRELALAALQ 85 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 + PDTG LR DV+A+L + + D S L Sbjct: 86 RKAPPVPDDPPDTGELRGDVLALLGFVVRQMAGLAPVRQVLAAEHGRDTDLS-AYLASRN 144 Query: 122 LSDGPTAMETIVERAVQRGEL--AAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 G M T++ERA RGE+ + P R+V LP LV H+LLM + E+VD Sbjct: 145 RGPGGDWMRTVLERAADRGEIDPSVRLPDRLVGLPVVLVLHDLLMVHRTPSEADLEEVVD 204 Query: 180 DIFLPLATR 188 +FLPL R Sbjct: 205 LLFLPLVMR 213 >tr|B0T5I8|B0T5I8_CAUSK Tax_Id=366602 SubName: Full=Transcriptional regulator, TetR family;[Caulobacter sp.] Length = 214 Score = 117 bits (293), Expect = 7e-25 Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 8/186 (4%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG+ LE +L+A W +L GY FT+E+VA R+G++R V+YRRWP+R+ L A I Sbjct: 7 KRRRGAVLEEVLLEAAWTELAAHGYSDFTMESVAKRAGASRPVIYRRWPTRVSLAAAAIS 66 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H + + + V D G +RD++ +L +F D D + F Sbjct: 67 HYVKANPLSVADMGGVRDELCLLLRKFADRAPPRLMRLLFEMTD--DMAAAQDNFTHERF 124 Query: 122 LSDGPTAMETIVERAVQRGEL--AAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 D A+E I++R V RGE+ A + P RI+ P LV+HE+ +T + I EIVD Sbjct: 125 PQD---ALEAIIDRGVARGEIDPARLTP-RIIYAPVSLVQHEIAVTAKQITDQAIHEIVD 180 Query: 180 DIFLPL 185 IF+PL Sbjct: 181 QIFMPL 186 >tr|C6D7M1|C6D7M1_PAESJ Tax_Id=324057 SubName: Full=Transcriptional regulator, TetR family;[Paenibacillus sp.] Length = 213 Score = 115 bits (287), Expect = 4e-24 Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDL-LKAVIR 61 RRRG LE+AIL A W++L E GY T+EAVATR+ + ++ +YRRWP++ L + A+I+ Sbjct: 21 RRRGDVLENAILTAAWEELRETGYSKMTMEAVATRAKTNKTAVYRRWPNKAKLVIAAMIK 80 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H + + PDTG+LRDDV++++ + K Sbjct: 81 HMPK-PSLDTPDTGSLRDDVLSLMDRIIKPMQLIGAETIHGLMVDLHGDEFHAKMTLSPR 139 Query: 122 LSDG-PTAMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 D AM I++ A +RGE+ P R+++LP DLVR+ELL T T + + I EIVD Sbjct: 140 AEDPLSIAMTNILKNAEKRGEVILEGLPERVITLPVDLVRYELLTTHTPLTDEAILEIVD 199 Query: 180 DIFLPLATRSGQE 192 I+LPL ++ ++ Sbjct: 200 TIYLPLVWKTSKQ 212 >tr|B8GGH6|B8GGH6_METPE Tax_Id=521011 SubName: Full=Transcriptional regulator, TetR family;[Methanosphaerula palustris] Length = 215 Score = 113 bits (282), Expect = 1e-23 Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 6/188 (3%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG LE+AIL A WD+L + GY T+E VA R+ + ++VLYRRW ++ L+ A I Sbjct: 26 RRRGEILEAAILQAAWDELFDGGYTHLTMEGVAARARTNKAVLYRRWANKAKLVAAAISK 85 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPD---GSPKQLRD 119 VPDTG LR+DV+ +L + + D P+++ Sbjct: 86 HVPRPTGDVPDTGDLRNDVLILLHGIAQPLQIIGAETMHGLMVEYLDKDMISSFPQRMHP 145 Query: 