BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_4235 (326 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0R024|RSMH_MYCS2 Tax_Id=246196 (rsmH)RecName: Full=Ribosomal... 597 e-169 sp|Q1B6W3|RSMH_MYCSS Tax_Id=164756 (rsmH)RecName: Full=Ribosomal... 459 e-127 sp|A1UI62|RSMH_MYCSK Tax_Id=189918 (rsmH)RecName: Full=Ribosomal... 459 e-127 sp|A3Q1M6|RSMH_MYCSJ Tax_Id=164757 (rsmH)RecName: Full=Ribosomal... 459 e-127 sp|A1TAX6|RSMH_MYCVP Tax_Id=350058 (rsmH)RecName: Full=Ribosomal... 458 e-127 sp|A4TBF6|RSMH_MYCGI Tax_Id=350054 (rsmH)RecName: Full=Ribosomal... 453 e-125 sp|A0QF44|RSMH_MYCA1 Tax_Id=243243 (rsmH)RecName: Full=Ribosomal... 425 e-117 sp|P62474|RSMH_MYCPA Tax_Id=1770 (rsmH)RecName: Full=Ribosomal R... 421 e-116 tr|D5P6X8|D5P6X8_9MYCO Tax_Id=525368 (mraW)SubName: Full=S-adeno... 419 e-115 sp|B2HGS5|RSMH_MYCMM Tax_Id=216594 (rsmH)RecName: Full=Ribosomal... 415 e-114 sp|A0PTJ6|RSMH_MYCUA Tax_Id=362242 (rsmH)RecName: Full=Ribosomal... 410 e-112 sp|P65429|RSMH_MYCTU Tax_Id=1773 (rsmH)RecName: Full=Ribosomal R... 407 e-111 sp|A5U4J2|RSMH_MYCTA Tax_Id=419947 (rsmH)RecName: Full=Ribosomal... 407 e-111 sp|C1AQ81|RSMH_MYCBT Tax_Id=561275 (rsmH)RecName: Full=Ribosomal... 407 e-111 sp|A1KKK8|RSMH_MYCBP Tax_Id=410289 (rsmH)RecName: Full=Ribosomal... 407 e-111 sp|P65430|RSMH_MYCBO Tax_Id=1765 (rsmH)RecName: Full=Ribosomal R... 407 e-111 tr|C6DPP3|C6DPP3_MYCTK Tax_Id=478434 SubName: Full=Methylase Mra... 407 e-111 tr|A5WPD7|A5WPD7_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 407 e-111 tr|D6G666|D6G666_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 407 e-111 tr|D6FWI6|D6FWI6_MYCTU Tax_Id=611304 SubName: Full=S-adenosyl-me... 407 e-111 tr|D6FI61|D6FI61_MYCTU Tax_Id=611303 SubName: Full=S-adenosyl-me... 407 e-111 tr|D6F5U6|D6F5U6_MYCTU Tax_Id=611302 SubName: Full=MraW methylas... 407 e-111 tr|D5ZG62|D5ZG62_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 407 e-111 tr|D5Z533|D5Z533_MYCTU Tax_Id=537209 SubName: Full=Putative unch... 407 e-111 tr|D5YRX3|D5YRX3_MYCTU Tax_Id=515616 SubName: Full=S-adenosyl-me... 407 e-111 tr|D5YGZ6|D5YGZ6_MYCTU Tax_Id=520140 SubName: Full=S-adenosyl-me... 407 e-111 tr|D5Y508|D5Y508_MYCTU Tax_Id=520141 SubName: Full=S-adenosyl-me... 407 e-111 tr|D5XUT1|D5XUT1_MYCTU Tax_Id=515617 SubName: Full=Putative unch... 407 e-111 tr|A4KIU0|A4KIU0_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 407 e-111 sp|B1MP29|RSMH_MYCA9 Tax_Id=561007 (rsmH)RecName: Full=Ribosomal... 402 e-110 sp|C1AU63|RSMH_RHOOB Tax_Id=632772 (rsmH)RecName: Full=Ribosomal... 395 e-108 sp|Q0SHR3|RSMH_RHOSR Tax_Id=101510 (rsmH)RecName: Full=Ribosomal... 395 e-108 sp|O69560|RSMH_MYCLE Tax_Id=1769 (rsmH)RecName: Full=Ribosomal R... 392 e-107 sp|B8ZQP2|RSMH_MYCLB Tax_Id=561304 (rsmH)RecName: Full=Ribosomal... 392 e-107 tr|D5PP47|D5PP47_COREQ Tax_Id=525370 (mraW)SubName: Full=S-adeno... 385 e-105 sp|Q5YYY7|RSMH_NOCFA Tax_Id=37329 (rsmH)RecName: Full=Ribosomal ... 375 e-102 tr|D0LAT9|D0LAT9_GORB4 Tax_Id=526226 (rsmH)RecName: Full=Ribosom... 365 3e-99 tr|C3JJ56|C3JJ56_RHOER Tax_Id=596309 (mraW)RecName: Full=Ribosom... 365 3e-99 sp|C1A0Y3|RSMH_RHOE4 Tax_Id=234621 (rsmH)RecName: Full=Ribosomal... 365 4e-99 tr|C6WDF0|C6WDF0_ACTMD Tax_Id=446462 (rsmH)RecName: Full=Ribosom... 360 2e-97 sp|Q4JWA3|RSMH_CORJK Tax_Id=306537 (rsmH)RecName: Full=Ribosomal... 353 2e-95 tr|C8RRH3|C8RRH3_CORJE Tax_Id=525262 (mraW)RecName: Full=Ribosom... 352 3e-95 sp|Q8FNT2|RSMH_COREF Tax_Id=152794 (rsmH)RecName: Full=Ribosomal... 348 4e-94 tr|C8NQ20|C8NQ20_COREF Tax_Id=196164 (mraW)RecName: Full=Ribosom... 348 4e-94 sp|Q8NNM7|RSMH_CORGL Tax_Id=1718 (rsmH)RecName: Full=Ribosomal R... 348 5e-94 >sp|A0R024|RSMH_MYCS2 Tax_Id=246196 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium smegmatis] Length = 326 Score = 597 bits (1539), Expect = e-169 Identities = 308/326 (94%), Positives = 308/326 (94%) Query: 1 MTNDPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRL 60 MTNDPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRL Sbjct: 1 MTNDPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRL 60 Query: 61 IGLDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQL 120 IGLDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQL Sbjct: 61 IGLDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQL 120 Query: 121 DQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIV 180 DQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIV Sbjct: 121 DQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIV 180 Query: 181 RRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXX 240 RRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDS Sbjct: 181 RRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSLRAAIPAAL 240 Query: 241 XXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERAD 300 VVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERAD Sbjct: 241 AALRPGGRIVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERAD 300 Query: 301 EQEIERNPRSAPVRLRALEKVGGRGS 326 EQEIERNPRSAPVRLRALEKVGGRGS Sbjct: 301 EQEIERNPRSAPVRLRALEKVGGRGS 326 >sp|Q1B6W3|RSMH_MYCSS Tax_Id=164756 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium sp.] Length = 324 Score = 459 bits (1181), Expect = e-127 Identities = 238/316 (75%), Positives = 259/316 (81%), Gaps = 3/316 (0%) Query: 9 HIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDPN 68 HIPVLLDRCVELL PALTR +PDG AVLVDATLGAGGH+ RFL+D P L LIGLDRDP Sbjct: 3 HIPVLLDRCVELLTPALTRRNPDGRGAVLVDATLGAGGHAHRFLSDLPGLHLIGLDRDPQ 62 Query: 69 ALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQLDQKQRGFS 128 AL IAG+RLAPFGDRV+LVRTRYDGI ALA+ GV + G LFDLGVSSMQLD+ +RGFS Sbjct: 63 ALQIAGERLAPFGDRVSLVRTRYDGIDDALAQTGVAEVSGFLFDLGVSSMQLDRTERGFS 122 Query: 129 YSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAKQPF 188 YSADAPLDMRMD DA LTAA++VNT+ K +TRILR++GEERFA RIA IVRRR P Sbjct: 123 YSADAPLDMRMDSDAPLTAADVVNTFAEKDITRILREFGEERFAARIAKHIVRRR---PL 179 Query: 189 TTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXXXXXX 248 TT ELVELLY+AIPAPARRTGGHPAKRTFQALRIAVN+ELDS Sbjct: 180 NTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIAVNSELDSLRAAVPAALAALETGGR 239 Query: 249 XVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEIERNP 308 VVMAYQSLEDRIVK F+ TASRTPPGLP+ELPGHEPEFVA+TRGAERA +EIERNP Sbjct: 240 IVVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHEPEFVALTRGAERATPEEIERNP 299 Query: 309 RSAPVRLRALEKVGGR 324 RSAPVRLRALEKV GR Sbjct: 300 RSAPVRLRALEKVAGR 315 >sp|A1UI62|RSMH_MYCSK Tax_Id=189918 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium sp.] Length = 324 Score = 459 bits (1181), Expect = e-127 Identities = 238/316 (75%), Positives = 259/316 (81%), Gaps = 3/316 (0%) Query: 9 HIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDPN 68 HIPVLLDRCVELL PALTR +PDG AVLVDATLGAGGH+ RFL+D P L LIGLDRDP Sbjct: 3 HIPVLLDRCVELLTPALTRRNPDGRGAVLVDATLGAGGHAHRFLSDLPGLHLIGLDRDPQ 62 Query: 69 ALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQLDQKQRGFS 128 AL IAG+RLAPFGDRV+LVRTRYDGI ALA+ GV + G LFDLGVSSMQLD+ +RGFS Sbjct: 63 ALQIAGERLAPFGDRVSLVRTRYDGIDDALAQTGVAEVSGFLFDLGVSSMQLDRTERGFS 122 Query: 129 YSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAKQPF 188 YSADAPLDMRMD DA LTAA++VNT+ K +TRILR++GEERFA RIA IVRRR P Sbjct: 123 YSADAPLDMRMDSDAPLTAADVVNTFAEKDITRILREFGEERFAARIAKHIVRRR---PL 179 Query: 189 TTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXXXXXX 248 TT ELVELLY+AIPAPARRTGGHPAKRTFQALRIAVN+ELDS Sbjct: 180 NTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIAVNSELDSLRAAVPAALAALETGGR 239 Query: 249 XVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEIERNP 308 VVMAYQSLEDRIVK F+ TASRTPPGLP+ELPGHEPEFVA+TRGAERA +EIERNP Sbjct: 240 IVVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHEPEFVALTRGAERATPEEIERNP 299 Query: 309 RSAPVRLRALEKVGGR 324 RSAPVRLRALEKV GR Sbjct: 300 RSAPVRLRALEKVAGR 315 >sp|A3Q1M6|RSMH_MYCSJ Tax_Id=164757 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium sp.] Length = 324 Score = 459 bits (1181), Expect = e-127 Identities = 238/316 (75%), Positives = 259/316 (81%), Gaps = 3/316 (0%) Query: 9 HIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDPN 68 HIPVLLDRCVELL PALTR +PDG AVLVDATLGAGGH+ RFL+D P L LIGLDRDP Sbjct: 3 HIPVLLDRCVELLTPALTRRNPDGRGAVLVDATLGAGGHAHRFLSDLPGLHLIGLDRDPQ 62 Query: 69 ALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQLDQKQRGFS 128 AL IAG+RLAPFGDRV+LVRTRYDGI ALA+ GV + G LFDLGVSSMQLD+ +RGFS Sbjct: 63 ALQIAGERLAPFGDRVSLVRTRYDGIDDALAQTGVAEVSGFLFDLGVSSMQLDRTERGFS 122 Query: 129 YSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAKQPF 188 YSADAPLDMRMD DA LTAA++VNT+ K +TRILR++GEERFA RIA IVRRR P Sbjct: 123 YSADAPLDMRMDSDAPLTAADVVNTFAEKDITRILREFGEERFAARIAKHIVRRR---PL 179 Query: 189 TTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXXXXXX 248 TT ELVELLY+AIPAPARRTGGHPAKRTFQALRIAVN+ELDS Sbjct: 180 NTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIAVNSELDSLRAAIPAALGALETGGR 239 Query: 249 XVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEIERNP 308 VVMAYQSLEDRIVK F+ TASRTPPGLP+ELPGHEPEFVA+TRGAERA +EIERNP Sbjct: 240 IVVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHEPEFVALTRGAERATPEEIERNP 299 Query: 309 RSAPVRLRALEKVGGR 324 RSAPVRLRALEKV GR Sbjct: 300 RSAPVRLRALEKVAGR 315 >sp|A1TAX6|RSMH_MYCVP Tax_Id=350058 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium vanbaalenii] Length = 324 Score = 458 bits (1179), Expect = e-127 Identities = 238/321 (74%), Positives = 263/321 (81%), Gaps = 2/321 (0%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 D HIPVLLDRCVELLAPALTRT DG+ A LVDATLGAGGHSERFLT FPALRLIGLDR Sbjct: 4 DEPHIPVLLDRCVELLAPALTRTSTDGSGATLVDATLGAGGHSERFLTQFPALRLIGLDR 63 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRR--IDGVLFDLGVSSMQLDQK 123 DP+AL IAGDRLA FGDRVTLVRTRYDGI +A+AE+ +D +LFDLGVSSMQLD+ Sbjct: 64 DPDALHIAGDRLARFGDRVTLVRTRYDGIAAAVAESNCAATGVDAILFDLGVSSMQLDRV 123 Query: 124 QRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRR 183 +RGF+YS DAPLDMRMD + LTAA+++NTYD K L R+LR YGEE+FAGRIA +IVRRR Sbjct: 124 ERGFAYSVDAPLDMRMDSGSDLTAAQVLNTYDEKALARVLRVYGEEKFAGRIAAQIVRRR 183 Query: 184 AKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXX 243 A PF+TT ELVELLY+AIPAPARRTGGHPAKRTFQALRI VNAEL+S Sbjct: 184 ANTPFSTTGELVELLYQAIPAPARRTGGHPAKRTFQALRIEVNAELESLRLAIPAALEVL 243 Query: 244 XXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQE 303 VMAYQSLEDRIVK F+ TASRTPPGLP+ELPGH P FVA+TRGAERAD +E Sbjct: 244 RPHGRIAVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHGPRFVALTRGAERADAEE 303 Query: 304 IERNPRSAPVRLRALEKVGGR 324 IERNPRSA VRLRALEKVGG+ Sbjct: 304 IERNPRSASVRLRALEKVGGQ 324 >sp|A4TBF6|RSMH_MYCGI Tax_Id=350054 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium gilvum] Length = 317 Score = 453 bits (1166), Expect = e-125 Identities = 234/318 (73%), Positives = 259/318 (81%), Gaps = 5/318 (1%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 D H+PVLLDRCVELLAPALTR A LVDATLGAGGHSERFLTDFP LRLIGLDR Sbjct: 4 DQPHVPVLLDRCVELLAPALTREG-----ATLVDATLGAGGHSERFLTDFPGLRLIGLDR 58 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQLDQKQR 125 DP+AL IAG+RLAPF DR+TLVRTRYDGI A+ +A +D +LFDLGVSSMQLD+ +R Sbjct: 59 DPDALRIAGERLAPFADRITLVRTRYDGIADAVRDAAGGSVDAILFDLGVSSMQLDRVER 118 Query: 126 GFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAK 185 GFSYS DAPLDMRMD A LTAA+++N+YD + L R+LR+YGEE+FAGRIA IVRRRA Sbjct: 119 GFSYSTDAPLDMRMDSGADLTAAQVLNSYDERALARVLREYGEEKFAGRIAAFIVRRRAV 178 Query: 186 QPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXXX 245 PFTTT ELVELLY+AIPAPARRTGGHPAKRTFQALRI VNAEL+S Sbjct: 179 TPFTTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIEVNAELESLRSAIPAALQALRP 238 Query: 246 XXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEIE 305 VMAYQSLEDRIVK AF+ TASRTPPGLP+ELPGH PEFVA+TRGAERAD +EIE Sbjct: 239 HGRLAVMAYQSLEDRIVKTAFAAATASRTPPGLPVELPGHGPEFVALTRGAERADAEEIE 298 Query: 306 RNPRSAPVRLRALEKVGG 323 RNPRSAPVRLRA+EKVGG Sbjct: 299 