BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3744 (318 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QYQ5|A0QYQ5_MYCS2 Tax_Id=246196 (xerD)SubName: Full=Tyrosin... 561 e-158 tr|Q1B7T5|Q1B7T5_MYCSS Tax_Id=164756 SubName: Full=Tyrosine reco... 503 e-140 tr|A1UH72|A1UH72_MYCSK Tax_Id=189918 SubName: Full=Tyrosine reco... 503 e-140 tr|A3Q0Q9|A3Q0Q9_MYCSJ Tax_Id=164757 SubName: Full=Tyrosine reco... 501 e-140 tr|D5P365|D5P365_9MYCO Tax_Id=525368 (xerD)SubName: Full=Integra... 486 e-135 tr|A1TA79|A1TA79_MYCVP Tax_Id=350058 SubName: Full=Tyrosine reco... 483 e-134 tr|A4T9Z2|A4T9Z2_MYCGI Tax_Id=350054 SubName: Full=Tyrosine reco... 480 e-133 tr|A0QH66|A0QH66_MYCA1 Tax_Id=243243 (xerD)SubName: Full=Tyrosin... 477 e-133 tr|B2HR71|B2HR71_MYCMM Tax_Id=216594 (xerD)SubName: Full=Integra... 476 e-132 sp|P67636|XERD_MYCTU Tax_Id=1773 (xerD)RecName: Full=Tyrosine re... 475 e-132 sp|P67637|XERD_MYCBO Tax_Id=1765 (xerD)RecName: Full=Tyrosine re... 475 e-132 tr|C6DRX2|C6DRX2_MYCTK Tax_Id=478434 SubName: Full=Integrase;[My... 475 e-132 tr|C1ANX3|C1ANX3_MYCBT Tax_Id=561275 (xerD)SubName: Full=Site-sp... 475 e-132 tr|A5WN20|A5WN20_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 475 e-132 tr|A5U359|A5U359_MYCTA Tax_Id=419947 (xerD)SubName: Full=Tyrosin... 475 e-132 tr|A1KJB7|A1KJB7_MYCBP Tax_Id=410289 SubName: Full=Probable inte... 475 e-132 tr|D6G7X8|D6G7X8_MYCTU Tax_Id=478435 SubName: Full=Integrase;[My... 475 e-132 tr|D6FU02|D6FU02_MYCTU Tax_Id=611304 SubName: Full=Integrase;[My... 475 e-132 tr|D6FHX9|D6FHX9_MYCTU Tax_Id=611303 SubName: Full=Integrase;[My... 475 e-132 tr|D6F4D2|D6F4D2_MYCTU Tax_Id=611302 SubName: Full=Tyrosine reco... 475 e-132 tr|D5ZHJ4|D5ZHJ4_MYCTU Tax_Id=537210 SubName: Full=Integrase;[My... 475 e-132 tr|D5Z4I7|D5Z4I7_MYCTU Tax_Id=537209 SubName: Full=Tyrosine reco... 475 e-132 tr|D5YT46|D5YT46_MYCTU Tax_Id=515616 SubName: Full=Tyrosine reco... 475 e-132 tr|D5YFL2|D5YFL2_MYCTU Tax_Id=520140 SubName: Full=Site-specific... 475 e-132 tr|D5Y402|D5Y402_MYCTU Tax_Id=520141 SubName: Full=Site-specific... 475 e-132 tr|D5XTY2|D5XTY2_MYCTU Tax_Id=515617 SubName: Full=Integrase;[My... 475 e-132 tr|A4KHL4|A4KHL4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 475 e-132 tr|A2VII4|A2VII4_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 475 e-132 tr|Q740E3|Q740E3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 474 e-132 tr|A0PPB0|A0PPB0_MYCUA Tax_Id=362242 (xerD)SubName: Full=Integra... 474 e-132 sp|Q49890|XERD_MYCLE Tax_Id=1769 (xerD)RecName: Full=Tyrosine re... 454 e-126 tr|B8ZRH7|B8ZRH7_MYCLB Tax_Id=561304 SubName: Full=Integrase/rec... 454 e-126 tr|B1MB26|B1MB26_MYCA9 Tax_Id=561007 SubName: Full=Tyrosine reco... 436 e-120 tr|D5PL16|D5PL16_COREQ Tax_Id=525370 (xerD)SubName: Full=Tyrosin... 419 e-115 tr|Q0SI76|Q0SI76_RHOSR Tax_Id=101510 SubName: Full=Tyrosine reco... 410 e-112 tr|C3JWI6|C3JWI6_RHOER Tax_Id=596309 (xerD)SubName: Full=Tyrosin... 405 e-111 tr|C1A033|C1A033_RHOE4 Tax_Id=234621 (xerD)SubName: Full=Tyrosin... 404 e-111 tr|D5UQZ2|D5UQZ2_TSUPA Tax_Id=521096 SubName: Full=Tyrosine reco... 387 e-105 tr|Q5YY88|Q5YY88_NOCFA Tax_Id=37329 (xerD)SubName: Full=Putative... 383 e-104 tr|D0L944|D0L944_GORB4 Tax_Id=526226 SubName: Full=Tyrosine reco... 366 2e-99 tr|D2Q3L1|D2Q3L1_KRIFD Tax_Id=479435 SubName: Full=Tyrosine reco... 350 2e-94 tr|C7MZG5|C7MZG5_SACVD Tax_Id=471857 SubName: Full=Tyrosine reco... 349 3e-94 tr|A4FKA7|A4FKA7_SACEN Tax_Id=405948 (xerD)SubName: Full=Integra... 347 2e-93 tr|D2S8M3|D2S8M3_GEOOG Tax_Id=526225 SubName: Full=Tyrosine reco... 345 6e-93 tr|C6WA61|C6WA61_ACTMD Tax_Id=446462 SubName: Full=Tyrosine reco... 338 5e-91 >tr|A0QYQ5|A0QYQ5_MYCS2 Tax_Id=246196 (xerD)SubName: Full=Tyrosine recombinase XerD;[Mycobacterium smegmatis] Length = 318 Score = 561 bits (1446), Expect = e-158 Identities = 293/318 (92%), Positives = 293/318 (92%) Query: 1 MTGTSALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAE 60 MTGTSALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAE Sbjct: 1 MTGTSALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAE 60 Query: 61 SDVSDFLVALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTP 120 SDVSDFLVALRRGDPDAGVTAL GLHRFAAAEGLTENDVARAVKPPTP Sbjct: 61 SDVSDFLVALRRGDPDAGVTALSAVSAARAVVAVRGLHRFAAAEGLTENDVARAVKPPTP 120 Query: 121 SRRLPKSLTLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVD 180 SRRLPKSLTLDEVLALLEAAGGDSEADSP YSTGARISEAVGLDVDDVD Sbjct: 121 SRRLPKSLTLDEVLALLEAAGGDSEADSPLTLRNRALLELLYSTGARISEAVGLDVDDVD 180 Query: 181 TQARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 TQARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR Sbjct: 181 TQARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 Query: 241 QSAWQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 QSAWQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM Sbjct: 241 QSAWQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 Query: 301 VTVHTLREVWAGAHPRAQ 318 VTVHTLREVWAGAHPRAQ Sbjct: 301 VTVHTLREVWAGAHPRAQ 318 >tr|Q1B7T5|Q1B7T5_MYCSS Tax_Id=164756 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 503 bits (1294), Expect = e-140 Identities = 257/318 (80%), Positives = 273/318 (85%) Query: 1 MTGTSALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAE 60 M ++ R+ LD+Q+QGYLDHLTIERGVAANTLSSYRRDLRRY+EHL RG++DLA+V E Sbjct: 1 MAPSAVRRSALDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTE 60 