120 LFLSDGPTAMETIVERAVQRGE--LAAVPPARIVSLPADLVRHELLMTMTAVPADTIREI 177 S TAM TI++ A RGE L + P R++SLPA L+++E+L T + TI EI Sbjct: 146 GTESRLTTAMMTILKNADTRGEVKLDTISP-RVISLPAVLLQYEILTTHEPIADTTIDEI 204 Query: 178 VDDIFLPL 185 VDDIFLPL Sbjct: 205 VDDIFLPL 212 >tr|A1AYD7|A1AYD7_PARDP Tax_Id=318586 SubName: Full=Transcriptional regulator, TetR family;[Paracoccus denitrificans] Length = 208 Score = 111 bits (277), Expect = 5e-23 Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 4/188 (2%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG ALE AILDA W++L GY+ T+EAVA R+G++R VL RRW S L A I Sbjct: 12 RRRRGPALEEAILDAAWEELTTHGYEKLTLEAVARRAGTSRPVLSRRWDSLSKLASAAIV 71 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 + VPD G LR++++ +L + + S +R Sbjct: 72 RYALHNPTEVPDLGGLREELILLLRQIARRSSPKVVRLIYEMRKDLEAAFSSFADIRTQV 131 Query: 122 LSDGPTAMETIVERAVQRGELAA--VPPARIVSLPADLVRHELLMTMTAVPADTIREIVD 179 G M+ I++RAV RGE+ V P R++ LP DL RHE++MT + I EIVD Sbjct: 132 GVAG-YPMQQILDRAVARGEVRPDFVTP-RLLRLPVDLARHEMMMTFQPLAESDILEIVD 189 Query: 180 DIFLPLAT 187 DI LPL T Sbjct: 190 DIVLPLWT 197 >tr|D1XIG5|D1XIG5_9ACTO Tax_Id=647653 SubName: Full=Transcriptional regulator, TetR family;[Streptomyces sp. ACTE] Length = 230 Score = 110 bits (274), Expect = 1e-22 Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 4/185 (2%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDL-LKAVIR 61 RRRG LE AIL A ++L E GY G T+E VA R+ + ++ LYRRWP R +L + A Sbjct: 29 RRRGEELERAILAATLEELAEVGYAGLTMERVAARARTGKATLYRRWPGRAELVVDACAA 88 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 HR + +PDTG LR DV+ L + + +R+ Sbjct: 89 HR--LSDADLPDTGALRTDVITALRRLSARLAASHGDILRGLLTEVMHDPEFARLVRERV 146 Query: 122 LSDGPTAMETIVERAVQRGELAA-VPPARIVSLPADLVRHELLMTMTAVPADTIREIVDD 180 + GP A++ ++ RAV RGE+ VP +R ++ DL+R+ L+ +P + + EIVDD Sbjct: 147 HTAGPGAIQAVLWRAVARGEIEPWVPASRRATVAVDLLRNHYLLHGAPIPEEVVTEIVDD 206 Query: 181 IFLPL 185 ++LPL Sbjct: 207 VYLPL 211 >tr|D1VF78|D1VF78_9ACTO Tax_Id=298654 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp. EuI1c] Length = 222 Score = 109 bits (272), Expect = 2e-22 Identities = 75/186 (40%), Positives = 101/186 (54%), Gaps = 5/186 (2%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG+ALE AI+ A W++L GY G TIE VA R+ ++R+VLYRRW +R L+ A + Sbjct: 30 RRRGAALERAIIAAVWEELAAVGYSGLTIEGVAERARTSRTVLYRRWSTRAQLVVAAMT- 88 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 + + +PDTG LR DV+ +LT + + D +RD + Sbjct: 89 QSIPEPADLPDTGDLRTDVITLLTRL-ESRFEGLPADAVRGLLFEVLQDPEAIAIRDQVV 147 Query: 123 SDGPTAMETI-VERAVQRGEL-AAVPPARIVSLPADLVRHELLMTMTA-VPADTIREIVD 179 T + I + RA RGE+ +V R+ SLP DLVR E L VP D I EIVD Sbjct: 148 