BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3896 (64 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0QZ48|PUP_MYCS2 Tax_Id=246196 (pup)RecName: Full=Prokaryotic... 76 1e-12 sp|A1TAP5|PUP_MYCVP Tax_Id=350058 (pup)RecName: Full=Prokaryotic... 71 5e-11 sp|O33246|PUP_MYCTU Tax_Id=1773 (pup)RecName: Full=Prokaryotic u... 69 2e-10 sp|A5U4D7|PUP_MYCTA Tax_Id=419947 (pup)RecName: Full=Prokaryotic... 69 2e-10 sp|A1UHS8|PUP_MYCSK Tax_Id=189918 (pup)RecName: Full=Prokaryotic... 69 2e-10 sp|A3Q194|PUP_MYCSJ Tax_Id=164757 (pup)RecName: Full=Prokaryotic... 69 2e-10 sp|C1AQ27|PUP_MYCBT Tax_Id=561275 (pup)RecName: Full=Prokaryotic... 69 2e-10 sp|A1KKF4|PUP_MYCBP Tax_Id=410289 (pup)RecName: Full=Prokaryotic... 69 2e-10 sp|Q7TZ12|PUP_MYCBO Tax_Id=1765 (pup)RecName: Full=Prokaryotic u... 69 2e-10 tr|C6DPV0|C6DPV0_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 69 2e-10 tr|A5WP85|A5WP85_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 69 2e-10 tr|D6G6N7|D6G6N7_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 69 2e-10 tr|D6FWC5|D6FWC5_MYCTU Tax_Id=611304 SubName: Full=Predicted pro... 69 2e-10 tr|D6FCP9|D6FCP9_MYCTU Tax_Id=611303 SubName: Full=Putative unch... 69 2e-10 tr|D6F5N8|D6F5N8_MYCTU Tax_Id=611302 SubName: Full=Putative unch... 69 2e-10 tr|D5ZIW9|D5ZIW9_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 69 2e-10 tr|D5Z4Y0|D5Z4Y0_MYCTU Tax_Id=537209 SubName: Full=Putative unch... 69 2e-10 tr|D5YRR8|D5YRR8_MYCTU Tax_Id=515616 SubName: Full=Predicted pro... 69 2e-10 tr|D5YGU0|D5YGU0_MYCTU Tax_Id=520140 SubName: Full=Predicted pro... 69 2e-10 tr|D5Y4V0|D5Y4V0_MYCTU Tax_Id=520141 SubName: Full=Predicted pro... 69 2e-10 tr|D5XUM5|D5XUM5_MYCTU Tax_Id=515617 SubName: Full=Putative unch... 69 2e-10 tr|A4KIP2|A4KIP2_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 69 2e-10 tr|A2VJK9|A2VJK9_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 69 2e-10 sp|A4TB63|PUP_MYCGI Tax_Id=350054 (pup)RecName: Full=Prokaryotic... 68 3e-10 sp|B2HFV7|PUP_MYCMM Tax_Id=216594 (pup)RecName: Full=Prokaryotic... 67 9e-10 tr|D5P4S7|D5P4S7_9MYCO Tax_Id=525368 SubName: Full=Putative unch... 65 2e-09 sp|A0PQT4|PUP_MYCUA Tax_Id=362242 (pup)RecName: Full=Prokaryotic... 65 3e-09 sp|Q73YW7|PUP_MYCPA Tax_Id=1770 (pup)RecName: Full=Prokaryotic u... 64 5e-09 sp|A0QFB4|PUP_MYCA1 Tax_Id=243243 (pup)RecName: Full=Prokaryotic... 64 5e-09 sp|C1ASP8|PUP_RHOOB Tax_Id=632772 (pup)RecName: Full=Prokaryotic... 64 8e-09 sp|Q53078|PUP1_RHOER Tax_Id=1833 (pup1)RecName: Full=Prokaryotic... 64 8e-09 sp|Q5YUX1|PUP_NOCFA Tax_Id=37329 (pup)RecName: Full=Prokaryotic ... 63 1e-08 tr|C8XAQ5|C8XAQ5_NAKMY Tax_Id=479431 SubName: Full=Putative unch... 62 2e-08 tr|D5PLL6|D5PLL6_COREQ Tax_Id=525370 SubName: Full=Ubiquitin ana... 62 2e-08 sp|Q0SIF8|PUP_RHOSR Tax_Id=101510 (pup)RecName: Full=Prokaryotic... 61 4e-08 sp|C0ZZU8|PUP_RHOE4 Tax_Id=234621 (pup)RecName: Full=Prokaryotic... 59 2e-07 sp|Q53082|PUP2_RHOER Tax_Id=1833 (pup2)RecName: Full=Prokaryotic... 59 2e-07 tr|C3JTB8|C3JTB8_RHOER Tax_Id=596309 SubName: Full=Ubiquitin ana... 59 2e-07 sp|B1MAI1|PUP_MYCA9 Tax_Id=561007 (pup)RecName: Full=Prokaryotic... 58 4e-07 tr|D0LDT0|D0LDT0_GORB4 Tax_Id=526226 SubName: Full=Putative unch... 57 1e-06 tr|C6WID7|C6WID7_ACTMD Tax_Id=446462 SubName: Full=Putative unch... 57 1e-06 tr|D5UPL3|D5UPL3_TSUPA Tax_Id=521096 SubName: Full=Putative unch... 57 1e-06 sp|Q9ZBE0|PUP_MYCLE Tax_Id=1769 (pup)RecName: Full=Prokaryotic u... 56 1e-06 sp|B8ZRF2|PUP_MYCLB Tax_Id=561304 (pup)RecName: Full=Prokaryotic... 56 1e-06 tr|C7MWV8|C7MWV8_SACVD Tax_Id=471857 SubName: Full=Putative unch... 51 4e-05 >sp|A0QZ48|PUP_MYCS2 Tax_Id=246196 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium smegmatis] Length = 64 Score = 76.3 bits (186), Expect = 1e-12 Identities = 41/64 (64%), Positives = 41/64 (64%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDDDLPGASAAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLPGASAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A1TAP5|PUP_MYCVP Tax_Id=350058 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium vanbaalenii] Length = 64 Score = 70.9 bits (172), Expect = 5e-11 Identities = 38/64 (59%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDDDL G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLTGSTAAGQERREKLTDETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|O33246|PUP_MYCTU Tax_Id=1773 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium tuberculosis] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A5U4D7|PUP_MYCTA Tax_Id=419947 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium tuberculosis] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A1UHS8|PUP_MYCSK Tax_Id=189918 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium sp.] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 37/64 (57%), Positives = 38/64 (59%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDDDL G + AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLSGGAGAGQERREKLAEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A3Q194|PUP_MYCSJ Tax_Id=164757 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium sp.] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 37/64 (57%), Positives = 38/64 (59%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDDDL G + AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLSGGAGAGQERREKLAEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|C1AQ27|PUP_MYCBT Tax_Id=561275 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium bovis] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A1KKF4|PUP_MYCBP Tax_Id=410289 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium bovis] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q7TZ12|PUP_MYCBO Tax_Id=1765 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium bovis] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|C6DPV0|C6DPV0_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 71 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >tr|A5WP85|A5WP85_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D6G6N7|D6G6N7_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 71 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >tr|D6FWC5|D6FWC5_MYCTU Tax_Id=611304 SubName: Full=Predicted protein;[Mycobacterium tuberculosis K85] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D6FCP9|D6FCP9_MYCTU Tax_Id=611303 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis CPHL_A] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D6F5N8|D6F5N8_MYCTU Tax_Id=611302 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T46] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D5ZIW9|D5ZIW9_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D5Z4Y0|D5Z4Y0_MYCTU Tax_Id=537209 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis GM 1503] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D5YRR8|D5YRR8_MYCTU Tax_Id=515616 SubName: Full=Predicted protein;[Mycobacterium tuberculosis 02_1987] Length = 71 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >tr|D5YGU0|D5YGU0_MYCTU Tax_Id=520140 SubName: Full=Predicted protein;[Mycobacterium tuberculosis EAS054] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D5Y4V0|D5Y4V0_MYCTU Tax_Id=520141 SubName: Full=Predicted protein;[Mycobacterium tuberculosis T85] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D5XUM5|D5XUM5_MYCTU Tax_Id=515617 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T92] Length = 64 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|A4KIP2|A4KIP2_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 71 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >tr|A2VJK9|A2VJK9_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 71 Score = 68.9 bits (167), Expect = 2e-10 Identities = 36/64 (56%), Positives = 40/64 (62%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD+ G++AAGQERREK NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >sp|A4TB63|PUP_MYCGI Tax_Id=350054 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium gilvum] Length = 64 Score = 68.2 bits (165), Expect = 3e-10 Identities = 37/64 (57%), Positives = 39/64 (60%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDDD G++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDPTGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|B2HFV7|PUP_MYCMM Tax_Id=216594 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium marinum] Length = 64 Score = 66.6 bits (161), Expect = 9e-10 Identities = 35/64 (54%), Positives = 39/64 (60%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +D+D+ G +AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDEDVTGTTAAGQERREKLAQDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D5P4S7|D5P4S7_9MYCO Tax_Id=525368 SubName: Full=Putative uncharacterized protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 64 Score = 65.5 bits (158), Expect = 2e-09 Identities = 35/64 (54%), Positives = 38/64 (59%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DDD ++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDFADSTAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A0PQT4|PUP_MYCUA Tax_Id=362242 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium ulcerans] Length = 64 Score = 65.1 bits (157), Expect = 3e-09 Identities = 34/64 (53%), Positives = 39/64 (60%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +D+D+ G +AAGQERR+K NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDEDVTGTTAAGQERRKKLAQDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q73YW7|PUP_MYCPA Tax_Id=1770 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium paratuberculosis] Length = 64 Score = 64.3 bits (155), Expect = 5e-09 Identities = 34/64 (53%), Positives = 38/64 (59%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR ++DD ++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGDDEDDFASSTAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A0QFB4|PUP_MYCA1 Tax_Id=243243 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium avium] Length = 64 Score = 64.3 bits (155), Expect = 5e-09 Identities = 34/64 (53%), Positives = 38/64 (59%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR ++DD ++AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGDDEDDFASSTAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|C1ASP8|PUP_RHOOB Tax_Id=632772 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Rhodococcus opacus] Length = 64 Score = 63.5 bits (153), Expect = 8e-09 Identities = 36/64 (56%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDD G AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDDTPGGDGAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q53078|PUP1_RHOER Tax_Id=1833 (pup1)RecName: Full=Prokaryotic ubiquitin-like protein Pup 1; AltName: Full=Bacterial ubiquitin-like modifier 1;[Rhodococcus erythropolis] Length = 64 Score = 63.5 bits (153), Expect = 8e-09 Identities = 36/64 (56%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDD G AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDDTPGGDGAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q5YUX1|PUP_NOCFA Tax_Id=37329 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Nocardia farcinica] Length = 64 Score = 63.2 bits (152), Expect = 1e-08 Identities = 35/64 (54%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR ED+ G AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDEGSAGPEAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|C8XAQ5|C8XAQ5_NAKMY Tax_Id=479431 SubName: Full=Putative uncharacterized protein;[Nakamurella multipartita] Length = 64 Score = 62.0 bits (149), Expect = 2e-08 Identities = 34/64 (53%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQE+T R DDD GA AAGQERREK NAEDFVR+YVQ Sbjct: 1 MAQERTTRQGGGDGDDDAAGADAAGQERREKLAAETDDILDEIDDVLESNAEDFVRSYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D5PLL6|D5PLL6_COREQ Tax_Id=525370 SubName: Full=Ubiquitin analog Pup;[Rhodococcus equi ATCC 33707] Length = 64 Score = 62.0 bits (149), Expect = 2e-08 Identities = 35/64 (54%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DD G AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRAGGGDDDDAPIGEGAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q0SIF8|PUP_RHOSR Tax_Id=101510 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Rhodococcus sp.] Length = 64 Score = 61.2 bits (147), Expect = 4e-08 Identities = 35/64 (54%), Positives = 35/64 (54%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR EDD AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDDTPGADGAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|C0ZZU8|PUP_RHOE4 Tax_Id=234621 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Rhodococcus erythropolis] Length = 64 Score = 58.9 bits (141), Expect = 2e-07 Identities = 32/64 (50%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R +D+ G +AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTQRAGGGEDDETTGGDGSAGQERREKLAAETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q53082|PUP2_RHOER