BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_4033
         (217 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0QZI1|A0QZI1_MYCS2 Tax_Id=246196 SubName: Full=TetR-family p...   396   e-109
tr|A0QZT4|A0QZT4_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   169   2e-40
tr|D6M460|D6M460_9ACTO Tax_Id=465543 SubName: Full=TetR-family t...   117   7e-25
tr|B5HS18|B5HS18_9ACTO Tax_Id=463191 SubName: Full=Putative unch...   112   2e-23
tr|C1XP57|C1XP57_9DEIN Tax_Id=526227 SubName: Full=Transcription...    67   1e-09
tr|B5ZNP5|B5ZNP5_RHILW Tax_Id=395492 SubName: Full=Transcription...    67   2e-09
tr|B7A6U7|B7A6U7_THEAQ Tax_Id=498848 SubName: Full=Transcription...    61   1e-07
tr|Q9RUI4|Q9RUI4_DEIRA Tax_Id=1299 SubName: Full=Transcriptional...    60   2e-07
tr|C1D0Z2|C1D0Z2_DEIDV Tax_Id=546414 SubName: Full=Putative tran...    60   2e-07
tr|B9J8G1|B9J8G1_AGRRK Tax_Id=311403 SubName: Full=Transcription...    60   2e-07
tr|Q1MM37|Q1MM37_RHIL3 Tax_Id=216596 SubName: Full=Putative TetR...    60   2e-07
tr|C6AZ98|C6AZ98_RHILS Tax_Id=395491 SubName: Full=Transcription...    60   2e-07
tr|Q5FP84|Q5FP84_GLUOX Tax_Id=442 SubName: Full=Putative transcr...    59   4e-07
tr|Q07R20|Q07R20_RHOP5 Tax_Id=316055 SubName: Full=Transcription...    59   4e-07
tr|D3PKW5|D3PKW5_MEIRD Tax_Id=504728 SubName: Full=Transcription...    59   4e-07
tr|C1AZV4|C1AZV4_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...    59   4e-07
tr|D2M675|D2M675_RHOPA Tax_Id=652103 SubName: Full=Transcription...    59   5e-07
tr|A3WX70|A3WX70_9BRAD Tax_Id=314253 SubName: Full=Transcription...    58   7e-07
tr|Q0S3N9|Q0S3N9_RHOSR Tax_Id=101510 SubName: Full=Transcription...    57   1e-06
tr|D2S8N7|D2S8N7_GEOOG Tax_Id=526225 SubName: Full=Transcription...    57   2e-06
tr|D2MFZ1|D2MFZ1_RHOPA Tax_Id=652103 SubName: Full=Transcription...    57   2e-06
tr|B5H3W3|B5H3W3_STRCL Tax_Id=443255 SubName: Full=Regulatory pr...    57   2e-06
tr|D1C9D5|D1C9D5_SPHTD Tax_Id=479434 SubName: Full=Transcription...    56   3e-06
tr|D6ARH3|D6ARH3_STRFL Tax_Id=457431 SubName: Full=TetR-family t...    56   3e-06
tr|Q72GE5|Q72GE5_THET2 Tax_Id=262724 (tetR)SubName: Full=Transcr...    56   3e-06
tr|Q6N3A3|Q6N3A3_RHOPA Tax_Id=1076 SubName: Full=Probable transc...    56   3e-06
tr|B3QHH5|B3QHH5_RHOPT Tax_Id=395960 SubName: Full=Transcription...    56   3e-06
tr|A5EM94|A5EM94_BRASB Tax_Id=288000 SubName: Full=Transcription...    56   3e-06
tr|B5G986|B5G986_9ACTO Tax_Id=465543 SubName: Full=TetR-family t...    56   3e-06
tr|Q89II3|Q89II3_BRAJA Tax_Id=375 SubName: Full=Transcriptional ...    55   4e-06
tr|Q5SM42|Q5SM42_THET8 Tax_Id=300852 SubName: Full=Transcription...    55   4e-06
tr|D1BFC0|D1BFC0_SANKS Tax_Id=446469 SubName: Full=Transcription...    55   4e-06
tr|B1W0H2|B1W0H2_STRGG Tax_Id=455632 SubName: Full=Putative TetR...    55   6e-06
tr|A4YS01|A4YS01_BRASO Tax_Id=114615 SubName: Full=Putative tran...    55   6e-06
tr|D6AWV5|D6AWV5_9ACTO Tax_Id=457425 SubName: Full=TetR-family t...    55   6e-06
tr|D1X2P6|D1X2P6_9ACTO Tax_Id=649189 SubName: Full=Transcription...    55   6e-06
tr|B4V3D8|B4V3D8_9ACTO Tax_Id=465541 SubName: Full=TetR-family t...    55   6e-06
tr|A7HTN3|A7HTN3_PARL1 Tax_Id=402881 SubName: Full=Transcription...    55   8e-06
tr|D6KB76|D6KB76_9ACTO Tax_Id=645465 SubName: Full=Transcription...    55   8e-06
tr|D1SZV3|D1SZV3_9BURK Tax_Id=643561 SubName: Full=Transcription...    55   8e-06
tr|B9C4N1|B9C4N1_9BURK Tax_Id=513053 SubName: Full=Transcription...    55   8e-06
tr|B9BKM5|B9BKM5_9BURK Tax_Id=513052 SubName: Full=Transcription...    55   8e-06
tr|B9B211|B9B211_9BURK Tax_Id=513051 SubName: Full=Transcription...    55   8e-06
tr|B1M520|B1M520_METRJ Tax_Id=426355 SubName: Full=Transcription...    54   1e-05
tr|C9NJ46|C9NJ46_9ACTO Tax_Id=591167 SubName: Full=Transcription...    54   1e-05

>tr|A0QZI1|A0QZI1_MYCS2 Tax_Id=246196 SubName: Full=TetR-family
           protein transcriptional regulator;[Mycobacterium
           smegmatis]
          Length = 217

 Score =  396 bits (1018), Expect = e-109
 Identities = 205/217 (94%), Positives = 205/217 (94%)

Query: 1   MAMEPECSDEVTGRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIA 60
           MAMEPECSDEVTGRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIA
Sbjct: 1   MAMEPECSDEVTGRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIA 60

Query: 61  ERSGLSRSTVFTHFPRKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAAS 120
           ERSGLSRSTVFTHFPRKTLILEEWM            VDGVAGRPLRDVLGAYLDTLAAS
Sbjct: 61  ERSGLSRSTVFTHFPRKTLILEEWMRRRRDEARRSARVDGVAGRPLRDVLGAYLDTLAAS 120