QPQCTDLVMILLGRAASRGEIDPSVIRRRVASLPKDLVRAEYLTRKDGRVPEDVIAEIVD 207 Query: 180 DIFLPL 185 D+FLPL Sbjct: 208 DVFLPL 213 >tr|B9E1V2|B9E1V2_CLOK1 Tax_Id=583346 SubName: Full=Putative uncharacterized protein;[Clostridium kluyveri] Length = 231 Score = 107 bits (267), Expect = 7e-22 Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 16/195 (8%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG LE AIL+A W++L E GY T+E++ATR+G+ +SVLYRRW + +L+ A +R Sbjct: 36 KRRRGEVLEEAILNAAWEELTETGYTHMTMESIATRAGTNKSVLYRRWADKSELVIAALR 95 Query: 62 HRGEIDRI--PVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEP-------DG 112 + +I +P+TG LR DV A L + EP Sbjct: 96 -KYYFPKITNEIPNTGNLRGDVYAYL---HARVEPLKTIGTETIRGLMMEPLVWRMITAS 151 Query: 113 SPKQLRDLFLSDGPTAMETIVERAVQRGE--LAAVPPARIVSLPADLVRHELLMTMTAVP 170 P+ + S AM I++ A RGE L + P RI+SLP DL+++EL+ + + Sbjct: 152 MPQMIERRSESKLTAAMAVILKNAELRGEIRLEKLTP-RIISLPVDLLQYELITKLKPIS 210 Query: 171 ADTIREIVDDIFLPL 185 + I EIVDDIF+PL Sbjct: 211 DEVIAEIVDDIFMPL 225 >tr|A5N8E6|A5N8E6_CLOK5 Tax_Id=431943 SubName: Full=Transcriptional regulator;[Clostridium kluyveri] Length = 203 Score = 107 bits (267), Expect = 7e-22 Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 16/195 (8%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG LE AIL+A W++L E GY T+E++ATR+G+ +SVLYRRW + +L+ A +R Sbjct: 8 KRRRGEVLEEAILNAAWEELTETGYTHMTMESIATRAGTNKSVLYRRWADKSELVIAALR 67 Query: 62 HRGEIDRI--PVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEP-------DG 112 + +I +P+TG LR DV A L + EP Sbjct: 68 -KYYFPKITNEIPNTGNLRGDVYAYL---HARVEPLKTIGTETIRGLMMEPLVWRMITAS 123 Query: 113 SPKQLRDLFLSDGPTAMETIVERAVQRGE--LAAVPPARIVSLPADLVRHELLMTMTAVP 170 P+ + S AM I++ A RGE L + P RI+SLP DL+++EL+ + + Sbjct: 124 MPQMIERRSESKLTAAMAVILKNAELRGEIRLEKLTP-RIISLPVDLLQYELITKLKPIS 182 Query: 171 ADTIREIVDDIFLPL 185 + I EIVDDIF+PL Sbjct: 183 DEVIAEIVDDIFMPL 197 >tr|C6WD21|C6WD21_ACTMD Tax_Id=446462 SubName: Full=Transcriptional regulator, TetR family;[Actinosynnema mirum] Length = 206 Score = 106 bits (265), Expect = 1e-21 Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG LE AILDA WD+L E GYD TI+ VA R+ +++ V+YRRWPSR +++ A Sbjct: 7 RRRGEELERAILDAVWDELDEVGYDRLTIDGVAARARTSKPVIYRRWPSRAEMVLAAWLK 66 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEF---NDXXXXXXXXXXXXXXXYFDEPDGSPKQLRD 119 R P D G LR D++A+ + + F P+ + D Sbjct: 67 RAPSWPGP-EDRGDLRTDLLALFSGIAGQSGLGAARAGDRTGMAWEAFHNPE-VVVLVSD 124 Query: 120 LFLSDGPT--AMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIRE 176 L P A++ +VERAV RGEL + PAR+ +P DL+R E L + + E Sbjct: 125 KLLCPSPLGHALDGVVERAVGRGELPPLELPARVKRVPLDLIRSESLTRCGPLSRRVLEE 184 Query: 177 IVDDIFLPL 185 +VDD+FLPL Sbjct: 185 LVDDVFLPL 193 >tr|A9H5N5|A9H5N5_GLUDA Tax_Id=272568 (tetR)SubName: Full=Putative transcriptional regulator, family tetR;[Gluconacetobacter diazotrophicus] Length = 167 Score = 103 bits (258), Expect = 8e-21 Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 5/169 (2%) Query: 22 IEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRHRGEIDRIPVPDTGTLRDDV 81 +E GY+G T+E VA R+ ++R VL+RRWPSR L A + + I +PD G+LRD++ Sbjct: 1 MERGYEGLTMENVARRAETSRPVLHRRWPSRTALATAALAQQFARANIVIPDMGSLRDEL 60 Query: 82 VAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFLSDGPTAMETIVERAVQRGE 141 +L +D S +R + DG + ++ RA++RGE Sbjct: 61 RLLLRCMSDRAGSRDLQLFFDMQKDLVAERSSFADIRARIV-DG-SQFHAVIGRAIERGE 118 Query: 142 L--AAVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDIFLPLATR 188 + A + P RI SLP DL RHE++MT + D IREIVDDIFLPL R Sbjct: 119 IDPARLTP-RIASLPLDLARHEMMMTFQPLSEDAIREIVDDIFLPLVRR 166 >tr|A9FBT9|A9FBT9_SORC5 Tax_Id=448385 SubName: Full=Transcriptional regulator, TetR family;[Sorangium cellulosum] Length = 188 Score = 102 bits (253), Expect = 3e-20 Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 2/172 (1%) Query: 21 LIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRHRGEIDRIPVPDTGTLRDD 80 ++E G+ T+E+VA R+ + +VLYRRW ++ +L+ A ++HR ++ + VPDTG LR D Sbjct: 1 MVEVGFANLTMESVAARARTGIAVLYRRWANKDELVFAALQHRRDVSPVAVPDTGALRSD 60 Query: 81 VVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDG-SPKQLRDLFLSDGPTAMETIVERAVQR 139 ++A LT +D G +P Q+RD + + +RA R Sbjct: 61 LLAHLTALSDALAGFFAIAAAAAFSGLLAGTGLTPSQVRDKVMDTRKPRVRIPYQRAHDR 120 Query: 140 GELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIREIVDDIFLPLATRSG 190 GE+ P+ ++++P DLVRH+LLM + + I+ IVD++FLPL G Sbjct: 121 GEIDLERIPSAVLAMPYDLVRHDLLMDLRPLKPARIQSIVDELFLPLVQSFG 172 >tr|A4FR08|A4FR08_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator, TetR family;[Saccharopolyspora erythraea] Length = 195 Score = 102 bits (253), Expect = 3e-20 Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 4/187 (2%) Query: 1 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI 60 + RRRG AL +AIL A D+L E GY G T+E VA R+ + ++ +YRRWPSR++L + Sbjct: 8 LPRRRGEALNAAILQATLDELSEVGYAGLTMERVAERARTGKASVYRRWPSRMELAIDAV 67 Query: 61 RHRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDL 120 H P PDTGTLR D++A+L + +LR Sbjct: 68 YHVLPDPSSP-PDTGTLRGDLLALLRRHAETLAGPAGEALRGLLSDVLTDRSRTAELRQH 126 Query: 121 FLSDGPTAMETIVERAVQRGELA--AVPPARIVSLPADLVRHELLMTMTAVPADTIREIV 178 G AM I RAV+RGE+A AV P RI + ++R L +P + I EIV Sbjct: 127 SHGAGRKAMGEITRRAVERGEIAAEAVTPRRI-EVGHAMLRQHFLFQGVPIPDEVIVEIV 185 Query: 179 DDIFLPL 185 D++ +PL Sbjct: 186 DEVLVPL 192 >tr|D3CAZ8|D3CAZ8_9ACTO Tax_Id=648999 SubName: Full=Transcriptional