BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3792 (64 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0QYU7|RL35_MYCS2 Tax_Id=246196 (rpmI)RecName: Full=50S ribos... 130 5e-29 sp|Q740J7|RL35_MYCPA Tax_Id=1770 (rpmI)RecName: Full=50S ribosom... 116 8e-25 sp|A0QHC2|RL35_MYCA1 Tax_Id=243243 (rpmI)RecName: Full=50S ribos... 116 8e-25 sp|Q1B7P7|RL35_MYCSS Tax_Id=164756 (rpmI)RecName: Full=50S ribos... 116 1e-24 sp|A1UHB0|RL35_MYCSK Tax_Id=189918 (rpmI)RecName: Full=50S ribos... 116 1e-24 sp|A3Q0U7|RL35_MYCSJ Tax_Id=164757 (rpmI)RecName: Full=50S ribos... 116 1e-24 sp|A0PP59|RL35_MYCUA Tax_Id=362242 (rpmI)RecName: Full=50S ribos... 114 5e-24 sp|B2HR13|RL35_MYCMM Tax_Id=216594 (rpmI)RecName: Full=50S ribos... 114 5e-24 sp|A1TAC4|RL35_MYCVP Tax_Id=350058 (rpmI)RecName: Full=50S ribos... 113 9e-24 tr|D5P309|D5P309_9MYCO Tax_Id=525368 (rpmI)SubName: Full=50S rib... 113 9e-24 sp|P66271|RL35_MYCTU Tax_Id=1773 (rpmI)RecName: Full=50S ribosom... 112 1e-23 sp|A5U2Z9|RL35_MYCTA Tax_Id=419947 (rpmI)RecName: Full=50S ribos... 112 1e-23 sp|C1ANR5|RL35_MYCBT Tax_Id=561275 (rpmI)RecName: Full=50S ribos... 112 1e-23 sp|A1KJ59|RL35_MYCBP Tax_Id=410289 (rpmI)RecName: Full=50S ribos... 112 1e-23 sp|P66272|RL35_MYCBO Tax_Id=1765 (rpmI)RecName: Full=50S ribosom... 112 1e-23 tr|C6DS29|C6DS29_MYCTK Tax_Id=478434 (rpmI)RecName: Full=50S rib... 112 1e-23 tr|A5WMW3|A5WMW3_MYCTF Tax_Id=336982 (rpmI)RecName: Full=50S rib... 112 1e-23 tr|D6G834|D6G834_MYCTU Tax_Id=478435 SubName: Full=50S ribosomal... 112 1e-23 tr|D6FTG5|D6FTG5_MYCTU Tax_Id=611304 SubName: Full=50S ribosomal... 112 1e-23 tr|D6FHR6|D6FHR6_MYCTU Tax_Id=611303 SubName: Full=50S ribosomal... 112 1e-23 tr|D6F470|D6F470_MYCTU Tax_Id=611302 SubName: Full=LSU ribosomal... 112 1e-23 tr|D5ZHD4|D5ZHD4_MYCTU Tax_Id=537210 SubName: Full=50S ribosomal... 112 1e-23 tr|D5Z4C4|D5Z4C4_MYCTU Tax_Id=537209 SubName: Full=50S ribosomal... 112 1e-23 tr|D5YTA4|D5YTA4_MYCTU Tax_Id=515616 SubName: Full=50S ribosomal... 112 1e-23 tr|D5YFF1|D5YFF1_MYCTU Tax_Id=520140 SubName: Full=50S ribosomal... 112 1e-23 tr|D5Y3T8|D5Y3T8_MYCTU Tax_Id=520141 SubName: Full=50S ribosomal... 112 1e-23 tr|D5XTR6|D5XTR6_MYCTU Tax_Id=515617 SubName: Full=50S ribosomal... 112 1e-23 tr|A4KHG5|A4KHG5_MYCTU Tax_Id=395095 (rpmI)RecName: Full=50S rib... 112 1e-23 tr|A2VID1|A2VID1_MYCTU Tax_Id=348776 (rpmI)RecName: Full=50S rib... 112 1e-23 sp|Q9CC21|RL35_MYCLE Tax_Id=1769 (rpmI)RecName: Full=50S ribosom... 112 1e-23 sp|B8ZRJ6|RL35_MYCLB Tax_Id=561304 (rpmI)RecName: Full=50S ribos... 112 1e-23 sp|A4T9V0|RL35_MYCGI Tax_Id=350054 (rpmI)RecName: Full=50S ribos... 110 6e-23 sp|B1MAY2|RL35_MYCA9 Tax_Id=561007 (rpmI)RecName: Full=50S ribos... 105 2e-21 tr|D0L970|D0L970_GORB4 Tax_Id=526226 (rpmI)RecName: Full=50S rib... 94 4e-18 sp|Q5YYI0|RL35_NOCFA Tax_Id=37329 (rpmI)RecName: Full=50S riboso... 92 2e-17 tr|D1AEY1|D1AEY1_THECD Tax_Id=471852 SubName: Full=Ribosomal pro... 91 6e-17 sp|Q0SI46|RL35_RHOSR Tax_Id=101510 (rpmI)RecName: Full=50S ribos... 89 2e-16 sp|C1AT08|RL35_RHOOB Tax_Id=632772 (rpmI)RecName: Full=50S ribos... 89 2e-16 sp|Q0RF99|RL35_FRAAA Tax_Id=326424 (rpmI)RecName: Full=50S ribos... 89 2e-16 tr|D3M4P0|D3M4P0_9ACTO Tax_Id=656024 (rpmI)RecName: Full=50S rib... 88 4e-16 sp|Q2J854|RL35_FRASC Tax_Id=106370 (rpmI)RecName: Full=50S ribos... 87 5e-16 tr|D5UDW5|D5UDW5_9CELL Tax_Id=446466 SubName: Full=Ribosomal pro... 87 5e-16 sp|A0LUD0|RL35_ACIC1 Tax_Id=351607 (rpmI)RecName: Full=50S ribos... 