BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_3883
         (338 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QZ36|A0QZ36_MYCS2 Tax_Id=246196 SubName: Full=5'-3' exonucl...   667   0.0  
tr|A4TB44|A4TB44_MYCGI Tax_Id=350054 SubName: Full=5'-3' exonucl...   492   e-137
tr|B2HFU7|B2HFU7_MYCMM Tax_Id=216594 SubName: Full=5'-3' exonucl...   491   e-137
tr|A0PQS4|A0PQS4_MYCUA Tax_Id=362242 SubName: Full=5'-3' exonucl...   490   e-137
tr|A1TAN3|A1TAN3_MYCVP Tax_Id=350058 SubName: Full=5'-3' exonucl...   486   e-135
tr|Q73YX8|Q73YX8_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   478   e-133
tr|C6DPX4|C6DPX4_MYCTK Tax_Id=478434 SubName: Full=5-3 exonuclea...   477   e-133
tr|C1AQ09|C1AQ09_MYCBT Tax_Id=561275 SubName: Full=5'-3' exonucl...   477   e-133
tr|A5WP67|A5WP67_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   477   e-133
tr|A1KKD6|A1KKD6_MYCBP Tax_Id=410289 SubName: Full=5'-3' exonucl...   477   e-133
tr|D6G6R0|D6G6R0_MYCTU Tax_Id=478435 SubName: Full=5-3 exonuclea...   477   e-133
tr|D6FCM9|D6FCM9_MYCTU Tax_Id=611303 SubName: Full=5'-3' exonucl...   477   e-133
tr|D5Z4V9|D5Z4V9_MYCTU Tax_Id=537209 SubName: Full=Putative unch...   477   e-133
tr|D5YRQ0|D5YRQ0_MYCTU Tax_Id=515616 SubName: Full=5'-3' exonucl...   477   e-133
tr|D5Y4S8|D5Y4S8_MYCTU Tax_Id=520141 SubName: Full=5'-3' exonucl...   477   e-133
tr|A4KIM7|A4KIM7_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   477   e-133
tr|A0QFC3|A0QFC3_MYCA1 Tax_Id=243243 SubName: Full=5'-3' exonucl...   476   e-132
tr|D6FWA6|D6FWA6_MYCTU Tax_Id=611304 SubName: Full=5'-3' exonucl...   476   e-132
tr|D6F5M0|D6F5M0_MYCTU Tax_Id=611302 SubName: Full=5'-3' exonucl...   476   e-132
tr|D5ZIU8|D5ZIU8_MYCTU Tax_Id=537210 SubName: Full=5-3 exonuclea...   476   e-132
tr|D5YGS1|D5YGS1_MYCTU Tax_Id=520140 SubName: Full=5'-3' exonucl...   476   e-132
tr|A5U4B6|A5U4B6_MYCTA Tax_Id=419947 SubName: Full=Putative 5'-3...   476   e-132
tr|Q7VER0|Q7VER0_MYCBO Tax_Id=1765 SubName: Full=5'-3' exonuclea...   475   e-132
sp|Q10699|EX53_MYCTU Tax_Id=1773 RecName: Full=5'-3' exonuclease...   473   e-131
tr|A2VJJ1|A2VJJ1_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   471   e-131
tr|D5P4R6|D5P4R6_9MYCO Tax_Id=525368 SubName: Full=5'-3' exonucl...   470   e-130
tr|A3PZH2|A3PZH2_MYCSJ Tax_Id=164757 SubName: Full=5'-3' exonucl...   466   e-129
tr|Q1B948|Q1B948_MYCSS Tax_Id=164756 SubName: Full=5'-3' exonucl...   464   e-129
tr|A1UFW2|A1UFW2_MYCSK Tax_Id=189918 SubName: Full=5'-3' exonucl...   464   e-129
tr|D5XUK5|D5XUK5_MYCTU Tax_Id=515617 SubName: Full=5-3 exonuclea...   446   e-123
tr|B1MAK1|B1MAK1_MYCA9 Tax_Id=561007 SubName: Full=Probable 5'-3...   432   e-119
tr|D5PLK4|D5PLK4_COREQ Tax_Id=525370 SubName: Full=5'-3' exonucl...   380   e-103
tr|D0LDU0|D0LDU0_GORB4 Tax_Id=526226 SubName: Full=5'-3' exonucl...   365   6e-99
tr|C7MWU3|C7MWU3_SACVD Tax_Id=471857 SubName: Full=5'-3' exonucl...   358   7e-97
tr|C3JTA6|C3JTA6_RHOER Tax_Id=596309 SubName: Full=5-3 exonuclea...   352   4e-95
tr|C1ARZ1|C1ARZ1_RHOOB Tax_Id=632772 SubName: Full=Putative 5'-3...   351   7e-95
tr|C0ZZT7|C0ZZT7_RHOE4 Tax_Id=234621 SubName: Full=Probable 5'-3...   349   3e-94
tr|Q5YUY4|Q5YUY4_NOCFA Tax_Id=37329 SubName: Full=Putative 5'-3'...   348   4e-94
tr|Q0SIH0|Q0SIH0_RHOSR Tax_Id=101510 SubName: Full=Probable DNA ...   348   8e-94
tr|D5UPM7|D5UPM7_TSUPA Tax_Id=521096 SubName: Full=5'-3' exonucl...   345   4e-93
tr|A4FC00|A4FC00_SACEN Tax_Id=405948 SubName: Full=Potential 5'-...   342   5e-92
tr|C6WIF4|C6WIF4_ACTMD Tax_Id=446462 SubName: Full=5'-3' exonucl...   340   2e-91
tr|D1BRL4|D1BRL4_XYLCX Tax_Id=446471 SubName: Full=5'-3' exonucl...   311   8e-83
tr|D3C5R5|D3C5R5_9ACTO Tax_Id=648999 SubName: Full=5'-3' exonucl...   309   4e-82
tr|D1SCW0|D1SCW0_9ACTO Tax_Id=644283 SubName: Full=5'-3' exonucl...   309   4e-82

>tr|A0QZ36|A0QZ36_MYCS2 Tax_Id=246196 SubName: Full=5'-3'
           exonuclease;[Mycobacterium smegmatis]
          Length = 338

 Score =  667 bits (1722), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MVCDIDVEVASPDALPEVRLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFID 60
           MVCDIDVEVASPDALPEVRLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFID
Sbjct: 1   MVCDIDVEVASPDALPEVRLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFID 60

Query: 61  AISTLVTREKPRRLVVCRDDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQ 120
           AISTLVTREKPRRLVVCRDDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQ
Sbjct: 61  AISTLVTREKPRRLVVCRDDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQ 120

Query: 121 VNMILELLDAFGIPTAGAAGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQV 180
           VNMILELLDAFGIPTAGAAGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQV
Sbjct: 121 VNMILELLDAFGIPTAGAAGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQV 180

Query: 181 RVLYLGRGLAKATKWGPAEVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTA 240
           RVLYLGRGLAKATKWGPAEVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTA
Sbjct: 181 RVLYLGRGLAKATKWGPAEVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTA 240

Query: 241 ASLLAKHGSLQNILDAAHDPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPT 300
           ASLLAKHGSLQNILDAAHDPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPT
Sbjct: 241 ASLLAKHGSLQNILDAAHDPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPT 300

Query: 301 DTLPLAAGDPARVAELAAAYGVSSSISRLQTALDQLPD 338
           DTLPLAAGDPARVAELAAAYGVSSSISRLQTALDQLPD
Sbjct: 301 DTLPLAAGDPARVAELAAAYGVSSSISRLQTALDQLPD 338


>tr|A4TB44|A4TB44_MYCGI Tax_Id=350054 SubName: Full=5'-3'
           exonuclease;[Mycobacterium gilvum]
          Length = 321

 Score =  492 bits (1266), Expect = e-137
 Identities = 246/315 (78%), Positives = 275/315 (87%), Gaps = 1/315 (0%)

Query: 22  APILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDD 81
           +P++LLDGASMWFRSYFGVPSSI APDGRPVNA+RGF+DA+ST++ RE+P RLVVCRDDD
Sbjct: 8   SPLVLLDGASMWFRSYFGVPSSITAPDGRPVNALRGFLDAVSTVIARERPHRLVVCRDDD 67

Query: 82  WRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGF 141
           WRPQWRVDLIPSYKAHRV E  P   PD+EEVPD+LTPQV+MI+E+LDAFGI TAGAA +
Sbjct: 68  WRPQWRVDLIPSYKAHRVLEENPADGPDVEEVPDELTPQVDMIMEILDAFGIATAGAAHY 127

Query: 142 EADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVA 201
           EADDVLGTL+A EERDPVVVVSGDRDLLQLVRDEP P VRVLYLG+GLAKA KWGPAEVA
Sbjct: 128 EADDVLGTLAAAEERDPVVVVSGDRDLLQLVRDEPVP-VRVLYLGKGLAKAVKWGPAEVA 186