Query: 121 NSAAREEMCALVPPALLHTTMLVDHPIGLDFAALIVESEAALKPSVQPEQVGRLLAAGYV 180
           NSAAREEMCALVPPALLHTTMLVDHPIGLDFAALIVESEAALKPSVQPEQVGRLLAAGYV
Sbjct: 121 NSAAREEMCALVPPALLHTTMLVDHPIGLDFAALIVESEAALKPSVQPEQVGRLLAAGYV 180

Query: 181 SAMSQWIQEEPPTSDLGAELRALLDLVLSGAQRDISE 217
           SAMSQWIQEEPPTSDLGAELRALLDLVLSGAQRDISE
Sbjct: 181 SAMSQWIQEEPPTSDLGAELRALLDLVLSGAQRDISE 217


>tr|A0QZT4|A0QZT4_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           repressor, TetR family protein, putative;[Mycobacterium
           smegmatis]
          Length = 208

 Score =  169 bits (428), Expect = 2e-40
 Identities = 90/187 (48%), Positives = 119/187 (63%)

Query: 25  TRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEW 84
           T RA KR ER DRV+ AAIALFV++GFE T+MDDIA RSGLSR+TVF HFPRK   LEEW
Sbjct: 13  TLRARKRNERRDRVFAAAIALFVEKGFEETTMDDIAARSGLSRTTVFNHFPRKVHFLEEW 72

Query: 85  MXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPALLHTTMLVD 144
                          G+AG+P+ +VL +Y+  LA  +     E  AL    L ++ +L D
Sbjct: 73  TLRRRLRASQTFEPAGLAGQPVDEVLRSYMIALAEVSLETPAETRALQSATLEYSALLFD 132

Query: 145 HPIGLDFAALIVESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDLGAELRALL 204
           HP+  D A ++  + A L+P+  P+QVGRLLA GY +A+ +W++ +PP  DL  EL AL 
Sbjct: 133 HPLARDLADVVAVTGATLRPTASPDQVGRLLALGYFAAVLRWVEHDPPQFDLKDELVALA 192

Query: 205 DLVLSGA 211
             VL+GA
Sbjct: 193 HTVLNGA 199


>tr|D6M460|D6M460_9ACTO Tax_Id=465543 SubName: Full=TetR-family
           transcriptional regulator;[Streptomyces sp. SPB74]
          Length = 233

 Score =  117 bits (294), Expect = 7e-25
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 2/202 (0%)

Query: 15  TRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHF 74
           T R     G  RR  +R  R   +YE A+ LFV+RG+  T+M+DIA+R+ ++R+TVF HF
Sbjct: 12  TARPEPGAGGGRRERQRRRRRSELYEVALGLFVERGYAGTTMEDIADRADVARATVFNHF 71

Query: 75  PRKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPP 134
           PRK + L+EW                 A   LR VL  Y   L   +  AR+   A++  
Sbjct: 72  PRKAVFLQEWARRRRAVALEAAYRSDAADSSLRAVLLRYFGELGKVSEDARDASVAMLTG 131

Query: 135 ALLHTTMLVDHPIGLDFAALIVES--EAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPP 192
           ++  T +    P+  + A ++  S  E+ ++P V  E++GRLL+  Y   +  W+ E+P 
Sbjct: 132 SVHATDIWRKSPLAAELAGIVSRSTAESGVEPRVDAERLGRLLSGAYFLILITWVTEDPA 191

Query: 193 TSDLGAELRALLDLVLSGAQRD 214
             D+  E+  ++D VL GA  D
Sbjct: 192 PFDITDEVTKMVDTVLYGALPD 213


>tr|B5HS18|B5HS18_9ACTO Tax_Id=463191 SubName: Full=Putative
           uncharacterized protein;[Streptomyces sviceus ATCC
           29083]
          Length = 206

 Score =  112 bits (281), Expect = 2e-23
 Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 2/191 (1%)

Query: 26  RRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWM 85
           RR  KR +  D++Y AA+ LFV +G+E T+MD IAE + ++R+TVF HF +K   LEEW 
Sbjct: 9   RRERKRQQARDQLYAAALHLFVTQGYEATTMDQIAETADVARATVFNHFSQKVGFLEEWG 68

Query: 86  XXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPALLHTTMLVDH 145
                              P+ D L  YL  +A  N A+R E   L+  +  + ++L D 
Sbjct: 69  VRRRARVNEILGSQHAEDLPVGDRLRRYLKAMADLNVASRAETTVLMDASARYGSLLQDR 128

Query: 146 PIGLDFAALIVE--SEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDLGAELRAL 203
            +  + A ++ +      ++  V  +Q G+LLAA Y S + +WI+EEP   DL   +   
Sbjct: 129 SLENELARIVEQGRQRGEIRAGVDRDQAGQLLAACYFSTILRWIREEPAPFDLHERIAGA 188

Query: 204 LDLVLSGAQRD 214
           LD++L G   D
Sbjct: 189 LDIILLGLLAD 199


>tr|C1XP57|C1XP57_9DEIN Tax_Id=526227 SubName: Full=Transcriptional
           regulator, TetR family;[Meiothermus silvanus DSM 9946]
          Length = 198

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 10/196 (5%)

Query: 24  PTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEE 83
           P  R  ++  R +R+Y  A+ LF +RGF  T+  DIA+ + +SR T F ++P K  +L +
Sbjct: 2   PGLRERQKQRRRERIYRTAVQLFRERGFHQTTATDIAKAAHVSRGTFFNYYPYKEAVLLD 61

Query: 84  WMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALV-----PPALLH 138
           +              +   G P  DVL    + L+  +   RE +  L      P     
Sbjct: 62  YGAELLTQLSEQARAELEEGSPPLDVLRRMWERLSEVSERERELLSPLAYELLNPDPERA 121

Query: 139 TTMLVDHPIGLDFAALI---VESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSD 195
            +     P+G DF A +   +     L+  +  E++ R LA  Y+ +  +W     P   
Sbjct: 122 RSAFEALPLG-DFVAEVLRPLREAGELRKDLSLERIARSLADTYLLSALRW-SAYTPERR 179

Query: 196 LGAELRALLDLVLSGA 211
           L  E+   LDLVL GA
Sbjct: 180 LKDEMLKFLDLVLEGA 195


>tr|B5ZNP5|B5ZNP5_RHILW Tax_Id=395492 SubName: Full=Transcriptional
           regulator, TetR family;[Rhizobium leguminosarum bv.
           trifolii]
          Length = 210

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)

