BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_3935 (258 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0QZ86|A0QZ86_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 462 e-128 tr|B2HSE3|B2HSE3_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 334 7e-90 tr|Q1BD26|Q1BD26_MYCSS Tax_Id=164756 SubName: Full=Putative unch... 328 5e-88 tr|A3PVK1|A3PVK1_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 328 5e-88 tr|A1UBW7|A1UBW7_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 328 5e-88 tr|A0PLY3|A0PLY3_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 328 5e-88 tr|D5PDD1|D5PDD1_9MYCO Tax_Id=525368 SubName: Full=Putative unch... 309 2e-82 tr|D5PI99|D5PI99_9MYCO Tax_Id=525368 SubName: Full=Putative unch... 307 9e-82 tr|A1T4W1|A1T4W1_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 298 3e-79 tr|A4TEF6|A4TEF6_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 283 1e-74 tr|A4FCC1|A4FCC1_SACEN Tax_Id=405948 SubName: Full=Putative unch... 132 4e-29 tr|C6WFG0|C6WFG0_ACTMD Tax_Id=446462 SubName: Full=Putative unch... 111 1e-22 sp|O53624|Y0079_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 92 8e-17 tr|Q7U2W3|Q7U2W3_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 92 8e-17 tr|C6DQU3|C6DQU3_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 92 8e-17 tr|C1AJA5|C1AJA5_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 92 8e-17 tr|A5WID4|A5WID4_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 92 8e-17 tr|A5TYF2|A5TYF2_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 92 8e-17 tr|A1KEQ0|A1KEQ0_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 92 8e-17 tr|D6G8B2|D6G8B2_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 92 8e-17 tr|D6FVX9|D6FVX9_MYCTU Tax_Id=611304 SubName: Full=Putative unch... 92 8e-17 tr|D6FCD6|D6FCD6_MYCTU Tax_Id=611303 SubName: Full=Putative unch... 92 8e-17 tr|D6F016|D6F016_MYCTU Tax_Id=611302 SubName: Full=Putative unch... 92 8e-17 tr|D5ZBC1|D5ZBC1_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 92 8e-17 tr|D5YYT0|D5YYT0_MYCTU Tax_Id=515616 SubName: Full=Putative unch... 92 8e-17 tr|D5YMB1|D5YMB1_MYCTU Tax_Id=520140 SubName: Full=Putative unch... 92 8e-17 tr|D5YAS0|D5YAS0_MYCTU Tax_Id=520141 SubName: Full=Putative unch... 92 8e-17 tr|D5XPI2|D5XPI2_MYCTU Tax_Id=515617 SubName: Full=Putative unch... 92 8e-17 tr|A4KNA9|A4KNA9_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 92 8e-17 tr|A2VN15|A2VN15_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 92 8e-17 tr|D5Z9N3|D5Z9N3_MYCTU Tax_Id=537209 SubName: Full=Ribosome-asso... 91 1e-16 tr|Q5YYI6|Q5YYI6_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 91 2e-16 tr|B2HMA1|B2HMA1_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 81 1e-13 tr|A0PTW0|A0PTW0_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 58 1e-06 tr|Q1AVJ5|Q1AVJ5_RUBXD Tax_Id=266117 SubName: Full=Sigma 54 modu... 54 2e-05 tr|A3YVD7|A3YVD7_9SYNE Tax_Id=69042 SubName: Full=Light represse... 50 2e-04 tr|A7NNI5|A7NNI5_ROSCS Tax_Id=383372 SubName: Full=Sigma 54 modu... 50 3e-04 tr|A8IJQ7|A8IJQ7_AZOC5 Tax_Id=438753 SubName: Full=Sigma 54 modu... 49 5e-04 tr|Q063T8|Q063T8_9SYNE Tax_Id=313625 SubName: Full=Putative sigm... 49 8e-04 tr|Q3AZ51|Q3AZ51_SYNS9 Tax_Id=316279 SubName: Full=SSU ribosomal... 48 0.001 tr|D1ADY1|D1ADY1_THECD Tax_Id=471852 SubName: Full=Putative unch... 48 0.001 tr|A5UVY5|A5UVY5_ROSS1 Tax_Id=357808 SubName: Full=Sigma 54 modu... 48 0.001 tr|B6TYP8|B6TYP8_MAIZE Tax_Id=4577 SubName: Full=Plastid-specifi... 