Query: 202 EQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPK 261
           + YGVPL+RAG+AY ELALLRGDPSDGLPGV GIGEKTAA+LLA+H SL+NI+ AAHDP 
Sbjct: 187 DTYGVPLERAGSAYVELALLRGDPSDGLPGVPGIGEKTAATLLAQHNSLENIVAAAHDPA 246

Query: 262 SGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYG 321
           S LSKAHR KLL A DYI  AE VVRVATDA + +ST  D LPL+A DP +V ELA  YG
Sbjct: 247 STLSKAHRKKLLAASDYIEKAEPVVRVATDAELDWSTDGDALPLSARDPRKVVELAERYG 306

Query: 322 VSSSISRLQTALDQL 336
           VSSSI RLQ ALD+L
Sbjct: 307 VSSSIGRLQAALDKL 321


>tr|B2HFU7|B2HFU7_MYCMM Tax_Id=216594 SubName: Full=5'-3'
           exonuclease;[Mycobacterium marinum]
          Length = 318

 Score =  491 bits (1264), Expect = e-137
 Identities = 244/318 (76%), Positives = 279/318 (87%), Gaps = 1/318 (0%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           + AP+LLLDGASMWFRSYFGVPSSI APDGRP+NAVRGFID+++ ++T+ +P RL VC D
Sbjct: 1   MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRPQ+RVDLIPSYKAHRVAEPEP G PD+EEVPD+LTPQV+MI+ELLDAFGIP AGAA
Sbjct: 61  LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLDAFGIPAAGAA 120

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           GFEADDVLGTL+A+E+RDPVVVVSGDRDLLQ+V D+P P VRVLYLGRGL+KAT +GP+E
Sbjct: 121 GFEADDVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVP-VRVLYLGRGLSKATLFGPSE 179

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VAE+YG+P +RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AAHD
Sbjct: 180 VAERYGLPAERAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHD 239

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
           PKS ++K  RTKLL A  YI AA +VVRVATDAPVTF+TPTD LPL A DP R AELA  
Sbjct: 240 PKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATE 299

Query: 320 YGVSSSISRLQTALDQLP 337
           YGV SSI+RLQ ALD LP
Sbjct: 300 YGVGSSIARLQKALDALP 317


>tr|A0PQS4|A0PQS4_MYCUA Tax_Id=362242 SubName: Full=5'-3'
           exonuclease;[Mycobacterium ulcerans]
          Length = 318

 Score =  490 bits (1262), Expect = e-137
 Identities = 244/318 (76%), Positives = 278/318 (87%), Gaps = 1/318 (0%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           + AP+LLLDGASMWFRSYFGVPSSI APDGRP+NAVRGFID+++ ++T+ +P RL VC D
Sbjct: 1   MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRPQ+RVDLIPSYKAHRVAEPEP G PD+EEVPD+LTPQV+MI+ELLDAFGIP AGAA
Sbjct: 61  LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLDAFGIPAAGAA 120

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           GFEADDVLGTL+A+E+RDPVVVVSGDRDLLQ+V D+P P VRVLYLGRGL KAT +GP+E
Sbjct: 121 GFEADDVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVP-VRVLYLGRGLPKATLFGPSE 179

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VAE+YG+P +RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AAHD
Sbjct: 180 VAERYGLPAERAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHD 239

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
           PKS ++K  RTKLL A  YI AA +VVRVATDAPVTF+TPTD LPL A DP R AELA  
Sbjct: 240 PKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATE 299

Query: 320 YGVSSSISRLQTALDQLP 337
           YGV SSI+RLQ ALD LP
Sbjct: 300 YGVGSSIARLQKALDALP 317


>tr|A1TAN3|A1TAN3_MYCVP Tax_Id=350058 SubName: Full=5'-3'
           exonuclease;[Mycobacterium vanbaalenii]
          Length = 323

 Score =  486 bits (1251), Expect = e-135
 Identities = 249/321 (77%), Positives = 275/321 (85%), Gaps = 5/321 (1%)

Query: 21  TAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDD 80
           T P++LLDGASMWFRSYFGVPSSI APDGRPVNA+RGF+DA++T++TRE+P RLVVCRDD
Sbjct: 3   TPPLVLLDGASMWFRSYFGVPSSITAPDGRPVNALRGFLDAVATVITRERPHRLVVCRDD 62

Query: 81  DWRPQWRVDLIPSYKAHRVAEPEPDGVP----DIEEVPDDLTPQVNMILELLDAFGIPTA 136
           DWRPQWRVDLIPSYKAHRVA P  +  P    D+EEVPDDLTPQV+MI+E+LDAFGI TA
Sbjct: 63  DWRPQWRVDLIPSYKAHRVAVPAEEANPPTDVDVEEVPDDLTPQVDMIMEMLDAFGIATA 122

Query: 137 GAAGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWG 196
           GA   EADDVLGTL+ RE RDPVVVVSGDRDLLQLVRDEP P VRVLYLGRGLA+AT +G
Sbjct: 123 GAQQCEADDVLGTLAGRETRDPVVVVSGDRDLLQLVRDEPVP-VRVLYLGRGLARATTYG 181

Query: 197 PAEVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDA 256
           P EV+E Y VP+DRAG AYAELALLRGDPSDGLPGV GIGEKTAA+LLA+HGSL+ IL A
Sbjct: 182 PVEVSETYNVPVDRAGPAYAELALLRGDPSDGLPGVPGIGEKTAATLLAQHGSLEAILAA 241

Query: 257 AHDPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAEL 316
           A DPKS LS+AHRTKLL A DYIA A  VVRVATDA V FST  D LPLAA  P +VAEL
Sbjct: 242 AQDPKSKLSRAHRTKLLAASDYIAKAGPVVRVATDADVNFSTDDDALPLAARHPRKVAEL 301

Query: 317 AAAYGVSSSISRLQTALDQLP 337
           A  YGVSSS+ RLQTALD+LP
Sbjct: 302 AERYGVSSSLGRLQTALDKLP 322


>tr|Q73YX8|Q73YX8_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 318

 Score =  478 bits (1231), Expect = e-133
 Identities = 237/315 (75%), Positives = 272/315 (86%), Gaps = 1/315 (0%)

Query: 23  PILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDW 82
           P++LLDGASMWFRSYFGVPSSI APDGRPVNAVRGF+D+++ ++T+++P RLVVC D DW
Sbjct: 4   PLVLLDGASMWFRSYFGVPSSITAPDGRPVNAVRGFLDSLAVVITQQRPSRLVVCLDLDW 63

Query: 83  RPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFE 142
           RPQ+RVDL+PSYKAHRV E EP G PD+EEVPDDLTPQ++MI ELL+A+GIPTAGA GFE
Sbjct: 64  RPQFRVDLVPSYKAHRVPEAEPAGEPDVEEVPDDLTPQIDMIAELLEAYGIPTAGAEGFE 123

Query: 143 ADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVAE 202
           ADDVLGTL+ARE  DPVVVVSGDRDLLQ+V D+P P VRVLYLGRGL+KAT +GP EVAE
Sbjct: 124 ADDVLGTLAARERDDPVVVVSGDRDLLQVVSDDPVP-VRVLYLGRGLSKATLFGPVEVAE 182

Query: 203 QYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPKS 262
            YGVP+DRAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL+ +L AAHDPKS
Sbjct: 183 HYGVPVDRAGPAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLERVLAAAHDPKS 242

Query: 263 GLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYGV 322
            ++K  R KLLGA+DYI AA  VVRVATDAPV  STP+D +PL A DP R AELA   GV
Sbjct: 243 KMAKGLRAKLLGALDYIEAAGAVVRVATDAPVKLSTPSDAVPLVAADPHRTAELATELGV 302

Query: 323 SSSISRLQTALDQLP 337
            SSI+RLQ ALD LP
Sbjct: 303 GSSIARLQKALDALP 317


>tr|C6DPX4|C6DPX4_MYCTK Tax_Id=478434 SubName: Full=5-3
           exonuclease;[Mycobacterium tuberculosis]
          Length = 393

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 75  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 134

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 135 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 194

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 195 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 253

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 254 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 313

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 314 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 373

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 374 RFGVESSIARLQKALDTLP 392


>tr|C1AQ09|C1AQ09_MYCBT Tax_Id=561275 SubName: Full=5'-3'
           exonuclease;[Mycobacterium bovis]
          Length = 355

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 37  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 96

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 97  DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 156

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 157 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 215

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 216 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 275

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 276 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 335

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 336 RFGVESSIARLQKALDTLP 354


>tr|A5WP67|A5WP67_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           5'-3' exonuclease;[Mycobacterium tuberculosis]
          Length = 393