regulator, TetR family;[Micromonospora sp. L5] Length = 193 Score = 99.8 bits (247), Expect = 2e-19 Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 10/195 (5%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG LE AIL A ++L E+GY G T++ VA R+G+ ++ +YRRWP R L A R Sbjct: 3 RRRRGEELEQAILRAAAEELRESGYAGMTMDRVAARAGTNKNAIYRRWPHRAALGVAAYR 62 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H + +P PDTGTLR D + +L N+ + P+ L + Sbjct: 63 HLSDA-AMPNPDTGTLRGDALEMLRLANETWSSPHGAVLRGLLAAAAD---DPELLTLMR 118 Query: 122 LSDGPTAMET----IVERAVQRGEL-AAVPPARIVSLPADLVRHELLMT-MTAVPADTIR 175 G M+ ++ERA RGE AA R+ ++P L+R E M + +VP + + Sbjct: 119 ERSGADTMDRAWTGMLERAAARGEAPAAAVRHRVATVPMMLLRAEYAMRGVPSVPDEVLV 178 Query: 176 EIVDDIFLPLATRSG 190 EIVD++FLPL G Sbjct: 179 EIVDEVFLPLVRGRG 193 >tr|D1XP77|D1XP77_9ACTO Tax_Id=647653 SubName: Full=Transcriptional regulator, TetR family;[Streptomyces sp. ACTE] Length = 215 Score = 99.8 bits (247), Expect = 2e-19 Identities = 76/196 (38%), Positives = 102/196 (52%), Gaps = 14/196 (7%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG+ LE AIL A L E G G T+E VA R+G+ ++ LYRRWP+RL L A R Sbjct: 14 RRRGTELEEAILTAAAAVLTEDGVAGLTMEKVARRAGTNKNTLYRRWPNRLALAVAAYR- 72 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 R DR PDTG+LR D +A+L + G+P+ L +L Sbjct: 73 RLAADRTAPPDTGSLRGDALALLRRADS---SWASPMGEILRGLLAAAGGAPELLAELRP 129 Query: 123 SDGPTAME----TIVERAVQRGELAAVPPA---RIVSLPADLVRHELLMT-MTAVPADTI 174 A++ T++ RAV RGE A P A R+ S P L+R+E + + AVP + Sbjct: 130 DADGNAVDAAWLTLIGRAVARGE--ARPEALHPRVASAPTALLRNEYVTRGVPAVPDAVL 187 Query: 175 REIVDDIFLPLATRSG 190 EIVD++FLPL G Sbjct: 188 VEIVDEVFLPLVRGRG 203 >tr|D1S797|D1S797_9ACTO Tax_Id=644283 SubName: Full=Transcriptional regulator, TetR family;[Micromonospora aurantiaca ATCC 27029] Length = 193 Score = 99.8 bits (247), Expect = 2e-19 Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 10/195 (5%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG LE AIL A ++L E+GY G T++ VA R+G+ ++ +YRRWP R L A R Sbjct: 3 RRRRGEELEQAILRAAAEELRESGYAGMTMDRVAARAGTNKNAIYRRWPHRAALGVAAYR 62 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 H + +P PDTGTLR D + +L N+ + P+ L + Sbjct: 63 HLSDA-AMPNPDTGTLRGDALEMLRLANETWSSPHGAVLRGLLAAAAD---DPELLTLMR 118 Query: 122 LSDGPTAMET----IVERAVQRGEL-AAVPPARIVSLPADLVRHELLMT-MTAVPADTIR 175 G M+ ++ERA RGE AA R+ ++P L+R E M + +VP + + Sbjct: 119 ERSGADTMDRAWIGMLERAAARGEAPAAAVRHRVATVPMMLLRAEYAMRGVPSVPDEVLV 178 Query: 176 EIVDDIFLPLATRSG 190 EIVD++FLPL G Sbjct: 179 EIVDEVFLPLVRGRG 193 >tr|Q5YRF1|Q5YRF1_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 203 Score = 99.0 bits (245), Expect = 3e-19 Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 