Query: 17  RRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPR 76
           +R A EG  RR  KR +  +R+ +AA++LF+ RGFE T+++DI E + +S+ + F +FP 
Sbjct: 5   KRAATEG--RRDRKRRQTRERIEQAAMSLFLQRGFEATTVEDITEAADVSKRSFFDYFPS 62

Query: 77  KTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPAL 136
           K  ++  W                VA RP  + L A ++    +   A  +   L    L
Sbjct: 63  KEEVVFAWQ-----DSFADRLTAAVAARPAEEPLVAVVEAAITATVIASIDERGLALAEL 117

Query: 137 LHTTMLVDHPIGLDFAALIVESEAAL----KPSVQPEQVGRLLAAGYVSAM---SQWIQE 189
           +H T  +     L +A +  +   AL    +   Q     R+LAA  + A+   ++  Q+
Sbjct: 118 IHRTPALRARDQLKYARVEQKLAEALLLRKRNDPQERSRMRILAAVVIGALRVGAELWQQ 177

Query: 190 EPP---TSDLGAELRALLDLVLS 209
            PP     D  AE+ A L  +L+
Sbjct: 178 RPPGAAPQDFAAEIFAELWSILA 200


>tr|B7A6U7|B7A6U7_THEAQ Tax_Id=498848 SubName: Full=Transcriptional
           regulator, TetR family;[Thermus aquaticus Y51MC23]
          Length = 197

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 8/191 (4%)

Query: 27  RALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWMX 86
           R  ++  R +R+++AA+ALF  RGF+ T+  DIA+ + +SR T F +FP K  +L E+  
Sbjct: 4   REYQKKRRRERIFQAAMALFRQRGFQETAASDIAKAAHVSRGTFFNYFPYKEAVLLEYGA 63

Query: 87  XXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALV-----PPALLHTTM 141
                           G     +L      +A    A ++ +  L+     P  +     
Sbjct: 64  LLLAGLREEVKGRLARGEDPLAILRFIFQEVARYTEAEKDLVLPLLYELLNPDPIRAKAA 123

Query: 142 LVDHPIGLDFAALI--VESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDLGAE 199
               P+G   A ++  +  +  ++  +  E++GR LA  Y     +W     P  DL  E
Sbjct: 124 FEALPLGDLIAQVLRPLREKDLVRKDLSLERMGRTLADLYFLTALRW-AAYTPERDLKEE 182

Query: 200 LRALLDLVLSG 210
           L+  LDL L G
Sbjct: 183 LQKTLDLALLG 193


>tr|Q9RUI4|Q9RUI4_DEIRA Tax_Id=1299 SubName: Full=Transcriptional
           repressor, TetR family;[Deinococcus radiodurans]
          Length = 208

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 55/200 (27%), Positives = 81/200 (40%), Gaps = 20/200 (10%)

Query: 27  RALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWMX 86
           R  ++  R  R+Y  AI LF   GF+ T+  DIA  S +SR T F ++P K  +L ++  
Sbjct: 11  RERQKERRRARIYNVAIDLFKQGGFQGTTATDIARASNVSRGTFFNYYPYKEAVLLDYGS 70

Query: 87  XXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPALLHTTMLVDHP 146
                           G P   VL    DTLA  N+  R+    L PP            
Sbjct: 71  EVMERLRDLAEQRLAQGVPAMSVLYEIWDTLADENARERD----LFPPLAYEVMNPNPER 126

Query: 147 IGLDFAAL----IVE-------SEAALKPSVQPEQVGRLLAAGYVSAMSQW--IQEEPPT 193
               + AL    +VE        E  ++  +  +++  L+A  Y+    +W     E P 
Sbjct: 127 ARTAYQALPLSKVVELVLRPLHQEGQIRTDLSLQRISNLIADTYLMVALRWSAYGTERPL 186

Query: 194 SDLGAELRALLDLVLSGAQR 213
            D   E+R  L L+L GA R
Sbjct: 187 KD---EMRLALGLLLEGALR 203


>tr|C1D0Z2|C1D0Z2_DEIDV Tax_Id=546414 SubName: Full=Putative
           transcriptional regulator, tetR family;[Deinococcus
           deserti]
          Length = 205

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 17/202 (8%)

Query: 27  RALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWMX 86
           R  ++  R  R+Y  AI LF   GF+TT+  DIA  S +SR T F ++P K  +L ++  
Sbjct: 7   RERQKERRRARIYSVAIELFKRGGFQTTTATDIARASNVSRGTFFNYYPYKEAVLLDYGS 66

Query: 87  XXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPALLHT------- 139
                         + G P   VL    D LA  NS  R+    L PP            
Sbjct: 67  EVMDRLRDHAEQRLLDGVPPLSVLYEVWDLLAEENSRERD----LFPPLAYEVMNPNPER 122

Query: 140 --TMLVDHPIG--LDFAALIVESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSD 195
             T     P+   ++     +     ++P +  +++  L+A  Y+    +W         
Sbjct: 123 ARTAYQALPLSKVIELILRPLHQSGQMRPDLSLQRISNLIADTYLMVALRW-SAYGTERT 181

Query: 196 LGAELRALLDLVLSGA-QRDIS 216
           L  E+R  L+L+L GA +RD S
Sbjct: 182 LQEEMRLALNLLLEGALKRDSS 203


>tr|B9J8G1|B9J8G1_AGRRK Tax_Id=311403 SubName: Full=Transcriptional
           regulator protein;[Agrobacterium radiobacter]
          Length = 217

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 6/138 (4%)

Query: 26  RRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWM 85
           RR  KR +  +R+  AA+ALF++RGF+ T+++DI E + +S+ + F +FP K  ++  W 
Sbjct: 15  RRERKRRQTRERIEAAALALFLERGFDGTTIEDITEAADVSKRSFFDYFPSKEEVVFAWQ 74

Query: 86  XXXXXXXXXXXXVDGVAGRPLRDVLGAYLD-TLAASNSAAREEMCALVPPALLHTTMLVD 144
                        D VA +P    + A ++  L ++  AA  +  +L   AL+H T ++ 
Sbjct: 75  -----DNFADELADAVAAQPKDASIVAVIEGALTSALLAAMADPQSLAIGALIHDTPVLS 129

Query: 145 HPIGLDFAALIVESEAAL 162
               L +A L  +   AL
Sbjct: 130 ARHQLKYAKLETKLTDAL 147


>tr|Q1MM37|Q1MM37_RHIL3 Tax_Id=216596 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhizobium
           leguminosarum bv. viciae]
          Length = 211

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 18/188 (9%)