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 75  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 134

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 135 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 194

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 195 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 253

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 254 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 313

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 314 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 373

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 374 RFGVESSIARLQKALDTLP 392


>tr|A1KKD6|A1KKD6_MYCBP Tax_Id=410289 SubName: Full=5'-3'
           exonuclease; EC=3.1.11.-;[Mycobacterium bovis]
          Length = 355

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 37  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 96

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 97  DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 156

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 157 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 215

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 216 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 275

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 276 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 335

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 336 RFGVESSIARLQKALDTLP 354


>tr|D6G6R0|D6G6R0_MYCTU Tax_Id=478435 SubName: Full=5-3
           exonuclease;[Mycobacterium tuberculosis KZN 605]
          Length = 393

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 75  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 134

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 135 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 194

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 195 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 253

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 254 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 313

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 314 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 373

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 374 RFGVESSIARLQKALDTLP 392


>tr|D6FCM9|D6FCM9_MYCTU Tax_Id=611303 SubName: Full=5'-3'
           exonuclease;[Mycobacterium tuberculosis CPHL_A]
          Length = 374

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 56  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 115

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 116 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 175

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 176 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 234

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 235 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 294

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 295 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 354

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 355 RFGVESSIARLQKALDTLP 373


>tr|D5Z4V9|D5Z4V9_MYCTU Tax_Id=537209 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis GM
           1503]
          Length = 393

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 75  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 134

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 135 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 194

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 195 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 253

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 254 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 313

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 314 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 373

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 374 RFGVESSIARLQKALDTLP 392


>tr|D5YRQ0|D5YRQ0_MYCTU Tax_Id=515616 SubName: Full=5'-3'
           exonuclease;[Mycobacterium tuberculosis 02_1987]
          Length = 393

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 75  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 134

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 135 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 194

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 195 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 253

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 254 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 313

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 314 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 373

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 374 RFGVESSIARLQKALDTLP 392


>tr|D5Y4S8|D5Y4S8_MYCTU Tax_Id=520141 SubName: Full=5'-3'
           exonuclease;[Mycobacterium tuberculosis T85]
          Length = 393

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 75  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 134

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 135 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 194

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 195 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 253

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 254 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 313

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 314 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 373

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 374 RFGVESSIARLQKALDTLP 392


>tr|A4KIM7|A4KIM7_MYCTU Tax_Id=395095 SubName: Full=Hypothetical 5-3
           exonuclease;[Mycobacterium tuberculosis str. Haarlem]
          Length = 337

 Score =  477 bits (1228), Expect = e-133
 Identities = 239/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 19  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 78

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 79  DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 138

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 139 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 197

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 198 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 257

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 258 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 317

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 318 RFGVESSIARLQKALDTLP 336


>tr|A0QFC3|A0QFC3_MYCA1 Tax_Id=243243 SubName: Full=5'-3'
           exonuclease;[Mycobacterium avium]
          Length = 313

 Score =  476 bits (1226), Expect = e-132
 Identities = 237/313 (75%), Positives = 270/313 (86%), Gaps = 1/313 (0%)

Query: 25  LLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDWRP 84
           +LLDGASMWFRSYFGVPSSI APDGRPVNAVRGF+D+++ ++T+++P RLVVC D DWRP
Sbjct: 1   MLLDGASMWFRSYFGVPSSITAPDGRPVNAVRGFLDSLAVVITQQRPSRLVVCLDLDWRP 60

Query: 85  QWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFEAD 144
           Q+RVDL+PSYKAHRVAE EP G PD+EEVPDDLTPQ++MI ELL+A+GIPTAGA GFEAD
Sbjct: 61  QFRVDLVPSYKAHRVAEAEPAGEPDVEEVPDDLTPQIDMIAELLEAYGIPTAGAEGFEAD 120

Query: 145 DVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVAEQY 204
           DVLGTL+ARE  DPVVVVSGDRDLLQ+V D+P P VRVLYLGRGL+KAT +GP EVAE Y
Sbjct: 121 DVLGTLAARERDDPVVVVSGDRDLLQVVSDDPVP-VRVLYLGRGLSKATLFGPVEVAEHY 179

Query: 205 GVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPKSGL 264
           GVP+DRAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  +L AAHDPKS +
Sbjct: 180 GVPVDRAGPAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLHRVLAAAHDPKSKM 239

Query: 265 SKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYGVSS 324
           +K  R KLLGA+DYI AA  VVRVATDAPV  STP+D +PL A DP R AELA   GV S
Sbjct: 240 AKGLRAKLLGALDYIEAAGPVVRVATDAPVKLSTPSDAVPLVAADPQRTAELATELGVGS 299

Query: 325 SISRLQTALDQLP 337
           SI+RLQ ALD LP
Sbjct: 300 SIARLQKALDALP 312


>tr|D6FWA6|D6FWA6_MYCTU Tax_Id=611304 SubName: Full=5'-3'
           exonuclease;[Mycobacterium tuberculosis K85]
          Length = 374

 Score =  476 bits (1226), Expect = e-132
 Identities = 238/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P+++LDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 56  RLRSPLVILDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 115

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 116 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 175

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 176 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 234

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 235 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 294

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 295 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 354

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 355 RFGVESSIARLQKALDTLP 373


>tr|D6F5M0|D6F5M0_MYCTU Tax_Id=611302 SubName: Full=5'-3'
           exonuclease;[Mycobacterium tuberculosis T46]
          Length = 374

 Score =  476 bits (1225), Expect = e-132
 Identities = 238/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 56  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 115

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 116 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 175

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 176 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 234

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 235 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 294

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R A+LA 
Sbjct: 295 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTADLAT 354

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 355 RFGVESSIARLQKALDTLP 373


>tr|D5ZIU8|D5ZIU8_MYCTU Tax_Id=537210 SubName: Full=5-3
           exonuclease;[Mycobacterium tuberculosis T17]
          Length = 374

 Score =  476 bits (1225), Expect = e-132
 Identities = 238/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 56  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 115

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 116 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 175

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 176 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 234

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 235 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 294

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R A+LA 
Sbjct: 295 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTADLAT 354

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 355 RFGVESSIARLQKALDTLP 373


>tr|D5YGS1|D5YGS1_MYCTU Tax_Id=520140 SubName: Full=5'-3'
           exonuclease;[Mycobacterium tuberculosis EAS054]
          Length = 374

 Score =  476 bits (1225), Expect = e-132
 Identities = 238/319 (74%), Positives = 274/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 56  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 115

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 116 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 175

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 176 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 234

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 235 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 294

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R A+LA 
Sbjct: 295 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTADLAT 354

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 355 RFGVESSIARLQKALDTLP 373


>tr|A5U4B6|A5U4B6_MYCTA Tax_Id=419947 SubName: Full=Putative 5'-3'
           exonuclease;[Mycobacterium tuberculosis]
          Length = 393

 Score =  476 bits (1224), Expect = e-132
 Identities = 238/319 (74%), Positives = 273/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC 
Sbjct: 75  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCL 134

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 135 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 194

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 195 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 253

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 254 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 313

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD  PL A DP R AELA 
Sbjct: 314 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRFPLVAADPERTAELAT 373

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 374 RFGVESSIARLQKALDTLP 392


>tr|Q7VER0|Q7VER0_MYCBO Tax_Id=1765 SubName: Full=5'-3' exonuclease;
           EC=3.1.11.-;[Mycobacterium bovis]
          Length = 374

 Score =  475 bits (1222), Expect = e-132
 Identities = 238/319 (74%), Positives = 273/319 (85%), Gaps = 1/319 (0%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           RL +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++ +++P RL VC 
Sbjct: 56  RLRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVIIQQRPNRLAVCL 115

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA
Sbjct: 116 DLDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGA 175

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
            GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPA
Sbjct: 176 PGFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPA 234

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA 
Sbjct: 235 EVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 294

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           D K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA 
Sbjct: 295 DRKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELAT 354

Query: 319 AYGVSSSISRLQTALDQLP 337
            +GV SSI+RLQ ALD LP
Sbjct: 355 RFGVESSIARLQKALDTLP 373


>sp|Q10699|EX53_MYCTU Tax_Id=1773 RecName: Full=5'-3' exonuclease;
           EC=3.1.11.-;[Mycobacterium tuberculosis]
          Length = 318

 Score =  473 bits (1217), Expect = e-131
 Identities = 236/318 (74%), Positives = 272/318 (85%), Gaps = 1/318 (0%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           + +P++LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC D
Sbjct: 1   MRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRPQ+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA 
Sbjct: 61  LDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAP 120

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           GFEADDVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPAE
Sbjct: 121 GFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPAE 179

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VAE+YG+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA D
Sbjct: 180 VAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADD 239

