BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_4259 (672 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R047|A0R047_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 1242 0.0 tr|A3Q1Q1|A3Q1Q1_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 845 0.0 tr|Q1B6T8|Q1B6T8_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 843 0.0 tr|A1UI87|A1UI87_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 843 0.0 tr|A4TBH6|A4TBH6_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 816 0.0 tr|D5P703|D5P703_9MYCO Tax_Id=525368 SubName: Full=DNA polymeras... 796 0.0 tr|Q73YM5|Q73YM5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 792 0.0 tr|A0QF17|A0QF17_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 791 0.0 tr|B2HGV9|B2HGV9_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 753 0.0 tr|D5XUV5|D5XUV5_MYCTU Tax_Id=515617 SubName: Full=Putative unch... 726 0.0 tr|A2VJT2|A2VJT2_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 726 0.0 tr|D6FWL2|D6FWL2_MYCTU Tax_Id=611304 SubName: Full=Putative unch... 724 0.0 sp|Q10384|Y2191_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 723 0.0 tr|C6DPL7|C6DPL7_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 723 0.0 tr|A5WPG1|A5WPG1_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 723 0.0 tr|A5U4L9|A5U4L9_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 723 0.0 tr|D6G640|D6G640_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 723 0.0 tr|D6FI87|D6FI87_MYCTU Tax_Id=611303 SubName: Full=Putative unch... 723 0.0 tr|D6F5X2|D6F5X2_MYCTU Tax_Id=611302 SubName: Full=Putative unch... 723 0.0 tr|D5ZG88|D5ZG88_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 723 0.0 tr|D5YRZ8|D5YRZ8_MYCTU Tax_Id=515616 SubName: Full=DNA polymeras... 723 0.0 tr|D5YH20|D5YH20_MYCTU Tax_Id=520140 SubName: Full=Putative unch... 723 0.0 tr|Q7TYX5|Q7TYX5_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 722 0.0 tr|C1AQA6|C1AQA6_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 722 0.0 tr|A1KKN3|A1KKN3_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 722 0.0 tr|D5PP81|D5PP81_COREQ Tax_Id=525370 SubName: Full=DNA polymeras... 641 0.0 tr|B1MP02|B1MP02_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA ... 638 0.0 tr|Q0SHN3|Q0SHN3_RHOSR Tax_Id=101510 SubName: Full=DNA-directed ... 629 e-178 tr|C1AU93|C1AU93_RHOOB Tax_Id=632772 (dnaQ)SubName: Full=Putativ... 627 e-177 tr|C3JJ89|C3JJ89_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 627 e-177 tr|Q5YZ23|Q5YZ23_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p... 625 e-177 tr|C1A114|C1A114_RHOE4 Tax_Id=234621 (dnaQ)SubName: Full=Putativ... 625 e-177 tr|A4FAD3|A4FAD3_SACEN Tax_Id=405948 SubName: Full=DNA polymeras... 590 e-166 tr|C7MZ07|C7MZ07_SACVD Tax_Id=471857 SubName: Full=Exonuclease, ... 578 e-163 tr|D5USL5|D5USL5_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 566 e-159 tr|D0LAW5|D0LAW5_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 563 e-158 tr|C6W9G7|C6W9G7_ACTMD Tax_Id=446462 SubName: Full=DNA polymeras... 552 e-155 tr|C8XCX1|C8XCX1_NAKMY Tax_Id=479431 SubName: Full=DNA polymeras... 513 e-143 tr|D5UFG9|D5UFG9_9CELL Tax_Id=446466 SubName: Full=DNA polymeras... 487 e-135 tr|D1A8X2|D1A8X2_THECD Tax_Id=471852 SubName: Full=DNA polymeras... 479 e-133 tr|D1SDJ6|D1SDJ6_9ACTO Tax_Id=644283 SubName: Full=DNA polymeras... 477 e-132 tr|D3C9W5|D3C9W5_9ACTO Tax_Id=648999 SubName: Full=DNA polymeras... 475 e-132 tr|D3D8I8|D3D8I8_9ACTO Tax_Id=102897 SubName: Full=DNA polymeras... 475 e-131 tr|Q0RFJ5|Q0RFJ5_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-... 474 e-131 tr|C5C5G5|C5C5G5_BEUC1 Tax_Id=471853 SubName: Full=DNA polymeras... 473 e-131 >tr|A0R047|A0R047_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase III, epsilon subunit;[Mycobacterium smegmatis] Length = 672 Score = 1242 bits (3214), Expect = 0.0 Identities = 635/672 (94%), Positives = 635/672 (94%) Query: 1 MTVLSIGVCATVSPATDKPSTVAIATPSDPSGAARRAMSVGFPNVIAMSQRSTAVGAQLS 60 MTVLSIGVCATVSPATDKPSTVAIATPSDPSGAARRAMSVGFPNVIAMSQRSTAVGAQLS Sbjct: 1 MTVLSIGVCATVSPATDKPSTVAIATPSDPSGAARRAMSVGFPNVIAMSQRSTAVGAQLS 60 Query: 61 LDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATL 120 LDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATL Sbjct: 61 LDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATL 120 Query: 121 VDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAA 180 VDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAA Sbjct: 121 VDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAA 180 Query: 181 ERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDV 240 ERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDV Sbjct: 181 ERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDV 240 Query: 241 LHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVG 300 LHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVG Sbjct: 241 LHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVG 300 Query: 301 TAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNR 360 TAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNR Sbjct: 301 TAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNR 360 Query: 361 RSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTS 420 RSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTS Sbjct: 361 RSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTS 420 Query: 421 RFGATGIHRCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAA 480 RFGATGIHRCPERELSPCPATQS SAVLADVLMHIEKLAA Sbjct: 421 RFGATGIHRCPERELSPCPATQSAGADEYAAAARRAADLIDGADSAVLADVLMHIEKLAA 480 Query: 481 DSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGA 540 DSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGA Sbjct: 481 DSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGA 540 Query: 541 GTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTD 600 GTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTD Sbjct: 541 GTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTD 600 Query: 601 MGWATPIGAAGXXXXXXXXXXXXXXXXLQDRSELLTEPHPTREQLFGRTGVDGLDGTRET 660 MGWATPIGAAG LQDRSELLTEPHPTREQLFGRTGVDGLDGTRET Sbjct: 601 MGWATPIGAAGRYAQWAATARSARLAALQDRSELLTEPHPTREQLFGRTGVDGLDGTRET 660 Query: 661 GLPRRKPLSVAG 672 GLPRRKPLSVAG Sbjct: 661 GLPRRKPLSVAG 672 >tr|A3Q1Q1|A3Q1Q1_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 630 Score = 845 bits (2183), Expect = 0.0 Identities = 451/627 (71%), Positives = 481/627 (76%), Gaps = 23/627 (3%) Query: 58 QLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGEL 117 QLS DME +SL DTTFVVVDLETTGGRA P DAITEIGAVKVRGGEVLGEL Sbjct: 15 QLSFDMEA---LSLRDTTFVVVDLETTGGRATGERP----DAITEIGAVKVRGGEVLGEL 67 Query: 118 ATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLR 177 ATLVDPGRAIPPQIV LTGITTAMV APRI++VLP FLEFARG+VLVAHNAGFDIGFLR Sbjct: 68 ATLVDPGRAIPPQIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAGFDIGFLR 127 Query: 178 AAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARAT 237 AAAE+ LTWPRPPVLCTVKLARRVLTRDEAPSVRLS LA+LF A TTPTHRALDDARAT Sbjct: 128 AAAEQCGLTWPRPPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRALDDARAT 187 Query: 238 VDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVL 297 VDVLHGLIER+GNQGVHT DLRAYLPD TPAQRRNR LADGLP+RPGVYLFRGP DEVL Sbjct: 188 VDVLHGLIERIGNQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFRGPGDEVL 247 Query: 298 YVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPP 357 Y+GTAVDLRRRV QYFTGADPRARMKEMASLATRVDHVECAH+LEAGVRELRLLAAHAPP Sbjct: 248 YIGTAVDLRRRVGQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRLLAAHAPP 307 Query: 358 YNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRT 417 YNRRSK P+RWWWV LTDEPFPR S VR PRH A+GPF AR+DAV+TA+LLARFTGVRT Sbjct: 308 YNRRSKFPQRWWWVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLARFTGVRT 367 Query: 418 CTSRFGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHI 475 CT+R H C ERELSPCPA + A LA V+ I Sbjct: 368 CTARLARAARHGAACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAALAAVVDGI 427 Query: 476 EKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYG 535 LAA +RYE AAR+RDHAA ID LWRGQRL+ L ELVAAR DG+GGW AVVRYG Sbjct: 428 AALAAVNRYESAARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWDLAVVRYG 487 Query: 536 QLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRT 595 +LA AG ARRGVPPMPVVDA+ AAAQ V+P PLGGALVEET LIARWL +P VRIVR Sbjct: 488 RLAAAGCARRGVPPMPVVDALTAAAQTVLPDPAPLGGALVEETGLIARWLTSPGVRIVR- 546 Query: 596 AGQTDMGWATPIGAAGXXXXXXXXXXXXXXXXLQD----------RSELLTEPHPTREQL 645 + G+ATPIGAAG Q SELL EPHPTREQL Sbjct: 547 ---CEPGYATPIGAAGRWLGWADTARSARLAAEQTGADARTRESVPSELLGEPHPTREQL 603 Query: 646 FGRTGVDGLDGTRETGLPRRKPLSVAG 672 FGRTGV+GL + LP R P VAG Sbjct: 604 FGRTGVNGLGRPGQARLPGRHPFGVAG 630 >tr|Q1B6T8|Q1B6T8_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 630 Score = 843 bits (2179), Expect = 0.0 Identities = 450/627 (71%), Positives = 479/627 (76%), Gaps = 23/627 (3%) Query: 58 QLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGEL 117 QLS DME +SL DTTFVVVDLETTGGRA P DAITEIGAVKVRGGEVLGEL Sbjct: 15 QLSFDMEA---LSLRDTTFVVVDLETTGGRATGERP----DAITEIGAVKVRGGEVLGEL 67 Query: 118 ATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLR 177 ATLVDPGRAIPPQIV LTGITTAMV APRI++VLP FLEFARG+VLVAHNAGFDIGFLR Sbjct: 68 ATLVDPGRAIPPQIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAGFDIGFLR 127 Query: 178 AAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARAT 237 AAAE+ LTWPRPPVLCTVKLARRVLTRDEAPSVRLS LA+LF A TTPTHRALDDARAT Sbjct: 128 AAAEQCALTWPRPPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRALDDARAT 187 Query: 238 VDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVL 297 VDVLHGLIER+GNQGVHT DLRAYLPD TPAQRRNR LADGLP+RPGVYLFRGP DEVL Sbjct: 188 VDVLHGLIERIGNQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFRGPGDEVL 247 Query: 298 YVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPP 357 Y+GTAVDLRRRV QYFTGADPRARMKEMASLATRVDHVECAH+LEAGVRELRLLAAHAPP Sbjct: 248 YIGTAVDLRRRVGQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRLLAAHAPP 307 Query: 358 YNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRT 417 YNRRSK P+RWWWV LTDEPFPR S VR PRH A+GPF AR+DAV+TA+LLARFTGVRT Sbjct: 308 YNRRSKFPQRWWWVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLARFTGVRT 367 Query: 418 CTSRFGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHI 475 CT+R H C ERELSPCPA + A LA V+ I Sbjct: 368 CTARLARAARHGAACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAALAAVVDGI 427 Query: 476 EKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYG 535 LAA +RYE AAR+RDHAA ID LWRGQRL+ L ELVAAR DG+GGW AVVRYG Sbjct: 428 AALAAVNRYESAARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWDLAVVRYG 487 Query: 536 QLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRT 595 +LA AG ARRGVPPMPVVDA+ AAAQ V+P PLGGALVEET LI RWL +P VRIVR Sbjct: 488 RLAAAGCARRGVPPMPVVDALTAAAQTVLPDPAPLGGALVEETGLITRWLTSPGVRIVR- 546 Query: 596 AGQTDMGWATPIGAAGXXXXXXXXXXXXXXXXLQD----------RSELLTEPHPTREQL 645 + G+ATPIGAAG Q SELL EPHPTREQL Sbjct: 547 ---CEPGYATPIGAAGRWLGWADTARSARLAAEQTGADARTRESVPSELLGEPHPTREQL 603 Query: 646 FGRTGVDGLDGTRETGLPRRKPLSVAG 672 FGR GVDGL + LP R P VAG Sbjct: 604 FGRPGVDGLGRPGQARLPGRHPFGVAG 630 >tr|A1UI87|A1UI87_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 630 Score = 843 bits (2179), Expect = 0.0 Identities = 450/627 (71%), Positives = 479/627 (76%), Gaps = 23/627 (3%) Query: 58 QLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGEL 117 QLS DME +SL DTTFVVVDLETTGGRA P DAITEIGAVKVRGGEVLGEL Sbjct: 15 QLSFDMEA---LSLRDTTFVVVDLETTGGRATGERP----DAITEIGAVKVRGGEVLGEL 67 Query: 118 ATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLR 177 ATLVDPGRAIPPQIV LTGITTAMV APRI++VLP FLEFARG+VLVAHNAGFDIGFLR Sbjct: 68 ATLVDPGRAIPPQIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAGFDIGFLR 127 Query: 178 AAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARAT 237 AAAE+ LTWPRPPVLCTVKLARRVLTRDEAPSVRLS LA+LF A TTPTHRALDDARAT Sbjct: 128 AAAEQCALTWPRPPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRALDDARAT 187 Query: 238 VDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVL 297 VDVLHGLIER+GNQGVHT DLRAYLPD TPAQRRNR LADGLP+RPGVYLFRGP DEVL Sbjct: 188 VDVLHGLIERIGNQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFRGPGDEVL 247 Query: 298 YVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPP 357 Y+GTAVDLRRRV QYFTGADPRARMKEMASLATRVDHVECAH+LEAGVRELRLLAAHAPP Sbjct: 248 YIGTAVDLRRRVGQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRLLAAHAPP 307 Query: 358 YNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRT 417 YNRRSK P+RWWWV LTDEPFPR S VR PRH A+GPF AR+DAV+TA+LLARFTGVRT Sbjct: 308 YNRRSKFPQRWWWVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLARFTGVRT 367 Query: 418 CTSRFGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHI 475 CT+R H C ERELSPCPA + A LA V+ I Sbjct: 368 CTARLARAARHGAACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAALAAVVDGI 427 Query: 476 EKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYG 535 LAA +RYE AAR+RDHAA ID LWRGQRL+ L ELVAAR DG+GGW AVVRYG Sbjct: 428 AALAAVNRYESAARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWDLAVVRYG 487 Query: 536 QLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRT 595 +LA AG ARRGVPPMPVVDA+ AAAQ V+P PLGGALVEET LI RWL +P VRIVR Sbjct: 488 RLAAAGCARRGVPPMPVVDALTAAAQTVLPDPAPLGGALVEETGLITRWLTSPGVRIVR- 546 Query: 596 AGQTDMGWATPIGAAGXXXXXXXXXXXXXXXXLQD----------RSELLTEPHPTREQL 645 + G+ATPIGAAG Q SELL EPHPTREQL Sbjct: 547 ---CEPGYATPIGAAGRWLGWADTARSARLAAEQTGADARTRESVPSELLGEPHPTREQL 603 Query: 646 FGRTGVDGLDGTRETGLPRRKPLSVAG 672 FGR GVDGL + LP R P VAG Sbjct: 604 FGRPGVDGLGRPGQARLPGRHPFGVAG 630 >tr|A4TBH6|A4TBH6_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 617 Score = 816 bits (2109), Expect = 0.0 Identities = 436/623 (69%), Positives = 470/623 (75%), Gaps = 16/623 (2%) Query: 58 QLSL-DMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGE 116 QLS D++ D +L +TTFVVVDLETTGGRA G DAITEIGAVKVRGGEVLGE Sbjct: 3 QLSFSDVDPRADPTLRETTFVVVDLETTGGRAS----GDRHDAITEIGAVKVRGGEVLGE 58 Query: 117 LATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFL 176 ATLVDPGRAIPPQIV LTGIT+AMV DAPRI++VLP FLEF RGAVLVAHNAGFD+GFL Sbjct: 59 FATLVDPGRAIPPQIVALTGITSAMVYDAPRIESVLPSFLEFCRGAVLVAHNAGFDMGFL 118 Query: 177 RAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARA 236 RAAAER Q+ WP+PPVLCTV LARRVLTRDEAPSV+LS LARLFGASTTPTHRALDDARA Sbjct: 119 RAAAERNQVPWPKPPVLCTVALARRVLTRDEAPSVKLSALARLFGASTTPTHRALDDARA 178 Query: 237 TVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEV 296 TVDVLH LIERVGNQGVHT A+LRAYLPD TPAQRR R LA LP PGVYLFRGPS EV Sbjct: 179 TVDVLHALIERVGNQGVHTYAELRAYLPDVTPAQRRKRHLAHSLPRSPGVYLFRGPSAEV 