Tax_Id=1833 (pup2)RecName: Full=Prokaryotic ubiquitin-like protein Pup 2; AltName: Full=Bacterial ubiquitin-like modifier 2;[Rhodococcus erythropolis] Length = 64 Score = 58.9 bits (141), Expect = 2e-07 Identities = 32/64 (50%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R +D+ G +AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTQRAGGGEDDETTGGDGSAGQERREKLAAETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|C3JTB8|C3JTB8_RHOER Tax_Id=596309 SubName: Full=Ubiquitin analog Pup;[Rhodococcus erythropolis SK121] Length = 64 Score = 58.9 bits (141), Expect = 2e-07 Identities = 32/64 (50%), Positives = 36/64 (56%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R +D+ G +AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTQRAGGGEDDETTGGDGSAGQERREKLAAETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|B1MAI1|PUP_MYCA9 Tax_Id=561007 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium abscessus] Length = 64 Score = 57.8 bits (138), Expect = 4e-07 Identities = 33/64 (51%), Positives = 34/64 (53%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +DD AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGDDDDVTDLGGPAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D0LDT0|D0LDT0_GORB4 Tax_Id=526226 SubName: Full=Putative uncharacterized protein;[Gordonia bronchialis] Length = 63 Score = 56.6 bits (135), Expect = 1e-06 Identities = 34/64 (53%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR +D DL AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGD-DDGDLGPEGGAGQERREKLSEDTDDLLDEIDDVLEENAEDFVRAYVQ 59 Query: 61 KGGQ 64 KGGQ Sbjct: 60 KGGQ 63 >tr|C6WID7|C6WID7_ACTMD Tax_Id=446462 SubName: Full=Putative uncharacterized protein;[Actinosynnema mirum] Length = 64 Score = 56.6 bits (135), Expect = 1e-06 Identities = 32/64 (50%), Positives = 35/64 (54%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQ +R DD A+AAGQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQVQRQGGGDGDDGGDAAAAAGQERREKLGEDVDAILDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGG+ Sbjct: 61 KGGE 64 >tr|D5UPL3|D5UPL3_TSUPA Tax_Id=521096 SubName: Full=Putative uncharacterized protein;[Tsukamurella paurometabola DSM 20162] Length = 64 Score = 56.6 bits (135), Expect = 1e-06 Identities = 32/64 (50%), Positives = 33/64 (51%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQ KR EDD S AGQER EK NAEDFVRAYVQ Sbjct: 1 MAQEQVKRGGGGDEDDATGAPSGAGQERMEKLTDETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGG+ Sbjct: 61 KGGE 64 >sp|Q9ZBE0|PUP_MYCLE Tax_Id=1769 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium leprae] Length = 63 Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R +DD+ +++ GQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTRRGGGG-DDDEFTSSTSVGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 59 Query: 61 KGGQ 64 KGGQ Sbjct: 60 KGGQ 63 >sp|B8ZRF2|PUP_MYCLB Tax_Id=561304 (pup)RecName: Full=Prokaryotic ubiquitin-like protein Pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium leprae] Length = 63 Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R +DD+ +++ GQERREK NAEDFVRAYVQ Sbjct: 1 MAQEQTRRGGGG-DDDEFTSSTSVGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 59 Query: 61 KGGQ 64 KGGQ Sbjct: 60 KGGQ 63 >tr|C7MWV8|C7MWV8_SACVD Tax_Id=471857 SubName: Full=Putative uncharacterized protein;[Saccharomonospora viridis] Length = 63 Score = 51.2 bits (121), Expect = 4e-05 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 1 MAQEQTKRXXXXXEDDDLPGASAAGQERREKXXXXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQE+ ++ + DD+ A+ AGQERREK NAEDFVRAYVQ Sbjct: 1 MAQERIEKHGGG-DSDDVEAAAPAGQERREKVGEDVDTILDEIDDVLEENAEDFVRAYVQ 59 Query: 61 KGGQ 64 KGG+ Sbjct: 60 KGGE 63 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.306 0.124 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 295,284,855 Number of extensions: 4461136 Number of successful extensions: 1107 Number of sequences better than 10.0: 68 Number of HSP's gapped: 1058 Number of HSP's successfully gapped: 68 Length of query: 64 Length of database: 4,236,830,644 Length adjustment: 36 Effective length of query: 28 Effective length of database: 3,786,547,540 Effective search space: 106023331120 Effective search space used: 106023331120 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (22.0 bits) S2: 75 (33.5 bits)