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
            K+ ++K  RTKLL A  YI AA+ VVRVATDAPVT STPTD  PL A DP R AELA  
Sbjct: 240 RKTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRFPLVAADPERTAELATR 299

Query: 320 YGVSSSISRLQTALDQLP 337
           +GV SSI+RLQ ALD LP
Sbjct: 300 FGVESSIARLQKALDTLP 317


>tr|A2VJJ1|A2VJJ1_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 313

 Score =  471 bits (1211), Expect = e-131
 Identities = 236/313 (75%), Positives = 269/313 (85%), Gaps = 1/313 (0%)

Query: 25  LLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDWRP 84
           +LLDGASMWFRS+FGVPSSI APDGRPVNAVRGFID+++ ++T+++P RL VC D DWRP
Sbjct: 1   MLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLDWRP 60

Query: 85  QWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFEAD 144
           Q+RVDLIPSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA GFEAD
Sbjct: 61  QFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGFEAD 120

Query: 145 DVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVAEQY 204
           DVLGTL+ RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPAEVAE+Y
Sbjct: 121 DVLGTLATRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPAEVAERY 179

Query: 205 GVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPKSGL 264
           G+P  RAG AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA D K+ +
Sbjct: 180 GLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKTTM 239

Query: 265 SKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYGVSS 324
           +K  RTKLL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R AELA  +GV S
Sbjct: 240 AKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGVES 299

Query: 325 SISRLQTALDQLP 337
           SI+RLQ ALD LP
Sbjct: 300 SIARLQKALDTLP 312


>tr|D5P4R6|D5P4R6_9MYCO Tax_Id=525368 SubName: Full=5'-3'
           exonuclease;[Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 306

 Score =  470 bits (1209), Expect = e-130
 Identities = 235/306 (76%), Positives = 266/306 (86%), Gaps = 1/306 (0%)

Query: 32  MWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDWRPQWRVDLI 91
           MWFRSYFGVPSSI APDGRPVNAVRGFID+++ ++ +++P RLVVC D DWRPQ+RVDL+
Sbjct: 1   MWFRSYFGVPSSITAPDGRPVNAVRGFIDSLAVVINQQRPSRLVVCLDLDWRPQFRVDLV 60

Query: 92  PSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFEADDVLGTLS 151
           PSYKAHRVAE EP G PD+EEVPDDLTPQ++MI+ELLDAFGIPTAGA GFEADDVLGTL+
Sbjct: 61  PSYKAHRVAEAEPAGEPDVEEVPDDLTPQIDMIMELLDAFGIPTAGAEGFEADDVLGTLA 120

Query: 152 AREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVAEQYGVPLDRA 211
           ARE RDPVVVVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPAEVA+ YGVP  RA
Sbjct: 121 ARERRDPVVVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPAEVADHYGVPQHRA 179

Query: 212 GTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPKSGLSKAHRTK 271
           G AYAE AL+RGDPSDGLPGV G+GEKTAA+LLA+HGSL++IL AA DPKS ++K  R+K
Sbjct: 180 GPAYAEFALMRGDPSDGLPGVPGVGEKTAAALLAQHGSLEHILAAARDPKSKMAKGLRSK 239

Query: 272 LLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYGVSSSISRLQT 331
           LLGA DYI AA  VVRVATDAPV+ STPTD LPLAAGDP R A+LA   GV SSI+RLQ 
Sbjct: 240 LLGATDYIEAAGQVVRVATDAPVSLSTPTDALPLAAGDPQRTAKLATKLGVGSSIARLQK 299

Query: 332 ALDQLP 337
           ALD LP
Sbjct: 300 ALDALP 305


>tr|A3PZH2|A3PZH2_MYCSJ Tax_Id=164757 SubName: Full=5'-3'
           exonuclease;[Mycobacterium sp.]
          Length = 316

 Score =  466 bits (1198), Expect = e-129
 Identities = 232/317 (73%), Positives = 274/317 (86%), Gaps = 2/317 (0%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           ++AP+LLLDGASMWFRSYF +PSSI APDGRPVNAVRGF+D ++ L+ RE+P RLVVCRD
Sbjct: 1   MSAPLLLLDGASMWFRSYFALPSSITAPDGRPVNAVRGFLDTVAMLIGRERPSRLVVCRD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
           DDWRPQWRVDL+PSYKAHRVAEP+  G  D+E VPD+LTPQV+MI+E+LDAFGIP AGA 
Sbjct: 61  DDWRPQWRVDLVPSYKAHRVAEPQAAGT-DVEVVPDELTPQVDMIMEMLDAFGIPHAGAP 119

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G+EADDVLGTL+A EERD V+VVSGDRD+LQ+VRD+P  +VRVLYLGRG++KAT +GPAE
Sbjct: 120 GYEADDVLGTLAAAEERDRVIVVSGDRDMLQVVRDDPV-EVRVLYLGRGMSKATLFGPAE 178

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VA+QY VP +RAG AYAELAL+RGDPSDGLPGV G+GEKTAA+LLA+ GSL+ I+ AA+D
Sbjct: 179 VADQYAVPKERAGAAYAELALMRGDPSDGLPGVPGVGEKTAATLLAQFGSLEAIVAAAND 238

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
           PKS +SKA+R K+L A DYI AAE VVRVATDAPVT ST TD LPLAA  P +VA+LA  
Sbjct: 239 PKSKMSKAYRKKMLAAADYIEAAEPVVRVATDAPVTMSTKTDELPLAAAHPRKVAQLAGD 298

Query: 320 YGVSSSISRLQTALDQL 336
            GV+SS+ RLQ ALD L
Sbjct: 299 LGVTSSVGRLQKALDAL 315


>tr|Q1B948|Q1B948_MYCSS Tax_Id=164756 SubName: Full=5'-3'
           exonuclease;[Mycobacterium sp.]
          Length = 316

 Score =  464 bits (1194), Expect = e-129
 Identities = 231/317 (72%), Positives = 273/317 (86%), Gaps = 2/317 (0%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           ++AP+LLLDGASMWFRSYF +PSSI APDGRPVNAVRGF+D ++ L+ RE+P RLVVCRD
Sbjct: 1   MSAPLLLLDGASMWFRSYFALPSSITAPDGRPVNAVRGFLDTVAMLIGRERPSRLVVCRD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
           DDWRPQWRVDL+PSYKAHRVAEP+  G  D+E VPD+LTPQV+MI+E+LDAFGIP AGA 
Sbjct: 61  DDWRPQWRVDLVPSYKAHRVAEPQAAGT-DVEVVPDELTPQVDMIMEMLDAFGIPHAGAP 119

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G+EADDVLGTL+  EERD V+VVSGDRD+LQ+VRD+P  +VRVLYLGRG++KAT +GPAE
Sbjct: 120 GYEADDVLGTLAVAEERDRVIVVSGDRDMLQVVRDDPV-EVRVLYLGRGMSKATLFGPAE 178

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VA+QY VP +RAG AYAELAL+RGDPSDGLPGV G+GEKTAA+LLA+ GSL+ I+ AA+D
Sbjct: 179 VADQYAVPKERAGAAYAELALMRGDPSDGLPGVPGVGEKTAATLLAQFGSLEAIVAAAND 238

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
           PKS +SKA+R K+L A DYI AAE VVRVATDAPVT ST TD LPLAA  P +VA+LA  
Sbjct: 239 PKSKMSKAYRKKMLAAADYIEAAEPVVRVATDAPVTMSTKTDELPLAAAHPRKVAQLAGD 298

Query: 320 YGVSSSISRLQTALDQL 336
            GV+SS+ RLQ ALD L
Sbjct: 299 LGVTSSVGRLQKALDAL 315


>tr|A1UFW2|A1UFW2_MYCSK Tax_Id=189918 SubName: Full=5'-3'
           exonuclease;[Mycobacterium sp.]
          Length = 316

 Score =  464 bits (1194), Expect = e-129
 Identities = 231/317 (72%), Positives = 273/317 (86%), Gaps = 2/317 (0%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           ++AP+LLLDGASMWFRSYF +PSSI APDGRPVNAVRGF+D ++ L+ RE+P RLVVCRD
Sbjct: 1   MSAPLLLLDGASMWFRSYFALPSSITAPDGRPVNAVRGFLDTVAMLIGRERPSRLVVCRD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
           DDWRPQWRVDL+PSYKAHRVAEP+  G  D+E VPD+LTPQV+MI+E+LDAFGIP AGA 
Sbjct: 61  DDWRPQWRVDLVPSYKAHRVAEPQAAGT-DVEVVPDELTPQVDMIMEMLDAFGIPHAGAP 119

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G+EADDVLGTL+  EERD V+VVSGDRD+LQ+VRD+P  +VRVLYLGRG++KAT +GPAE
Sbjct: 120 GYEADDVLGTLAVAEERDRVIVVSGDRDMLQVVRDDPV-EVRVLYLGRGMSKATLFGPAE 178