Query: 16  RRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFP 75
           +R    EG  RR  KR +  +R+ +AA+ LF+ RGFE T+++DI E + +S+ + F +FP
Sbjct: 5   KRTETTEG--RRERKRRQTRERIEQAAMTLFLQRGFEATTIEDITEAADVSKRSFFDYFP 62

Query: 76  RKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPA 135
            K  ++  W             +  VA RP  +   A ++    +   A  +   L    
Sbjct: 63  SKEEVVFAWQ-----DAFADRLMAAVAARPAGESSVAAVEAAITATVIASVDEPGLARGD 117

Query: 136 LLHTTMLVDHPIGLDFAALIVESEAAL------KPSVQPEQVGRLLAAGYVSAM---SQW 186
           L+H T  +     L +A L  +   AL       P  +P    R+LAA  + A+   ++ 
Sbjct: 118 LIHRTPALKARDQLKYAKLEQKLAEALLLRKAGDPLERPRM--RVLAAIVIGALRVGAEL 175

Query: 187 IQEEPPTS 194
            Q+ PP++
Sbjct: 176 WQQRPPSA 183


>tr|C6AZ98|C6AZ98_RHILS Tax_Id=395491 SubName: Full=Transcriptional
           regulator, TetR family;[Rhizobium leguminosarum bv.
           trifolii]
          Length = 211

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 18/190 (9%)

Query: 16  RRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFP 75
           +R    EG  RR  KR +  +R+  AA++LF+ RGFE T+++DI E + +S+ + F +FP
Sbjct: 5   KRTETTEG--RRERKRRQTRERIEHAAMSLFLQRGFEGTTIEDITEAADVSKRSFFDYFP 62

Query: 76  RKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPA 135
            K  ++  W             +  VA RP  +   A ++    +   A  +   L    
Sbjct: 63  SKEEVVFAWQ-----DAFADRLMAAVAARPAAESSVAAVEAAITATVIAAVDEPGLALGE 117

Query: 136 LLHTTMLVDHPIGLDFAALIVESEAAL------KPSVQPEQVGRLLAAGYVSAM---SQW 186
           L+H T  +     L +A L  +   AL       P  +P    R+LAA  + A+   ++ 
Sbjct: 118 LIHRTPALKARDQLKYARLEQKLAEALLLRKGGDPLERPRM--RVLAAVVIGALRVGAEL 175

Query: 187 IQEEPPTSDL 196
            Q+ PP + L
Sbjct: 176 WQQRPPGASL 185


>tr|Q5FP84|Q5FP84_GLUOX Tax_Id=442 SubName: Full=Putative
           transcriptional regulator;[Gluconobacter oxydans]
          Length = 209

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 9/187 (4%)

Query: 21  REGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLI 80
           ++GP R+  K+   H  +   A+ LF   G+E TS+D+IAE + +SR T+F +FP K  I
Sbjct: 7   QDGPLRQR-KKDRTHAALVREAMRLFSTYGYEETSVDEIAEAAQISRRTLFRYFPGKADI 65

Query: 81  LEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALV-----PPA 135
           +  W              D     PL+D + A L  + A  S+ R +  A+V      PA
Sbjct: 66  ILAWTGSVTTILTEAIR-DVPLDVPLQDAVLAGLVPVVACYSSDRMDAYAVVRLVEGTPA 124

Query: 136 LLHTTMLVDHPIGLDFA-ALIVESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTS 194
           L    +          A ALI    A   PS+    + R   A + +A+ +W++ E   S
Sbjct: 125 LRDMALRRYSEWEETLANALIARLPATEMPSLVARLLARTAIATFRTALDEWMKTE-GKS 183

Query: 195 DLGAELR 201
           DL A LR
Sbjct: 184 DLEAILR 190


>tr|Q07R20|Q07R20_RHOP5 Tax_Id=316055 SubName: Full=Transcriptional
           regulator, TetR family; Flags:
           Precursor;[Rhodopseudomonas palustris]
          Length = 258

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/93 (31%), Positives = 48/93 (51%)

Query: 24  PTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEE 83
           P++RA K AER   + +A +  FV RG+  T +DD+A+R+G+++ T++ HF  K  + +E
Sbjct: 58  PSKRAAKAAERRAAIVDAGLREFVARGYAATRLDDVAKRAGVAKGTIYLHFKDKEALFQE 117

Query: 84  WMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDT 116
            +                 G   R VL  + DT
Sbjct: 118 LIRSALVPVVSRLASPPAPGESARAVLERFADT 150


>tr|D3PKW5|D3PKW5_MEIRD Tax_Id=504728 SubName: Full=Transcriptional
           regulator, TetR family;[Meiothermus ruber]
          Length = 211

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 8/194 (4%)

Query: 25  TRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEW 84
           T R  ++  R DR++  AI LF ++GF  T+  DIA+ S +SR T F ++  K  +L ++
Sbjct: 3   TLRERQKQRRRDRIFRTAINLFREKGFHQTTATDIAKASHVSRGTFFNYYSYKEAVLLDF 62

Query: 85  MXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALV-----PPALLHT 139
                         +   G P  +VL    + LA  +   R  +  L      P      
Sbjct: 63  GAQLLNELREQALSELAQGEPPLEVLRRLWNRLAEVSERERVLLSPLAYELLNPDPQRAK 122

Query: 140 TMLVDHPIGLDFAALI--VESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDLG 197
                 P+G   A ++  + ++  L+  +  E++ R +A  Y+ +  +W     P   L 
Sbjct: 123 AAFEALPLGDLIAEILHPLRTQGRLRQDMSLERISRSIADVYLLSALRW-AAYTPGRQLK 181

Query: 198 AELRALLDLVLSGA 211
            E+   LDL+L GA
Sbjct: 182 DEMNKFLDLMLEGA 195


>tr|C1AZV4|C1AZV4_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 205

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 15/181 (8%)

Query: 20  AREGPTRRALKR-AERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKT 78
           +R  P+ R  +R +   DR+    I LF ++GF+ TS+D++AE SG++R T+F +FP K 
Sbjct: 3   SRRKPSSRIGRRPSTTQDRISTVGIELFTEQGFDATSVDEVAEASGIARRTLFRYFPSKN 62

Query: 79  LI--------LEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCA 130
            I        L E              VDG+    L+    A+ ++  A++   R+ M  
Sbjct: 63  AIPWGDFDAHLAEMRAQLAAQPGDIPIVDGLTAALLQ--FNAFPESEEANH---RKRMGL 117

Query: 131 LVPPALLHTTMLVDHPIGLDFAALIVESEAALKPSVQ-PEQVGRLLAAGYVSAMSQWIQE 189
           ++    L    +V +    +  A  V     + P+   P  VG LL    +SA  QW+ +
Sbjct: 118 ILRVPALQAYSVVMYEGWRNVIAEYVAGRLGVSPTDHVPRTVGYLLLGVAMSAYEQWLDD 177