48 0.001 tr|D3PML2|D3PML2_MEIRD Tax_Id=504728 SubName: Full=Sigma 54 modu... 47 0.002 tr|Q3A379|Q3A379_PELCD Tax_Id=338963 SubName: Full=Sigma 54 modu... 47 0.002 >tr|A0QZ86|A0QZ86_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 258 Score = 462 bits (1189), Expect = e-128 Identities = 231/258 (89%), Positives = 231/258 (89%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV Sbjct: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 NGRQVRAQVEGVNAREAVD HWEARRGGVPAEAGREWRHESEPARR Sbjct: 61 NGRQVRAQVEGVNAREAVDRLEARLRSRLERIAEHWEARRGGVPAEAGREWRHESEPARR 120 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 PGYF KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT Sbjct: 121 PGYFPRPPEERRIIRRKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS Sbjct: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 Query: 241 VIYRRYDGHYGLITPADG 258 VIYRRYDGHYGLITPADG Sbjct: 241 VIYRRYDGHYGLITPADG 258 >tr|B2HSE3|B2HSE3_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 267 Score = 334 bits (856), Expect = 7e-90 Identities = 163/256 (63%), Positives = 190/256 (74%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DV+VS G+LPGAAEYAR KIG+L R AHRPVL ARVR+++H DPAV RPV+AQAN +V Sbjct: 11 IDVEVSARGDLPGAAEYARTKIGQLGRLAHRPVLSARVRISQHPDPAVSRPVVAQANFNV 70 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 +GR VRAQV G A+EA+D HWEARRG P EWRHESEP +R Sbjct: 71 DGRLVRAQVHGATAQEAIDRLDARLRRRLERVAEHWEARRGQQPDAGRAEWRHESEPRQR 130 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 YF KSF+M PCTVD+AA EM +LDYDFHLFTE+GTG A VLY+GGPT Sbjct: 131 DTYFPRPPEEREVIRRKSFTMAPCTVDDAATEMGLLDYDFHLFTEQGTGMAGVLYRGGPT 190 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 GYRL LV P AD+LSPFE P++IS HPAP LT+ +A ERLG+LGLPFLF+IDAA+GRA Sbjct: 191 GYRLALVAPATADQLSPFELPLSISPHPAPILTEAEAAERLGVLGLPFLFFIDAAQGRAG 250 Query: 241 VIYRRYDGHYGLITPA 256 V+Y RYDGHYGLITPA Sbjct: 251 VLYHRYDGHYGLITPA 266 >tr|Q1BD26|Q1BD26_MYCSS Tax_Id=164756 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 271 Score = 328 bits (840), Expect = 5e-88 Identities = 161/256 (62%), Positives = 184/256 (71%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DVDV+TDG+LPGA EYAR KIGRL R A RPVL ARVRLTR DPAVERPV+AQANLDV Sbjct: 15 LDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVERPVVAQANLDV 74 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 GR VRAQVEG A EA+D HWEARRGG+P EWRH+SEP R Sbjct: 75 EGRLVRAQVEGATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNEWRHQSEPEHR 134 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 PG+F KSF++ CTVDEA E+E+LDYDFHLFTEK TG+AAVLY+GG T Sbjct: 135 PGHFPRPADDRQVLRRKSFTLRACTVDEAVEELELLDYDFHLFTEKATGYAAVLYRGGET 194 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 GYR+ LV P +EL+PF+ P+TIS P CL AV+RL L G PFLF++DAAEGRA Sbjct: 195 GYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLFFVDAAEGRAC 254 Query: 241 VIYRRYDGHYGLITPA 256 V+Y RYDGHYGLITPA Sbjct: 255 VLYHRYDGHYGLITPA 270 >tr|A3PVK1|A3PVK1_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 271 Score = 328 bits (840), Expect = 5e-88 Identities = 161/256 (62%), Positives = 184/256 (71%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DVDV+TDG+LPGA EYAR KIGRL R A RPVL ARVRLTR DPAVERPV+AQANLDV Sbjct: 15 LDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVERPVVAQANLDV 74 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 GR VRAQVEG A EA+D HWEARRGG+P EWRH+SEP R Sbjct: 75 EGRLVRAQVEGATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNEWRHQSEPEHR 134 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 PG+F KSF++ CTVDEA E+E+LDYDFHLFTEK TG+AAVLY+GG T Sbjct: 135 PGHFPRPADDRQVLRRKSFTLRACTVDEAVEELELLDYDFHLFTEKATGYAAVLYRGGET 194 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 GYR+ LV P +EL+PF+ P+TIS P CL AV+RL L G PFLF++DAAEGRA Sbjct: 195 GYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLFFVDAAEGRAC 254 Query: 241 VIYRRYDGHYGLITPA 256 V+Y RYDGHYGLITPA Sbjct: 255 VLYHRYDGHYGLITPA 270 >tr|A1UBW7|A1UBW7_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 267 Score = 328 bits (840), Expect = 5e-88 Identities = 161/256 (62%), Positives = 184/256 (71%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DVDV+TDG+LPGA EYAR KIGRL R A RPVL ARVRLTR DPAVERPV+AQANLDV Sbjct: 11 LDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVERPVVAQANLDV 70 