Query: 61 SDVSDFLVALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTP 120 SDVSDFLVALRRGDPD G AL GLHRFA AEGLT+ DVARAVKPPTP Sbjct: 61 SDVSDFLVALRRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTP 120 Query: 121 SRRLPKSLTLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVD 180 RRLPKSL++DEVLALL+ AGGDSEAD P YSTGARISEAVGLD+DDVD Sbjct: 121 GRRLPKSLSIDEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVD 180 Query: 181 TQARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 T ARSVLL GKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR Sbjct: 181 THARSVLLRGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 Query: 241 QSAWQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 QSAWQVLQD+AERAGI SAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM Sbjct: 241 QSAWQVLQDAAERAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 Query: 301 VTVHTLREVWAGAHPRAQ 318 VTVH LREVWAGAHPRA+ Sbjct: 301 VTVHALREVWAGAHPRAR 318 >tr|A1UH72|A1UH72_MYCSK Tax_Id=189918 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 503 bits (1294), Expect = e-140 Identities = 257/318 (80%), Positives = 273/318 (85%) Query: 1 MTGTSALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAE 60 M ++ R+ LD+Q+QGYLDHLTIERGVAANTLSSYRRDLRRY+EHL RG++DLA+V E Sbjct: 1 MAPSAVRRSALDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTE 60 Query: 61 SDVSDFLVALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTP 120 SDVSDFLVALRRGDPD G AL GLHRFA AEGLT+ DVARAVKPPTP Sbjct: 61 SDVSDFLVALRRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTP 120 Query: 121 SRRLPKSLTLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVD 180 RRLPKSL++DEVLALL+ AGGDSEAD P YSTGARISEAVGLD+DDVD Sbjct: 121 GRRLPKSLSIDEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVD 180 Query: 181 TQARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 T ARSVLL GKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR Sbjct: 181 THARSVLLRGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 Query: 241 QSAWQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 QSAWQVLQD+AERAGI SAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM Sbjct: 241 QSAWQVLQDAAERAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 Query: 301 VTVHTLREVWAGAHPRAQ 318 VTVH LREVWAGAHPRA+ Sbjct: 301 VTVHALREVWAGAHPRAR 318 >tr|A3Q0Q9|A3Q0Q9_MYCSJ Tax_Id=164757 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 501 bits (1291), Expect = e-140 Identities = 256/318 (80%), Positives = 273/318 (85%) Query: 1 MTGTSALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAE 60 M ++ R+ LD+Q+QGYLDHLTIERGVAANTLSSYRRDLRRY+EHL RG++DLA+V E Sbjct: 1 MAPSAVRRSALDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTE 60 Query: 61 SDVSDFLVALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTP 120 SDVSDFLVALRRGDPD G AL GLHRFA AEGLT+ DVARAVKPPTP Sbjct: 61 SDVSDFLVALRRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTP 120 Query: 121 SRRLPKSLTLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVD 180 RRLPKSL++DEVLALL+ AGGDSEAD P YSTGARISEAVGLD+DDVD Sbjct: 121 GRRLPKSLSIDEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVD 180 Query: 181 TQARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 T ARSVLL GKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR Sbjct: 181 THARSVLLRGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 Query: 241 QSAWQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 QSAWQVLQD+A+RAGI SAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM Sbjct: 241 QSAWQVLQDAADRAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 Query: 301 VTVHTLREVWAGAHPRAQ 318 VTVH LREVWAGAHPRA+ Sbjct: 301 VTVHALREVWAGAHPRAR 318 >tr|D5P365|D5P365_9MYCO Tax_Id=525368 (xerD)SubName: Full=Integrase/recombinase XerD;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 313 Score = 486 bits (1252), Expect = e-135 Identities = 249/310 (80%), Positives = 263/310 (84%) Query: 9 AVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLV 68 A LD Q+QGYLDHLTIERGVAANTLSSYRRDLRRY +HL RGI DLA+V E DVS+FLV Sbjct: 4 AALDTQLQGYLDHLTIERGVAANTLSSYRRDLRRYTKHLSDRGIHDLAKVGEDDVSEFLV 63 Query: 69 ALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSL 128 ALRRGDPDAG AL GLHRFAAAEGL E DVARAV+PPTP RRLPKSL Sbjct: 64 ALRRGDPDAGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPGRRLPKSL 123 Query: 129 TLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLL 188 T+D+VLALLE AGGDS +D P YSTGARISEAVGLDVDDVD++ARSVLL Sbjct: 124 TIDQVLALLEGAGGDSASDGPLTLRNRALLELLYSTGARISEAVGLDVDDVDSRARSVLL 183 Query: 189 HGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQ 248 GKGGKQRLVP+GRPAV ALDAYLVRGRPDLARRGRGTPAIFLN RGGRLSRQSAWQVLQ Sbjct: 184 RGKGGKQRLVPVGRPAVQALDAYLVRGRPDLARRGRGTPAIFLNVRGGRLSRQSAWQVLQ 243 Query: 249 DSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLRE 308 D+AERAGI+S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYTMVTVH LRE Sbjct: 244 DAAERAGISSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVTVHALRE 303 Query: 309 VWAGAHPRAQ 318 VWAGAHPRAQ Sbjct: 304 VWAGAHPRAQ 313 >tr|A1TA79|A1TA79_MYCVP Tax_Id=350058 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium vanbaalenii] Length = 317 Score = 483 bits (1243), Expect = e-134 Identities = 249/310 (80%), Positives = 262/310 (84%) Query: 9 AVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLV 68 A LD+Q QGYLDHL IERGVAANTLSSYRRDLRRYAEHL RG+ DLA VAE+DVS+FLV Sbjct: 8 AALDDQFQGYLDHLAIERGVAANTLSSYRRDLRRYAEHLASRGVTDLAGVAEADVSEFLV 