238 Query: 297 LYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAP 356 LYVGTAVDLRRRV QYF GADPR RMKEMASLAT VDHVECAHDLEAGVRELRLLAAHAP Sbjct: 239 LYVGTAVDLRRRVGQYFNGADPRTRMKEMASLATAVDHVECAHDLEAGVRELRLLAAHAP 298 Query: 357 PYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVR 416 PYNRRSK P RWWWV LTDEPFPR S VR PR A+GPF +R++A + A L+ARFTGVR Sbjct: 299 PYNRRSKFPHRWWWVTLTDEPFPRFSTVRTPRTDSAVGPFRSRAEAFDAAALMARFTGVR 358 Query: 417 TCTSRFGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMH 474 TCT+R G H CPERE+SPCPA + LA L H Sbjct: 359 TCTNRLGRKAFHGPTCPEREVSPCPAVRDADAQTYAAAVADARALIDGRDGRPLAAALSH 418 Query: 475 IEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRY 534 I LA +RYE AAR+RDHAA ID LWRGQRL+ L+++PELVAA+ DG+ GWH AVVR+ Sbjct: 419 IADLAERNRYETAARLRDHAAATIDVLWRGQRLRALSTIPELVAAKPDGDRGWHLAVVRH 478 Query: 535 GQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVR 594 GQLA AG A RGVPPMPVVDA+ AAAQ V+P PLGGALVEETALIARWL VRIVR Sbjct: 479 GQLASAGVAPRGVPPMPVVDALTAAAQSVLPGPGPLGGALVEETALIARWLGQAGVRIVR 538 Query: 595 TAGQTDMGWATPIGAAGXXXXXXXXXXXXXXXXLQDR-----SELLTEPHPTREQLFGRT 649 D G+ +PI AAG Q SELL EPHPTREQLFGR Sbjct: 539 ----ADAGYCSPIAAAGRWAHWAATARSARLAAEQLSASRLGSELLGEPHPTREQLFGRP 594 Query: 650 GVDGLDGTRETGLPRRKPLSVAG 672 GVD L RETGLPR PL VAG Sbjct: 595 GVDRLLRPRETGLPRGNPLGVAG 617 >tr|D5P703|D5P703_9MYCO Tax_Id=525368 SubName: Full=DNA polymerase III epsilon subunit; EC=2.7.7.7;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 648 Score = 796 bits (2057), Expect = 0.0 Identities = 425/649 (65%), Positives = 474/649 (73%), Gaps = 15/649 (2%) Query: 38 MSVGFPNVIAMSQRSTAV--GAQLSLDMELERD--VSLADTTFVVVDLETTGGRAKATAP 93 MSV NV AM A+L D VSL DTTFVVVDLETTGGR KAT Sbjct: 1 MSVAGLNVAAMGAGGATQLSFAELGSSFAAAADDGVSLRDTTFVVVDLETTGGRTKATG- 59 Query: 94 GGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLP 153 G DAITEIGAVKVRGG VLGE ATLVDP R+IPPQIV LTGITTAMV DAPRIDAVLP Sbjct: 60 GNAPDAITEIGAVKVRGGVVLGEFATLVDPERSIPPQIVRLTGITTAMVSDAPRIDAVLP 119 Query: 154 MFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRL 213 MFLEFA AVLVAHNAGFDIGFLRAAA R + WPRP VLCTV+LARRVL+R+EAPSVRL Sbjct: 120 MFLEFAGDAVLVAHNAGFDIGFLRAAAARCDIAWPRPKVLCTVRLARRVLSREEAPSVRL 179 Query: 214 SELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRN 273 LARLF + PTHRALDDARATV+VLH LIERVGNQGVHT ADLR+YLPD TP QRR Sbjct: 180 GALARLFAVAAQPTHRALDDARATVEVLHALIERVGNQGVHTYADLRSYLPDVTPTQRRK 239 Query: 274 RALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVD 333 R LA+GLP RPGVYLFRGPS EVLYVGTAVDLRRRV QYFTGADPR RMKEM +LAT VD Sbjct: 240 RVLAEGLPRRPGVYLFRGPSGEVLYVGTAVDLRRRVGQYFTGADPRGRMKEMVNLATAVD 299 Query: 334 HVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAI 393 HVECAH LEAGVRELRLLAAHAPPYNRRS+ P RWWWVALTDE FPRL+ VR PRH +A+ Sbjct: 300 HVECAHALEAGVRELRLLAAHAPPYNRRSRFPHRWWWVALTDEAFPRLAVVRAPRHDRAV 359 Query: 394 GPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXXXXX 451 GPF +R+DA +TA LLARFTG+RTCT+R G T +H C E E+SPCPA ++ Sbjct: 360 GPFRSRADAADTAALLARFTGLRTCTARLGRTVLHGPACAEAEVSPCPAARNITATQYAA 419 Query: 452 XXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLT 511 +A L+ + + LA R+E AAR+RD A A++ LWRGQRL+TL Sbjct: 420 AVARVAALIDGMDNAALSAAVDQVTALAERRRFENAARLRDRTATAVEILWRGQRLRTLA 479 Query: 512 SLPELVAARRDGNGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLG 571 +LPEL+AA DG GG+H AVVR+GQLA +G+ARRGVPPMPVVDAI A AQ ++PTA PLG Sbjct: 480 TLPELIAAAPDGEGGYHLAVVRHGQLAASGSARRGVPPMPVVDAIVAGAQAILPTAAPLG 539 Query: 572 GALVEETALIARWLAAPDVRIVRTAGQTD-MGWATPIGAAG-------XXXXXXXXXXXX 623 GALVEE+ALIARWLA P VRIVR D GWA+P+ +AG Sbjct: 540 GALVEESALIARWLAGPGVRIVRVDDSPDAAGWASPLRSAGPWAQWAATARSARLAYEQI 599 Query: 624 XXXXLQDRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q S LL EPHP+REQLFG G+D G + LPRR+P S AG Sbjct: 600 AAQAAQHDSHLLAEPHPSREQLFGGAGIDRRAGAPQPVLPRRQPFSAAG 648 >tr|Q73YM5|Q73YM5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 643 Score = 792 bits (2046), Expect = 0.0 Identities = 415/616 (67%), Positives = 465/616 (75%), Gaps = 15/616 (2%) Query: 68 DVSLADTTFVVVDLETTGGRAKAT---APGGLCDAITEIGAVKVRGGEVLGELATLVDPG 124 +V+L DTTFVVVDLETTGGR+ +T AP DAITEIGAVKVRGG VLGE ATLVDP Sbjct: 32 EVALRDTTFVVVDLETTGGRSTSTEETAP----DAITEIGAVKVRGGVVLGEFATLVDPQ 87 Query: 125 RAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFA---RGAVLVAHNAGFDIGFLRAAAE 181 R+IPPQI+ LTGITTAMV DAP IDAVLPMFLEFA RGAVLVAHNAGFD+GFLRAAA+ Sbjct: 88 RSIPPQIMRLTGITTAMVSDAPAIDAVLPMFLEFAGLDRGAVLVAHNAGFDVGFLRAAAQ 147 Query: 182 RTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVL 241 + + WPRP VLCTV+LARRVL+R+EAPSVRL+ LARLF +T PTHRALDDARATVDVL Sbjct: 148 QCDIAWPRPRVLCTVRLARRVLSREEAPSVRLASLARLFAVTTQPTHRALDDARATVDVL 207 Query: 242 HGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGT 301 H LIERVGNQGVHT ADLR YLPD TP QRR R LA+GLP RPGVYLFRGPS EVLY+GT Sbjct: 208 HALIERVGNQGVHTYADLRGYLPDVTPTQRRKRVLAEGLPRRPGVYLFRGPSGEVLYIGT 