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 GR VRAQVEG A EA+D HWEARRGG+P EWRH+SEP R Sbjct: 71 EGRLVRAQVEGATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNEWRHQSEPEHR 130 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 PG+F KSF++ CTVDEA E+E+LDYDFHLFTEK TG+AAVLY+GG T Sbjct: 131 PGHFPRPADDRQVLRRKSFTLRACTVDEAVEELELLDYDFHLFTEKATGYAAVLYRGGET 190 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 GYR+ LV P +EL+PF+ P+TIS P CL AV+RL L G PFLF++DAAEGRA Sbjct: 191 GYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLFFVDAAEGRAC 250 Query: 241 VIYRRYDGHYGLITPA 256 V+Y RYDGHYGLITPA Sbjct: 251 VLYHRYDGHYGLITPA 266 >tr|A0PLY3|A0PLY3_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 270 Score = 328 bits (840), Expect = 5e-88 Identities = 162/259 (62%), Positives = 190/259 (73%), Gaps = 3/259 (1%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DV+VS G+LPGAAEYAR KIG++ R AHRPVL ARVR+++H DPAV RPV+AQAN +V Sbjct: 11 IDVEVSARGDLPGAAEYARTKIGQIGRLAHRPVLSARVRISQHPDPAVSRPVVAQANFNV 70 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 +GR VRAQV G A+EA+D HWEARRG P EWRHESEP +R Sbjct: 71 DGRLVRAQVHGATAQEAIDRLDARLRRRLERVAEHWEARRGQQPDAGRAEWRHESEPRQR 130 Query: 121 PGYFXXXXXXXXXXXX---KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKG 177 YF KSF+M PCTVD+AA EM +LDYDFHLFTE+GTG A VLY+G Sbjct: 131 DTYFPYFPRPPEEREVIRRKSFTMAPCTVDDAATEMGLLDYDFHLFTEQGTGMAGVLYRG 190 Query: 178 GPTGYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEG 237 GPTGYRL LV P AD+LSPFE P++IS HPAP LT+ +A ERLG+LGLPFLF+IDAA+G Sbjct: 191 GPTGYRLALVAPATADQLSPFELPLSISPHPAPILTEAEAAERLGVLGLPFLFFIDAAQG 250 Query: 238 RASVIYRRYDGHYGLITPA 256 RA V+Y RYDGHYGLITPA Sbjct: 251 RAGVLYHRYDGHYGLITPA 269 >tr|D5PDD1|D5PDD1_9MYCO Tax_Id=525368 SubName: Full=Putative uncharacterized protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 266 Score = 309 bits (791), Expect = 2e-82 Identities = 157/256 (61%), Positives = 183/256 (71%), Gaps = 1/256 (0%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DV V+ +LP AAEYAR+KIG L+R A RPVLHARVRLTRH DPAV+RPV+AQANLDV Sbjct: 11 IDVQVTPREDLPAAAEYARDKIGELTRHAGRPVLHARVRLTRHRDPAVQRPVVAQANLDV 70 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 +GR VRAQV+ AREAVD H EARRG PA G EWRHES+PARR Sbjct: 71 DGRPVRAQVQADTAREAVDLLAARLRRGLERAAEHREARRGEPPARPG-EWRHESQPARR 129 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 P YF KSF+M PCT+D+AA EME+LDYDFHLFTE+GTG A+VLY+ GPT Sbjct: 130 PHYFPRPADQRRVIRRKSFTMAPCTLDDAAREMELLDYDFHLFTEEGTGVASVLYRAGPT 189 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 G+RL L P AD +SP P+T+S P PCLT+ A +RL +LGLPFLF+I A G A Sbjct: 190 GHRLALAAPELADRVSPHALPVTVSRQPLPCLTEAGAADRLVMLGLPFLFFIHADYGCAG 249 Query: 241 VIYRRYDGHYGLITPA 256 V+Y RYDGHYGLITPA Sbjct: 250 VLYHRYDGHYGLITPA 265 >tr|D5PI99|D5PI99_9MYCO Tax_Id=525368 SubName: Full=Putative uncharacterized protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 267 Score = 307 bits (786), Expect = 9e-82 Identities = 152/256 (59%), Positives = 175/256 (68%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DV V+T G+LPGA +YAR KIG L H PVLHA VRL+ HGDPAV R VIAQANLDV Sbjct: 11 LDVQVTTHGQLPGADDYARTKIGELGHLTHEPVLHAHVRLSEHGDPAVARRVIAQANLDV 70 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 NGR VRAQVEGV AREA+D HWEA+RGGVP+ EWRHE+EP R Sbjct: 71 NGRPVRAQVEGVTAREAIDRLEARLRRQLERAAEHWEAKRGGVPSRGPHEWRHETEPTHR 130 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 P YF KS+S+ CTV+EAALEME LDYDFHLFTE+ T +V+Y+ GPT Sbjct: 131 PKYFPRPEGERRIMRHKSYSLPTCTVEEAALEMEQLDYDFHLFTEEATRQDSVIYREGPT 190 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 YRL P DEL+PF P+TIS PAP LT A+ER+GLLG PFLF++D R S Sbjct: 191 EYRLAQANPGATDELAPFRLPLTISPQPAPRLTVDQAIERIGLLGQPFLFFVDTGRDRGS 250 Query: 241 VIYRRYDGHYGLITPA 256 V+Y RYDGHYGLITPA Sbjct: 251 VLYHRYDGHYGLITPA 266 >tr|A1T4W1|A1T4W1_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein;[Mycobacterium vanbaalenii] Length = 264 Score = 298 bits (764), Expect = 3e-79 Identities = 149/256 (58%), Positives = 180/256 (70%), Gaps = 3/256 (1%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DV+V+T G+ PG AEYAR KIG L+R HRP+L ARVRLTR DPAVERPV+AQ NLDV Sbjct: 11 VDVEVTTHGDFPGIAEYARTKIGGLARIVHRPILRARVRLTRSHDPAVERPVVAQGNLDV 70 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 GR VRAQVE A+EA+D WEA RG EA WR+ EPAR Sbjct: 71 QGRPVRAQVEADTAQEAIDKLESRLRRRLEHLAERWEAPRG---PEAAPPWRNGEEPARA 127 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 P KSF+M PCT+D+A EME+LDYDFHLFTE G+ A V+Y+GGPT Sbjct: 128 PRSVTRSTGEPRIIRRKSFAMAPCTIDDAVAEMELLDYDFHLFTESGSETAGVVYRGGPT 187 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 GYR+ LV P ADE++P++ +TIS PAPCL ++DA+ER+ LLGLPFLF+IDAA+GRAS Sbjct: 188 GYRVALVAPAVADEVAPYQDSVTISPQPAPCLREQDALERMALLGLPFLFFIDAAQGRAS 247 Query: 241 VIYRRYDGHYGLITPA 256 ++YRRYDG YGLITPA Sbjct: 248 LLYRRYDGAYGLITPA 263 >tr|A4TEF6|A4TEF6_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein;[Mycobacterium gilvum] Length = 269 Score = 283 bits (724), Expect = 1e-74 Identities = 144/256 (56%), Positives = 175/256 (68%), Gaps = 3/256 (1%) Query: 1 MDVDVSTDGELPGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 +DVDV+T G+ PG AEYA+ KIG L+R A RPV +ARVRLTR DPAVERPVIAQANLDV Sbjct: 11 VDVDVTTHGDFPGIAEYAQSKIGGLTRLARRPVSYARVRLTRRHDPAVERPVIAQANLDV 70 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 GR VRAQVE A+EA+D W+ RG A WRH+ + R Sbjct: 71 GGRPVRAQVEAATAQEAIDTLESRLRRRLEHLHDRWDTPRG---PGAAPPWRHDDKAERE 127 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 F KS+SM PCTVD+A EME+LDYDFHLF EKG+G AAV+Y+ PT Sbjct: 128 IRSFGGTPREPRIIRRKSYSMAPCTVDDAVAEMELLDYDFHLFAEKGSGTAAVVYRSEPT 187 Query: 181 GYRLVLVIPVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRAS 240 GYR+ LV P A E++PF+ +TIS H PCL ++DA+ERL LGLPFLFY+DAA+GRAS Sbjct: 188 GYRIALVAPSLAGEVAPFQGLVTISPHAVPCLREQDALERLRRLGLPFLFYVDAAQGRAS 247 Query: 241 VIYRRYDGHYGLITPA 256 V+YRR+DG YG++TPA Sbjct: 248 VLYRRFDGDYGVLTPA 263 >tr|A4FCC1|A4FCC1_SACEN Tax_Id=405948 SubName: Full=Putative uncharacterized protein;[Saccharopolyspora erythraea] Length = 123 Score = 132 bits (332), Expect = 4e-29 Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 2/120 (1%) Query: 137 KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVLVIPVPADELS 196 K+F++ C VD+A +M+++DYDFHLFTE GTG +VLY+ P+G+RL V P P L+ Sbjct: 5 KTFALARCGVDDAEFDMDVMDYDFHLFTEVGTGQDSVLYRT-PSGFRLAQVEPDPG-HLA 62 Query: 197 PFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLITPA 256 P+T+S AP L+ +AVER+G + LPFLFY+D GR +++YRRYDGHYGLITP+ Sbjct: 63 EHALPVTVSEQRAPVLSTAEAVERMGAMDLPFLFYLDGERGRGALLYRRYDGHYGLITPS 122 >tr|C6WFG0|C6WFG0_ACTMD Tax_Id=446462 SubName: Full=Putative uncharacterized protein;[Actinosynnema mirum] Length = 235 Score = 111 bits (277), Expect = 1e-22 Identities = 81/219 (36%), Positives = 102/219 (46%), Gaps = 20/219 (9%) Query: 36 ARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXH 95 ARVRLT G + QAN +V G ++RAQV A A Sbjct: 35 ARVRLTALGGGTA----LLQANAEVRGHRIRAQVAAPEADVA----------GLLRERVA 80 Query: 96 WEARRGGVPAEAGREWRHESEPARRPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEM 155 + R P A R W P R P K C D AAL M++ Sbjct: 81 AQVSRLDAPG-AHRAW---PGPDRAP-VVTGRAGARRVARRKRVRAALCAPDAAALAMDL 135 Query: 156 LDYDFHLFTEKGTGFAAVLYKGGPTGYRLVLVIPVPADELSPFEKPITISTHPAPCLTQR 215 +DYDFHLF + TG +VLY+ GPTGYRL + L P P+T + HP P LT+ Sbjct: 136 MDYDFHLFADSETGQDSVLYRVGPTGYRLARLEDTAPPAL-PVVVPLTTNVHPVPELTEA 194 Query: 216 DAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLIT 254 +AV RL LPF F+ A R +V+YRR+DG YGL+T Sbjct: 195 EAVRRLDETELPFRFFRQAGTRRGAVLYRRWDGDYGLLT 233 >sp|O53624|Y0079_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv0079/MT0086;[Mycobacterium tuberculosis] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|Q7U2W3|Q7U2W3_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb0082;[Mycobacterium