87 7e-16 tr|D1BII0|D1BII0_SANKS Tax_Id=446469 (rpmI)RecName: Full=50S rib... 86 1e-15 tr|D1XMS3|D1XMS3_9ACTO Tax_Id=647653 (rpmI)RecName: Full=50S rib... 86 2e-15 >sp|A0QYU7|RL35_MYCS2 Tax_Id=246196 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium smegmatis] Length = 64 Score = 130 bits (327), Expect = 5e-29 Identities = 64/64 (100%), Positives = 64/64 (100%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|Q740J7|RL35_MYCPA Tax_Id=1770 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium paratuberculosis] Length = 64 Score = 116 bits (291), Expect = 8e-25 Identities = 56/64 (87%), Positives = 58/64 (90%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQK NRRHLLEHKPT RTRRL+GRTTVSA D R+N Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKTNRRHLLEHKPTTRTRRLEGRTTVSANDTKRVNS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|A0QHC2|RL35_MYCA1 Tax_Id=243243 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium avium] Length = 64 Score = 116 bits (291), Expect = 8e-25 Identities = 56/64 (87%), Positives = 58/64 (90%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQK NRRHLLEHKPT RTRRL+GRTTVSA D R+N Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKTNRRHLLEHKPTTRTRRLEGRTTVSANDTKRVNS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|Q1B7P7|RL35_MYCSS Tax_Id=164756 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium sp.] Length = 64 Score = 116 bits (290), Expect = 1e-24 Identities = 57/64 (89%), Positives = 59/64 (92%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHL+EHKPTKRTRRL GRT VSA D RINK Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLMEHKPTKRTRRLAGRTQVSANDAPRINK 60 Query: 61 LLNG 64 +LNG Sbjct: 61 MLNG 64 >sp|A1UHB0|RL35_MYCSK Tax_Id=189918 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium sp.] Length = 64 Score = 116 bits (290), Expect = 1e-24 Identities = 57/64 (89%), Positives = 59/64 (92%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHL+EHKPTKRTRRL GRT VSA D RINK Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLMEHKPTKRTRRLAGRTQVSANDAPRINK 60 Query: 61 LLNG 64 +LNG Sbjct: 61 MLNG 64 >sp|A3Q0U7|RL35_MYCSJ Tax_Id=164757 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium sp.] Length = 64 Score = 116 bits (290), Expect = 1e-24 Identities = 57/64 (89%), Positives = 59/64 (92%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHL+EHKPTKRTRRL GRT VSA D RINK Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLMEHKPTKRTRRLAGRTQVSANDAPRINK 60 Query: 61 LLNG 64 +LNG Sbjct: 61 MLNG 64 >sp|A0PP59|RL35_MYCUA Tax_Id=362242 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium ulcerans] Length = 64 Score = 114 bits (284), Expect = 5e-24 Identities = 55/64 (85%), Positives = 58/64 (90%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHK +KRTRRLDGRTTV+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKSSKRTRRLDGRTTVAANDTKRVKS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|B2HR13|RL35_MYCMM Tax_Id=216594 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium marinum] Length = 64 Score = 114 bits (284), Expect = 5e-24 Identities = 55/64 (85%), Positives = 58/64 (90%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHK +KRTRRLDGRTTV+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKSSKRTRRLDGRTTVAANDTKRVKS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|A1TAC4|RL35_MYCVP Tax_Id=350058 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium vanbaalenii] Length = 64 Score = 113 bits (282), Expect = 9e-24 Identities = 54/64 (84%), Positives = 58/64 (90%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFR TG+GK+VRQKANRRHLLEHKPTKRTRRLDGRT V+A D R+ K Sbjct: 1 MPKAKTHSGASKRFRTTGSGKVVRQKANRRHLLEHKPTKRTRRLDGRTVVAANDVKRVKK 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D5P309|D5P309_9MYCO Tax_Id=525368 (rpmI)SubName: Full=50S ribosomal protein L35;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 64 Score = 113 bits (282), Expect = 9e-24 Identities = 55/64 (85%), Positives = 58/64 (90%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHK + RTRRL+GRTTVSA D R+N Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKSSTRTRRLEGRTTVSANDTKRVNA 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|P66271|RL35_MYCTU Tax_Id=1773 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|A5U2Z9|RL35_MYCTA Tax_Id=419947 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|C1ANR5|RL35_MYCBT Tax_Id=561275 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium bovis] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|A1KJ59|RL35_MYCBP Tax_Id=410289 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium bovis] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|P66272|RL35_MYCBO Tax_Id=1765 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium bovis] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|C6DS29|C6DS29_MYCTK Tax_Id=478434 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|A5WMW3|A5WMW3_MYCTF Tax_Id=336982 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D6G834|D6G834_MYCTU Tax_Id=478435 SubName: Full=50S ribosomal protein L35 rpmI;[Mycobacterium tuberculosis KZN 605] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D6FTG5|D6FTG5_MYCTU Tax_Id=611304 SubName: Full=50S ribosomal protein L35 rpmI;[Mycobacterium tuberculosis K85] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D6FHR6|D6FHR6_MYCTU Tax_Id=611303 SubName: Full=50S ribosomal protein L35 rpmI;[Mycobacterium tuberculosis CPHL_A] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D6F470|D6F470_MYCTU Tax_Id=611302 SubName: Full=LSU ribosomal protein L35;[Mycobacterium tuberculosis T46] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D5ZHD4|D5ZHD4_MYCTU Tax_Id=537210 SubName: Full=50S ribosomal protein L35 rpmI;[Mycobacterium tuberculosis T17] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D5Z4C4|D5Z4C4_MYCTU Tax_Id=537209 SubName: Full=50S ribosomal protein L35 rpmI;[Mycobacterium tuberculosis GM 1503] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D5YTA4|D5YTA4_MYCTU Tax_Id=515616 SubName: Full=50S ribosomal protein L35 rpmI;[Mycobacterium tuberculosis 02_1987] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D5YFF1|D5YFF1_MYCTU Tax_Id=520140 SubName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis EAS054] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D5Y3T8|D5Y3T8_MYCTU Tax_Id=520141 SubName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis T85] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|D5XTR6|D5XTR6_MYCTU Tax_Id=515617 SubName: Full=50S ribosomal protein L35 rpmI;[Mycobacterium tuberculosis T92] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|A4KHG5|A4KHG5_MYCTU Tax_Id=395095 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis str. Haarlem] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >tr|A2VID1|A2VID1_MYCTU Tax_Id=348776 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium tuberculosis C] Length = 64 Score = 112 bits (281), Expect = 1e-23 Identities = 54/64 (84%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKP+ RTRRLDGRT V+A D R+ Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRVTS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|Q9CC21|RL35_MYCLE Tax_Id=1769 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium leprae] Length = 64 Score = 112 bits (280), Expect = 1e-23 Identities = 54/64 (84%), Positives = 56/64 (87%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHL EHKP+ RTRRLDG T VSA