12/190 (6%) Query: 2 QRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIR 61 +RRRG+ALE AIL A +L+E+GY G T+E VA R+ + ++ +YRRWP RL L AV Sbjct: 13 RRRRGAALEEAILTAAAAELLESGYAGLTMEKVAARARTNKNAIYRRWPHRLAL--AVAA 70 Query: 62 HRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPK---QLR 118 +R + PDTG LR+D + +L N G+P+ QL Sbjct: 71 YRQVATAVAPPDTGDLREDALELLRRAN---RHWSSPLGAILRELMAAAGGAPEFLAQLP 127 Query: 119 DLFLSDGPTAMETIVERAVQRGELA--AVPPARIVSLPADLVRHELLMT-MTAVPADTIR 175 D T++ RAV RG+ A A+ P R+ ++P L+R+E ++ + P + Sbjct: 128 DQSTDAVAAVWLTVLGRAVARGQAAPEALHP-RVATVPIVLLRNEFVVRGVPTAPEGVLT 186 Query: 176 EIVDDIFLPL 185 EIVD+IFLPL Sbjct: 187 EIVDEIFLPL 196 >tr|C6WI37|C6WI37_ACTMD Tax_Id=446462 SubName: Full=Regulatory protein TetR;[Actinosynnema mirum] Length = 188 Score = 95.5 bits (236), Expect = 3e-18 Identities = 72/187 (38%), Positives = 95/187 (50%), Gaps = 8/187 (4%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG+ LE A+LDA +L+E+GY T+E VA R+G+ ++ LYRRWP R L A R Sbjct: 2 RRRGAELERAVLDAATAELLESGYRALTMERVAKRAGTNKNALYRRWPHRAALAAAAYRA 61 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEF-NDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLF 121 D PDTG LR DV+A+L D E +LR+L Sbjct: 62 L-VADTTRTPDTGDLRADVLALLRGLAADLASPRGEVLTGMVAGIAAEAPELLAELRELG 120 Query: 122 LSDGPTAMETIVERAVQRGELAAVPPA---RIVSLPADLVRHELLMTMTAVPADTIREIV 178 G T++ RAV RGE A P A R+ LP L+R+E L T + + EIV Sbjct: 121 AQAGSGVWLTVLGRAVARGE--ARPEALLPRVAGLPLVLLRNEFL-TGGPPTDEALVEIV 177 Query: 179 DDIFLPL 185 D ++LPL Sbjct: 178 DQVYLPL 184 >tr|Q2JF52|Q2JF52_FRASC Tax_Id=106370 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 383 Score = 89.7 bits (221), Expect = 2e-16 Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 2/185 (1%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 R R + + AI A D L E GYDG T++ VATR+ + ++ +YRRWPS+L L+ + Sbjct: 199 RPRDESRDQAIRTATLDLLAEVGYDGVTMDRVATRARAGKATIYRRWPSKLALVMDAVNA 258 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 E R+P PD G+LR D++ LT F+D G LR Sbjct: 259 FTE-QRMPAPDNGSLRLDILEFLTSFHDAIRGDRGRILAELISEMPRNPGLRDALRRGLW 317 Query: 123 SDGPTAMETIVERAVQRGELAA-VPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDI 181 + E I+ER + RGE+ V ++ L ++ +L+T V + IVDDI Sbjct: 318 MQRQASSEAIIERGIARGEVRPDVDRTVLIELGTAVILQRVLLTGDPVDQTFLEMIVDDI 377 Query: 182 FLPLA 186 + A Sbjct: 378 VIRYA 382 >tr|Q0RRD9|Q0RRD9_FRAAA Tax_Id=326424 SubName: Full=Putative TetR-family transcriptional regulator;[Frankia alni] Length = 198 Score = 89.4 bits (220), Expect = 2e-16 Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 2/185 (1%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 R R + + AI A D L E GYDG