bovis] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|C6DQU3|C6DQU3_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDHLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|C1AJA5|C1AJA5_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|A5WID4|A5WID4_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|A5TYF2|A5TYF2_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|A1KEQ0|A1KEQ0_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_0112;[Mycobacterium bovis] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D6G8B2|D6G8B2_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDHLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D6FVX9|D6FVX9_MYCTU Tax_Id=611304 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis K85] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D6FCD6|D6FCD6_MYCTU Tax_Id=611303 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis CPHL_A] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D6F016|D6F016_MYCTU Tax_Id=611302 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T46] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D5ZBC1|D5ZBC1_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D5YYT0|D5YYT0_MYCTU Tax_Id=515616 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis 02_1987] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D5YMB1|D5YMB1_MYCTU Tax_Id=520140 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis EAS054] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D5YAS0|D5YAS0_MYCTU Tax_Id=520141 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T85] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D5XPI2|D5XPI2_MYCTU Tax_Id=515617 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T92] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|A4KNA9|A4KNA9_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|A2VN15|A2VN15_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 273 Score = 91.7 bits (226), Expect = 8e-17 Identities = 86/266 (32%), Positives = 113/266 (42%), Gaps = 37/266 (13%) Query: 2 DVDVSTDGELPGA-AEYAREKIGRLSRRAHRPVLH-ARVRLTRHGDPAVERPVIAQANLD 59 DV V + G + AE +GR+ A R V ARVRLT + P + Q NL Sbjct: 23 DVAVFSGGRANASQAERLARAVGRVL--ADRGVTGGARVRLTMAN--CADGPTLVQINLQ 78 Query: 60 VNGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPAR 119 V +RAQ A +D R A +W P R Sbjct: 79 VGDTPLRAQA----ATAGIDDLRPALI------------RLDRQIVRASAQWCPRPWPDR 122 Query: 120 RPGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGP 179 P K + T +A M+ +DYD HLFT+ TG AV+Y+ GP Sbjct: 123 -PRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGP 181 Query: 180 TGYRLVL---VIP-------VPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFL 229 +G RL V P PA P+ +++ P P LT+ AV+R GLPFL Sbjct: 182 SGLRLARQHHVFPPGWSRCRAPAGP----PVPLIVNSRPTPVLTEAAAVDRAREHGLPFL 237 Query: 230 FYIDAAEGRASVIYRRYDGHYGLITP 255 F+ D A GR ++Y RYDG+ GLITP Sbjct: 238 FFTDQATGRGQLLYSRYDGNLGLITP 263 >tr|D5Z9N3|D5Z9N3_MYCTU Tax_Id=537209 SubName: Full=Ribosome-associated protein Y;[Mycobacterium tuberculosis GM 1503] Length = 194 Score = 90.9 bits (224), Expect = 1e-16 Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 14/118 (11%) Query: 148 EAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVL---VIP-------VPADELSP 197 +A M+ +DYD HLFT+ TG AV+Y+ GP+G RL V P PA Sbjct: 71 QAIAAMDAMDYDVHLFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGP--- 127 Query: 198 FEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLITP 255 P+ +++ P P LT+ AV+R GLPFLF+ D A GR ++Y RYDG+ GLITP Sbjct: 128 -PVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITP 184 >tr|Q5YYI6|Q5YYI6_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 258 Score = 90.5 bits (223), Expect = 2e-16 Identities = 80/263 (30%), Positives = 111/263 (42%), Gaps = 32/263 (12%) Query: 2 DVDVSTDGEL-PGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDV 60 D+ V+T G++ P A IGR+ RR H L ARVR+T D +RP + QAN+ + Sbjct: 20 DLAVTTRGDVAPADVTRAVRAIGRVLRRHHLD-LPARVRITAPADR--DRPNVVQANVRL 76 Query: 61 