D R+N Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLFEHKPSTRTRRLDGHTRVSANDTQRVNS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|B8ZRJ6|RL35_MYCLB Tax_Id=561304 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium leprae] Length = 64 Score = 112 bits (280), Expect = 1e-23 Identities = 54/64 (84%), Positives = 56/64 (87%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHL EHKP+ RTRRLDG T VSA D R+N Sbjct: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLFEHKPSTRTRRLDGHTRVSANDTQRVNS 60 Query: 61 LLNG 64 LLNG Sbjct: 61 LLNG 64 >sp|A4T9V0|RL35_MYCGI Tax_Id=350054 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium gilvum] Length = 64 Score = 110 bits (275), Expect = 6e-23 Identities = 53/64 (82%), Positives = 57/64 (89%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFR+TGTGKIVRQKANRRHLLEHK TKRTRRLDGRT V+ D R+ K Sbjct: 1 MPKAKTHSGASKRFRKTGTGKIVRQKANRRHLLEHKATKRTRRLDGRTVVAPNDVKRVTK 60 Query: 61 LLNG 64 +LNG Sbjct: 61 MLNG 64 >sp|B1MAY2|RL35_MYCA9 Tax_Id=561007 (rpmI)RecName: Full=50S ribosomal protein L35;[Mycobacterium abscessus] Length = 64 Score = 105 bits (261), Expect = 2e-21 Identities = 50/64 (78%), Positives = 54/64 (84%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPKAKTHSGASKRFR TG+GKIVRQKANRRHLLEHKPT RTRRLDGR V+ D R+ K Sbjct: 1 MPKAKTHSGASKRFRTTGSGKIVRQKANRRHLLEHKPTSRTRRLDGRAVVAENDAKRVKK 60 Query: 61 LLNG 64 +L G Sbjct: 61 MLTG 64 >tr|D0L970|D0L970_GORB4 Tax_Id=526226 (rpmI)RecName: Full=50S ribosomal protein L35;[Gordonia bronchialis] Length = 64 Score = 94.4 bits (233), Expect = 4e-18 Identities = 45/63 (71%), Positives = 52/63 (82%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK+KTH G +KRF+ TG+GKIVRQKANRRHLLEHK ++RTRRLDG T VS D RI + Sbjct: 1 MPKSKTHKGTAKRFKVTGSGKIVRQKANRRHLLEHKSSRRTRRLDGTTVVSENDAPRIKR 60 Query: 61 LLN 63 LLN Sbjct: 61 LLN 63 >sp|Q5YYI0|RL35_NOCFA Tax_Id=37329 (rpmI)RecName: Full=50S ribosomal protein L35;[Nocardia farcinica] Length = 64 Score = 92.4 bits (228), Expect = 2e-17 Identities = 43/62 (69%), Positives = 53/62 (85%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK K+HSGASKRF+ +G GK++RQ+ANRRHLLEHKP++RTRRLDG V+AAD R+ K Sbjct: 1 MPKMKSHSGASKRFKVSGKGKLLRQQANRRHLLEHKPSRRTRRLDGTEVVAAADVRRVKK 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 >tr|D1AEY1|D1AEY1_THECD Tax_Id=471852 SubName: Full=Ribosomal protein L35;[Thermomonospora curvata] Length = 71 Score = 90.5 bits (223), Expect = 6e-17 Identities = 42/62 (67%), Positives = 49/62 (79%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK KTHSGA KRF+ TG+GK+ R++ANR HLLEHKP+KRTRRL GR V+ AD I K Sbjct: 8 MPKTKTHSGAKKRFKLTGSGKVTRRRANRNHLLEHKPSKRTRRLAGRVVVADADTKMIKK 67 Query: 61 LL 62 LL Sbjct: 68 LL 69 >sp|Q0SI46|RL35_RHOSR Tax_Id=101510 (rpmI)RecName: Full=50S ribosomal protein L35;[Rhodococcus sp.] Length = 64 Score = 89.0 bits (219), Expect = 2e-16 Identities = 43/63 (68%), Positives = 51/63 (80%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK+KTHSG +KRF+ +G+GKI+RQKA RRHLLEHK TK TRRLDG VS AD RI + Sbjct: 1 MPKSKTHSGTAKRFKVSGSGKILRQKAGRRHLLEHKATKVTRRLDGVAVVSKADTPRIKR 60 Query: 61 LLN 63 LL+ Sbjct: 61 LLD 63 >sp|C1AT08|RL35_RHOOB Tax_Id=632772 (rpmI)RecName: Full=50S ribosomal protein L35;[Rhodococcus opacus] Length = 64 Score = 89.0 bits (219), Expect = 2e-16 Identities = 43/63 (68%), Positives = 51/63 (80%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK+KTHSG +KRF+ +G+GKI+RQKA RRHLLEHK TK TRRLDG VS AD RI + Sbjct: 1 MPKSKTHSGTAKRFKVSGSGKILRQKAGRRHLLEHKATKVTRRLDGVAVVSKADTPRIKR 60 Query: 61 LLN 63 LL+ Sbjct: 61 LLD 63 >sp|Q0RF99|RL35_FRAAA Tax_Id=326424 (rpmI)RecName: Full=50S ribosomal protein L35;[Frankia