Query: 190 E 190
           +
Sbjct: 178 D 178


>tr|D2M675|D2M675_RHOPA Tax_Id=652103 SubName: Full=Transcriptional
           regulator, TetR family;[Rhodopseudomonas palustris DX-1]
          Length = 203

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/101 (32%), Positives = 54/101 (53%)

Query: 14  RTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTH 73
           +T++ V+ +    R  KR E   R+ +AA+ LF+++GF+ T++D+IAE +G+SR T F +
Sbjct: 5   QTKQDVSEKPEGLRERKRRETLQRISDAALELFLNKGFDATTLDEIAEAAGISRRTFFYY 64

Query: 74  FPRKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYL 114
           F  K  IL  ++                AG P+  V  A L
Sbjct: 65  FASKDDILTAYLGRRTDELRAAVLQSSSAGEPIDVVCNALL 105


>tr|A3WX70|A3WX70_9BRAD Tax_Id=314253 SubName: Full=Transcriptional
           regulatory protein;[Nitrobacter sp. Nb-311A]
          Length = 240

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/112 (27%), Positives = 52/112 (46%)

Query: 5   PECSDEVTGRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSG 64
           P  S      T +     GP  RA + A+R   +  A +  F  RGF  T +DD+A+R+G
Sbjct: 21  PAASRAGAATTAQTGGTAGPQNRAARAAQRRAAIVAAGLDEFTARGFAATRLDDVAKRAG 80

Query: 65  LSRSTVFTHFPRKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDT 116
           +++ T++ HF  K  + +E +                AG  +R+VL  + +T
Sbjct: 81  VAKGTIYLHFKDKEALFQELVRTALVPLIGNLMTTLAAGGSVREVLERFAET 132


>tr|Q0S3N9|Q0S3N9_RHOSR Tax_Id=101510 SubName: Full=Transcriptional
           regulator, AcrR family protein;[Rhodococcus sp.]
          Length = 207

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 20  AREGPTRRALKR-AERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKT 78
           +R  P+ R  +R +   DR+    I LF ++GF+ TS+D++AE SG++R T+F +FP K 
Sbjct: 3   SRRKPSSRIGRRPSTTQDRISTVGIELFTEQGFDATSVDEVAEASGIARRTLFRYFPSKN 62

Query: 79  LI--------LEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCA 130
            I        L E              VDG+    L+     +    A+     R+ M  
Sbjct: 63  AIPWGDFDAHLAEMRAQLAAQPDDIPIVDGLTAALLQ-----FNAFPASEEINHRKRMGL 117

Query: 131 LVPPALLHTTMLVDHPIGLDFAALIVESEAALKPSVQ-PEQVGRLLAAGYVSAMSQWIQE 189
           ++    L    +V +    +  A  V S     P+   P  VG LL    +SA  QW+ +
Sbjct: 118 ILRVPALQAYSVVMYEGWRNVIAEYVASRLGTSPTDHVPRTVGYLLLGVAMSAYEQWLDD 177

Query: 190 E 190
           +
Sbjct: 178 D 178


>tr|D2S8N7|D2S8N7_GEOOG Tax_Id=526225 SubName: Full=Transcriptional
           regulator, TetR family;[Geodermatophilus obscurus]
          Length = 280

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)

Query: 4   EPECSDEVTGRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERS 63
           EPE      GR  RR  R GP  R  +R +    + EAA  LF +RGF+  S+ +IA+R+
Sbjct: 56  EPE--QPARGRRGRRALR-GPGLRERRRQQTRGTIIEAAAELFAERGFDAVSVMEIAQRA 112

Query: 64  GLSRSTVFTHFPRK 77
           G+   TVF HFP K
Sbjct: 113 GVVEKTVFNHFPVK 126


>tr|D2MFZ1|D2MFZ1_RHOPA Tax_Id=652103 SubName: Full=Transcriptional
           regulator, TetR family; Flags:
           Precursor;[Rhodopseudomonas palustris DX-1]
          Length = 238

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/104 (28%), Positives = 50/104 (48%)

Query: 22  EGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLIL 81
           E  + RA K AER   + EAA+  F  RGF  T +DD+A+R+G+++ T++ HF  K  + 
Sbjct: 36  EALSTRAAKAAERRAAIIEAALDEFTARGFAATRIDDVAKRAGVAKGTIYLHFTDKEAMF 95

Query: 82  EEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAR 125
           +E +                +G   R +L  + +T     +  R
Sbjct: 96  QELVRTALVPTMQRLTAQPASGVSARQLLETFAETFVREVAQTR 139


>tr|B5H3W3|B5H3W3_STRCL Tax_Id=443255 SubName: Full=Regulatory
          protein; Flags: Fragment;[Streptomyces clavuligerus
          ATCC 27064]
          Length = 182

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/67 (41%), Positives = 40/67 (59%)

Query: 11 VTGRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTV 70
          +T   R R A  GP+  A  R    + + EAA  LF++RGFE T++DDI  R+G+ R + 
Sbjct: 4  MTQPRRARKAAPGPSADAAARVPMREALAEAAFQLFLERGFERTTVDDIVARAGVGRRSF 63

Query: 71 FTHFPRK 77
          F +FP K
Sbjct: 64 FRYFPSK 70


>tr|D1C9D5|D1C9D5_SPHTD Tax_Id=479434 SubName: Full=Transcriptional
           regulator, TetR family;[Sphaerobacter thermophilus]
          Length = 210

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 15/192 (7%)

Query: 25  TRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLI---- 80
           TR   +   R +R+ EAA+A+F  RG+   +MD+IA  SG S+  V+ HFP K  I    
Sbjct: 2   TREQARSEVRRERILEAALAIFARRGYRDAAMDEIAAASGTSKGGVYFHFPNKQAIFLSL 61

Query: 81  LEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMC-ALVPPALLHT 139
           L+                +  +   +   L   LDT +   S AR  +  AL      +T
Sbjct: 62  LDRMAALLMTRAEAAIAAETDSLAKMDAALRVVLDTFSGHRSLARLFLVDALGAGREFNT 121

Query: 140 TMLVDHPIGLDFAALIVE--SEAALKPSVQP--EQVGRLLAAGYVS-AMSQWI--QEEPP 192
            ML  H    +FA LI     E   +  + P   +V  L+  G ++  ++ W+   + PP
Sbjct: 122 KMLEIH---REFAGLIARHLDEGIRRGDIAPVDTRVAGLVWFGAINEVVTDWLLDPDPPP 178