NGRQVRAQVEGVNAREAVDXXXXXXXXXXXXXXXHWEARRGGVPAEAGREWRHESEPARR 120 R QV G + + + A GREW +PAR Sbjct: 77 PHTPARVQVTGPRGFAVT------------FAVERLDRQLTRLAARRGREW---PDPARP 121 Query: 121 PGYFXXXXXXXXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPT 180 P K +++ T EA M+ +DYD HLFT+ TG A++ P Sbjct: 122 P--LAEAGPARPIVRRKRCALLIGTPAEAVEMMDAMDYDAHLFTDSDTGEDALVSWAEPR 179 Query: 181 GYRLVLVIPVPADELSPFEKP-------ITISTHPAPCLTQRDAVERLGLLGLPFLFYID 233 RL D P P + + PAP LT+ +A L GLP LF+ D Sbjct: 180 AVRLTR----QCDTTVPARTPRVGEALAVHVRPEPAPVLTESEAAAHLCRHGLPHLFFTD 235 Query: 234 AAEGRASVIYRRYDGHYGLITPA 256 R ++YRRYDG ++ PA Sbjct: 236 VRTHRGRLLYRRYDGDLTIVVPA 258 >tr|B2HMA1|B2HMA1_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 267 Score = 81.3 bits (199), Expect = 1e-13 Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 11/122 (9%) Query: 144 CTVDEAALE-MEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVLVIPV--------PADE 194 C+ AA+ M+ +DYD H+FT+ TG AV+Y+ GP+G RL V P++ Sbjct: 145 CSTPLAAVAVMDAMDYDAHVFTDAETGEDAVVYRAGPSGLRLARQRHVYPPGWAWSPSNS 204 Query: 195 LSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLIT 254 P P+ +++ P LT+ +A+ R GL LF+ D+A GR ++Y RYDG GL+ Sbjct: 205 APPV--PLIVNSRPTLALTEEEALRRAREHGLQLLFFTDSATGRGQLLYPRYDGDLGLVG 262 Query: 255 PA 256 PA Sbjct: 263 PA 264 >tr|A0PTW0|A0PTW0_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 248 Score = 58.2 bits (139), Expect = 1e-06 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 9/103 (8%) Query: 144 CTVDEAALE-MEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVL---VIPVPADELSPFE 199 C+ AA+ M+ +DYD H+FT+ TG AV+Y+ GP+G RL V P P SP Sbjct: 145 CSTPLAAVAVMDAMDYDAHVFTDAETGEDAVVYRAGPSGLRLARQRHVYP-PGWAWSPSN 203 Query: 200 KP----ITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGR 238 + +++ P LT+ +A+ R GL LF+ D+A GR Sbjct: 204 SAPPVLLIVNSRPTLALTEEEALRRAREHGLQLLFFTDSATGR 246 >tr|Q1AVJ5|Q1AVJ5_RUBXD Tax_Id=266117 SubName: Full=Sigma 54 modulation protein / SSU ribosomal protein S30P;[Rubrobacter xylanophilus] Length = 189 Score = 53.9 bits (128), Expect = 2e-05 Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 12/174 (6%) Query: 17 YAREKIGRLSR--RAHRPVLHARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEGVNA 74 YA EK+ R+ + R V A V L +P++ +A+ L +NG ++A Sbjct: 19 YAVEKVERVRKFFDDDRSVARAEVELIHERNPSIAASEVAETTLFINGAVLKA------- 71 Query: 75 REAVDXXXXXXXXXXXXXXXHWEARRGG-VPAEAGREWRHESEPARRPGYFXXXXXXXXX 133 REA + + RG V GR HE A + Sbjct: 72 REASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGRLKNHEGARAEPQPFVAEEEEDIEP 131 Query: 134 XXX--KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLV 185 K F M P + +EA L+ME+LD+DF +FT TG V+Y+ Y L+ Sbjct: 132 RIVRTKQFQMKPMSAEEAVLQMELLDHDFFVFTNADTGDINVVYRRRDGNYGLI 185 Score = 40.0 bits (92), Expect = 0.28 Identities = 19/45 (42%), Positives = 29/45 (64%) Query: 212 LTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLITPA 256 ++ +AV ++ LL F + +A G +V+YRR DG+YGLI PA Sbjct: 144 MSAEEAVLQMELLDHDFFVFTNADTGDINVVYRRRDGNYGLIEPA 188 >tr|A3YVD7|A3YVD7_9SYNE Tax_Id=69042 SubName: Full=Light repressed protein A-like protein;[Synechococcus sp. WH 5701] Length = 195 Score = 50.4 bits (119), Expect = 2e-04 Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 5/178 (2%) Query: 12 PGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEG 71 P +Y K+GR V A V L+ +P V + A+ + NG +RAQ Sbjct: 14 PAIRDYTEAKLGRAINHYEGLVKEADVHLSVARNPRVAQQT-AEVTVFANGVVIRAQERS 72 Query: 72 VNAREAVDXXXXXXXXXXXXXXXHWEARRG-GVPAEAGREWRHESEPARRPGYFXXXXXX 130 N ++D G G PA G + S P Sbjct: 73 ENLYASIDMVAGKLSRQLRRYKDRLSNHHGAGSPANVGDDTEQPSLEGVLPNDLIGDREP 132 Query: 131 XXXXXX---KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLV 185 K FSM ++D+A ++E++D+DF++F E+ +G V+Y+ G+ ++ Sbjct: 133 ALPVPAVRRKYFSMPAMSLDQALHQLELIDHDFYVFREESSGGLQVVYRRNHGGFGVI 190 >tr|A7NNI5|A7NNI5_ROSCS Tax_Id=383372 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Roseiflexus castenholzii] Length = 198 Score = 49.7 bits (117), Expect = 3e-04 Identities = 25/67 (37%), Positives = 36/67 (53%) Query: 189 PVPADELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDG 248 P P DE + + + +AVE++ LLG F + DA G+ +V+YRR DG Sbjct: 128 PAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQDADTGKLNVLYRRQDG 187 Query: 249 HYGLITP 255 +YGLI P Sbjct: 188 NYGLIVP 194 Score = 37.0 bits (84), Expect = 2.3 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 9/96 (9%) Query: 95 HWEA----RRGGVPAEAGREWRHESEPARRPGYFXXXXXXXXXXXXKSFSMVPCTVDEAA 150 HW R+GG EA E A P K F + P DEA Sbjct: 103 HWRRGRLRRQGGQIVEALPEMN-----AAAPAPIDEEEQRPRIVRTKEFQVKPMYSDEAV 157 Query: 151 LEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVL 186 +ME+L + F +F + TG VLY+ Y L++ Sbjct: 158 EQMELLGHSFFIFQDADTGKLNVLYRRQDGNYGLIV 193 >tr|A8IJQ7|A8IJQ7_AZOC5 Tax_Id=438753 SubName: Full=Sigma 54 modulation protein;[Azorhizobium caulinodans] Length = 198 Score = 49.3 bits (116), Expect = 5e-04 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 201 PITISTHPA--PCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLITPA 256 P ++ HP L+ RDAV L + G P + + A GR SV+YRR DGH G I P+ Sbjct: 133 PTVVAEHPTRLKTLSVRDAVVELEVTGAPVVVFRHAGHGRVSVVYRRADGHVGWIDPS 190 >tr|Q063T8|Q063T8_9SYNE Tax_Id=313625 SubName: Full=Putative sigma 54 modulation protein/ribosomal protein S30EA;[Synechococcus sp. BL107] Length = 195 Score = 48.5 bits (114), Expect = 8e-04 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 14/183 (7%) Query: 12 PGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEG 71 P EY K+ R + + A V L+ +P V + A+ + NG +RAQ Sbjct: 14 PALREYTNTKLERATSHFGDAIREADVHLSVARNPRVPQQT-AEVTVFANGTVIRAQERS 72 Query: 72 VNAREAVDXXXXXXXXXXXXXXXHWEARRG------GVPAEAGREWRHESEPARRPGYFX 125 N ++D W+ R G A S+ + G Sbjct: 73 ENLYASIDLVVGKLARQLRK----WKERHADHHHSHGHSASLTPSTEEVSDESVVEGSLV 128 Query: 126 XXXXXXXXXXX---KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGY 182 K FSM P T+D+A +++++D+DF+LF + TG V+Y+ GY Sbjct: 129 DGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKDSATGALQVIYRRNHGGY 188 Query: 183 RLV 185 ++ Sbjct: 189 GVI 191 Score = 36.2 bits (82), Expect = 4.0 Identities = 19/48 (39%), Positives = 26/48 (54%) Query: 210 PCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLITPAD 257 P +T DA +L ++ F + D+A G VIYRR G YG+I D Sbjct: 148 PPMTLDDARHQLDVIDHDFYLFKDSATGALQVIYRRNHGGYGVIQARD 195 >tr|Q3AZ51|Q3AZ51_SYNS9 Tax_Id=316279 SubName: Full=SSU ribosomal protein S30P / sigma 54 modulation protein;[Synechococcus sp.] Length = 195 Score = 48.1 bits (113), Expect = 0.001 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 14/183 (7%) Query: 12 PGAAEYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEG 71 P EY K+ R + + A V L+ +P V + A+ + NG +RAQ Sbjct: 14 PALREYTNTKLERATSHFGDAIREADVHLSVARNPRVPQQT-AEVTVFANGTVIRAQERS 72 Query: 72 VNAREAVDXXXXXXXXXXXXXXXHWEARRG------GVPAEAGREWRHESEPARRPGYFX 125 N ++D W+ R G A S+ + G Sbjct: 73 ENLYASIDLVVGKLARQLRK----WKERHADHHHSHGHSASLTPSTEEVSDESAVEGSLV 128 Query: 126 XXXXXXXXXXX---KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGY 182 K FSM P T+D+A +++++D+DF+LF + TG V+Y+ GY Sbjct: 129 DGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRDSKTGDLQVIYRRNHGGY 188 Query: 183 RLV 185 ++ Sbjct: 189 GVI 191 >tr|D1ADY1|D1ADY1_THECD Tax_Id=471852 SubName: Full=Putative uncharacterized protein;[Thermomonospora curvata] Length = 123 Score = 48.1 bits (113), Expect = 0.001 Identities = 29/85 (34%), Positives = 38/85 (44%) Query: 16 EYAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEGVNAR 75 E ARE R+ A PVL +V L+ DPA + P +A +D+NGR V A Sbjct: 25 ERAREVFTRVLAHAPEPVLAVQVTLSVLTDPAAKNPSMASIRVDLNGRPVNAHAAAPAMG 84 Query: 76 EAVDXXXXXXXXXXXXXXXHWEARR 100 +A+ HWEARR Sbjct: 85 QAIAMTGDRLRIRLERMARHWEARR 109 >tr|A5UVY5|A5UVY5_ROSS1 Tax_Id=357808 SubName: Full=Sigma 54 modulation protein / SSU ribosomal protein S30P;[Roseiflexus sp.] Length = 193 Score = 48.1 bits (113), Expect = 0.001 