RNPRSAPVRLRAVEKVGG 316 >sp|A0QF44|RSMH_MYCA1 Tax_Id=243243 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium avium] Length = 335 Score = 425 bits (1092), Expect = e-117 Identities = 219/321 (68%), Positives = 253/321 (78%), Gaps = 3/321 (0%) Query: 3 NDPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIG 62 + PD GH+PVLL+RCVELL PALTR PDG+ AVL+DATLGAGGH+ERFLTD P LRLI Sbjct: 4 DSPDFGHVPVLLERCVELLTPALTRRHPDGSGAVLLDATLGAGGHAERFLTDLPGLRLIA 63 Query: 63 LDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQ 119 LDRDP+AL IA +RLA F DR+TLV TRYDGI +AL E+G +DG+LFDLGVSSMQ Sbjct: 64 LDRDPSALEIARERLARFADRITLVHTRYDGIAAALTESGYAATESVDGILFDLGVSSMQ 123 Query: 120 LDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKI 179 LD+ +RGF+Y+ DAPLDMRMDP + LTAA+I+NTYD L IL YGEERFA RIA +I Sbjct: 124 LDRPERGFAYAQDAPLDMRMDPGSPLTAADILNTYDEAELADILHRYGEERFARRIAAQI 183 Query: 180 VRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXX 239 VRRRAK+PFT+T++LV LLY+AIPAPARRTGGHPAKRTFQALRIAVN ELD+ Sbjct: 184 VRRRAKEPFTSTADLVSLLYQAIPAPARRTGGHPAKRTFQALRIAVNDELDTLRCALPAA 243 Query: 240 XXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERA 299 VV+AYQSLEDRIVK+ F+ ASRTP LP+ELPGHEP F A+T GA RA Sbjct: 244 LDALAVDGRIVVLAYQSLEDRIVKRLFAQAVASRTPVDLPVELPGHEPRFRALTHGAGRA 303 Query: 300 DEQEIERNPRSAPVRLRALEK 320 D EIERNPRSA VRLRAL++ Sbjct: 304 DAAEIERNPRSAAVRLRALQR 324 >sp|P62474|RSMH_MYCPA Tax_Id=1770 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium paratuberculosis] Length = 335 Score = 421 bits (1081), Expect = e-116 Identities = 217/321 (67%), Positives = 251/321 (78%), Gaps = 3/321 (0%) Query: 3 NDPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIG 62 + PD GH+PVLL+RCVELL PALTR PDG+ AVL+DATLGAGGH+ERFL D P LRLI Sbjct: 4 DSPDFGHVPVLLERCVELLTPALTRRHPDGSGAVLLDATLGAGGHAERFLADLPGLRLIA 63 Query: 63 LDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQ 119 LDRDP+AL IA +RLA F DR+TLV RYDGI +AL E+G +DG+LFDLGVSSMQ Sbjct: 64 LDRDPSALEIARERLARFADRITLVHMRYDGIAAALTESGYAATESVDGILFDLGVSSMQ 123 Query: 120 LDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKI 179 LD+ +RGF+Y+ DAPLDMRMDP + LTAA+I+NTYD L IL YGEERFA RIA +I Sbjct: 124 LDRPERGFAYAQDAPLDMRMDPGSPLTAADILNTYDEAELADILHRYGEERFARRIAAQI 183 Query: 180 VRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXX 239 VRRRAK+PFT+T++LV LLY+AIPAPARRTGGHPAKRTFQALRIAVN ELD+ Sbjct: 184 VRRRAKEPFTSTADLVSLLYQAIPAPARRTGGHPAKRTFQALRIAVNDELDTLRRALPAA 243 Query: 240 XXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERA 299 VV+AYQSLEDRIVK+ F+ ASRTP LP+ELPGHEP F A+T GA RA Sbjct: 244 LDALAVDGRIVVLAYQSLEDRIVKRLFAQAVASRTPVDLPVELPGHEPRFRALTHGAGRA 303 Query: 300 DEQEIERNPRSAPVRLRALEK 320 D EIERNPRSA VRLRAL++ Sbjct: 304 DAAEIERNPRSAAVRLRALQR 324 >tr|D5P6X8|D5P6X8_9MYCO Tax_Id=525368 (mraW)SubName: Full=S-adenosyl-methyltransferase MraW; EC=2.1.1.-;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 334 Score = 419 bits (1078), Expect = e-115 Identities = 217/325 (66%), Positives = 254/325 (78%), Gaps = 4/325 (1%) Query: 1 MTNDPD-HGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALR 59 M ND GH+PVLL RCVELL PALTR D DG+ AVL+DATLGAGGH+ERFLTD P LR Sbjct: 1 MANDSSAFGHVPVLLGRCVELLTPALTRHDADGSGAVLLDATLGAGGHAERFLTDLPGLR 60 Query: 60 LIGLDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVS 116 LIGLDRDPNAL I RLA F DR+TLV TRYDG+ +ALAE+G + +DG+LFDLGVS Sbjct: 61 LIGLDRDPNALEITRARLARFADRITLVHTRYDGLAAALAESGYGAIESVDGMLFDLGVS 120 Query: 117 SMQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIA 176 SMQLD+ +RGF+Y+ DAPLDMRMDP++ LTAA+I+NTYD L IL YGEERFA RIA Sbjct: 121 SMQLDRAERGFAYAQDAPLDMRMDPESPLTAADILNTYDEAALADILHRYGEERFARRIA 180 Query: 177 DKIVRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXX 236 ++VRRRA+ PF +T++LV LLY+AIPAPARRTGGHPAKRTFQALRIAVN EL+S Sbjct: 181 AQVVRRRARAPFASTADLVALLYQAIPAPARRTGGHPAKRTFQALRIAVNDELNSLRAAT 240 Query: 237 XXXXXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGA 296 VV+AYQSLEDRIVK+ F+ ASRTP LP+ELPGHEP F ++T GA Sbjct: 241 PAGLDALAVGGRMVVLAYQSLEDRIVKRLFAAAVASRTPVDLPVELPGHEPRFRSLTHGA 300 Query: 297 ERADEQEIERNPRSAPVRLRALEKV 321 ERAD E+ERNPRSA VRLRA+++V Sbjct: 301 ERADADEVERNPRSAAVRLRAVQRV 325 >sp|B2HGS5|RSMH_MYCMM Tax_Id=216594 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium marinum] Length = 345 Score = 415 bits (1067), Expect = e-114 Identities = 218/319 (68%), Positives = 245/319 (76%), Gaps = 3/319 (0%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 D H+PVL RCVELL PALTR DG+EAVLVDAT+GAGGH+ERFLT+ P LRLIGLDR Sbjct: 12 DFHHVPVLAQRCVELLRPALTRHHADGSEAVLVDATIGAGGHAERFLTELPGLRLIGLDR 71 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQ 122 DP+AL I RLA F DRVTLV TRYDG+ SAL E G + IDG LFDLGVSSMQLDQ Sbjct: 72 DPSALEIVRTRLARFADRVTLVHTRYDGLASALTELGYGAAQSIDGALFDLGVSSMQLDQ 131 Query: 123 KQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRR 182 +RGF+YS DAPLDMRM+P + L+AA+I+NTYD L IL YGEERFA RIA +I+RR Sbjct: 132 AERGFAYSKDAPLDMRMNPQSALSAADIINTYDEAALADILHRYGEERFARRIAARIIRR 191 Query: 183 RAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXX 242 RA +PFTTT+ELV LLYEAIPA ARRTGGHPAKRTFQALRIAVN EL S Sbjct: 192 RADKPFTTTAELVALLYEAIPAAARRTGGHPAKRTFQALRIAVNDELGSLRSAIPAAMDA 251 Query: 243 XXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQ 302 VVMAYQSLEDRIVK+ F+ ASRTP LP+ELPGH P F ++T GAERAD Sbjct: 252 LAVGGRIVVMAYQSLEDRIVKRVFADAVASRTPMDLPVELPGHGPRFRSLTHGAERADAA 311 Query: 303 EIERNPRSAPVRLRALEKV 321 E+ERNPRSAPVRLRALE++ Sbjct: 312 EVERNPRSAPVRLRALERL 330 >sp|A0PTJ6|RSMH_MYCUA Tax_Id=362242 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium ulcerans] Length = 345 Score = 410 bits (1053), Expect = e-112 Identities = 215/319 (67%), Positives = 243/319 (76%), Gaps = 3/319 (0%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 D H+PVL RCVELL PALTR DG+EAVLVDAT+GAGGH+ERFLT+ P LRLIGLDR Sbjct: 12 DFHHVPVLAQRCVELLRPALTRHHADGSEAVLVDATIGAGGHAERFLTELPGLRLIGLDR 71 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQ 122 DP+AL I RLA F DRVTLV TRYDG+ SAL E G + IDG LFDLGVSSMQLDQ Sbjct: 72 DPSALEIVRTRLARFTDRVTLVHTRYDGLASALTELGYGAAQSIDGALFDLGVSSMQLDQ 131 Query: 123 KQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRR 182 +RGF+YS DAPLDMRM+P + L+ A+I+NTYD L IL YGEERFA RIA +I+RR Sbjct: 132 AERGFAYSKDAPLDMRMNPQSALSGADIINTYDEAALADILHRYGEERFARRIAARIIRR 191 Query: 183 RAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXX 242 RA +PFTTT+ELV LLYEAIPA ARRTGGHPAKRTFQALRIAVN EL S Sbjct: 192 RADRPFTTTAELVALLYEAIPAAARRTGGHPAKRTFQALRIAVNDELGSLRSAVPAAMDA 251 Query: 243 XXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQ 302 VVMAYQSLEDRIVK+ F+ ASRTP LP+ELPGH P F ++T GAERAD Sbjct: 252 LAVGGRIVVMAYQSLEDRIVKRVFADAVASRTPVDLPVELPGHGPRFRSLTHGAERADAA 311 Query: 303 EIERNPRSAPVRLRALEKV 321 E+E NPRSAPVRLRAL+++ Sbjct: 312 EVEHNPRSAPVRLRALQRL 330 >sp|P65429|RSMH_MYCTU Tax_Id=1773 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium tuberculosis] Length = 344 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 12 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 71 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 72 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 131 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 132 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 191 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 192 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 251 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 252 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 311 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 312 ERNPRSTPVRLRALQRVEHR 331 >sp|A5U4J2|RSMH_MYCTA Tax_Id=419947 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium tuberculosis] Length = 344 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 12 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 71 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 72 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 131 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 132 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 191 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 192 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 251 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 252 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 311 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 312 ERNPRSTPVRLRALQRVEHR 331 >sp|C1AQ81|RSMH_MYCBT Tax_Id=561275 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium bovis] Length = 344 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 12 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 71 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 72 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 131 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 132 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 191 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 192 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 251 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 252 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 311 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 312 ERNPRSTPVRLRALQRVEHR 331 >sp|A1KKK8|RSMH_MYCBP Tax_Id=410289 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium bovis] Length = 344 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 12 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 71 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 72 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 131 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 132 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 191 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 192 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 251 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 252 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 311 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 312 ERNPRSTPVRLRALQRVEHR 331 >sp|P65430|RSMH_MYCBO Tax_Id=1765 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium bovis] Length = 344 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 12 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 71 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 72 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 131 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 132 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 191 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 192 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 251 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 252 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 311 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 312 ERNPRSTPVRLRALQRVEHR 331 >tr|C6DPP3|C6DPP3_MYCTK Tax_Id=478434 SubName: Full=Methylase MraW;[Mycobacterium tuberculosis] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|A5WPD7|A5WPD7_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D6G666|D6G666_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D6FWI6|D6FWI6_MYCTU Tax_Id=611304 SubName: Full=S-adenosyl-methyltransferase MraW;[Mycobacterium tuberculosis K85] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D6FI61|D6FI61_MYCTU Tax_Id=611303 SubName: Full=S-adenosyl-methyltransferase MraW;[Mycobacterium tuberculosis CPHL_A] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D6F5U6|D6F5U6_MYCTU Tax_Id=611302 SubName: Full=MraW methylase MraW;[Mycobacterium tuberculosis T46] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D5ZG62|D5ZG62_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D5Z533|D5Z533_MYCTU Tax_Id=537209 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis GM 1503] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D5YRX3|D5YRX3_MYCTU Tax_Id=515616 SubName: Full=S-adenosyl-methyltransferase MraW;[Mycobacterium tuberculosis 02_1987] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D5YGZ6|D5YGZ6_MYCTU Tax_Id=520140 SubName: Full=S-adenosyl-methyltransferase MraW;[Mycobacterium tuberculosis EAS054] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D5Y508|D5Y508_MYCTU Tax_Id=520141 SubName: Full=S-adenosyl-methyltransferase MraW;[Mycobacterium tuberculosis T85] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|D5XUT1|D5XUT1_MYCTU Tax_Id=515617 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T92] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >tr|A4KIU0|A4KIU0_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 396 Score = 407 bits (1045), Expect = e-111 Identities = 213/320 (66%), Positives = 243/320 (75%), Gaps = 3/320 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PVL RC ELL PALTR PDG++AVL+DAT+GAGGH+ERFL P LRLIGLDRDP Sbjct: 64 GHVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRLIGLDRDP 123 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 AL +A RL F DR+TLV TRYD + +ALAE+G V +DG+LFDLGVSSMQLD+ + Sbjct: 124 TALDVARSRLVRFADRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAE 183 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+Y+ DAPLDMRMDP LTAA+IVNTYD L ILR YGEERFA RIA IVRRRA Sbjct: 184 RGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRA 243 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 244 KTPFTSTAELVALLYQAIPAPARRVGGHPAKRTFQALRIAVNDELESLRTAVPAALDALA 303 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V+AYQSLEDRIVK+ F+ AS TP GLP+ELPGHEP F ++T GAERA EI Sbjct: 304 IGGRIAVLAYQSLEDRIVKRVFAEAVASATPAGLPVELPGHEPRFRSLTHGAERASVAEI 363 Query: 305 ERNPRSAPVRLRALEKVGGR 324 ERNPRS PVRLRAL++V R Sbjct: 364 ERNPRSTPVRLRALQRVEHR 383 >sp|B1MP29|RSMH_MYCA9 Tax_Id=561007 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium abscessus] Length = 331 Score = 402 bits (1032), Expect = e-110 Identities = 213/325 (65%), Positives = 243/325 (74%), Gaps = 3/325 (0%) Query: 3 NDPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIG 62 ND +GHIPV+LDRC ELLAPALT DG+ AVLVDATLGAGGH+E FLT P L +IG Sbjct: 4 NDSRYGHIPVMLDRCYELLAPALTADSTDGSGAVLVDATLGAGGHTEHFLTMLPGLTVIG 63 Query: 63 LDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRR---IDGVLFDLGVSSMQ 119 LDRD NAL IA RLAPFG R V TRYDG+ AL G R +DGVLFDLGVSSMQ Sbjct: 64 LDRDTNALDIARSRLAPFGTRFVGVHTRYDGLADALDGLGYRTTSSVDGVLFDLGVSSMQ 123 Query: 120 LDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKI 179 LDQ +RGF+YS DAPLDMRM+ LTAA+I+NTY A L+R+L +GEERFA RIAD+I Sbjct: 124 LDQAERGFAYSVDAPLDMRMNAQDELTAADILNTYSAVELSRVLSRFGEERFARRIADEI 183 Query: 180 VRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXX 239 VRRRA +PFT + +LVELLY IPA RRTGGHPAKRTFQALRIAVNAEL+S Sbjct: 184 VRRRANEPFTRSGQLVELLYATIPAATRRTGGHPAKRTFQALRIAVNAELESLATAIPAA 243 Query: 240 XXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERA 299 VMAYQSLED+IVK F+ TASR+P LP+ELPG PEF A+TRGAERA Sbjct: 244 MAALRPGGRVAVMAYQSLEDKIVKAEFAAATASRSPIDLPVELPGDAPEFTAITRGAERA 303 Query: 300 DEQEIERNPRSAPVRLRALEKVGGR 324 +++EIE NPRSAPVRLRA+E+V R Sbjct: 304 NDEEIEVNPRSAPVRLRAVERVADR 328 >sp|C1AU63|RSMH_RHOOB Tax_Id=632772 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Rhodococcus opacus] Length = 338 Score = 395 bits (1016), Expect = e-108 Identities = 203/322 (63%), Positives = 237/322 (73%), Gaps = 3/322 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GHIPVLL R ELL PALT DP G AV++DATLG GGHSE FL +P LRL+ LDRDP Sbjct: 16 GHIPVLLHRADELLGPALTANDPHGGGAVMIDATLGLGGHSEHFLRTYPQLRLVALDRDP 75 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGV---RRIDGVLFDLGVSSMQLDQKQ 124 +AL IAG RLAPF DR+T V TRYDGI AL +AG+ + G+LFDLGVSSMQLD+ Sbjct: 76 HALEIAGGRLAPFADRITFVHTRYDGIEDALTQAGLSPRESVHGILFDLGVSSMQLDESD 135 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+YS DAPLDMRMDP +TAAE++NTY L RIL YGEERFAG+IA ++VR+RA Sbjct: 136 RGFAYSIDAPLDMRMDPTTGITAAEVLNTYSHGDLARILSTYGEERFAGKIASEVVRQRA 195 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K+PFTT++ LVELLY IPA RRTGGHPAKRTFQALR+ VN ELDS Sbjct: 196 KEPFTTSAALVELLYRTIPAATRRTGGHPAKRTFQALRVEVNGELDSLRAAVPAALDALT 255 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V M+YQSLEDR+VKQ + + S++P GLP+ELPG PEF +TRGAERA EQEI Sbjct: 256 VGGRVVFMSYQSLEDRVVKQEITPRSKSKSPEGLPVELPGMGPEFRILTRGAERASEQEI 315 Query: 305 ERNPRSAPVRLRALEKVGGRGS 326 E NPRSAPVRLRA E++ R + Sbjct: 316 EENPRSAPVRLRAAERIARRSA 337 >sp|Q0SHR3|RSMH_RHOSR Tax_Id=101510 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Rhodococcus sp.] Length = 338 Score = 395 bits (1015), Expect = e-108 Identities = 204/322 (63%), Positives = 238/322 (73%), Gaps = 3/322 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GHIPVLL R ELL PALT DP G AV++DATLG GGHSE FL +P LRLI LDRDP Sbjct: 16 GHIPVLLHRADELLGPALTVNDPQGGGAVMIDATLGLGGHSEHFLRTYPQLRLIALDRDP 75 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGV---RRIDGVLFDLGVSSMQLDQKQ 124 +AL IAG RLAPF DR+T V TRYDGI AL +AG+ + G+LFDLGVSSMQLD+ Sbjct: 76 HALEIAGGRLAPFADRITFVHTRYDGIEDALDQAGLPAQESVHGILFDLGVSSMQLDESD 135 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGF+YS DAPLDMRMDP +TAAE++NTY L RIL YGEERFAG+IA +IVR+RA Sbjct: 136 RGFAYSIDAPLDMRMDPTTGITAAEVLNTYSHGDLARILSTYGEERFAGKIASEIVRQRA 195 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 K+PFTT++ LVELLY +IPA RRTGGHPAKRTFQALR+ VN ELDS Sbjct: 196 KEPFTTSAALVELLYRSIPAATRRTGGHPAKRTFQALRVEVNGELDSLRAAVPAALDALT 255 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 V M+YQSLEDR+VKQ + + S++P GLP+ELPG PEF +TRGAERA EQE+ Sbjct: 256 VGGRVVFMSYQSLEDRVVKQEITPRSKSKSPEGLPVELPGMGPEFRILTRGAERASEQEV 315 Query: 305 ERNPRSAPVRLRALEKVGGRGS 326 E NPRSAPVRLRA E++ R + Sbjct: 316 EENPRSAPVRLRAAERIARRSA 337 >sp|O69560|RSMH_MYCLE Tax_Id=1769 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium leprae] Length = 340 Score = 392 bits (1006), Expect = e-107 Identities = 208/316 (65%), Positives = 236/316 (74%), Gaps = 3/316 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PV RCV LLAPALTR DG+ A+LVDATLG GGH+ERFLT+FP LRLIGLDRDP Sbjct: 9 GHVPVFAQRCVTLLAPALTRHHADGSNAILVDATLGVGGHAERFLTEFPGLRLIGLDRDP 68 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 +AL IA RL F DRVTL+ TRYD + AL + G V +DGVLFDLGVSSMQLD + Sbjct: 69 SALDIARTRLMRFADRVTLIHTRYDNLAVALNKFGYAAVESVDGVLFDLGVSSMQLDCAE 128 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGFSY+ D PLDMRMDP + ++AA+IVN YD L ILR YGEERFA RIA IVRRRA Sbjct: 129 RGFSYAQDVPLDMRMDPWSPVSAADIVNNYDEAALADILRRYGEERFARRIAAHIVRRRA 188 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 189 HTPFTSTAELVALLYQAIPAPARRIGGHPAKRTFQALRIAVNDELNSLSNVLPAALDALT 248 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 VV+AYQSLEDRIVK+ F+ +SRTP GLP+ELPGH P F +TRGAE AD EI Sbjct: 249 VAGRLVVLAYQSLEDRIVKRVFADAVSSRTPAGLPIELPGHGPRFRLLTRGAEHADAAEI 308 Query: 305 ERNPRSAPVRLRALEK 320 E NPRSA VRLRAL++ Sbjct: 309 ECNPRSAAVRLRALQR 324 >sp|B8ZQP2|RSMH_MYCLB Tax_Id=561304 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Mycobacterium leprae] Length = 340 Score = 392 bits (1006), Expect = e-107 Identities = 208/316 (65%), Positives = 236/316 (74%), Gaps = 3/316 (0%) Query: 8 GHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDP 67 GH+PV RCV LLAPALTR DG+ A+LVDATLG GGH+ERFLT+FP LRLIGLDRDP Sbjct: 9 GHVPVFAQRCVTLLAPALTRHHADGSNAILVDATLGVGGHAERFLTEFPGLRLIGLDRDP 68 Query: 68 NALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQKQ 124 +AL IA RL F DRVTL+ TRYD + AL + G V +DGVLFDLGVSSMQLD + Sbjct: 69 SALDIARTRLMRFADRVTLIHTRYDNLAVALNKFGYAAVESVDGVLFDLGVSSMQLDCAE 128 Query: 125 RGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRA 184 RGFSY+ D PLDMRMDP + ++AA+IVN YD L ILR YGEERFA RIA IVRRRA Sbjct: 129 RGFSYAQDVPLDMRMDPWSPVSAADIVNNYDEAALADILRRYGEERFARRIAAHIVRRRA 188 Query: 185 KQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXX 244 PFT+T+ELV LLY+AIPAPARR GGHPAKRTFQALRIAVN EL+S Sbjct: 189 HTPFTSTAELVALLYQAIPAPARRIGGHPAKRTFQALRIAVNDELNSLSNVLPAALDALT 248 Query: 245 XXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEI 304 VV+AYQSLEDRIVK+ F+ +SRTP GLP+ELPGH P F +TRGAE AD EI Sbjct: 249 VAGRLVVLAYQSLEDRIVKRVFADAVSSRTPAGLPIELPGHGPRFRLLTRGAEHADAAEI 308 Query: 305 ERNPRSAPVRLRALEK 320 E NPRSA VRLRAL++ Sbjct: 309 ECNPRSAAVRLRALQR 324 >tr|D5PP47|D5PP47_COREQ Tax_Id=525370 (mraW)SubName: Full=S-adenosyl-methyltransferase MraW; EC=2.1.1.-;[Rhodococcus equi ATCC 33707] Length = 334 Score = 385 bits (989), Expect = e-105 Identities = 199/319 (62%), Positives = 232/319 (72%), Gaps = 3/319 (0%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 + GH+PVLL+R +LL PA+T +P G AV++DATLG GGHSE FL +P L LIGLDR Sbjct: 12 EFGHVPVLLNRADDLLGPAITADNPRGDGAVMIDATLGLGGHSEYFLRTYPGLHLIGLDR 71 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAG---VRRIDGVLFDLGVSSMQLDQ 122 DP AL IA DRLAP+ DR T V TRYDGI AL +AG V + +LFDLGVSSMQLD+ Sbjct: 72 DPEALRIASDRLAPYADRTTFVHTRYDGIVEALGQAGLDPVGSVHAILFDLGVSSMQLDE 131 Query: 123 KQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRR 182 RGF+YS DAPLDMRM+P +TAAE++NTY L RIL YGEERFAGRIA +IVRR Sbjct: 132 ADRGFAYSIDAPLDMRMNPTTGITAAEVLNTYSHGELARILSTYGEERFAGRIASEIVRR 191 Query: 183 RAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXX 242 R KQPFTT++ LVELLY+ IPA RRTGGHPAKRTFQALR+ VN ELDS Sbjct: 192 RQKQPFTTSAALVELLYDTIPAATRRTGGHPAKRTFQALRVEVNGELDSLRDAIPAGLDA 251 Query: 243 XXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQ 302 V M+YQSLEDR+VKQ + S+TP GLP+ELPG PEF +TRGAERA E Sbjct: 252 LAVGGRVVFMSYQSLEDRVVKQELAPRAKSKTPEGLPVELPGMGPEFKILTRGAERASEA 311 Query: 303 EIERNPRSAPVRLRALEKV 321 EIE NPR+APVRLRA E++ Sbjct: 312 EIEDNPRAAPVRLRAAERI 330 >sp|Q5YYY7|RSMH_NOCFA Tax_Id=37329 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Nocardia farcinica] Length = 324 Score = 375 bits (962), Expect = e-102 Identities = 194/324 (59%), Positives = 237/324 (73%), Gaps = 10/324 (3%) Query: 3 NDPDHG--HIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRL 60 N HG H+PVLL+R ELL PALT AV VDATLG GGH+E FLT +P LRL Sbjct: 2 NREQHGARHVPVLLERADELLGPALTEPG-----AVYVDATLGLGGHAEHFLTRYPGLRL 56 Query: 61 IGLDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVR---RIDGVLFDLGVSS 117 +GLDRD AL +AG+RLAPF +R+TLV TRYDGI AL +AG+ + +L DLGVSS Sbjct: 57 VGLDRDTEALRLAGERLAPFAERITLVHTRYDGIADALGQAGLPPTGSVSAILMDLGVSS 116 Query: 118 MQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIAD 177 MQLD+ +RGF+YS DAPLDMRMDP + +TAA+++NTY L R+L++YGEERFAG+IA Sbjct: 117 MQLDEAERGFAYSVDAPLDMRMDPTSGITAADVLNTYSHGDLARVLKNYGEERFAGKIAS 176 Query: 178 KIVRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXX 237 +++RRRA +PF T+ ELVELLY IPA ARRTGGHPAKRTFQALR+ VN ELDS Sbjct: 177 EVIRRRAHKPFETSGELVELLYATIPAAARRTGGHPAKRTFQALRVEVNGELDSLRAALP 236 Query: 238 XXXXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAE 297 VVM+YQSLEDR+VKQ + T+SRTP LP+ELPG PEF +TRGAE Sbjct: 237 AALDALRVGGRIVVMSYQSLEDRVVKQELAARTSSRTPVDLPVELPGMGPEFRLLTRGAE 296 Query: 298 RADEQEIERNPRSAPVRLRALEKV 321 +A E+EI NPR+APVR+RA E++ Sbjct: 297 KAGEREIAENPRAAPVRMRAAERI 320 >tr|D0LAT9|D0LAT9_GORB4 Tax_Id=526226 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-;[Gordonia bronchialis] Length = 336 Score = 365 bits (938), Expect = 3e-99 Identities = 189/319 (59%), Positives = 230/319 (72%), Gaps = 4/319 (1%) Query: 3 NDPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIG 62 +D DHGH+PVL R ELLAP+L G E VLVDATLGAGGH+E L FP LRL+G Sbjct: 10 DDRDHGHLPVLAARMAELLAPSLE----SGDERVLVDATLGAGGHAELMLNRFPNLRLVG 65 Query: 63 LDRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQLDQ 122 +DRD +ALAIA RLAP DR++L + R+D + LA+A + IDG LFDLGVSSMQLDQ Sbjct: 66 IDRDAHALAIAEKRLAPMADRISLHQARFDQLPQVLADAAIDGIDGALFDLGVSSMQLDQ 125 Query: 123 KQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRR 182 RGF+Y+ DAPLDMRM+ + LTAA+++NTY L R+L +YGEERFAGRIA ++ Sbjct: 126 PGRGFAYAIDAPLDMRMNDEDGLTAADVLNTYSHGELARVLSEYGEERFAGRIASAVIAE 185 Query: 183 RAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXX 242 R K+PFTT++ LV LLY+AIPA RRTGGHPAKRTFQALRI VN ELD+ Sbjct: 186 REKEPFTTSARLVALLYQAIPAATRRTGGHPAKRTFQALRIEVNHELDAIRAAVPAALDA 245 Query: 243 XXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQ 302 VM+YQSLEDRI+K+ F+T T S +P GLP+ELPG P F +TRGAER D Sbjct: 246 TRVGGRVAVMSYQSLEDRIIKREFATRTTSTSPRGLPVELPGTAPRFRLITRGAERPDAA 305 Query: 303 EIERNPRSAPVRLRALEKV 321 E+ERNPRSAPVR+R +E+V Sbjct: 306 ELERNPRSAPVRVRVIERV 324 >tr|C3JJ56|C3JJ56_RHOER Tax_Id=596309 (mraW)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-;[Rhodococcus erythropolis SK121] Length = 336 Score = 365 bits (938), Expect = 3e-99 Identities = 193/319 (60%), Positives = 224/319 (70%), Gaps = 3/319 (0%) Query: 9 HIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDPN 68 H+PVLL R +LL PA+T G A ++DATLG GGHSE FL +P L LIGLDRD N Sbjct: 16 HVPVLLHRADDLLGPAITAVGDGGAGAYMIDATLGLGGHSEFFLGKYPGLHLIGLDRDTN 75 Query: 69 ALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGV---RRIDGVLFDLGVSSMQLDQKQR 125 AL IA +RLAPF DR T V T YDGI AL +AG+ + +LFDLGVSSMQLD+ R Sbjct: 76 ALRIASERLAPFADRTTFVHTTYDGIEDALEQAGLPSTESVHAILFDLGVSSMQLDEADR 135 Query: 126 GFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAK 185 GF+YS DAPLDMRMD LTAAE++NTY L RIL YGEERFAG+IA +I+R+R + Sbjct: 136 GFAYSIDAPLDMRMDQTVGLTAAEVLNTYSHGDLARILSTYGEERFAGKIASEILRQRER 195 Query: 186 QPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXXX 245 +PFTT++ LVELLY IPA RRTGGHPAKRTFQALRI VNAELDS Sbjct: 196 EPFTTSAALVELLYRTIPAATRRTGGHPAKRTFQALRIEVNAELDSLRAAVPAGLDALAV 255 Query: 246 XXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEIE 305 V M+YQSLEDR+VK + S +P GLP+ELPG PEF +TRGAERA EQEIE Sbjct: 256 GGRVVFMSYQSLEDRVVKAELVPRSKSTSPEGLPVELPGMGPEFRILTRGAERASEQEIE 315 Query: 306 RNPRSAPVRLRALEKVGGR 324 NPRSAPVRLRA E++ R Sbjct: 316 ENPRSAPVRLRAAERISRR 334 >sp|C1A0Y3|RSMH_RHOE4 Tax_Id=234621 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Rhodococcus erythropolis] Length = 332 Score = 365 bits (937), Expect = 4e-99 Identities = 193/319 (60%), Positives = 224/319 (70%), Gaps = 3/319 (0%) Query: 9 HIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDPN 68 H+PVLL R +LL PA+T G A ++DATLG GGHSE FL +P L LIGLDRD N Sbjct: 12 HVPVLLHRADDLLGPAITAVGDGGEGAYMIDATLGLGGHSEFFLGKYPGLHLIGLDRDTN 71 Query: 69 ALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGV---RRIDGVLFDLGVSSMQLDQKQR 125 AL IA +RLAPF DR T V T YDGI AL +AG+ + +LFDLGVSSMQLD+ R Sbjct: 72 ALRIASERLAPFADRTTFVHTTYDGIEDALEQAGLPSTESVHAILFDLGVSSMQLDEADR 131 Query: 126 GFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAK 185 GF+YS DAPLDMRMD LTAAE++NTY L RIL YGEERFAG+IA +I+R+R + Sbjct: 132 GFAYSIDAPLDMRMDQTVGLTAAEVLNTYSHGDLARILSTYGEERFAGKIASEILRQRER 191 Query: 186 QPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXXX 245 +PFTT++ LVELLY IPA RRTGGHPAKRTFQALRI VNAELDS Sbjct: 192 EPFTTSAALVELLYRTIPAATRRTGGHPAKRTFQALRIEVNAELDSLRAAVPAGLDALAV 251 Query: 246 XXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEIE 305 V M+YQSLEDR+VK + S +P GLP+ELPG PEF +TRGAERA EQEIE Sbjct: 252 GGRVVFMSYQSLEDRVVKAELVPRSKSTSPEGLPVELPGMGPEFRILTRGAERASEQEIE 311 Query: 306 RNPRSAPVRLRALEKVGGR 324 NPRSAPVRLRA E++ R Sbjct: 312 ENPRSAPVRLRAAERISRR 330 >tr|C6WDF0|C6WDF0_ACTMD Tax_Id=446462 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-;[Actinosynnema mirum] Length = 316 Score = 360 bits (923), Expect = 2e-97 Identities = 190/313 (60%), Positives = 227/313 (72%), Gaps = 7/313 (2%) Query: 9 HIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDRDPN 68 H+PVLLDR + LLAPAL D +AV VD TLG GGHSE L P +RLIGLDRDP Sbjct: 7 HVPVLLDRVLGLLAPALAGRD----DAVFVDCTLGLGGHSEAVLKAHPGVRLIGLDRDPQ 62 Query: 69 ALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQLDQKQRGFS 128 A+A+A RLAPF DRV V+T YDGI A+ RR+DG+L DLGVSS+QLD ++RGF+ Sbjct: 63 AIALAKARLAPFADRVEFVQTTYDGIAEAVDG---RRVDGILMDLGVSSLQLDARERGFA 119 Query: 129 YSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAKQPF 188 YS DAPLDMRM + TAA+++NTY A L R+LRDYGEERFA +IA +VR RAK+PF Sbjct: 120 YSQDAPLDMRMSAGSGETAADVLNTYPAAELARVLRDYGEERFARKIAAAVVRERAKEPF 179 Query: 189 TTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXXXXXXXXXXXXX 248 TT+ LVELLY ++PA RRTGGHPAKRTFQALRI VN EL+S Sbjct: 180 TTSGRLVELLYASVPAATRRTGGHPAKRTFQALRIEVNRELESLRAALPAALSVLAVGGR 239 Query: 249 XVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAERADEQEIERNP 308 VV +YQSLEDR+VK+A + + ASRTP GLP+ELPGH PE +TRGAE A+E EIE NP Sbjct: 240 IVVESYQSLEDRMVKRALADLAASRTPVGLPVELPGHGPELTLLTRGAEVANESEIEDNP 299 Query: 309 RSAPVRLRALEKV 321 R+APVRLRA E++ Sbjct: 300 RAAPVRLRAAERI 312 >sp|Q4JWA3|RSMH_CORJK Tax_Id=306537 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Corynebacterium jeikeium] Length = 342 Score = 353 bits (905), Expect = 2e-95 Identities = 190/330 (57%), Positives = 228/330 (69%), Gaps = 11/330 (3%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 +HGH PV+ DR VEL+ + + V+VD TLGAGGHSE FL FP ++GLDR Sbjct: 4 EHGHTPVMRDRMVELVGLGVNSENAPA-RPVIVDGTLGAGGHSEAFLDAFPHAIVVGLDR 62 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAE--------AGVRR--IDGVLFDLGV 115 DPNALA A RLA FGDR +TR+DG+T AL + A VR I G LFDLGV Sbjct: 63 DPNALAEANARLARFGDRFVSYQTRFDGVTEALEDLMEQGKLPASVREHGISGFLFDLGV 122 Query: 116 SSMQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRI 175 SSMQLDQ +RGF+Y+ DAPLDMRMDP + LTAAEI+NTY + RIL+ YG+ERFAG+I Sbjct: 123 SSMQLDQPERGFAYAVDAPLDMRMDPSSPLTAAEILNTYSHGEIARILKTYGDERFAGKI 182 Query: 176 ADKIVRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXX 235 A +VR R KQPF ++ LVELLY IPA +RRTGGHPAKRTFQALR+ VNAEL+S Sbjct: 183 ASAVVREREKQPFENSARLVELLYATIPAASRRTGGHPAKRTFQALRVEVNAELESLENL 242 Query: 236 XXXXXXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRG 295 V M+YQSLED+IVK+A ++ S+TPPGLPMELPG E EF TRG Sbjct: 243 IPEISRWLHVGAVGVFMSYQSLEDKIVKKALVQLSTSKTPPGLPMELPGMEAEFELRTRG 302 Query: 296 AERADEQEIERNPRSAPVRLRALEKVGGRG 325 AE+A E EIE+N R+APVR+RA +V RG Sbjct: 303 AEKASEAEIEQNSRAAPVRVRAYSRVSDRG 332 >tr|C8RRH3|C8RRH3_CORJE Tax_Id=525262 (mraW)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-;[Corynebacterium jeikeium ATCC 43734] Length = 342 Score = 352 bits (904), Expect = 3e-95 Identities = 190/330 (57%), Positives = 228/330 (69%), Gaps = 11/330 (3%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 +HGHIPV+ DR VEL+ + + V+VD TLGAGGHSE FL FP ++GLDR Sbjct: 4 EHGHIPVMRDRMVELVGLGVNSENAPA-RPVIVDGTLGAGGHSEAFLDAFPHAIVVGLDR 62 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAE--------AGVRR--IDGVLFDLGV 115 DPNALA A RLA FGDR +TR+DG+T AL + A VR I G LFDLGV Sbjct: 63 DPNALAEANARLARFGDRFVSYQTRFDGVTEALEDLMEQGKLPASVREHGISGFLFDLGV 122 Query: 116 SSMQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRI 175 SSMQLDQ +RGF+Y+ DAPLDMRMDP + LTAAEI+NTY + RIL+ YG+ERFAG+I Sbjct: 123 SSMQLDQPERGFAYAVDAPLDMRMDPSSPLTAAEILNTYSHGEIARILKTYGDERFAGKI 182 Query: 176 ADKIVRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXX 235 A +VR R KQPF ++ LVELLY IPA +RRTGGHPAKRTFQALR+ VNAEL+S Sbjct: 183 ASAVVREREKQPFENSARLVELLYATIPAASRRTGGHPAKRTFQALRVEVNAELESLENL 242 Query: 236 XXXXXXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRG 295 V M+YQSLED+IVK+A ++ S+TPPGLPMELPG E EF T G Sbjct: 243 IPEISRWLHVGAVGVFMSYQSLEDKIVKKALVQLSTSKTPPGLPMELPGMEAEFELRTSG 302 Query: 296 AERADEQEIERNPRSAPVRLRALEKVGGRG 325 AE+A E EIE+N R+APVR+RA +V RG Sbjct: 303 AEKASEAEIEQNSRAAPVRVRAYSRVSDRG 332 >sp|Q8FNT2|RSMH_COREF Tax_Id=152794 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Corynebacterium efficiens] Length = 338 Score = 348 bits (894), Expect = 4e-94 Identities = 180/324 (55%), Positives = 227/324 (70%), Gaps = 11/324 (3%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 +HGH+PV+ DR L+A + G AV+VDATLGAGGH+E FLT FP +IGLDR Sbjct: 9 NHGHVPVMRDRMAALIADHVREM---GDRAVIVDATLGAGGHAEHFLTVFPEAHVIGLDR 65 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAE--------AGVRRIDGVLFDLGVSS 117 D NAL AG+RLA FGDR V+TR+DG++ LA A I G LFDLGVSS Sbjct: 66 DENALRDAGERLARFGDRFLGVKTRFDGLSQVLATGEGDILDLARKEGISGALFDLGVSS 125 Query: 118 MQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIAD 177 MQLDQ +RGF+Y DAPLDMRMDP +TAA+I+NTY + R+L+ YG+ERFAG+IA Sbjct: 126 MQLDQVERGFAYRTDAPLDMRMDPTQGITAADILNTYSHGDIARVLKTYGDERFAGKIAS 185 Query: 178 KIVRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXX 237 +++ R K+PFTT++ LVELLY+ IPA RRTGGHPAKRTFQALR+ VN EL+S Sbjct: 186 AVLKEREKEPFTTSARLVELLYDTIPAATRRTGGHPAKRTFQALRVEVNRELESLSNVLP 245 Query: 238 XXXXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAE 297 V M+YQS ED++VK+ F+ +T S+TPPGLP++LPG P F VTRGAE Sbjct: 246 QITDALNVGGRAVFMSYQSHEDKLVKRFFTELTTSKTPPGLPVDLPGTAPRFRQVTRGAE 305 Query: 298 RADEQEIERNPRSAPVRLRALEKV 321 A E EIE NPR+APV++RA+E++ Sbjct: 306 TASEAEIEENPRAAPVKVRAIERI 329 >tr|C8NQ20|C8NQ20_COREF Tax_Id=196164 (mraW)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-;[Corynebacterium efficiens YS-314] Length = 338 Score = 348 bits (894), Expect = 4e-94 Identities = 180/324 (55%), Positives = 227/324 (70%), Gaps = 11/324 (3%) Query: 6 DHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGLDR 65 +HGH+PV+ DR L+A + G AV+VDATLGAGGH+E FLT FP +IGLDR Sbjct: 9 NHGHVPVMRDRMAALIADHVREM---GDRAVIVDATLGAGGHAEHFLTVFPEAHVIGLDR 65 Query: 66 DPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAE--------AGVRRIDGVLFDLGVSS 117 D NAL AG+RLA FGDR V+TR+DG++ LA A I G LFDLGVSS Sbjct: 66 DENALRDAGERLARFGDRFLGVKTRFDGLSQVLATGEGDILDLARKEGISGALFDLGVSS 125 Query: 118 MQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIAD 177 MQLDQ +RGF+Y DAPLDMRMDP +TAA+I+NTY + R+L+ YG+ERFAG+IA Sbjct: 126 MQLDQVERGFAYRTDAPLDMRMDPTQGITAADILNTYSHGDIARVLKTYGDERFAGKIAS 185 Query: 178 KIVRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXXXX 237 +++ R K+PFTT++ LVELLY+ IPA RRTGGHPAKRTFQALR+ VN EL+S Sbjct: 186 AVLKEREKEPFTTSARLVELLYDTIPAATRRTGGHPAKRTFQALRVEVNRELESLSNVLP 245 Query: 238 XXXXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRGAE 297 V M+YQS ED++VK+ F+ +T S+TPPGLP++LPG P F VTRGAE Sbjct: 246 QITDALNVGGRAVFMSYQSHEDKLVKRFFTELTTSKTPPGLPVDLPGTAPRFRQVTRGAE 305 Query: 298 RADEQEIERNPRSAPVRLRALEKV 321 A E EIE NPR+APV++RA+E++ Sbjct: 306 TASEAEIEENPRAAPVKVRAIERI 329 >sp|Q8NNM7|RSMH_CORGL Tax_Id=1718 (rsmH)RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.-; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; AltName: Full=16S rRNA m(4)C1402 methyltransferase;[Corynebacterium glutamicum] Length = 337 Score = 348 bits (893), Expect = 5e-94 Identities = 183/327 (55%), Positives = 227/327 (69%), Gaps = 11/327 (3%) Query: 4 DPDHGHIPVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRLIGL 63 D +HGH+PV+ DR L+A + G AV+VDATLGAGGH+E FL FP RLIGL Sbjct: 7 DGNHGHVPVMRDRMAALIAE---HVEALGENAVIVDATLGAGGHAEFFLNTFPKARLIGL 63 Query: 64 DRDPNALAIAGDRLAPFGDRVTLVRTRYDGITSALAEAGVRRID--------GVLFDLGV 115 DRD NAL A RLAPFG+R V+TR+DG+ L ID G LFDLGV Sbjct: 64 DRDQNALRDARARLAPFGERFIGVQTRFDGLREVLESVEGDIIDLAREHGIAGALFDLGV 123 Query: 116 SSMQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRI 175 SSMQLDQ +RGF+Y DAPLDMRMD +TAA+I+NTY + RIL+ YG+ERFAG+I Sbjct: 124 SSMQLDQVERGFAYRTDAPLDMRMDATQGITAADILNTYSHGDIARILKTYGDERFAGKI 183 Query: 176 ADKIVRRRAKQPFTTTSELVELLYEAIPAPARRTGGHPAKRTFQALRIAVNAELDSXXXX 235 A +++ R K+PFTT++ LVELLY+AIPA RRTGGHPAKRTFQALR+ VN ELDS Sbjct: 184 ASAVLKEREKEPFTTSARLVELLYDAIPAATRRTGGHPAKRTFQALRVEVNNELDSLKNV 243 Query: 236 XXXXXXXXXXXXXXVVMAYQSLEDRIVKQAFSTVTASRTPPGLPMELPGHEPEFVAVTRG 295 V M+YQS ED++VK+ F+ +T S+TPPGLP++LPG P+F VTRG Sbjct: 244 LPQITDALNVGGRAVFMSYQSHEDKLVKKFFTDLTTSKTPPGLPVDLPGTAPQFKQVTRG 303 Query: 296 AERADEQEIERNPRSAPVRLRALEKVG 322 AE A E EIE NPR+APV++RA+E++G Sbjct: 304 AETASEAEIEENPRAAPVKVRAIERIG 330 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.319 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,519,422,014 Number of extensions: 99810764 Number of successful extensions: 264967 Number of sequences better than 10.0: 2381 Number of HSP's gapped: 257813 Number of HSP's successfully gapped: 2402 Length of query: 326 Length of database: 4,236,830,644 Length adjustment: 138 Effective length of query: 188 Effective length of database: 2,510,745,412 Effective search space: 472020137456 Effective search space used: 472020137456 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 81 (35.8 bits)