267 Query: 302 AVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRR 361 AVDLRRRV QYFTGADPR RMKEM +LA VDHVECAH LEAGVRELRLLAAHAPPYNRR Sbjct: 268 AVDLRRRVAQYFTGADPRGRMKEMVALAGAVDHVECAHALEAGVRELRLLAAHAPPYNRR 327 Query: 362 SKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSR 421 S+ P+RWWWVALTDE +PRL+ VR PRH +A+GPF AR+DA +TA+LLARF G+RTCT+R Sbjct: 328 SRFPQRWWWVALTDEAYPRLAVVRAPRHDRAVGPFRARADAADTAELLARFAGLRTCTNR 387 Query: 422 FGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLA 479 G +H CPE E++PCPA + ++ LA + + LA Sbjct: 388 LGRAALHGPLCPEAEVAPCPAARGVTATQYAAAVARVAALIDGADNSALAAAVDQVAALA 447 Query: 480 ADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAG 539 +E AAR+RD A A++TLWRGQRL+ L SLPELVAA DG GG+ AVVRYG+LA Sbjct: 448 ERRHFESAARLRDRTATAVETLWRGQRLRALASLPELVAAAPDGQGGYQLAVVRYGRLAA 507 Query: 540 AGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQT 599 AG ARRGVPPMPVVDAI AAAQ + P PLGGALVEETALIARWL AP VRIVR G Sbjct: 508 AGNARRGVPPMPVVDAITAAAQAIWPEPGPLGGALVEETALIARWLEAPGVRIVRVKGTP 567 Query: 600 D-MGWATPIGAAGXXXXXXXXXXXXXXXXLQ--DRSELLTEPHPTREQLFGRTGVDGLDG 656 D GWA+P+ +AG Q SELLTEPHPTREQLFGR GVDG G Sbjct: 568 DAAGWASPLRSAGAWAAWAAAARSARLASEQALRASELLTEPHPTREQLFGRAGVDGGAG 627 Query: 657 TRETGLPRRKPLSVAG 672 + LP R+P AG Sbjct: 628 AGQPVLPGRQPFGAAG 643 >tr|A0QF17|A0QF17_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase III, epsilon subunit;[Mycobacterium avium] Length = 643 Score = 791 bits (2042), Expect = 0.0 Identities = 413/613 (67%), Positives = 462/613 (75%), Gaps = 9/613 (1%) Query: 68 DVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAI 127 +V+L DTTFVVVDLETTGGR+ +T DAITEIGAVKVR G VLGE ATLVDP R+I Sbjct: 32 EVALRDTTFVVVDLETTGGRSTSTGETAP-DAITEIGAVKVRDGVVLGEFATLVDPQRSI 90 Query: 128 PPQIVELTGITTAMVRDAPRIDAVLPMFLEFA---RGAVLVAHNAGFDIGFLRAAAERTQ 184 PPQI+ LTGITTAMV DAP IDAVLPMFLEFA RGAVLVAHNAGFD+GFLRAAA++ Sbjct: 91 PPQIMRLTGITTAMVSDAPAIDAVLPMFLEFAGLDRGAVLVAHNAGFDVGFLRAAAQQCD 150 Query: 185 LTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGL 244 + WPRP VLCTV+LARRVL+R+EAPSVRL+ LARLF +T PTHRALDDARATVDVLH L Sbjct: 151 IAWPRPRVLCTVRLARRVLSREEAPSVRLASLARLFAVTTQPTHRALDDARATVDVLHAL 210 Query: 245 IERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVD 304 IERVGNQGVHT ADLR YLPD TPAQRR R LA+GLP RPGVYLFRGPS EVLY+GTAVD Sbjct: 211 IERVGNQGVHTYADLRGYLPDVTPAQRRKRVLAEGLPRRPGVYLFRGPSGEVLYIGTAVD 270 Query: 305 LRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKA 364 LRRRV QYFTGADPR RMKEM +LA VDHVECAH LEAGVRELRLLAAHAPPYNRRS+ Sbjct: 271 LRRRVAQYFTGADPRGRMKEMVALAGAVDHVECAHALEAGVRELRLLAAHAPPYNRRSRF 330 Query: 365 PKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGA 424 P+RWWWVALTDE FPRL+ VR PRH +A+GPF AR+DA +TA+LLARF G+RTCT+R G Sbjct: 331 PQRWWWVALTDEAFPRLAVVRAPRHDRAVGPFRARADAADTAELLARFAGLRTCTNRLGR 390 Query: 425 TGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADS 482 +H CPE E++PCPA + ++ LA + + LA Sbjct: 391 AALHGPLCPEAEVAPCPAARGVTATQYAAAVARVAALIDGADNSALAAAVDQVAALAERR 450 Query: 483 RYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGAGT 542 +E AAR+RD A A++ LWRGQRL+ L SLPELVAA DG GG+ AVVRYG+LA AG Sbjct: 451 HFESAARLRDRTATAVEVLWRGQRLRVLASLPELVAAAPDGQGGYQLAVVRYGRLAAAGN 510 Query: 543 ARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTD-M 601 ARRGVPPMPVVDAI AAAQ + P PLGGALVEETALIARWL AP VRIVR G D Sbjct: 511 ARRGVPPMPVVDAITAAAQAIWPEPGPLGGALVEETALIARWLEAPGVRIVRVEGTQDAA 570 Query: 602 GWATPIGAAGXXXXXXXXXXXXXXXXLQ--DRSELLTEPHPTREQLFGRTGVDGLDGTRE 659 GWA+P+ +AG Q SELLTEPHPTREQLFGR GVDG G + Sbjct: 571 GWASPLRSAGAWAAWAAAARSARLASEQALRASELLTEPHPTREQLFGRAGVDGGTGAGQ 630 Query: 660 TGLPRRKPLSVAG 672 LP R+P AG Sbjct: 631 PVLPGRQPFGAAG 643 >tr|B2HGV9|B2HGV9_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 674 Score = 753 bits (1943), Expect = 0.0 Identities = 409/678 (60%), Positives = 463/678 (68%), Gaps = 47/678 (6%) Query: 38 MSVGFPNVIAMSQRSTAVGAQLSL---------DMELER------------DVSLADTTF 76 MSV PNV AM G QLSL D+ L DVSL +TTF Sbjct: 1 MSVRVPNVTAMGATG---GTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTF 57 Query: 77 VVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTG 136 VVVDLETTGGRA T DAITEIGAVKVRGG +LGE ATLVDP R+IPPQIV LTG Sbjct: 58 VVVDLETTGGRATGTEASPP-DAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTG 116 Query: 137 ITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTV 196 ITTAM+ DAP ID+VLPMF EF +VLVAHNAGFDIGFLRAAA R + WP VLCTV Sbjct: 117 ITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTV 176 Query: 197 KLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTL 256 +LARRVL+R+EAPSVRL+ LARLF +T PTHRALDDARATV+VLH LIERVGNQGVH+ Sbjct: 177 RLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSY 236 Query: 257 ADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGA 316 A+LRAYLP TPAQRR R LADGLP+RPG+YLFRGPS EVLYVGTAVDLRRRV QYF GA Sbjct: 237 AELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGA 296 Query: 317 DPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDE 376 D R RMKEM +LA VDHVECAH LEAGVRELR+LAAHAPPYNRRS+ P RWWWV LTDE Sbjct: 297 DSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDE 356 Query: 377 PFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERE 434 FPRLS VR PRH + +GPF +R+DA ETA LLARFTGVRTCT R + +H CPE E Sbjct: 357 AFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELE 416 Query: 435 LSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHA 494 +S CPAT++ + L + + LA RYE AAR+RDH Sbjct: 417 VSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHI 476 Query: 495 AVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGAGTARRGVPPMPVVD 554 A A++ LWRGQRL+ L +LPELVAA DG GG+ FAV+R+GQLA AG +RRG PPMPVVD Sbjct: 477 ATAVEVLWRGQRLRALVALPELVAAAPDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVD 536 Query: 555 AICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQT-------DMGWATPI 607 A+ A AQ ++P PLGGALVEETALIARWLA P VRIVR G GW +P+ Sbjct: 537 ALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPL 596 Query: 608 GAAGXXXXXXXXXXXXXXXXLQ-------------DRSELLTEPHPTREQLFGRTGVDGL 654 +AG Q +S++L EPHP+REQL GRT VD Sbjct: 597 RSAGPWAAWAAAARSARLAAEQVSQGDPRGRPDGGRQSDVLAEPHPSREQLLGRTAVDSH 656 Query: 655 DGTRETGLPRRKPLSVAG 672 G + LP +P S AG Sbjct: 657 RGALQPVLPGGEPFSAAG 674 >tr|D5XUV5|D5XUV5_MYCTU Tax_Id=515617 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T92] Length = 647 Score = 726 bits (1875), Expect = 0.0 Identities = 400/655 (61%), Positives = 459/655 (70%), Gaps = 28/655 (4%) Query: 38 MSVGFPNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRA 88 MSV PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR Sbjct: 1 MSVQGPNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRT 57 Query: 89 K---ATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDA 145 AT P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +A Sbjct: 58 TGNDATPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 113 Query: 146 PRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTR 205 P IDAVLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+R Sbjct: 114 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 173 Query: 206 DEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPD 265 DEAPSVRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ Sbjct: 174 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 233 Query: 266 TTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEM 325 T AQR R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM Sbjct: 234 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 293 Query: 326 ASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVR 385 LA+ +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R Sbjct: 294 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 353 Query: 386 DPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQS 443 PRH + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 354 APRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 413 Query: 444 XXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWR 503 +A LA + + +LA RYE AAR+RDH A AI+ LW Sbjct: 414 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 473 Query: 504 GQRLQTLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQ 561 GQRL+ L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ Sbjct: 474 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 533 Query: 562 VVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXX 621 ++PT PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 534 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATAR 592 Query: 622 XXXXXXLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 593 SAQLAGEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 647 >tr|A2VJT2|A2VJT2_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 647 Score = 726 bits (1875), Expect = 0.0 Identities = 400/655 (61%), Positives = 459/655 (70%), Gaps = 28/655 (4%) Query: 38 MSVGFPNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRA 88 MSV PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR Sbjct: 1 MSVQGPNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRT 57 Query: 89 K---ATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDA 145 AT P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +A Sbjct: 58 TGNDATPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 113 Query: 146 PRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTR 205 P IDAVLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+R Sbjct: 114 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 173 Query: 206 DEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPD 265 DEAPSVRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ Sbjct: 174 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 233 Query: 266 TTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEM 325 T AQR R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM Sbjct: 234 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 293 Query: 326 ASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVR 385 LA+ +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R Sbjct: 294 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 353 Query: 386 DPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQS 443 PRH + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 354 APRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 413 Query: 444 XXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWR 503 +A LA + + +LA RYE AAR+RDH A AI+ LW Sbjct: 414 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 473 Query: 504 GQRLQTLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQ 561 GQRL+ L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ Sbjct: 474 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 533 Query: 562 VVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXX 621 ++PT PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 534 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATAR 592 Query: 622 XXXXXXLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 593 SAQLAGEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 647 >tr|D6FWL2|D6FWL2_MYCTU Tax_Id=611304 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis K85] Length = 645 Score = 724 bits (1869), Expect = 0.0 Identities = 397/650 (61%), Positives = 457/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL++TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLSETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >sp|Q10384|Y2191_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv2191/MT2247;[Mycobacterium tuberculosis] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|C6DPL7|C6DPL7_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|A5WPG1|A5WPG1_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|A5U4L9|A5U4L9_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|D6G640|D6G640_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|D6FI87|D6FI87_MYCTU Tax_Id=611303 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis CPHL_A] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|D6F5X2|D6F5X2_MYCTU Tax_Id=611302 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T46] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|D5ZG88|D5ZG88_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|D5YRZ8|D5YRZ8_MYCTU Tax_Id=515616 SubName: Full=DNA polymerase III, epsilon subunit;[Mycobacterium tuberculosis 02_1987] Length = 645 Score = 723 bits (1867), Expect = 0.0 Identities = 397/650 (61%), Positives = 456/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ETA LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|D5YH20|D5YH20_MYCTU Tax_Id=520140 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis EAS054] Length = 637 Score = 723 bits (1866), Expect = 0.0 Identities = 387/616 (62%), Positives = 444/616 (72%), Gaps = 16/616 (2%) Query: 68 DVSLADTTFVVVDLETTGGRAK---ATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPG 124 ++SL +TTFVVVDLETTGGR AT P DAITEIGAVKV GG VLGE ATLV+P Sbjct: 27 EMSLRETTFVVVDLETTGGRTTGNDATPP----DAITEIGAVKVCGGAVLGEFATLVNPQ 82 Query: 125 RAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQ 184 +IPPQIV LTGITTAMV +AP IDAVLPMF EFA +VLVAHNAGFDIGFLRAAA R Sbjct: 83 HSIPPQIVRLTGITTAMVGNAPTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCD 142 Query: 185 LTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGL 244 +TWP+P VLCT++LARRVL+RDEAPSVRL+ LARLF ++ PTHRALDDARATVDVLH L Sbjct: 143 ITWPQPQVLCTMRLARRVLSRDEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHAL 202 Query: 245 IERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVD 304 IERVGNQGVHT A+LR+YLP+ T AQR R LA+ LP+RPGVYLFRGPS EVLYVGTA D Sbjct: 203 IERVGNQGVHTYAELRSYLPNVTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAAD 262 Query: 305 LRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKA 364 LRRRV QYF G D R RM EM LA+ +DHVECAH LEAGVRELR+L+ HAPPYNRRSK Sbjct: 263 LRRRVSQYFNGTDRRKRMTEMVMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKF 322 Query: 365 PKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGA 424 P RWWWVALTDE FPRLS +R PRH + +GPF +RS A ETA LLAR TG+RTCT+R Sbjct: 323 PYRWWWVALTDEAFPRLSVIRAPRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTR 382 Query: 425 TGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADS 482 + H CPE E+S CPA + +A LA + + +LA Sbjct: 383 SARHGPACPELEVSACPAARDVTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERR 442 Query: 483 RYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDG--NGGWHFAVVRYGQLAGA 540 RYE AAR+RDH A AI+ LW GQRL+ L +LPEL+AA+ DG GG+ AV+R+GQLA A Sbjct: 443 RYESAARLRDHLATAIEALWHGQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAA 502 Query: 541 GTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTD 600 G A RGVPPMPVVDAI AQ ++PT