T++ VA R+ + ++ +YRRWPS+L ++ I Sbjct: 14 RPRDESRDHAIRSATLDLLAELGYDGVTMDRVAARARAGKATIYRRWPSKLAMVMDAINA 73 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 E +R+P PDTG+LR D+V LT F++ LR Sbjct: 74 FAE-ERMPTPDTGSLRLDIVEFLTSFHEAIRGGRGRIIAELISEMPRNPDLRNALRGGLW 132 Query: 123 SDGPTAMETIVERAVQRGELAA-VPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDI 181 + + IVE A+ RGEL + A ++ + ++ +L+T V + IVDDI Sbjct: 133 TQREASSHAIVEHAIARGELRPDIDHAILMEIGTAIILQRVLLTGETVDRPFLESIVDDI 192 Query: 182 FLPLA 186 + A Sbjct: 193 VIRYA 197 >tr|A4TC40|A4TC40_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 193 Score = 89.0 bits (219), Expect = 3e-16 Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 2/186 (1%) Query: 1 MQRRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVI 60 M RRRG+ L++AI A D L G + T++AVA +G+++ VLYRRWP R LL+ + Sbjct: 2 MTRRRGAELDAAIRSAVLDLLAGHGPEAVTMDAVAVAAGTSKPVLYRRWPDRRALLRDTL 61 Query: 61 RHRGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDL 120 P PDTGT R D++AVL + R Sbjct: 62 MAVASTS-FPRPDTGTFRGDLLAVLRAWAQLFTGDTGPLMRSVIVAVASDPDLESTFRSD 120 Query: 121 FLSDGPTAMETIVERAVQRGELAAVPPARIV-SLPADLVRHELLMTMTAVPADTIREIVD 179 L M T++ RAV+RGE+ P +V L ++ H LL+T + + + ++VD Sbjct: 121 VLGMRKAEMTTLIGRAVERGEVRPDVPVELVRELGQSVLWHRLLITGDPITDELVTQLVD 180 Query: 180 DIFLPL 185 ++ +P+ Sbjct: 181 EVLIPV 186 >tr|D0L4B0|D0L4B0_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 196 Score = 88.2 bits (217), Expect = 5e-16 Identities = 70/195 (35%), Positives = 95/195 (48%), Gaps = 10/195 (5%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG+ LE A+ A ++ E+G G T E VA R+G+++ VLYRRWP++ +L A I Sbjct: 5 RRRGAELEHALHAAILAEIDESGIAGLTYEGVAERAGTSKPVLYRRWPTKPKMLLAAIT- 63 Query: 63 RGEIDRIPV----PDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLR 118 DR V PD G+L D+ A LT D P LR Sbjct: 64 AVFADRTQVLDDLPDAGSLTADLAAPLTTLRTLFTRAERRMMMVVLAELDPEAAEP--LR 121 Query: 119 DLFLSDGPTAMETIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPADTIREI 177 ++ + IVERA RGEL VP ++SLP DL RH++ M + D +R I Sbjct: 122 EMLFTRMGDITTPIVERARARGELGDVPLGPEVLSLPFDLARHDIFM-RGVLTDDRVRMI 180 Query: 178 VDDIFLPL-ATRSGQ 191 + I PL T SG+ Sbjct: 181 TEQITAPLWVTLSGR 195 >tr|A8L9W4|A8L9W4_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 200 Score = 86.3 bits (212), Expect = 2e-15 Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 2/187 (1%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 R R + + AI A + L E GYDG T++ VATR+ + ++ +YRRWPS++ L+ I Sbjct: 14 RPRDESRDGAIRQATLELLAEHGYDGVTMDRVATRAKAGKATIYRRWPSKVALVMDSITQ 73 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 E + +PD+G+LR +++ LT F++ +R+ Sbjct: 74 