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VA+QY VP +RAG AYAELAL+RGDPSDGLPGV G+GEKTAA+LLA+ GSL+ I+ AA+D
Sbjct: 179 VADQYAVPKERAGAAYAELALMRGDPSDGLPGVPGVGEKTAATLLAQFGSLEAIVAAAND 238

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
           PKS +SKA+R K+L A DYI AAE VVRVATDAPVT ST TD LPLAA  P +VA+LA  
Sbjct: 239 PKSKMSKAYRKKMLAAADYIEAAEPVVRVATDAPVTMSTKTDELPLAAAHPRKVAQLAGD 298

Query: 320 YGVSSSISRLQTALDQL 336
            GV+SS+ RLQ ALD L
Sbjct: 299 LGVTSSVGRLQKALDAL 315


>tr|D5XUK5|D5XUK5_MYCTU Tax_Id=515617 SubName: Full=5-3
           exonuclease;[Mycobacterium tuberculosis T92]
          Length = 306

 Score =  446 bits (1146), Expect = e-123
 Identities = 225/306 (73%), Positives = 257/306 (83%), Gaps = 1/306 (0%)

Query: 32  MWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDWRPQWRVDLI 91
           MWFRS  GVPSSI APD R VNA RGFID+++ ++T+++P RL VC D DWRPQ+RVDLI
Sbjct: 1   MWFRSIIGVPSSITAPDDRTVNAERGFIDSMAVVITQQRPTRLAVCLDLDWRPQFRVDLI 60

Query: 92  PSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFEADDVLGTLS 151
           PSYKAHRVAEPEP+G PD+EEVPD+LTPQV+MI+ELLDAFGI  AGA GFEADDVLGTL+
Sbjct: 61  PSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGFEADDVLGTLA 120

Query: 152 AREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVAEQYGVPLDRA 211
            RE RDPV+VVSGDRDLLQ+V D+P P VRVLYLGRGLAKAT +GPAEVAE+YG+P  RA
Sbjct: 121 TRERRDPVIVVSGDRDLLQVVADDPVP-VRVLYLGRGLAKATLFGPAEVAERYGLPAHRA 179

Query: 212 GTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPKSGLSKAHRTK 271
           G AYAELALLRGDPSDGLPGV G+GEKTAA+LLA+HGSL  I+ AA D K+ ++K  RTK
Sbjct: 180 GAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKTTMAKGLRTK 239

Query: 272 LLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYGVSSSISRLQT 331
           LL A  YI AA+ VVRVATDAPVT STPTD LPL A DP R A+LA  +GV SSI+RLQ 
Sbjct: 240 LLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTADLATRFGVESSIARLQK 299

Query: 332 ALDQLP 337
           ALD LP
Sbjct: 300 ALDTLP 305


>tr|B1MAK1|B1MAK1_MYCA9 Tax_Id=561007 SubName: Full=Probable 5'-3'
           exonuclease;[Mycobacterium abscessus]
          Length = 337

 Score =  432 bits (1112), Expect = e-119
 Identities = 226/325 (69%), Positives = 253/325 (77%), Gaps = 11/325 (3%)

Query: 23  PILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDW 82
           P+LLLDGAS+WFRSYFGVP SI +PDGRPVNAVRGF+D +S L+T  +P RL VC D DW
Sbjct: 13  PVLLLDGASLWFRSYFGVPDSITSPDGRPVNAVRGFLDTVSQLITLYRPHRLAVCLDLDW 72

Query: 83  RPQWRVDLIPSYKAHRVAEPEP-DGVP---------DIEEVPDDLTPQVNMILELLDAFG 132
           RP WRV  IPSYKAHRV   +P  G P         DIEEVPD+LTPQV+MI ++LDAFG
Sbjct: 73  RPAWRVAAIPSYKAHRVVTDDPLAGRPSDTVGAQTVDIEEVPDELTPQVDMIADILDAFG 132

Query: 133 IPTAGAAGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKA 192
           I +AGAAGFEADDVLGTL+A E RDPV+VVSGDRDLLQ+V D P P VRV Y+GRG AKA
Sbjct: 133 IASAGAAGFEADDVLGTLAANERRDPVIVVSGDRDLLQVVADVPVP-VRVFYMGRGFAKA 191

Query: 193 TKWGPAEVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQN 252
           T +GP EVAEQYGVPL RAG AYAELALLRGDPSDGLPGV G+GEKTAA LLA+ GSL  
Sbjct: 192 TLFGPTEVAEQYGVPLARAGAAYAELALLRGDPSDGLPGVPGVGEKTAAKLLAEFGSLDG 251

Query: 253 ILDAAHDPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPAR 312
           IL AA DPKSGL+KA R KL  A  Y+AAAE VVRVA DAPV     +D LPL A DP R
Sbjct: 252 ILTAADDPKSGLAKAVRAKLQAATVYMAAAEPVVRVAVDAPVIVDRDSDALPLTARDPRR 311

Query: 313 VAELAAAYGVSSSISRLQTALDQLP 337
           VAEL A  G+ S+++RLQ ALD LP
Sbjct: 312 VAELGAELGIGSAVTRLQKALDGLP 336


>tr|D5PLK4|D5PLK4_COREQ Tax_Id=525370 SubName: Full=5'-3'
           exonuclease;[Rhodococcus equi ATCC 33707]
          Length = 317

 Score =  380 bits (976), Expect = e-103
 Identities = 199/315 (63%), Positives = 243/315 (77%), Gaps = 5/315 (1%)

Query: 19  RLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCR 78
           R++ P+LLLDGAS+WFR+++ +P S+ APDGRPVNAVRGF D ++ L+TR +P RL VC 
Sbjct: 3   RMSGPLLLLDGASLWFRAFYALPESMTAPDGRPVNAVRGFTDMVAALITRTQPSRLAVCL 62

Query: 79  DDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGA 138
           D DWRPQ+RVD +PSYKAHRVAE   DG    EEVPD LTPQV+MI+++LDA GI TAGA
Sbjct: 63  DLDWRPQFRVDAVPSYKAHRVAEGS-DG--SAEEVPDTLTPQVDMIMDVLDAAGIATAGA 119

Query: 139 AGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPA 198
           AG EADDVLGTL+A+E+ D VVVVSGDRDLLQ+V D+P   VRVLY+GRGLAKA  +GP 
Sbjct: 120 AGLEADDVLGTLAAQEKTDTVVVVSGDRDLLQVVADDPVA-VRVLYVGRGLAKAELFGPE 178

Query: 199 EVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAH 258
           EVA +YGVP DRAG AYAELALLRGD SDGLPGV G+GEKTA++LL +HGSL+++  AA 
Sbjct: 179 EVAAKYGVPADRAGAAYAELALLRGDSSDGLPGVKGVGEKTASTLLLRHGSLRDLRAAAA 238

Query: 259 DPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
           DP   ++K  R KL  A DY+ AA  VVRV TDA V  S P D LP    D AR+ ++AA
Sbjct: 239 DPAGDVAKGIRAKLDAAADYLDAALPVVRVVTDADVRLSRP-DVLPRVPADSARLDKVAA 297

Query: 319 AYGVSSSISRLQTAL 333
             G+  S++RL TA+
Sbjct: 298 ELGIERSVARLLTAM 312


>tr|D0LDU0|D0LDU0_GORB4 Tax_Id=526226 SubName: Full=5'-3'
           exonuclease, N-terminal resolvase-like domain
           protein;[Gordonia bronchialis]
          Length = 347

 Score =  365 bits (936), Expect = 6e-99
 Identities = 191/327 (58%), Positives = 234/327 (71%), Gaps = 12/327 (3%)

Query: 18  VRLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVC 77
           V +T  ++LLDGAS+WFRS++ +P  + APDGRPVNAVRGF+D I+ LVTRE+P RLVVC
Sbjct: 15  VGVTDSLMLLDGASLWFRSFYALPEKMTAPDGRPVNAVRGFLDTIANLVTRERPTRLVVC 74

Query: 78  RDDDWRPQWRVDLIPSYKAHRVAEPEPDGVPD----IEEVPDDLTPQVNMILELLDAFGI 133
            D DWRP +R DLIPSYKAHRVA P   G  D    +EEVPD LTPQV+MI+ +L+  GI
Sbjct: 75  LDLDWRPSFRTDLIPSYKAHRVATPAASGTGDSEIDVEEVPDTLTPQVDMIMRVLECAGI 134

Query: 134 PTAGAAGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKAT 193
             +GA G EADDV+GTL+  E +DPVVVVSGDRDLLQ+V D+P P VRVLY+GRGLAKA 
Sbjct: 135 ARSGAVGCEADDVIGTLAYEEAQDPVVVVSGDRDLLQVVADDPVP-VRVLYVGRGLAKAE 193