alni] Length = 64 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/62 (69%), Positives = 51/62 (82%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK K+HSGASKRFR TG+GK+VRQKANRRHLLEHK ++RTRRL G ++ AD RI + Sbjct: 1 MPKQKSHSGASKRFRITGSGKVVRQKANRRHLLEHKSSRRTRRLAGVEPLTKADAGRIKR 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 >tr|D3M4P0|D3M4P0_9ACTO Tax_Id=656024 (rpmI)RecName: Full=50S ribosomal protein L35;[Frankia symbiont of Datisca glomerata] Length = 64 Score = 87.8 bits (216), Expect = 4e-16 Identities = 40/62 (64%), Positives = 50/62 (80%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK KTH+GA+KRFR TG+GK++R++ANR HLLEHK ++RTRRLD +S AD RI K Sbjct: 1 MPKTKTHTGAAKRFRITGSGKVMRRRANRNHLLEHKSSRRTRRLDNEVRLSPADEGRIKK 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 >sp|Q2J854|RL35_FRASC Tax_Id=106370 (rpmI)RecName: Full=50S ribosomal protein L35;[Frankia sp.] Length = 64 Score = 87.4 bits (215), Expect = 5e-16 Identities = 40/62 (64%), Positives = 51/62 (82%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK K+HSGASKRFR TG+GK++RQ+ANRRH LEHK ++ TRRLDG ++ ADN R+ + Sbjct: 1 MPKQKSHSGASKRFRVTGSGKVLRQRANRRHYLEHKTSRLTRRLDGVVPLTKADNRRVKR 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 >tr|D5UDW5|D5UDW5_9CELL Tax_Id=446466 SubName: Full=Ribosomal protein L35;[Cellulomonas flavigena DSM 20109] Length = 64 Score = 87.4 bits (215), Expect = 5e-16 Identities = 42/62 (67%), Positives = 49/62 (79%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK KTHSGA KRFR TGTGK++R++AN RHLLEHK ++RTRR+ G VS AD RI K Sbjct: 1 MPKNKTHSGAKKRFRVTGTGKVMREQANGRHLLEHKSSRRTRRIAGDVVVSPADTPRIKK 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 >sp|A0LUD0|RL35_ACIC1 Tax_Id=351607 (rpmI)RecName: Full=50S ribosomal protein L35;[Acidothermus cellulolyticus] Length = 64 Score = 87.0 bits (214), Expect = 7e-16 Identities = 40/62 (64%), Positives = 51/62 (82%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK KTH+GA KRFR TGTGK++R++ANR HLLEHKP++RTRRL V+AAD +R+ + Sbjct: 1 MPKFKTHTGAGKRFRVTGTGKLMRRRANRNHLLEHKPSRRTRRLWNEVPVAAADTARMRR 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 >tr|D1BII0|D1BII0_SANKS Tax_Id=446469 (rpmI)RecName: Full=50S ribosomal protein L35;[Sanguibacter keddieii] Length = 64 Score = 86.3 bits (212), Expect = 1e-15 Identities = 41/62 (66%), Positives = 50/62 (80%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK KTHSGA KRFR TG+GK++R++AN+RHLLEHK ++R RRL G VSAAD +I K Sbjct: 1 MPKNKTHSGAKKRFRITGSGKVMREQANKRHLLEHKSSRRKRRLSGDLVVSAADVKKIKK 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 >tr|D1XMS3|D1XMS3_9ACTO Tax_Id=647653 (rpmI)RecName: Full=50S ribosomal protein L35;[Streptomyces sp. ACTE] Length = 64 Score = 85.5 bits (210), Expect = 2e-15 Identities = 40/62 (64%), Positives = 50/62 (80%) Query: 1 MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60 MPK KTHSGASKRF+ TG+GK++R+KA +RHLLEHK +K+TR L G T V+ AD +I K Sbjct: 1 MPKNKTHSGASKRFKITGSGKVLREKAGKRHLLEHKSSKKTRSLTGTTVVAPADAKKIKK 60 Query: 61 LL 62 LL Sbjct: 61 LL 62 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.316 0.128 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 453,074,633 Number of extensions: 12833649 Number of successful extensions: 33223 Number of sequences better than 10.0: 2071 Number of HSP's gapped: 33255 Number of HSP's successfully gapped: 2071 Length of query: 64 Length of database: 4,236,830,644 Length adjustment: 36 Effective length of query: 28 Effective length of database: 3,786,547,540 Effective search space: 106023331120 Effective search space used: 106023331120 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 75 (33.5 bits)