FTE-QTLQIPDSGSLRTEMILFLTAFHELVGSEQGRIMAEMVSEMPRNPELRAAVRERMW 132 Query: 123 SDGPTAMETIVERAVQRGELA-AVPPARIVSLPADLVRHELLMTMTAVPADTIREIVDDI 181 S E I+ R + RGE+ PA ++ + L+ LL+T V + I +VDD+ Sbjct: 133 SQRKMMSEVIITRGIARGEITPEADPAILMEIGTALILQRLLITGDPVDSAFIEHVVDDV 192 Query: 182 FLPLATR 188 + A+R Sbjct: 193 IIAYASR 199 >tr|A0NJ12|A0NJ12_OENOE Tax_Id=379360 SubName: Full=Transcriptional regulator, AcrR family;[Oenococcus oeni ATCC BAA-1163] Length = 193 Score = 85.9 bits (211), Expect = 2e-15 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 20/194 (10%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDLLKAVIRH 62 RRRG LE+AIL A WDQL + GY TI +A+ +G+ ++ +YRRWP++ L+ + Sbjct: 8 RRRGEKLENAILTAAWDQLNKVGYKDLTITEIASLAGTNKTTIYRRWPNKSLLVVSAFSK 67 Query: 63 RGEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDLFL 122 ++ +P++G LRDD+V + + + +LRD + Sbjct: 68 FVPKPKMQIPNSGNLRDDLVKLFEQLVNQLEFLTSGKFEGLLL---------DRLRDTSI 118 Query: 123 S------DGPTAME----TIVERAVQRGELAAVP-PARIVSLPADLVRHELLMTMTAVPA 171 D A++ I++RA +RGEL R++ LP L+ +E++ T VP Sbjct: 119 DKVFERVDENNALQKFIVIILQRAEKRGELKINQLSQRVLELPFLLLLNEVISTRGIVPK 178 Query: 172 DTIREIVDDIFLPL 185 +++ EIVD LP+ Sbjct: 179 ESLTEIVDQKLLPV 192 >tr|D1BFR0|D1BFR0_SANKS Tax_Id=446469 SubName: Full=Transcriptional regulator;[Sanguibacter keddieii] Length = 224 Score = 85.1 bits (209), Expect = 4e-15 Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 11/191 (5%) Query: 3 RRRGSALESAILDAGWDQLIEAGYDGFTIEAVATRSGSARSVLYRRWPSRLDL-LKAVIR 61 RRR + + AILDA + L+E GY+ T++AVA R+G+ ++ LYRRW S+ L + A+ Sbjct: 19 RRRDESRDEAILDAARELLVERGYENMTMDAVAERAGAGKATLYRRWSSKTQLTVDAITC 78 Query: 62 HR-GEIDRIPVPDTGTLRDDVVAVLTEFNDXXXXXXXXXXXXXXXYFDEPDGSPKQLRDL 120 HR ++ +PDTG+LR D++++ + D+P+ + R Sbjct: 79 HRYADLTADDIPDTGSLRGDLLSI-RQVKHLRSDTEDLMTGLTAAIRDDPEVAAAFQRQ- 136 Query: 121 FLSDGPTAMETIVERAVQRGELAAVPPAR----IVSLPADLVRHELLMTMTAVPADTIRE 176 F+ M ++ RA +RGE +PP R I ++ ++ ++ + T + + + Sbjct: 137 FVEARTRLMRDLLGRAERRGE---IPPGRDLDMIATVAPAMISYQKVTTGKPLDPEYLER 193 Query: 177 IVDDIFLPLAT 187 +VD + +PLAT Sbjct: 194 LVDSVLVPLAT 204 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.320 0.137 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,409,171,811 Number of extensions: 50714394 Number of successful extensions: 134700 Number of sequences better than 10.0: 2390 Number of HSP's gapped: 135285 Number of HSP's successfully gapped: 2401 Length of query: 193 Length of database: 4,236,830,644 Length adjustment: 130 Effective length of query: 63 Effective length of database: 2,610,808,324 Effective search space: 164480924412 Effective search space used: 164480924412 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 77 (34.3 bits)