Query: 193 TSDLGAELRALL 204
                  LRALL
Sbjct: 179 LESYYPTLRALL 190


>tr|D6ARH3|D6ARH3_STRFL Tax_Id=457431 SubName: Full=TetR-family
          transcriptional regulator;[Streptomyces roseosporus
          NRRL 15998]
          Length = 203

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%)

Query: 23 GPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILE 82
          G TRR   R     R+YEAA+ L  ++GF  T++D+IAER+G+++ TV+ +F  KT + E
Sbjct: 5  GTTRRQATR----QRLYEAAVTLIAEKGFSATTVDEIAERAGVAKGTVYYNFKSKTELFE 60

Query: 83 E 83
          E
Sbjct: 61 E 61


>tr|Q72GE5|Q72GE5_THET2 Tax_Id=262724 (tetR)SubName:
           Full=Transcriptional regulator, tetR family;[Thermus
           thermophilus]
          Length = 205

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 10/192 (5%)

Query: 27  RALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWMX 86
           R  ++  R +R++ AA+ LF +RGF+ T+  +IA+ + +SR T F ++P K  +L ++  
Sbjct: 4   REYQKKRRRERIFRAAMELFRNRGFQETTATEIAKAAHVSRGTFFNYYPYKEAVLLDYGS 63

Query: 87  XXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMC------ALVPPALLHTT 140
                           GR   +VL  YL  + A  +A  +++        L P       
Sbjct: 64  QLLAGLREEVRRLLAQGREPVEVL-HYLFRVLAEGTAREKDLLLPMFYELLNPDPARARA 122

Query: 141 MLVDHPIGLDFAALI--VESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDLGA 198
                P+G   A ++  +  +  L+     E++GR LA  Y  +  +W     P  DL  
Sbjct: 123 AFEALPLGDLIAEILKPLREQGVLRQDFSLERMGRTLADLYFLSALRW-AAYTPGRDLAE 181

Query: 199 ELRALLDLVLSG 210
           EL   L L+L G
Sbjct: 182 ELEKNLRLLLEG 193


>tr|Q6N3A3|Q6N3A3_RHOPA Tax_Id=1076 SubName: Full=Probable
           transcriptional regulator, TetR family; Flags:
           Precursor;[Rhodopseudomonas palustris]
          Length = 238

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 47/94 (50%)

Query: 22  EGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLIL 81
           E  + RA K AER   + EAA+  F  RGF  T +DD+A+R+G+++ T++ HF  K  + 
Sbjct: 36  EAISTRAAKAAERRAAIIEAALDEFTARGFAATRIDDVAKRAGVAKGTIYLHFTDKEAMF 95

Query: 82  EEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLD 115
           +E +                 G   R +L A+ D
Sbjct: 96  QELVRTALVPTMQRLTAQPSPGVSARQMLEAFAD 129


>tr|B3QHH5|B3QHH5_RHOPT Tax_Id=395960 SubName: Full=Transcriptional
           regulator, TetR family; Flags:
           Precursor;[Rhodopseudomonas palustris]
          Length = 238

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 47/94 (50%)

Query: 22  EGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLIL 81
           E  + RA K AER   + EAA+  F  RGF  T +DD+A+R+G+++ T++ HF  K  + 
Sbjct: 36  EAISTRAAKAAERRAAIIEAALDEFTARGFAATRIDDVAKRAGVAKGTIYLHFTDKEAMF 95

Query: 82  EEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLD 115
           +E +                 G   R +L A+ D
Sbjct: 96  QELVRTALVPTMQRLTAQPSPGVSARQMLEAFAD 129


>tr|A5EM94|A5EM94_BRASB Tax_Id=288000 SubName: Full=Transcriptional
           regulator, TetR family;[Bradyrhizobium sp.]
          Length = 219

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/99 (31%), Positives = 49/99 (49%)

Query: 14  RTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTH 73
           + R R A      RA + AER   + +AA+  F+ RGF  T +DDIA R+G+++ T++ H
Sbjct: 9   KRRGRAAGGSAASRADRAAERRAAIVQAAMDEFIARGFAATRLDDIARRAGVAKGTIYLH 68

Query: 74  FPRKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGA 112
           F  K  + EE +                 G  +RD++ A
Sbjct: 69  FKDKESMFEELIRTAIVPFVSRLTTPPAPGGSVRDMVEA 107


>tr|B5G986|B5G986_9ACTO Tax_Id=465543 SubName: Full=TetR-family
          transcriptional regulator;[Streptomyces sp. SPB74]
          Length = 198

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)

Query: 20 AREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFP--RK 77
          A  GP RR  K+A     + +AA+ LF++RG+E  S+ ++AE + +S +TVF HFP  ++
Sbjct: 6  ASPGPGRRERKKAATRQAIADAALRLFLERGYEQVSVREVAEEADVSPTTVFKHFPGGKE 65

Query: 78 TLILEE 83
          TL+ ++
Sbjct: 66 TLVFDQ 71


>tr|Q89II3|Q89II3_BRAJA Tax_Id=375 SubName: Full=Transcriptional
          regulatory protein;[Bradyrhizobium japonicum]
          Length = 226

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/59 (42%), Positives = 38/59 (64%)

Query: 25 TRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEE 83
          + RA + AER   + EAA+  F+ RGF  T +DDIA R+G+++ T++ HF  K  + EE
Sbjct: 27 SNRATRAAERRAAIVEAAMEEFIARGFAATRLDDIARRAGVAKGTIYLHFKDKESMFEE 85


>tr|Q5SM42|Q5SM42_THET8 Tax_Id=300852 SubName: Full=Transcriptional
           repressor, TetR family;[Thermus thermophilus]
          Length = 205

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 8/191 (4%)

Query: 27  RALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWMX 86
           R  ++  R +R++ AA+ LF +RGF+ T+  +IA+ + +SR T F ++P K  +L ++  
Sbjct: 4   REYQKKRRRERIFRAAMELFRNRGFQETTATEIAKAAHVSRGTFFNYYPYKEAVLLDYGS 63

Query: 87  XXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMC-----ALVPPALLHTTM 141
                           GR   +VL      LA   +  ++ +       L P  +     
Sbjct: 64  QLLAGLREEVRRLLAQGREPVEVLRHLFRVLAEGTAREKDLLLPMFYELLNPDPVRARAA 123

Query: 142 LVDHPIGLDFAALI--VESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDLGAE 199
               P+G   A ++  +  +  L+     E++GR LA  Y  +  +W     P  DL  E
Sbjct: 124 FEALPLGDLIAEILKPLREQGVLRQDFSLERMGRTLADLYFLSALRW-AAYTPGRDLAEE 182