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 186 LVIPVPADELSPFEKPITISTHPAPC--LTQRDAVERLGLLGLPFLFYIDAAEGRASVIY 243 L P AD E+P + T + +AVE++ LLG F + DA G+ +V+Y Sbjct: 118 LAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQDADTGKLNVLY 177 Query: 244 RRYDGHYGLITP 255 RR DG+YGLI P Sbjct: 178 RRQDGNYGLIVP 189 Score = 37.0 bits (84), Expect = 2.3 Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 137 KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVL 186 K F + P DEA +ME+L ++F +F + TG VLY+ Y L++ Sbjct: 139 KEFQVKPMYSDEAVEQMELLGHNFFIFQDADTGKLNVLYRRQDGNYGLIV 188 >tr|B6TYP8|B6TYP8_MAIZE Tax_Id=4577 SubName: Full=Plastid-specific 30S ribosomal protein 1;[Zea mays] Length = 309 Score = 48.1 bits (113), Expect = 0.001 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 11/76 (14%) Query: 137 KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVL---------- 186 K F M P TV+EA ++E +D+DF+ F ++ TG +LY+ GY L++ Sbjct: 222 KVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQVNILYRRKEGGYGLIIPKNDGKVDTV 281 Query: 187 -VIPVPADELSPFEKP 201 V+P PA P +P Sbjct: 282 GVVPPPAVAAEPEPEP 297 Score = 42.4 bits (98), Expect = 0.056 Identities = 22/63 (34%), Positives = 34/63 (53%) Query: 193 DELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGL 252 DE + K + P LT +A+E+L + F + D A G+ +++YRR +G YGL Sbjct: 210 DEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQVNILYRRKEGGYGL 269 Query: 253 ITP 255 I P Sbjct: 270 IIP 272 >tr|D3PML2|D3PML2_MEIRD Tax_Id=504728 SubName: Full=Sigma 54 modulation protein/ribosomal protein S30EA;[Meiothermus ruber] Length = 183 Score = 47.4 bits (111), Expect = 0.002 Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 21/175 (12%) Query: 17 YAREKIGRLSRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEGVNARE 76 Y +K+ RL R V A+V L+ P +ER A+ ++V G VR + + Sbjct: 20 YLDKKMARLDRYFDNNV-EAKVVLSMAQGPRIERKAKAEIQVNVPGGIVRVEEADPDMYA 78 Query: 77 AVDXXXXXXXXXXXXXXX-HWEARRGGVP-----AEAGREWRHESEPARRPGYFXXXXXX 130 A+D H++ R VP A E E+EP Sbjct: 79 AIDRSIDRLEYQLKRYKERHFQRARHAVPEAVLAGSAHLETEEEAEPR------------ 126 Query: 131 XXXXXXKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLV 185 K F M P T ++AA EME L +DF +F T V+Y+ Y L+ Sbjct: 127 --IVRTKRFHMKPMTPEDAAFEMEALGHDFFVFRNADTEQINVIYRRRDGNYGLI 179 Score = 38.1 bits (87), Expect = 1.0 Identities = 19/44 (43%), Positives = 26/44 (59%) Query: 212 LTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLITP 255 +T DA + LG F + +A + +VIYRR DG+YGLI P Sbjct: 138 MTPEDAAFEMEALGHDFFVFRNADTEQINVIYRRRDGNYGLIEP 181 >tr|Q3A379|Q3A379_PELCD Tax_Id=338963 SubName: Full=Sigma 54 modulation protein / SSU ribosomal protein S30P;[Pelobacter carbinolicus] Length = 182 Score = 47.0 bits (110), Expect = 0.002 Identities = 26/63 (41%), Positives = 35/63 (55%) Query: 193 DELSPFEKPITISTHPAPCLTQRDAVERLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGL 252 DE SP I + L+ +AV ++ LL FL + DA+ SV+YRR DG+YGL Sbjct: 117 DEGSPEPVVIRSQSFSVKPLSVEEAVMQMDLLNKTFLVFSDASTNEISVVYRRKDGNYGL 176 Query: 253 ITP 255 I P Sbjct: 177 IVP 179 Score = 37.4 bits (85), Expect = 1.8 Identities = 16/50 (32%), Positives = 33/50 (66%) Query: 137 KSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLYKGGPTGYRLVL 186 +SFS+ P +V+EA ++M++L+ F +F++ T +V+Y+ Y L++ Sbjct: 129 QSFSVKPLSVEEAVMQMDLLNKTFLVFSDASTNEISVVYRRKDGNYGLIV 178 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.320 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,056,087,889 Number of extensions: 78671013 Number of successful extensions: 156215 Number of sequences better than 10.0: 970 Number of HSP's gapped: 156877 Number of HSP's successfully gapped: 1346 Length of query: 258 Length of database: 4,236,830,644 Length adjustment: 135 Effective length of query: 123 Effective length of database: 2,548,269,004 Effective search space: 313437087492 Effective search space used: 313437087492 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 79 (35.0 bits)