67 Query: 69 ALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSL 128 +LRRGDPD GV L GLHRFAAAEG+T DVAR VKPPTP RRLPKSL Sbjct: 68 SLRRGDPDNGVVPLSAVSAARAVIAVRGLHRFAAAEGITTVDVAREVKPPTPGRRLPKSL 127 Query: 129 TLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLL 188 ++DEVLALLEAAGGD EAD P YSTGARISEAVGLDVDDVDT+ARSVLL Sbjct: 128 SIDEVLALLEAAGGDGEADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTEARSVLL 187 Query: 189 HGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQ 248 GKGGKQRL+PIGRPAVSALD YLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQ Sbjct: 188 RGKGGKQRLIPIGRPAVSALDNYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQ 247 Query: 249 DSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLRE 308 D+AERAGI + VSPH LRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTV LRE Sbjct: 248 DAAERAGITATVSPHVLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVTALRE 307 Query: 309 VWAGAHPRAQ 318 VWAGAHPRA+ Sbjct: 308 VWAGAHPRAR 317 >tr|A4T9Z2|A4T9Z2_MYCGI Tax_Id=350054 SubName: Full=Tyrosine recombinase XerD;[Mycobacterium gilvum] Length = 314 Score = 480 bits (1235), Expect = e-133 Identities = 246/310 (79%), Positives = 263/310 (84%) Query: 9 AVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLV 68 AVLD Q+QGYLDHL IERGVAANTLSSYRRDLRRYAEHL+ RG+ DLA V E+DVS+FLV Sbjct: 5 AVLDGQLQGYLDHLAIERGVAANTLSSYRRDLRRYAEHLKARGVGDLAAVTETDVSEFLV 64 Query: 69 ALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSL 128 ALR GDPD GV L GLHRFAAAEG+ DVAR VKPPTPSRRLPKSL Sbjct: 65 ALRLGDPDGGVVPLSAVSAARALIAVRGLHRFAAAEGIAAIDVARDVKPPTPSRRLPKSL 124 Query: 129 TLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLL 188 ++DEVLALLEAAGGDSEADSP YSTGARISEAVGLD+DDVDT ARSVLL Sbjct: 125 SIDEVLALLEAAGGDSEADSPLTLRNRALLELLYSTGARISEAVGLDIDDVDTSARSVLL 184 Query: 189 HGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQ 248 GKGGKQRL+PIGRPAV+AL+ YLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQ Sbjct: 185 RGKGGKQRLIPIGRPAVTALETYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQ 244 Query: 249 DSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLRE 308 D+A RAG+ + VSPH LRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTV+ LRE Sbjct: 245 DAAGRAGVTATVSPHVLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVNALRE 304 Query: 309 VWAGAHPRAQ 318 VWAGAHPRA+ Sbjct: 305 VWAGAHPRAR 314 >tr|A0QH66|A0QH66_MYCA1 Tax_Id=243243 (xerD)SubName: Full=Tyrosine recombinase XerD;[Mycobacterium avium] Length = 313 Score = 477 bits (1228), Expect = e-133 Identities = 246/308 (79%), Positives = 259/308 (84%) Query: 11 LDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVAL 70 L+ Q+QGYLDHLTIERGVAANTLSSYRRDLRRY +HL RGI DLA+V E DVSDFLVAL Sbjct: 6 LETQLQGYLDHLTIERGVAANTLSSYRRDLRRYTKHLSDRGISDLAKVGEDDVSDFLVAL 65 Query: 71 RRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTL 130 RRGDPD G AL GLHRF AAEGL E DVARAV+PPTP RRLPKSLT+ Sbjct: 66 RRGDPDTGAAALSAVSAARALIAVRGLHRFLAAEGLAELDVARAVRPPTPGRRLPKSLTI 125 Query: 131 DEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHG 190 D+VLALLEAAGG+S AD P YSTGARISEAVGLDVDDVDTQARSVLL G Sbjct: 126 DQVLALLEAAGGESPADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARSVLLRG 185 Query: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDS 250 KGGKQRLVPIGRPAV+ALDAYLVRGR +LARRGRGTPAIFLN RGGRLSRQSAWQVLQD+ Sbjct: 186 KGGKQRLVPIGRPAVAALDAYLVRGRSELARRGRGTPAIFLNVRGGRLSRQSAWQVLQDA 245 Query: 251 AERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVW 310 AERAGI S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYTMVTVH LREVW Sbjct: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVTVHALREVW 305 Query: 311 AGAHPRAQ 318 A AHPRA+ Sbjct: 306 AEAHPRAR 313 >tr|B2HR71|B2HR71_MYCMM Tax_Id=216594 (xerD)SubName: Full=Integrase/recombinase, XerD;[Mycobacterium marinum] Length = 313 Score = 476 bits (1226), Expect = e-132 Identities = 242/307 (78%), Positives = 260/307 (84%) Query: 11 LDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVAL 70 LD Q+QGYLDHL IERGVAANTLSSYRRDLRRY++HL RGI DLA+V E DVS+FLVAL Sbjct: 6 LDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDLAKVGEDDVSEFLVAL 65 Query: 71 RRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTL 130 RRGDP++GV L GLHRFAAAEGL DVARAV+PPTP RRLPKSLT+ Sbjct: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFAAAEGLAALDVARAVRPPTPGRRLPKSLTI 125 Query: 131 DEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHG 190 DEVLALLE AGGD+ AD P YSTG+RISEAVGLDVDD+DTQAR+VLL G Sbjct: 126 DEVLALLEGAGGDNPADGPLTLRNRALLELLYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 Query: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDS 250 KGGKQRLVP+GRPAV ALDAYLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQVLQD+ Sbjct: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 Query: 251 AERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVW 310 AERAGI S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVW Sbjct: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 Query: 311 AGAHPRA 317 AGAHPRA Sbjct: 306 AGAHPRA 312 >sp|P67636|XERD_MYCTU Tax_Id=1773 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >sp|P67637|XERD_MYCBO Tax_Id=1765 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium bovis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|C6DRX2|C6DRX2_MYCTK Tax_Id=478434 SubName: Full=Integrase;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|C1ANX3|C1ANX3_MYCBT