Query: 200 LRALLDLVLSG 210
           L   L L+L G
Sbjct: 183 LEKNLRLLLEG 193


>tr|D1BFC0|D1BFC0_SANKS Tax_Id=446469 SubName: Full=Transcriptional
           regulator, TetR family;[Sanguibacter keddieii]
          Length = 223

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 55/214 (25%), Positives = 85/214 (39%), Gaps = 21/214 (9%)

Query: 13  GRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFT 72
           G+T    A+    R   K      ++ EAA+ LF + G+ + S+ +IA R G+S   +  
Sbjct: 11  GQTVSESAQPPRERGYAKGRATRVQIVEAAMVLFGEVGYRSASLREIASRVGISHPGLIH 70

Query: 73  HFPRKTLILEEWMXXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALV 132
           HFP K ++L   +             D  +G  L D +           ++ R  +  L 
Sbjct: 71  HFPTKEVLLAAVLEHRDEMDDSELSADLASGTGLMDAV-----VRLVRRNSERPGIVELF 125

Query: 133 PPALLHTTMLVDHPIGLDF-------AALI------VESEAALKPSVQPEQVGRLLAAGY 179
                  T   DHP    F        AL+      + ++ AL+PSV+P    R L A  
Sbjct: 126 TTLAAEAT-APDHPAHQYFRERYATTLALLTRELETLRADGALRPSVEPAAAARALTALM 184

Query: 180 VSAMSQWIQEEPPTS--DLGAELRALLDLVLSGA 211
                QW+ E       D+ A +R  LDL + GA
Sbjct: 185 DGLQVQWLLERGADDQVDMAAVMRDALDLYVVGA 218


>tr|B1W0H2|B1W0H2_STRGG Tax_Id=455632 SubName: Full=Putative
          TetR-family transcriptional regulator;[Streptomyces
          griseus subsp. griseus]
          Length = 203

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 4/61 (6%)

Query: 23 GPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILE 82
          G TRR   R     ++YEAA+ L  ++GF  T++D+IAER+G+++ TV+ +F  KT + E
Sbjct: 5  GTTRRQATR----QKLYEAAVTLIAEKGFSATTVDEIAERAGVAKGTVYYNFKSKTELFE 60

Query: 83 E 83
          E
Sbjct: 61 E 61


>tr|A4YS01|A4YS01_BRASO Tax_Id=114615 SubName: Full=Putative
          transcriptional regulatory protein, TetR
          family;[Bradyrhizobium sp.]
          Length = 204

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/59 (42%), Positives = 40/59 (67%)

Query: 25 TRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEE 83
          +RRA + AER   + +AA+  F+ RGF  T +DDIA+R+G+++ T++ HF  K  + EE
Sbjct: 5  SRRADRAAERRAAIVQAAMDEFIARGFAATRLDDIAKRAGVAKGTIYLHFKDKESMFEE 63


>tr|D6AWV5|D6AWV5_9ACTO Tax_Id=457425 SubName: Full=TetR-family
          transcriptional regulator;[Streptomyces albus J1074]
          Length = 206

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/54 (40%), Positives = 39/54 (72%)

Query: 30 KRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEE 83
          +R     ++YEAA+ L  ++GF  T++D+IAER+G+++ TV+ +F  KT++ EE
Sbjct: 6  RRQATRQKLYEAAVTLIAEQGFSATTVDEIAERAGVAKGTVYYNFASKTVLFEE 59


>tr|D1X2P6|D1X2P6_9ACTO Tax_Id=649189 SubName:
          Full=Transcriptional regulator, TetR
          family;[Streptomyces sp. ACT-1]
          Length = 222

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 4/61 (6%)

Query: 23 GPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILE 82
          G TRR   R     ++YEAA+ L  ++GF  T++D+IAER+G+++ TV+ +F  KT + E
Sbjct: 24 GTTRRQATR----QKLYEAAVTLIAEKGFSATTVDEIAERAGVAKGTVYYNFKSKTELFE 79

Query: 83 E 83
          E
Sbjct: 80 E 80


>tr|B4V3D8|B4V3D8_9ACTO Tax_Id=465541 SubName: Full=TetR-family
          transcriptional regulator;[Streptomyces sp. Mg1]
          Length = 215

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 14/82 (17%)

Query: 2  AMEPECSDEVTGRTRRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAE 61
          AME   +   TG  RR+  R+              ++YEAA+ L  ++GF  T++D+IAE
Sbjct: 5  AMESSSTGTGTGSGRRQATRQ--------------KLYEAAVTLIAEQGFSATTVDEIAE 50

Query: 62 RSGLSRSTVFTHFPRKTLILEE 83
          R+G+++ TV+ +F  KT + EE
Sbjct: 51 RAGVAKGTVYYNFASKTDLFEE 72


>tr|A7HTN3|A7HTN3_PARL1 Tax_Id=402881 SubName: Full=Transcriptional
           regulator, TetR family;[Parvibaculum lavamentivorans]
          Length = 215

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 6/199 (3%)

Query: 16  RRRVAREGPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFP 75
           R+  A + P RRA K+      +Y  A+ LF +  ++  +++DI   +G++++T F HF 
Sbjct: 10  RKADAADAPPRRAGKKERTRQEIYRTAMRLFAEDDYDKVTIEDICAGAGVAKATFFLHFA 69

Query: 76  RKTLILEEWMXXXXXXXXXXXXV-DGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPP 134
            K  ++  +                G A   L  +   + +    + +  R+ +   +  
Sbjct: 70  GKAALITAFNEEITQAMSERLAEHKGTAEEQLFFIASVFEEAWRDNATVMRKMLSEYMDQ 129

Query: 135 ALLHTTMLVDHPIGLDFAALIV---ESEAALKPSVQPEQVGRLLAAGYVSAMSQWIQEEP 191
              H      +   +D  + I+   +     +P   PE VG        SA++ W QE P
Sbjct: 130 PAKHLVATDLNKSVIDLVSSILRRGQERGEFRPGFTPE-VGAAAIVATWSAITAWWQEHP 188

Query: 192 PTSDLGAELRALLDLVLSG 210
            T D     R  LD+ L+G
Sbjct: 189 ET-DTSTFNREFLDIALNG 206


>tr|D6KB76|D6KB76_9ACTO Tax_Id=645465 SubName:
          Full=Transcriptional regulator;[Streptomyces sp. e14]
          Length = 214

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 4/61 (6%)