Query: 194 KWGPAEVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNI 253
             GP EVA +YGVP DRAG AYAE+++LRGDPSDGLPGV G+GEKTAA+L+++ GSL N+
Sbjct: 194 MMGPDEVAARYGVPADRAGMAYAEMSMLRGDPSDGLPGVPGVGEKTAATLISEFGSLDNL 253

Query: 254 LDAAHDPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFS-------TPTDTLPLA 306
             AA DP S +    R  +L + DY+ AA TVV V TDA    S         TD LP  
Sbjct: 254 EAAAADPSSSVPTRARKAILASADYLDAARTVVLVRTDADTIDSWTADEDAAGTDRLPAQ 313

Query: 307 AGDPARVAELAAAYGVSSSISRLQTAL 333
             DP  +A L    G+ +S++RL  AL
Sbjct: 314 PADPDGLARLIEELGIGTSVARLAKAL 340


>tr|C7MWU3|C7MWU3_SACVD Tax_Id=471857 SubName: Full=5'-3'
           exonuclease (Including N-terminal domain of
           PolI);[Saccharomonospora viridis]
          Length = 320

 Score =  358 bits (918), Expect = 7e-97
 Identities = 187/314 (59%), Positives = 234/314 (74%), Gaps = 3/314 (0%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           +TAP++LLD AS++FRS+F +P S+ APDG PVNAVRGF D ++ ++T  +P RLV C D
Sbjct: 1   MTAPLVLLDAASLYFRSFFALPESLTAPDGTPVNAVRGFADTVARVLTDRRPARLVACLD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRP++RV  +PSYKAHRVAE   +G PD+EEVPD LTPQV +ILELL+A GI TA A 
Sbjct: 61  ADWRPEFRVRALPSYKAHRVAESSEEG-PDVEEVPDTLTPQVPIILELLEAVGIATAEAE 119

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           GFEADDV+GTL+ARE + PV VV+GDRDL QLVR EP+P V V+Y+G+G AKA   GPAE
Sbjct: 120 GFEADDVIGTLAAREAQLPVEVVTGDRDLFQLVRSEPSP-VSVIYVGKGWAKAEVLGPAE 178

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VA +YG+P + AG AYA++A+LRGDPSDGLPGV GIGEKTAA L+ + GSL+ ++ AA D
Sbjct: 179 VAARYGLPAEHAGAAYADMAMLRGDPSDGLPGVPGIGEKTAAKLVTRFGSLEALVAAARD 238

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
               +    RTKL+ + DY+AAA  VVRVATDAPV      D +P     P RVAELA  
Sbjct: 239 GHPDVPPRARTKLVESSDYLAAAPLVVRVATDAPV-IGVDDDHVPHEPVAPERVAELAER 297

Query: 320 YGVSSSISRLQTAL 333
           Y +  S++RL  AL
Sbjct: 298 YNLGGSVTRLLAAL 311


>tr|C3JTA6|C3JTA6_RHOER Tax_Id=596309 SubName: Full=5-3
           exonuclease;[Rhodococcus erythropolis SK121]
          Length = 321

 Score =  352 bits (903), Expect = 4e-95
 Identities = 188/317 (59%), Positives = 234/317 (73%), Gaps = 7/317 (2%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           ++ P+LLLDGAS+WFR+++ +P S   PDGRPVNAVRGF D +++L+T+ +P RL VC D
Sbjct: 1   MSGPLLLLDGASLWFRAFYALPESFVDPDGRPVNAVRGFTDMVASLITKHQPSRLAVCLD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRPQ+RVD +P+YKAHRV E   DG    EEVPD LTPQV+MI+++L A GI TAGA 
Sbjct: 61  LDWRPQFRVDAVPTYKAHRVEEGS-DGAS--EEVPDTLTPQVDMIMDVLAAAGIATAGAV 117

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G EADDVLGTL+A E  D  VVVSGDRDLLQ+V DE  P VRVLY+GRGL+KA  +GP E
Sbjct: 118 GLEADDVLGTLAATEREDLTVVVSGDRDLLQVVTDEYVP-VRVLYVGRGLSKAELFGPVE 176

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VAE+YGVP DRAG AYAELA+LRGD SDGLPG+ G+GEKTA++L+ ++GSL  +  AA D
Sbjct: 177 VAEKYGVPGDRAGEAYAELAVLRGDASDGLPGIKGVGEKTASTLMLRYGSLAGLRAAAAD 236

Query: 260 PKSGLSKAHRTKLLG--AVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELA 317
           P+S ++K  R KL    A+ Y+ AA  VVRV  DA V FS   D LP    DPAR+ E+A
Sbjct: 237 PESDMAKGIRAKLTSPEAMAYLDAALPVVRVVRDADVQFS-KDDRLPATPVDPARLEEVA 295

Query: 318 AAYGVSSSISRLQTALD 334
           A+  +  S  RL  AL+
Sbjct: 296 ASLNIERSAGRLAAALE 312


>tr|C1ARZ1|C1ARZ1_RHOOB Tax_Id=632772 SubName: Full=Putative 5'-3'
           exonuclease; EC=3.1.11.-;[Rhodococcus opacus]
          Length = 321

 Score =  351 bits (901), Expect = 7e-95
 Identities = 188/317 (59%), Positives = 230/317 (72%), Gaps = 5/317 (1%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           +T P+LLLDGAS+WFR+Y+ +P SI +PDGR VNAVRGF D ++ L+T+ +P RL VC D
Sbjct: 4   MTGPLLLLDGASLWFRAYYALPDSITSPDGRSVNAVRGFTDMVAALITKHQPSRLAVCLD 63

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRP +RV+ +P+YKAHRVAE   D     EEVPD L+PQV MIL++L A GI TAGA 
Sbjct: 64  LDWRPAFRVEAVPTYKAHRVAE---DTGGAEEEVPDTLSPQVPMILDVLAATGIATAGAE 120

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G EADDVLGTL+A E RD V+VV+GDRDLLQ+V D+P P VRVLY+ RGLAKA   GP E
Sbjct: 121 GLEADDVLGTLAATETRDAVIVVTGDRDLLQVVTDDPVP-VRVLYVVRGLAKAELLGPEE 179

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VA +YGVP DRAG AYAELALLRGD SDGLPGV GIGEKTA+SL+ ++GSL  +  AA D
Sbjct: 180 VAAKYGVPADRAGEAYAELALLRGDSSDGLPGVKGIGEKTASSLIMQYGSLAALRAAAVD 239

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
           P+S ++K  R K   A DY+ AA  VVRV  DA V  S   DTLP    D  R+  LA  
Sbjct: 240 PESDMAKGARAKFAAAADYLDAALPVVRVVRDAEVELSR-EDTLPAKPVDADRLGRLADE 298

Query: 320 YGVSSSISRLQTALDQL 336
            G+ +S+ RL  A+ ++
Sbjct: 299 LGIENSVGRLTAAMKKV 315


>tr|C0ZZT7|C0ZZT7_RHOE4 Tax_Id=234621 SubName: Full=Probable 5'-3'
           exonuclease; EC=3.1.11.-;[Rhodococcus erythropolis]
          Length = 321

 Score =  349 bits (895), Expect = 3e-94
 Identities = 186/316 (58%), Positives = 232/316 (73%), Gaps = 7/316 (2%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           ++ P+LLLDGAS+WFR+++ +P S   PDGRPVNAVRGF D +++L+T+ +P RL VC D
Sbjct: 1   MSGPLLLLDGASLWFRAFYALPESFVDPDGRPVNAVRGFTDMVASLITKHQPSRLAVCLD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRPQ+RVD +P+YKAHRV E   DG    EEVPD LTPQV+MI+++L A GI TAGA 
Sbjct: 61  LDWRPQFRVDAVPTYKAHRVEEGS-DG--SSEEVPDTLTPQVDMIMDVLAAAGIATAGAV 117

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G EADDVLGTL+A E  D  VVVSGDRDLLQ+V DE  P VRVLY+GRGL++A  +GP E
Sbjct: 118 GLEADDVLGTLAATEREDLTVVVSGDRDLLQVVTDEYVP-VRVLYVGRGLSRAELFGPVE 176

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VAE+YGVP DRAG AYAELA+LRGD SDGLPG+ G+GEKTA++L+ ++GSL  +  AA D
Sbjct: 177 VAEKYGVPGDRAGEAYAELAVLRGDASDGLPGIKGVGEKTASTLMLRYGSLAGLRAAAAD 236

Query: 260 PKSGLSKAHRTKLLG--AVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELA 317
           P+S ++K  R KL    A+ ++ AA  VVRV  DA V FS   D LP    DPAR  E+A
Sbjct: 237 PESDMAKGIRAKLTSPEAIAHLDAALPVVRVVRDADVQFS-KDDQLPATPADPARFEEVA 295