Tax_Id=561275 (xerD)SubName: Full=Site-specific tyrosine recombinase;[Mycobacterium bovis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|A5WN20|A5WN20_MYCTF Tax_Id=336982 SubName: Full=Hypothetical integrase/recombinase;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|A5U359|A5U359_MYCTA Tax_Id=419947 (xerD)SubName: Full=Tyrosine recombinase;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|A1KJB7|A1KJB7_MYCBP Tax_Id=410289 SubName: Full=Probable integrase/recombinase;[Mycobacterium bovis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D6G7X8|D6G7X8_MYCTU Tax_Id=478435 SubName: Full=Integrase;[Mycobacterium tuberculosis KZN 605] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D6FU02|D6FU02_MYCTU Tax_Id=611304 SubName: Full=Integrase;[Mycobacterium tuberculosis K85] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D6FHX9|D6FHX9_MYCTU Tax_Id=611303 SubName: Full=Integrase;[Mycobacterium tuberculosis CPHL_A] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLVELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D6F4D2|D6F4D2_MYCTU Tax_Id=611302 SubName: Full=Tyrosine recombinase XerD;[Mycobacterium tuberculosis T46] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D5ZHJ4|D5ZHJ4_MYCTU Tax_Id=537210 SubName: Full=Integrase;[Mycobacterium tuberculosis T17] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D5Z4I7|D5Z4I7_MYCTU Tax_Id=537209 SubName: Full=Tyrosine recombinase xerD;[Mycobacterium tuberculosis GM 1503] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D5YT46|D5YT46_MYCTU Tax_Id=515616 SubName: Full=Tyrosine recombinase xerD;[Mycobacterium tuberculosis 02_1987] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D5YFL2|D5YFL2_MYCTU Tax_Id=520140 SubName: Full=Site-specific tyrosine recombinase XerD;[Mycobacterium tuberculosis EAS054] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D5Y402|D5Y402_MYCTU Tax_Id=520141 SubName: Full=Site-specific tyrosine recombinase XerD;[Mycobacterium tuberculosis T85] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|D5XTY2|D5XTY2_MYCTU Tax_Id=515617 SubName: Full=Integrase;[Mycobacterium tuberculosis T92] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|A4KHL4|A4KHL4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical integrase/recombinase;[Mycobacterium tuberculosis str. Haarlem] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|A2VII4|A2VII4_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 241/305 (79%), Positives = 260/305 (85%) Query: 14 QVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRG 73 Q+QGYLDHLTIERGVAANTLSSYRRDLRRY++HL +RGI DLA+V E DVS+FLVALRRG Sbjct: 7 QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRG 66 Query: 74 DPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEV 133 DPD+G AL GLHRFAAAEGL E DVARAV+PPTPSRRLPKSLT+DEV Sbjct: 67 DPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEV 126 Query: 134 LALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGG 193 L+LLE AGGD +D P YSTGARISEAVGLD+DD+DT ARSVLL GKGG Sbjct: 127 LSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGG 186 Query: 194 KQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAER 253 KQRLVP+GRPAV ALDAYLVRGRPDLARRGRGT AIFLNARGGRLSRQSAWQVLQD+AER Sbjct: 187 KQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAER 246 Query: 254 AGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGA 313 AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVWAGA Sbjct: 247 AGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 306 Query: 314 HPRAQ 318 HPRA+ Sbjct: 307 HPRAR 311 >tr|Q740E3|Q740E3_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 313 Score = 474 bits (1221), Expect = e-132 Identities = 245/308 (79%), Positives = 259/308 (84%) Query: 11 LDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVAL 70 L+ Q+QGYLDHLTIERGVAANTLSSYRRDLRRY +HL RGI DLA+V E DVS+FLVAL Sbjct: 6 LETQLQGYLDHLTIERGVAANTLSSYRRDLRRYTKHLSDRGISDLAKVGEDDVSEFLVAL 65 Query: 71 RRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTL 130 RRGDPD G AL GLHRF AAEGL E DVARAV+PPTP RRLPKSLT+ Sbjct: 66 RRGDPDTGAAALSAVSAARALIAVRGLHRFLAAEGLAELDVARAVRPPTPGRRLPKSLTI 125 Query: 131 DEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHG 190 D+VLALLEAAGG+S AD P YSTGARISEAVGLDVDDVDTQARSVLL G Sbjct: 126 DQVLALLEAAGGESPADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARSVLLRG 185 Query: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDS 250 KGGKQRLVPIGRPAV+ALDAYLVRGR +LARRGRGTPAIFLN RGGRLSRQSAWQVLQD+ Sbjct: 186 KGGKQRLVPIGRPAVAALDAYLVRGRWELARRGRGTPAIFLNVRGGRLSRQSAWQVLQDA 245 Query: 251 AERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVW 310 AERAGI S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYTMVTVH LREVW Sbjct: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVTVHALREVW 305 Query: 311 AGAHPRAQ 318 A AHPRA+ Sbjct: 306 AEAHPRAR 313 >tr|A0PPB0|A0PPB0_MYCUA Tax_Id=362242 (xerD)SubName: Full=Integrase/recombinase, XerD;[Mycobacterium ulcerans] Length = 313 Score = 474 bits (1219), Expect = e-132 Identities = 241/307 (78%), Positives = 259/307 (84%) Query: 11 LDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVAL 70 LD Q+QGYLDHL IERGVAANTLSSYRRDLRRY++HL RGI DLA+V E DVS+FLVAL Sbjct: 6 LDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDLAKVGEDDVSEFLVAL 65 Query: 71 RRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTL 130 RRGDP++GV L GLHRFAAAEGL DVARAV+PPTP