Query: 23 GPTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILE 82
          G TRR   R     ++YEAA+ L  ++GF  T++D+IAER+G+++ TV+ +F  K+++ E
Sbjct: 15 GSTRREATR----QKLYEAAVTLIAEQGFSATTVDEIAERAGVAKGTVYYNFASKSVLFE 70

Query: 83 E 83
          E
Sbjct: 71 E 71


>tr|D1SZV3|D1SZV3_9BURK Tax_Id=643561 SubName:
          Full=Transcriptional regulator, TetR family;[Acidovorax
          avenae subsp. avenae ATCC 19860]
          Length = 242

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/58 (41%), Positives = 40/58 (68%)

Query: 26 RRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEE 83
          RRA ++  R   + EAA+ LFV+RG+  T +D++A R+G+S+ T+F +FP K  + +E
Sbjct: 17 RRARRKEARPGELLEAALDLFVERGYAATKVDEVAARAGVSKGTLFLYFPSKEDLFKE 74


>tr|B9C4N1|B9C4N1_9BURK Tax_Id=513053 SubName: Full=Transcriptional
           regulator, TetR family;[Burkholderia multivorans CGD2M]
          Length = 215

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 26  RRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWM 85
           RRA KR +    + + A  LF   G++  +M+ IA+ + +++ T++ HF  K  +L  W+
Sbjct: 10  RRARKRIQMLAHLADTAARLFDAHGYDAVTMEQIADEADVAKRTLYNHFATKEAVLAHWL 69

Query: 86  XXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPALLH---TTML 142
                        D    R     +   LD  AA        + A +    L    T   
Sbjct: 70  ERELARDLAHLQRDVARRRTFASRIACVLDASAAWCEQHPAHLLAYLRHRFLSIGATAPE 129

Query: 143 VDHPIGLDFA----ALIVESEAA--LKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDL 196
              P G D A     LI +++ A  L  S+  EQ+       Y+ AM +W+    P   L
Sbjct: 130 GGDPGGGDIAPVWHRLIADAQRAGELNRSLPAEQLATWFHHLYLGAMLRWL--TVPGLSL 187

Query: 197 GAELRALLDLVLSGAQ 212
             E RA+  L + GAQ
Sbjct: 188 KQEFRAIARLFVEGAQ 203


>tr|B9BKM5|B9BKM5_9BURK Tax_Id=513052 SubName: Full=Transcriptional
           regulator, TetR family;[Burkholderia multivorans CGD2]
          Length = 215

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 26  RRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWM 85
           RRA KR +    + + A  LF   G++  +M+ IA+ + +++ T++ HF  K  +L  W+
Sbjct: 10  RRARKRIQMLAHLADTAARLFDAHGYDAVTMEQIADEADVAKRTLYNHFATKEAVLAHWL 69

Query: 86  XXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPALLH---TTML 142
                        D    R     +   LD  AA        + A +    L    T   
Sbjct: 70  ERELARDLAHLQRDVARRRTFASRIACVLDASAAWCEQHPAHLLAYLRHRFLSIGATAPE 129

Query: 143 VDHPIGLDFA----ALIVESEAA--LKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDL 196
              P G D A     LI +++ A  L  S+  EQ+       Y+ AM +W+    P   L
Sbjct: 130 GGDPGGGDIAPVWHRLIADAQRAGELNRSLPAEQLATWFHHLYLGAMLRWL--TVPGLSL 187

Query: 197 GAELRALLDLVLSGAQ 212
             E RA+  L + GAQ
Sbjct: 188 KQEFRAIARLFVEGAQ 203


>tr|B9B211|B9B211_9BURK Tax_Id=513051 SubName: Full=Transcriptional
           regulator, TetR family;[Burkholderia multivorans CGD1]
          Length = 218

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 26  RRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEEWM 85
           RRA KR +    + + A  LF   G++  +M+ IA+ + +++ T++ HF  K  +L  W+
Sbjct: 10  RRARKRIQMLAHLADTAARLFDAHGYDAVTMEQIADEADVAKRTLYNHFATKEAVLAHWL 69

Query: 86  XXXXXXXXXXXXVDGVAGRPLRDVLGAYLDTLAASNSAAREEMCALVPPALLH---TTML 142
                        D    R     +   LD  AA        + A +    L    T   
Sbjct: 70  ERELARDLAHLQRDVARRRTFASRIACVLDASAAWCERHPAHLLAYLRHRFLSIGATAPE 129

Query: 143 VDHPIGLDFA----ALIVESEAA--LKPSVQPEQVGRLLAAGYVSAMSQWIQEEPPTSDL 196
              P G D A     LI +++ A  L  S+  EQ+       Y+ AM +W+    P   L
Sbjct: 130 GGDPGGGDIAPVWHRLIADAQRAGELNRSLPAEQLATWFHHLYLGAMLRWL--TVPGLSL 187

Query: 197 GAELRALLDLVLSGAQ 212
             E RA+  L + GAQ
Sbjct: 188 KQEFRAVAKLFVEGAQ 203


>tr|B1M520|B1M520_METRJ Tax_Id=426355 SubName:
          Full=Transcriptional regulator, TetR
          family;[Methylobacterium radiotolerans]
          Length = 221

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/54 (44%), Positives = 35/54 (64%)

Query: 24 PTRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRK 77
          P RR+ KR      + +AA  LF++RGF+  ++D+IA  + + R TVF HFPRK
Sbjct: 9  PDRRSRKRLATRQAISDAATRLFLERGFDAVTVDEIAAAADVGRMTVFNHFPRK 62


>tr|C9NJ46|C9NJ46_9ACTO Tax_Id=591167 SubName:
          Full=Transcriptional regulator, TetR
          family;[Streptomyces flavogriseus ATCC 33331]
          Length = 203

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 4/59 (6%)

Query: 25 TRRALKRAERHDRVYEAAIALFVDRGFETTSMDDIAERSGLSRSTVFTHFPRKTLILEE 83
          TRR + R     ++YEAA+ L  ++GF  T++D+IAER+G+++ TV+ +F  KT + EE
Sbjct: 7  TRRQITR----QKLYEAAVTLIAEKGFSATTVDEIAERAGVAKGTVYYNFKSKTELFEE 61


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.319    0.133    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,571,924,532
Number of extensions: 55933348
Number of successful extensions: 163352
Number of sequences better than 10.0: 8533
Number of HSP's gapped: 164334
Number of HSP's successfully gapped: 8574
Length of query: 217
Length of database: 4,236,830,644
Length adjustment: 132
Effective length of query: 85
Effective length of database: 2,585,792,596
Effective search space: 219792370660
Effective search space used: 219792370660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)