Query: 318 AAYGVSSSISRLQTAL 333
           A+  +  S  RL  AL
Sbjct: 296 ASLNIERSAGRLAAAL 311


>tr|Q5YUY4|Q5YUY4_NOCFA Tax_Id=37329 SubName: Full=Putative 5'-3'
           exonuclease;[Nocardia farcinica]
          Length = 326

 Score =  348 bits (894), Expect = 4e-94
 Identities = 183/318 (57%), Positives = 224/318 (70%), Gaps = 4/318 (1%)

Query: 16  PEVRLTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLV 75
           P      P+LLLDGAS+WFR++  +P  + APDGR VNAVRGF D +++L+TR  P RLV
Sbjct: 8   PAATTPCPLLLLDGASLWFRAFHAIPDKLTAPDGRSVNAVRGFTDMVASLITRFGPGRLV 67

Query: 76  VCRDDDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPT 135
           V  D DWRP +RV+L+PSYK HR+   +P G P  E VPD LTPQV+MIL++L A GI T
Sbjct: 68  VALDLDWRPTFRVELVPSYKTHRL---DPSGDPTAELVPDRLTPQVDMILDVLAAAGIAT 124

Query: 136 AGAAGFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKW 195
            GAAG EADDVLGTL+ RE  D VVVVSGDRDLLQLVRD+PAP VRV Y GRGLAKA  +
Sbjct: 125 GGAAGLEADDVLGTLADRERDDDVVVVSGDRDLLQLVRDDPAPPVRVFYAGRGLAKAELF 184

Query: 196 GPAEVAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILD 255
           GPAEV+ +YGVPL+ AG AYA++A LRGD SDGLPGV GIG+K+AA+L+++ GSL+ +  
Sbjct: 185 GPAEVSAKYGVPLENAGPAYADMATLRGDASDGLPGVPGIGDKSAATLISRFGSLEALCA 244

Query: 256 AAHDPKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAE 315
           A  D  + L+   R KL  A DY+ AA  VVRV  DA V  S P DTLP    D  R+ +
Sbjct: 245 AVEDADADLAPGVRAKLRAAEDYLKAAAPVVRVVRDATVDLSRP-DTLPTEPADRDRLLD 303

Query: 316 LAAAYGVSSSISRLQTAL 333
           L   Y   S + RL  A+
Sbjct: 304 LGTRYNAESPVQRLIKAM 321


>tr|Q0SIH0|Q0SIH0_RHOSR Tax_Id=101510 SubName: Full=Probable DNA
           polymerase I;[Rhodococcus sp.]
          Length = 318

 Score =  348 bits (892), Expect = 8e-94
 Identities = 187/317 (58%), Positives = 228/317 (71%), Gaps = 5/317 (1%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           +T P+LLLDGAS+WFR+Y+ +P SI +PDGR VNAVRGF D ++ L+T+ +P RL VC D
Sbjct: 1   MTGPLLLLDGASLWFRAYYALPDSITSPDGRSVNAVRGFTDMVAALITKHQPSRLAVCLD 60

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRP +RV+ +P+YKAHRVAE   D     EEVPD L+PQV MIL++L A GI TAGA 
Sbjct: 61  LDWRPAFRVEAVPTYKAHRVAE---DTGGAEEEVPDTLSPQVPMILDVLAATGIATAGAE 117

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G EADDVLGTL+A E RD  +VV+GDRDLLQ+V D P P VRVLY+ RGLAKA   GP E
Sbjct: 118 GLEADDVLGTLAAIETRDTTIVVTGDRDLLQVVTDAPVP-VRVLYVVRGLAKAELLGPDE 176

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           VA +YGVP DRAG AYAELALLRGD SDGLPGV GIGEKTA+SL+ ++GSL  +  AA D
Sbjct: 177 VAAKYGVPADRAGEAYAELALLRGDSSDGLPGVKGIGEKTASSLIMQYGSLAALRAAAVD 236

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
           P+S ++K  R K   A DY+ AA  VVRV  DA V  S   DTLP    D  R+  LA  
Sbjct: 237 PESDMAKGARAKFAAAADYLDAALPVVRVVRDAEVELSR-EDTLPAEPVDADRLGRLAEE 295

Query: 320 YGVSSSISRLQTALDQL 336
            G+ +S+ RL  A+ ++
Sbjct: 296 LGIENSVGRLTAAMKKV 312


>tr|D5UPM7|D5UPM7_TSUPA Tax_Id=521096 SubName: Full=5'-3'
           exonuclease, N-terminal resolvase-like domain
           protein;[Tsukamurella paurometabola DSM 20162]
          Length = 320

 Score =  345 bits (886), Expect = 4e-93
 Identities = 182/311 (58%), Positives = 221/311 (71%), Gaps = 5/311 (1%)

Query: 23  PILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDW 82
           P++LLD A +WFR+Y+ +P  +KA DGR VNA+RGF+D  S L+   +P RLV C D DW
Sbjct: 13  PLMLLDSAGLWFRAYYAIPDKVKAADGRSVNALRGFLDMTSQLIATHRPGRLVACLDLDW 72

Query: 83  RPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFE 142
           RP +RVDL+P+YK HRVAE   DG    EEVPD L PQV+MILE+LDA GI TAGA G E
Sbjct: 73  RPAFRVDLLPTYKTHRVAEDAEDGA---EEVPDTLAPQVDMILEVLDAVGIATAGAEGLE 129

Query: 143 ADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVAE 202
           ADDVLGTL+A+E+ DPV+VVSGDRDLLQ+  D P P V+ LY+GRG+AKA  +GPAEVAE
Sbjct: 130 ADDVLGTLAAQEQVDPVIVVSGDRDLLQVADDTPPP-VKCLYIGRGIAKAEMFGPAEVAE 188

Query: 203 QYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPKS 262
           +YG+P DRAG AYAELALLRGDPSDGLPGV GIGEKTA+ LL ++GSL  I DAA    S
Sbjct: 189 KYGLPADRAGEAYAELALLRGDPSDGLPGVPGIGEKTASKLLLQYGSLAAIRDAAAQQPS 248

Query: 263 GLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYGV 322
            L       ++ + DY+ AA  VV V   A V  S P D +P    DP R+AELA    +
Sbjct: 249 PLPARAAASIVNSSDYLDAAWDVVWVRRAADVAVSGP-DAVPAEPRDPQRLAELAVELRI 307

Query: 323 SSSISRLQTAL 333
            + + RL  AL
Sbjct: 308 GAQVERLLAAL 318


>tr|A4FC00|A4FC00_SACEN Tax_Id=405948 SubName: Full=Potential 5'-3'
           exonuclease; EC=3.1.11.-;[Saccharopolyspora erythraea]
          Length = 305

 Score =  342 bits (876), Expect = 5e-92
 Identities = 179/309 (57%), Positives = 221/309 (71%), Gaps = 6/309 (1%)

Query: 25  LLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDWRP 84
           +L+D A +WFRSYF +P S+ APDG PVN+VRGF D ++ LVT  +P RLV C D+DWRP
Sbjct: 1   MLIDSAGLWFRSYFALPDSLTAPDGTPVNSVRGFCDMLAKLVTERRPARLVACLDNDWRP 60

Query: 85  QWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFEAD 144
           Q+RVD +PSYKAHRVAE +PD     EEVPD LTPQ+ +ILELLDA GI TA A GFEAD
Sbjct: 61  QFRVDALPSYKAHRVAEEDPDA----EEVPDTLTPQIPVILELLDALGIATAEAEGFEAD 116

Query: 145 DVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVAEQY 204
           DV+G L+ RE +D V VV+GDRDL QLVR EP P VRV+Y+G GL+KA  +GP E+AE+Y
Sbjct: 117 DVIGALAHRETQDRVEVVTGDRDLFQLVRTEPTP-VRVIYVGGGLSKAQNYGPEELAERY 175

Query: 205 GVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPKSGL 264
           G+   RAG  YA++A+LRGDPSDGLPGVAGIGEKTAA L+ + GSL  +L AA +  +G+
Sbjct: 176 GLSPGRAGDDYADMAVLRGDPSDGLPGVAGIGEKTAAKLITQFGSLDALLAAAVE-GTGV 234

Query: 265 SKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYGVSS 324
           +   R  L  A DY+AAA  VVR    APV      D LP  A D  RV EL   +G+ +
Sbjct: 235 TPRVRALLADAADYLAAAPAVVRTVNTAPVVVDRVDDALPSKAVDHERVVELQKRWGLGA 294

Query: 325 SISRLQTAL 333
           S+ RL  A+
Sbjct: 295 SVDRLLAAV 303


>tr|C6WIF4|C6WIF4_ACTMD Tax_Id=446462 SubName: Full=5'-3'
           exonuclease;[Actinosynnema mirum]
          Length = 349