RRLPKSLT+ Sbjct: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFAAAEGLAALDVARAVRPPTPGRRLPKSLTI 125 Query: 131 DEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHG 190 DEVLALLE AGGD+ AD P YSTG+RISEAVGLDVDD+DTQAR+VLL G Sbjct: 126 DEVLALLEGAGGDNPADGPLTLRNRALLELLYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 Query: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDS 250 KGGKQRLVP+GRPAV ALDAYLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQVLQD+ Sbjct: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 Query: 251 AERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVW 310 AERA I S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVW Sbjct: 246 AERADITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 Query: 311 AGAHPRA 317 AGAHPRA Sbjct: 306 AGAHPRA 312 >sp|Q49890|XERD_MYCLE Tax_Id=1769 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium leprae] Length = 316 Score = 454 bits (1168), Expect = e-126 Identities = 234/313 (74%), Positives = 257/313 (82%), Gaps = 3/313 (0%) Query: 9 AVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLV 68 A L Q+QGYLD+L IER +AANTLSSYRRDL RY++HL RGI+DLA+V E DVS+FLV Sbjct: 4 AALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLV 63 Query: 69 ALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSL 128 ALRRGDPD+GV AL GLHRFA AEGL + DVARAV+PPTP RRLPKSL Sbjct: 64 ALRRGDPDSGVAALSAVSAARALIAVRGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSL 123 Query: 129 TLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLL 188 T+DEVLALLE+ GG+S AD P YSTG+RISEAVGLDVDDVDTQAR+VLL Sbjct: 124 TVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQARTVLL 183 Query: 189 HGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQSAWQ 245 GKGGKQRLVP+GRPAV ALDAYLVRGR DLARRG G TPAIFLNARGGRLSRQSAWQ Sbjct: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQ 243 Query: 246 VLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHT 305 VLQD+AE AGI S VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VTV Sbjct: 244 VLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQA 303 Query: 306 LREVWAGAHPRAQ 318 LREVWAGAHPRA+ Sbjct: 304 LREVWAGAHPRAK 316 >tr|B8ZRH7|B8ZRH7_MYCLB Tax_Id=561304 SubName: Full=Integrase/recombinase;[Mycobacterium leprae] Length = 316 Score = 454 bits (1168), Expect = e-126 Identities = 234/313 (74%), Positives = 257/313 (82%), Gaps = 3/313 (0%) Query: 9 AVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLV 68 A L Q+QGYLD+L IER +AANTLSSYRRDL RY++HL RGI+DLA+V E DVS+FLV Sbjct: 4 AALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSEFLV 63 Query: 69 ALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSL 128 ALRRGDPD+GV AL GLHRFA AEGL + DVARAV+PPTP RRLPKSL Sbjct: 64 ALRRGDPDSGVAALSAVSAARALIAVRGLHRFAVAEGLVDLDVARAVRPPTPGRRLPKSL 123 Query: 129 TLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLL 188 T+DEVLALLE+ GG+S AD P YSTG+RISEAVGLDVDDVDTQAR+VLL Sbjct: 124 TVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQARTVLL 183 Query: 189 HGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRG---TPAIFLNARGGRLSRQSAWQ 245 GKGGKQRLVP+GRPAV ALDAYLVRGR DLARRG G TPAIFLNARGGRLSRQSAWQ Sbjct: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQ 243 Query: 246 VLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHT 305 VLQD+AE AGI S VSPH LRHSFATHLL+GGAD+RVVQEL+GHASVTTTQIYT+VTV Sbjct: 244 VLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVTVQA 303 Query: 306 LREVWAGAHPRAQ 318 LREVWAGAHPRA+ Sbjct: 304 LREVWAGAHPRAK 316 >tr|B1MB26|B1MB26_MYCA9 Tax_Id=561007 SubName: Full=Tyrosine recombinase XerD;[Mycobacterium abscessus] Length = 315 Score = 436 bits (1121), Expect = e-120 Identities = 230/315 (73%), Positives = 252/315 (80%), Gaps = 2/315 (0%) Query: 5 SALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVS 64 +A +LD ++Q YLDHL +ERGVAANTLSSYRRDLRRY +HL R ID LA V E+DVS Sbjct: 2 TAAVGLLDGEIQSYLDHLDVERGVAANTLSSYRRDLRRYQQHLADRKIDRLAEVCETDVS 61 Query: 65 DFLVALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRL 124 DF+V LRRGDP GV L GLHRFAA EGL DVARAVKPPTP+RRL Sbjct: 62 DFVVTLRRGDPANGVPELSASSAARALIAVRGLHRFAAIEGLAPTDVARAVKPPTPNRRL 121 Query: 125 PKSLTLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQAR 184 PKSLT+++V ALL AAGG +D P YSTGARISEAVGLDVDDVD QAR Sbjct: 122 PKSLTVEQVEALLNAAGGGG-SDGPLDLRNRALLELLYSTGARISEAVGLDVDDVDVQAR 180 Query: 185 SVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGR-GTPAIFLNARGGRLSRQSA 243 SVLL GKGGKQRLVP+GRPAV AL AYLVRGRPDLARRGR G PA+FLN+RGGRLSRQSA Sbjct: 181 SVLLWGKGGKQRLVPVGRPAVEALQAYLVRGRPDLARRGRGGVPALFLNSRGGRLSRQSA 240 Query: 244 WQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTV 303 WQVL D+AERA I++AVSPHTLRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTV Sbjct: 241 WQVLADAAERAKISAAVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTV 300 Query: 304 HTLREVWAGAHPRAQ 318 LREVWAGAHPRA+ Sbjct: 301 SALREVWAGAHPRAR 315 >tr|D5PL16|D5PL16_COREQ Tax_Id=525370 (xerD)SubName: Full=Tyrosine recombinase XerD;[Rhodococcus equi ATCC 33707] Length = 309 Score = 419 bits (1077), Expect = e-115 Identities = 215/304 (70%), Positives = 242/304 (79%), Gaps = 2/304 (0%) Query: 15 VQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRGD 74 + YLDHL +ERG A NTL+SYRRDL RYA L RG DD+ V E+DVS+F+VALR+GD Sbjct: 8 IDSYLDHLAVERGAARNTLTSYRRDLDRYARFLEARGTDDVRSVTETDVSEFVVALRKGD 67 Query: 75 PDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEVL 134 P GV AL