 Score =  340 bits (871), Expect = 2e-91
 Identities = 182/317 (57%), Positives = 228/317 (71%), Gaps = 8/317 (2%)

Query: 20  LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79
           +++P++L+D AS++FRS++ +P S+ APDG PVNAVRGF+D I+ +V      RLV C D
Sbjct: 35  VSSPLVLMDAASLYFRSFYALPESMTAPDGTPVNAVRGFVDTIAKIVNDRNASRLVACLD 94

Query: 80  DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139
            DWRP++RV  +PSYKAHRVAE       D EEVPD LTPQV +IL++LDA GI TA A 
Sbjct: 95  ADWRPEFRVAALPSYKAHRVAES-----GDAEEVPDTLTPQVPIILDVLDAVGIATAEAP 149

Query: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           G+EADDV+GTL+ARE  +PV VV+GDRDL Q+VR  P P   VLYLGRG AKA   GPAE
Sbjct: 150 GYEADDVIGTLAARETTNPVEVVTGDRDLFQVVRTTPTP-AGVLYLGRGWAKAELVGPAE 208

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           +A +Y +P + AG AYA +A+LRGDPSDGLPGVAGIGEKTAA L+ + GSL+ +L A HD
Sbjct: 209 LAAKYALPEEDAGRAYAGMAVLRGDPSDGLPGVAGIGEKTAAKLITEFGSLEALLAAVHD 268

Query: 260 PKS-GLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAA 318
            +   L+   R  L+ A DY+A A TVV VA DAPVT     DTLP    DPAR+ EL  
Sbjct: 269 GRDRKLTTKARNALIAAEDYLAVAPTVVNVALDAPVT-QDRDDTLPTTPADPARLTELTK 327

Query: 319 AYGVSSSISRLQTALDQ 335
            +G+ SSI RL TAL++
Sbjct: 328 RWGLGSSIPRLVTALER 344


>tr|D1BRL4|D1BRL4_XYLCX Tax_Id=446471 SubName: Full=5'-3'
           exonuclease;[Xylanimonas cellulosilytica]
          Length = 313

 Score =  311 bits (797), Expect = 8e-83
 Identities = 173/314 (55%), Positives = 219/314 (69%), Gaps = 12/314 (3%)

Query: 24  ILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDDWR 83
           +LLLD AS++FR+++GVP S+++P G PVNA+RG +D I+ LVT  +P RLV C DDDWR
Sbjct: 3   LLLLDTASLYFRAFYGVPDSLRSPRGEPVNAIRGLLDTIAFLVTEHRPERLVACWDDDWR 62

Query: 84  PQWRVDLIPSYKAHRVAEPEP-DGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGFE 142
           PQWRVDLI SYKAHRVA P+   G  D+EEVPD L+PQV +I  +L+A GI   G+ GFE
Sbjct: 63  PQWRVDLIGSYKAHRVAVPDAGPGGTDVEEVPDLLSPQVPVIASVLEAIGIARIGSPGFE 122

Query: 143 ADDVLGTLSARE---ERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199
           ADDV+GTL ARE    R P  +++GDRDL QLV D+    VRVLY  RG+        A 
Sbjct: 123 ADDVIGTLVAREVAAGRRPTSIMTGDRDLFQLVDDDAG--VRVLYPARGVRDPDVVDQAR 180

Query: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259
           +AE+YGVP   +G AYA++A+LRGDPSDGLPGV GIGEKTAA LLA+ G+L  +L AA D
Sbjct: 181 LAEKYGVP---SGDAYADMAVLRGDPSDGLPGVVGIGEKTAAGLLARFGTLDGVL-AARD 236

Query: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319
              GL+ A + +L  A +Y+  A TVVRVATDAP+      D LP AA  P  +  L   
Sbjct: 237 SGFGLTPAQQRRLTEAAEYLTVAPTVVRVATDAPL--PDFDDALPRAAAYPEALQLLTER 294

Query: 320 YGVSSSISRLQTAL 333
           +G+ SS+SR+ TAL
Sbjct: 295 WGLRSSVSRVLTAL 308


>tr|D3C5R5|D3C5R5_9ACTO Tax_Id=648999 SubName: Full=5'-3'
           exonuclease;[Micromonospora sp. L5]
          Length = 307

 Score =  309 bits (791), Expect = 4e-82
 Identities = 174/312 (55%), Positives = 213/312 (68%), Gaps = 16/312 (5%)

Query: 23  PILLLDGASMWFRSYFGVP-SSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDD 81
           PILL+D  S++FR+YFG+P S+ K  DG+PVNAVRGF+D ++ LV   +P R++   D D
Sbjct: 6   PILLIDSPSLYFRAYFGIPESAAKTGDGQPVNAVRGFLDMLAQLVRTRRPDRMICAFDHD 65

Query: 82  WRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGF 141
           WRP WRV+L+PSYKAHRVA   P+G    E VPD L+PQV MILE+LDA GIP  GA G+
Sbjct: 66  WRPAWRVELLPSYKAHRVA---PEGG---EVVPDTLSPQVPMILEVLDALGIPAVGATGY 119

Query: 142 EADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVA 201
           EADDVLGTL+  +   PV VVSGDRDL QLV D  A  VR+LY+GRG+AK      A V 
Sbjct: 120 EADDVLGTLAVTQP-GPVEVVSGDRDLFQLVDD--AHPVRLLYVGRGVAKLDDCDDAAVR 176

Query: 202 EQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPK 261
            +YGVP DR    YA+ A LRGDPSDGLPGVAG+GEKTAA L+ ++G L  IL A  DP+
Sbjct: 177 TRYGVPADR----YADFAALRGDPSDGLPGVAGVGEKTAARLIDRYGGLDGILAALDDPR 232

Query: 262 SGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYG 321
           SG +   R KL  A DY+A A  VVRVATD P+    P   LP +  DP R+ ELA  + 
Sbjct: 233 SGFAPGLRAKLDAARDYLAVAPKVVRVATDVPLPELDP--ALPTSPADPDRLLELAQRWN 290

Query: 322 VSSSISRLQTAL 333
           ++ S  RL  AL
Sbjct: 291 LAGSCRRLVDAL 302


>tr|D1SCW0|D1SCW0_9ACTO Tax_Id=644283 SubName: Full=5'-3'
           exonuclease;[Micromonospora aurantiaca ATCC 27029]
          Length = 307

 Score =  309 bits (791), Expect = 4e-82
 Identities = 174/312 (55%), Positives = 213/312 (68%), Gaps = 16/312 (5%)

Query: 23  PILLLDGASMWFRSYFGVP-SSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRDDD 81
           PILL+D  S++FR+YFG+P S+ K  DG+PVNAVRGF+D ++ LV   +P R++   D D
Sbjct: 6   PILLIDSPSLYFRAYFGIPESAAKTGDGQPVNAVRGFLDMLAQLVRTRRPDRMICAFDHD 65

Query: 82  WRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAAGF 141
           WRP WRV+L+PSYKAHRVA   P+G    E VPD L+PQV MILE+LDA GIP  GA G+
Sbjct: 66  WRPAWRVELLPSYKAHRVA---PEGG---EVVPDTLSPQVPMILEVLDALGIPAVGATGY 119

Query: 142 EADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAEVA 201
           EADDVLGTL+  +   PV VVSGDRDL QLV D  A  VR+LY+GRG+AK      A V 
Sbjct: 120 EADDVLGTLAVTQP-GPVEVVSGDRDLFQLVDD--AHPVRLLYVGRGVAKLDDCDDAAVR 176

Query: 202 EQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHDPK 261
            +YGVP DR    YA+ A LRGDPSDGLPGVAG+GEKTAA L+ ++G L  IL A  DP+
Sbjct: 177 TRYGVPADR----YADFAALRGDPSDGLPGVAGVGEKTAARLIDRYGGLDGILAALDDPR 232

Query: 262 SGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAAYG 321
           SG +   R KL  A DY+A A  VVRVATD P+    P   LP +  DP R+ ELA  + 
Sbjct: 233 SGFAPGLRAKLDAARDYLAVAPKVVRVATDVPLPELDP--ALPTSPADPDRLLELAQRWN 290

Query: 322 VSSSISRLQTAL 333
           ++ S  RL  AL
Sbjct: 291 LAGSCRRLVDAL 302


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.317    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 2,890,130,425
Number of extensions: 128563255
Number of successful extensions: 377352
Number of sequences better than 10.0: 2956
Number of HSP's gapped: 370494
Number of HSP's successfully gapped: 2977
Length of query: 338
Length of database: 4,236,830,644
Length adjustment: 138
Effective length of query: 200
Effective length of database: 2,510,745,412
Effective search space: 502149082400
Effective search space used: 502149082400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)