GLHRFAAAEG+T DVARAVKPPTP RRLPKSL LD+VL Sbjct: 68 PAEGVVALAPSSAARALIAVRGLHRFAAAEGVTSGDVARAVKPPTPGRRLPKSLPLDDVL 127 Query: 135 ALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGGK 194 A+LEA+GGD AD+P YSTGARISEAVGLDVDD+DTQ+RSVLL GKGGK Sbjct: 128 AILEASGGDGSADNPRTLRDRALLELLYSTGARISEAVGLDVDDLDTQSRSVLLRGKGGK 187 Query: 195 QRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAERA 254 +R+VP+GRPA++A+D YLVRGRP L+ RG PA+FLN RGGRLSRQSAWQVL +AE+A Sbjct: 188 ERVVPVGRPAITAIDNYLVRGRPALS--VRGGPALFLNVRGGRLSRQSAWQVLHTAAEKA 245 Query: 255 GIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGAH 314 GIA AVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYT+VTV LREVWA AH Sbjct: 246 GIAVAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVGALREVWAQAH 305 Query: 315 PRAQ 318 PRA+ Sbjct: 306 PRAR 309 >tr|Q0SI76|Q0SI76_RHOSR Tax_Id=101510 SubName: Full=Tyrosine recombinase;[Rhodococcus sp.] Length = 308 Score = 410 bits (1053), Expect = e-112 Identities = 210/309 (67%), Positives = 239/309 (77%), Gaps = 2/309 (0%) Query: 10 VLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVA 69 V+ QV YLDHL +ERG A NTL SYRRDL RY + L R + D+ R+ E DVSDF++A Sbjct: 2 VIARQVDSYLDHLAVERGAARNTLGSYRRDLERYTQFLADRELTDIDRIREQDVSDFVIA 61 Query: 70 LRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLT 129 LR GDP+ + L G HRFAAAEG+T DVAR V+PP+P++RLPKSL Sbjct: 62 LRSGDPNRELPPLAASSAARALIAVRGFHRFAAAEGMTAVDVARDVRPPSPAKRLPKSLP 121 Query: 130 LDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLH 189 ++EVLALLEA GG AD P YSTGARISEAVGLDVDDVDT+ RSVLL Sbjct: 122 VNEVLALLEAVGGSGPADGPRAVRDRALLELLYSTGARISEAVGLDVDDVDTETRSVLLR 181 Query: 190 GKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQD 249 GKGGKQR+VP+GRPAV +LDAYL+RGRP LA RGTPA+FLN RGGRLSRQSAW+VLQ Sbjct: 182 GKGGKQRVVPVGRPAVESLDAYLIRGRPALA--SRGTPALFLNVRGGRLSRQSAWKVLQA 239 Query: 250 SAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREV 309 +A+ AGI+SAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYT+VTV LREV Sbjct: 240 AADAAGISSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVGALREV 299 Query: 310 WAGAHPRAQ 318 WAGAHPRA+ Sbjct: 300 WAGAHPRAR 308 >tr|C3JWI6|C3JWI6_RHOER Tax_Id=596309 (xerD)SubName: Full=Tyrosine recombinase XerD;[Rhodococcus erythropolis SK121] Length = 307 Score = 405 bits (1042), Expect = e-111 Identities = 206/309 (66%), Positives = 239/309 (77%), Gaps = 2/309 (0%) Query: 10 VLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVA 69 +L QV YLDHL +ERG A NTL SYRRDL RYAE+L RGIDD+A V E+DV++F+ Sbjct: 1 MLARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLNGRGIDDVAGVTENDVTEFVTH 60 Query: 70 LRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLT 129 LR GD DAGV L G H+F+AAEGL DVAR VKPPTP R+LPK+L Sbjct: 61 LRLGDKDAGVVPLAASSAARTLIAVRGFHKFSAAEGLVSVDVARTVKPPTPGRKLPKALP 120 Query: 130 LDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLH 189 LD+V+ALL+A+GG + D P YSTGARI+EA+ LDVDD+DT+ RSVLL Sbjct: 121 LDDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLK 180 Query: 190 GKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQD 249 GKGGKQR+VP+GRPA++A+DAYLVRGRP LA RG PA+FLNARGGRLSRQSAWQ+LQD Sbjct: 181 GKGGKQRIVPVGRPAIAAVDAYLVRGRPSLAT--RGVPALFLNARGGRLSRQSAWQILQD 238 Query: 250 SAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREV 309 +A AGI + VSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYT+VTV +REV Sbjct: 239 AAASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTAMREV 298 Query: 310 WAGAHPRAQ 318 WA AHPRA+ Sbjct: 299 WAQAHPRAR 307 >tr|C1A033|C1A033_RHOE4 Tax_Id=234621 (xerD)SubName: Full=Tyrosine recombinase XerD;[Rhodococcus erythropolis] Length = 307 Score = 404 bits (1039), Expect = e-111 Identities = 207/309 (66%), Positives = 239/309 (77%), Gaps = 2/309 (0%) Query: 10 VLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVA 69 +L QV YLDHL +ERG A NTL SYRRDL RYAE+L RGIDD+A V E+DV++F+ Sbjct: 1 MLARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLDGRGIDDVAGVTENDVTEFVTH 60 Query: 70 LRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLT 129 LR GD DAGV L G H+F+AAEGL DVAR VKPPTP R+LPK+L Sbjct: 61 LRLGDKDAGVLPLAASSAARTLIAVRGFHKFSAAEGLVGVDVARTVKPPTPGRKLPKALP 120 Query: 130 LDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLH 189 LD+V+ALL+A+GG + D P YSTGARI+EA+ LDVDD+DT+ RSVLL Sbjct: 121 LDDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLK 180 Query: 190 GKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQD 249 GKGGKQR+VP+GRPA++A+DAYLVRGRP LA RG PA+FLNARGGRLSRQSAWQ+LQD Sbjct: 181 GKGGKQRIVPVGRPAIAAVDAYLVRGRPSLAT--RGVPALFLNARGGRLSRQSAWQILQD 238 Query: 250 SAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREV 309 +A AGI + VSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYT+VTV LREV Sbjct: 239 AAASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTALREV 298 Query: 310 WAGAHPRAQ 318 WA AHPRA+ Sbjct: 299 WAQAHPRAR 307 >tr|D5UQZ2|D5UQZ2_TSUPA Tax_Id=521096 SubName: Full=Tyrosine recombinase XerD;[Tsukamurella paurometabola DSM 20162] Length = 324 Score = 387 bits (994), Expect = e-105 Identities = 206/320 (64%), Positives = 240/320 (75%), Gaps = 7/320 (2%) Query: 1 MTGTSALRAVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAE 60 +T + LDE ++ YLDHLT+ERG AANTLSSYRRDL RY E+L + GIDDLA V Sbjct: 7 VTTGGTVNTPLDEALRAYLDHLTVERGAAANTLSSYRRDLDRYREYLVELGIDDLASVTS 66 Query: 61 SDVSDFLVALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTP 120 + VS FLVALR G G L GLHRFAAAEGLT +DVAR V+PP P Sbjct: 67 TQVSGFLVALREGSD--GRPPLAASSAARSLIAVRGLHRFAAAEGLTASDVAREVRPPAP 124 Query: 121 SRRLPKSLTLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVD 180 ++RLPK+L++D V+ALLEAAGGD E+D+P YS GARISE LDVDD+D Sbjct: 125 AKRLPKALSIDTVIALLEAAGGDGESDTPSRLRDRALLELLYSCGARISEVTALDVDDID 184 Query: 181 TQARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSR 240 Q+RSV+L GKGGKQR+VPIGRPA++A++AYLVRGRP L + + PA+FLN RGGRLSR Sbjct: 185 VQSRSVVLMGKGGKQRVVPIGRPALAAIEAYLVRGRPSLVK--KSNPALFLNVRGGRLSR 242 Query: 241 QSAWQVLQDSAERAGI---ASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQI 297 QSAWQVL +AERAGI A VSPHTLRHSFATHLL+GGADVRVVQELLGHASVTTTQ+ Sbjct: 243 QSAWQVLATAAERAGIDTDAVHVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQV 302 Query: 298 YTMVTVHTLREVWAGAHPRA 317 YT+VTV LREV+A AHPRA Sbjct: 303 YTLVTVQALREVYAQAHPRA 322 >tr|Q5YY88|Q5YY88_NOCFA Tax_Id=37329 (xerD)SubName: Full=Putative recombinase;[Nocardia farcinica] Length = 316 Score = 383 bits (983), Expect = e-104 Identities = 207/318 (65%), Positives = 233/318 (73%), Gaps = 11/318 (3%) Query: 10 VLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVA 69 +L ++ YLDHL +ERG A NTL +YRRDL RY + L +RGI L +V E+DV+ F VA Sbjct: 1 MLAREIDAYLDHLAVERGAARNTLGAYRRDLGRYRDFLTERGIGGLEQVREADVAAFTVA 60 Query: 70 LRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLT 129 LR G D L GLHRFAAAEG+T DVA AVKPPTP RRLPK+L Sbjct: 61 LRSGGGDH--PPLAASSVARALIAVRGLHRFAAAEGMTSTDVAHAVKPPTPGRRLPKALP 118 Query: 130 LDEVLALLEAAGGDSEADS--------PXXXXXXXXXXXXYSTGARISEAVGLDVDDVDT 181 D+VL LLEAAGG D P YSTGARISE VGLDVDD+DT Sbjct: 119 YDQVLRLLEAAGGGPAEDGDTAAADGGPRGLRDRALLELLYSTGARISEMVGLDVDDLDT 178 Query: 182 QARSVLLHGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTP-AIFLNARGGRLSR 240 R+V+L GKGGKQR+VPIGRPA++A+DAYLVRGRP LA G+GT A+FLN RGGRLSR Sbjct: 179 TERAVVLRGKGGKQRIVPIGRPALAAVDAYLVRGRPVLAAAGKGTGGALFLNVRGGRLSR 238 Query: 241 QSAWQVLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTM 300 QSAWQVLQ +AERAGI +AVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYT+ Sbjct: 239 QSAWQVLQTAAERAGIGAAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTL 298 Query: 301 VTVHTLREVWAGAHPRAQ 318 VTV TLREVWA AHPRA+ Sbjct: 299 VTVSTLREVWATAHPRAR 316 >tr|D0L944|D0L944_GORB4 Tax_Id=526226 SubName: Full=Tyrosine recombinase XerD;[Gordonia bronchialis] Length = 313 Score = 366 bits (940), Expect = 2e-99 Identities = 195/304 (64%), Positives = 222/304 (73%), Gaps = 5/304 (1%) Query: 15 VQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRGD 74 V YLDHLT+ERG A NT++SYRRDL RY +L RGI LA V ESD+ +FLVALRRGD Sbjct: 15 VARYLDHLTVERGAAHNTVTSYRRDLERYQNYLIARGISGLAEVTESDIREFLVALRRGD 74 Query: 75 PDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEVL 134 G L H FA EG+ DVA AV+PP P+RRLPKSL +DEVL Sbjct: 75 EATGSRPLADSSIARTLVATRRFHGFAVDEGVVSTDVAHAVRPPRPARRLPKSLPVDEVL 134 Query: 135 ALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGGK 194 A+LEA+ S D P YS GARISEA LDVDD+DT AR+V L GKGGK Sbjct: 135 AILEAS---STGDHPRALRDRALLELLYSCGARISEATSLDVDDLDTAARAVRLRGKGGK 191 Query: 195 QRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAERA 254 +R+VP+G PA A+DAYLVRGRP LA R PA+FLNARGGRLSRQSAWQVL +AERA Sbjct: 192 ERIVPVGGPAADAIDAYLVRGRPVLATRS--APALFLNARGGRLSRQSAWQVLVSAAERA 249 Query: 255 GIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGAH 314 G+ AVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQ+YT+VTV+T+REV+A AH Sbjct: 250 GLDKAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVNTMREVYATAH 309 Query: 315 PRAQ 318 PRA+ Sbjct: 310 PRAR 313 >tr|D2Q3L1|D2Q3L1_KRIFD Tax_Id=479435 SubName: Full=Tyrosine recombinase XerD;[Kribbella flavida] Length = 313 Score = 350 bits (897), Expect = 2e-94 Identities = 187/303 (61%), Positives = 215/303 (70%), Gaps = 2/303 (0%) Query: 15 VQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRGD 74 V YLDHLT+ERG+AANTL+SYRRDLRRY E+L GI L RV E+ V DFL+ LR GD Sbjct: 8 VSAYLDHLTVERGLAANTLASYRRDLRRYDEYLAGAGISALGRVTEAVVGDFLMRLREGD 67 Query: 75 PDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEVL 134 L G H+F EGLT D A AVKPP P +RLPK+L++DEV Sbjct: 68 EHH--PPLTASSAGRTVVAVRGFHKFCLREGLTVIDPAAAVKPPVPPQRLPKALSVDEVT 125 Query: 135 ALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGGK 194 +L AA G + Y TGARISEAVGLDVDDVD ++ VLL GKG K Sbjct: 126 RILAAAAGADAEPAVLATRDAALLEFLYGTGARISEAVGLDVDDVDLESGQVLLRGKGSK 185 Query: 195 QRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAERA 254 +R+VP+G A AL AY VRGRPDL RGRGT A+FLNARGGRLSRQSAW VL+ +A+RA Sbjct: 186 ERVVPVGSYAREALSAYQVRGRPDLVARGRGTHALFLNARGGRLSRQSAWTVLRRAAQRA 245 Query: 255 GIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGAH 314 GI+ +SPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQ+YT+VTV LREV+A +H Sbjct: 246 GISKEISPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDKLREVYATSH 305 Query: 315 PRA 317 PRA Sbjct: 306 PRA 308 >tr|C7MZG5|C7MZG5_SACVD Tax_Id=471857 SubName: Full=Tyrosine recombinase XerD subunit;[Saccharomonospora viridis] Length = 311 Score = 349 bits (895), Expect = 3e-94 Identities = 186/303 (61%), Positives = 215/303 (70%), Gaps = 6/303 (1%) Query: 15 VQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRRGD 74 V Y+DHLT+ERG A NT+ Y RDLRRY HL G+ DL +VA V F +LR G+ Sbjct: 13 VAAYVDHLTVERGTARNTVDGYARDLRRYLAHLADAGVTDLRQVARDHVVGFAASLRHGE 72 Query: 75 PDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDEVL 134 D L GLHRFA AEG TE D AR V+PP +RRLPK+L + +VL Sbjct: 73 GDR--PPLAPSSAARALSAVRGLHRFAHAEGWTEEDPARDVRPPPLTRRLPKALPVADVL 130 Query: 135 ALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKGGK 194 LL GD YSTGARISEA GLDVDDVD R+V+L GKGG+ Sbjct: 131 RLLNTPTGDDARS----LRDRALLELLYSTGARISEATGLDVDDVDRAERTVVLDGKGGR 186 Query: 195 QRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAERA 254 QRLVP+GRPA+ ALDAYL+R RP LA +GRGT A+FLNARGGRLSRQ AWQVL+ +AERA Sbjct: 187 QRLVPVGRPALEALDAYLIRARPALAAKGRGTGAVFLNARGGRLSRQGAWQVLKVAAERA 246 Query: 255 GIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAGAH 314 GI++ VSPHTLRHSFATHLL+GGADVRVVQELLGHASVTTTQ+YT+VTV+TLREV+A H Sbjct: 247 GISTPVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTVNTLREVYATTH 306 Query: 315 PRA 317 PRA Sbjct: 307 PRA 309 >tr|A4FKA7|A4FKA7_SACEN Tax_Id=405948 (xerD)SubName: Full=Integrase/recombinase;[Saccharopolyspora erythraea] Length = 313 Score = 347 bits (889), Expect = 2e-93 Identities = 182/308 (59%), Positives = 220/308 (71%), Gaps = 6/308 (1%) Query: 11 LDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVAL 70 L GYL+HL +ERG A +TL SY RDLRRYA+HL + G+ L V + +S FL L Sbjct: 11 LSSVFSGYLNHLAVERGTARSTLDSYARDLRRYADHLLESGVRALGEVRSTHLSAFLAEL 70 Query: 71 RRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTL 130 R G P+ AL GLHRFA A+G+ E DVAR + PP+P +RLPK+L + Sbjct: 71 REGGPER--PALAQSSAARALIAARGLHRFAHADGIVEVDVAREISPPSPPKRLPKALPV 128 Query: 131 DEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHG 190 +VL LL+ GG+ YS+GARISEAVGLDVDDVD R++LL G Sbjct: 129 SDVLRLLDNTGGEDVRG----LRDRALLELLYSSGARISEAVGLDVDDVDEAERTILLDG 184 Query: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDS 250 KGG+QRLVP+GRPA++AL AY+VR RP LA RGRG+ A+FLN+RG RLSRQSAW L+ + Sbjct: 185 KGGRQRLVPVGRPALAALGAYMVRARPVLAGRGRGSSAVFLNSRGTRLSRQSAWNALKSA 244 Query: 251 AERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVW 310 AERAGI S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQ+YT++TV+TLREV Sbjct: 245 AERAGIGSGVSPHVLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLITVNTLREVH 304 Query: 311 AGAHPRAQ 318 A AHPRA+ Sbjct: 305 ATAHPRAR 312 >tr|D2S8M3|D2S8M3_GEOOG Tax_Id=526225 SubName: Full=Tyrosine recombinase XerD;[Geodermatophilus obscurus] Length = 315 Score = 345 bits (884), Expect = 6e-93 Identities = 186/312 (59%), Positives = 222/312 (71%), Gaps = 8/312 (2%) Query: 9 AVLDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLV 68 + +D V GYLDHLT+ERG+AANT+SSYRRDLRRY E L G+ L VAESDV+ FL Sbjct: 7 SAVDRVVTGYLDHLTVERGLAANTISSYRRDLRRYTEFLDAAGVRGLGEVAESDVAGFLA 66 Query: 69 ALRRGDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSL 128 ALR+GD D L GLHRFA +GL +DVA V+PP+P+RRLPK++ Sbjct: 67 ALRQGDDDH--PPLSATSAARAVVAVRGLHRFALLDGLVPDDVAHEVRPPSPARRLPKAI 124 Query: 129 TLDEVLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLL 188 ++ V+AL+EAAG + P Y TGARISEAVGL VDD+D V L Sbjct: 125 PVESVVALIEAAGA---LEGPRGLRDRALLELLYGTGARISEAVGLAVDDLDRGQSVVRL 181 Query: 189 HGKGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTP---AIFLNARGGRLSRQSAWQ 245 GKGGKQR+VP+G A+ A++ YLVR RP LA GRG A+FLNARGG LSRQSAW Sbjct: 182 AGKGGKQRIVPVGSYALRAVEDYLVRARPALAAAGRGGVRGGALFLNARGGSLSRQSAWA 241 Query: 246 VLQDSAERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHT 305 +L+ +AERAG+ + VSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQ+YT+VTV Sbjct: 242 ILRTAAERAGLTAEVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDR 301 Query: 306 LREVWAGAHPRA 317 LREV+A +HPRA Sbjct: 302 LREVYASSHPRA 313 >tr|C6WA61|C6WA61_ACTMD Tax_Id=446462 SubName: Full=Tyrosine recombinase XerD;[Actinosynnema mirum] Length = 299 Score = 338 bits (867), Expect = 5e-91 Identities = 187/305 (61%), Positives = 215/305 (70%), Gaps = 15/305 (4%) Query: 13 EQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVALRR 72 + V YLDHL +ERG A NTL SY RDLRRY HL G+ L V E+ V DFL LR Sbjct: 8 DAVTAYLDHLAVERGAARNTLDSYARDLRRYLAHLESAGLG-LDAVTEAVVGDFLAGLRE 66 Query: 73 GDPDAGVTALXXXXXXXXXXXXXGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTLDE 132 A A GLHRFA EGLT D A+ V+PP RRLPK+L + + Sbjct: 67 SGLAASSAA-------RTLVAVRGLHRFAHREGLTAADPAKDVQPPAAPRRLPKALPVAD 119 Query: 133 VLALLEAAGGDSEADSPXXXXXXXXXXXXYSTGARISEAVGLDVDDVDTQARSVLLHGKG 192 VL LL+ AG D+P YSTGARISE VGLDVDDVD R+ LL GKG Sbjct: 120 VLRLLDTAG-----DTPAALRDRALLELLYSTGARISEVVGLDVDDVDAAERTALLDGKG 174 Query: 193 GKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDSAE 252 GKQR+VP+GRPA++A++AYLVR RP LA+RG PA+FLNARGGRLSRQSAWQVL+ +AE Sbjct: 175 GKQRVVPVGRPALAAVEAYLVRARPVLAKRGG--PALFLNARGGRLSRQSAWQVLKTAAE 232 Query: 253 RAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVWAG 312 RAG+A+ VSPHTLRHSFATHLL+ GADVRVVQELLGHASVTTTQ+YT+VTV TLREV+A Sbjct: 233 RAGVAAEVSPHTLRHSFATHLLEAGADVRVVQELLGHASVTTTQVYTLVTVTTLREVYAT 292 Query: 313 AHPRA 317 AHPRA Sbjct: 293 AHPRA 297 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.318 0.133 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,316,604,103 Number of extensions: 88508659 Number of successful extensions: 264851 Number of sequences better than 10.0: 12326 Number of HSP's gapped: 254116 Number of HSP's successfully gapped: 12522 Length of query: 318 Length of database: 4,236,830,644 Length adjustment: 138 Effective length of query: 180 Effective length of database: 2,510,745,412 Effective search space: 451934174160 Effective search space used: 451934174160 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 80 (35.4 bits)