PLGGALVEE ALIARWLA P VRIV + Sbjct: 503 GRAPRGVPPMPVVDAIRRGAQAILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSNDA- 561 Query: 601 MGWATPIGAAGXXXXXXXXXXXXXXXXLQ----DRSELLTEPHPTREQLFGRTGVDGLDG 656 G A+P+ +AG Q +S+L TEPHP+REQLFGRTGVD G Sbjct: 562 AGLASPVRSAGPWAAWAATARSAQLAGEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTG 621 Query: 657 TRETGLPRRKPLSVAG 672 + LP R+P S AG Sbjct: 622 PPQPLLPGRQPFSTAG 637 >tr|Q7TYX5|Q7TYX5_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb2214;[Mycobacterium bovis] Length = 645 Score = 722 bits (1863), Expect = 0.0 Identities = 396/650 (60%), Positives = 455/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ET LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETTALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|C1AQA6|C1AQA6_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 645 Score = 722 bits (1863), Expect = 0.0 Identities = 396/650 (60%), Positives = 455/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ET LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETTALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|A1KKN3|A1KKN3_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_2207;[Mycobacterium bovis] Length = 645 Score = 722 bits (1863), Expect = 0.0 Identities = 396/650 (60%), Positives = 455/650 (70%), Gaps = 28/650 (4%) Query: 43 PNVIAMSQRSTAVGAQLSL-DMELER--------DVSLADTTFVVVDLETTGGRAK---A 90 PNV AM G QLS D+ + ++SL +TTFVVVDLETTGGR A Sbjct: 4 PNVAAMGATG---GTQLSFADLAHAQGAAWTPADEMSLRETTFVVVDLETTGGRTTGNDA 60 Query: 91 TAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDA 150 T P DAITEIGAVKV GG VLGE ATLV+P +IPPQIV LTGITTAMV +AP IDA Sbjct: 61 TPP----DAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNAPTIDA 116 Query: 151 VLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPS 210 VLPMF EFA +VLVAHNAGFDIGFLRAAA R +TWP+P VLCT++LARRVL+RDEAPS Sbjct: 117 VLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSRDEAPS 176 Query: 211 VRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQ 270 VRL+ LARLF ++ PTHRALDDARATVDVLH LIERVGNQGVHT A+LR+YLP+ T AQ Sbjct: 177 VRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPNVTQAQ 236 Query: 271 RRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAT 330 R R LA+ LP+RPGVYLFRGPS EVLYVGTA DLRRRV QYF G D R RM EM LA+ Sbjct: 237 RCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEMVMLAS 296 Query: 331 RVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHR 390 +DHVECAH LEAGVRELR+L+ HAPPYNRRSK P RWWWVALTDE FPRLS +R PRH Sbjct: 297 SIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIRAPRHD 356 Query: 391 KAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXX 448 + +GPF +RS A ET LLAR TG+RTCT+R + H CPE E+S CPA + Sbjct: 357 RVVGPFRSRSKAAETTALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARDVTAAQ 416 Query: 449 XXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQ 508 +A LA + + +LA RYE AAR+RDH A AI+ LW GQRL+ Sbjct: 417 YAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWHGQRLR 476 Query: 509 TLTSLPELVAARRDG--NGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPT 566 L +LPEL+AA+ DG GG+ AV+R+GQLA AG A RGVPPMPVVDAI AQ ++PT Sbjct: 477 ALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQAILPT 536 Query: 567 AEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAAGXXXXXXXXXXXXXXX 626 PLGGALVEE ALIARWLA P VRIV + G A+P+ +AG Sbjct: 537 PAPLGGALVEEIALIARWLAEPGVRIVGVSNDA-AGLASPVRSAGPWAAWAATARSAQLA 595 Query: 627 XLQ----DRSELLTEPHPTREQLFGRTGVDGLDGTRETGLPRRKPLSVAG 672 Q +S+L TEPHP+REQLFGRTGVD G + LP R+P S AG Sbjct: 596 GEQLSRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPLLPGRQPFSTAG 645 >tr|D5PP81|D5PP81_COREQ Tax_Id=525370 SubName: Full=DNA polymerase III epsilon subunit; EC=2.7.7.7;[Rhodococcus equi ATCC 33707] Length = 577 Score = 641 bits (1654), Expect = 0.0 Identities = 355/561 (63%), Positives = 398/561 (70%), Gaps = 18/561 (3%) Query: 53 TAVGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGE 112 TA G QL+ D E D L +TTFVVVDLETTGG +++ DAITEIGAVKVRGGE Sbjct: 9 TADGLQLTFD---ELDTPLRETTFVVVDLETTGGSSES-------DAITEIGAVKVRGGE 58 Query: 113 VLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFD 172 VLGEL TLVDPGRAIPP IVELTGITTAMVR APRID VLP FLEFA GAVLVAHNAGFD Sbjct: 59 VLGELGTLVDPGRAIPPYIVELTGITTAMVRTAPRIDTVLPAFLEFAGGAVLVAHNAGFD 118 Query: 173 IGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALD 232 +GFL+AAA R L WP+ VLCTVKLARRVL RDEAPSV+LS LA L GA TTPTHRALD Sbjct: 119 VGFLKAAAARQGLPWPKFQVLCTVKLARRVLGRDEAPSVKLSALAALLGADTTPTHRALD 178 Query: 233 DARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGP 292 DARATVDVLH LI RVGNQGVH+L +L YLP + QR R LA LP PGVYLFRGP Sbjct: 179 DARATVDVLHALIGRVGNQGVHSLPELLDYLPRVSSEQRAKRTLASHLPRSPGVYLFRGP 238 Query: 293 SDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLA 352 SDEVLYVGTA DLRRRVR YFTG++ R RMKEM +LATRVDHVECAH LEAGVRELRLL+ Sbjct: 239 SDEVLYVGTASDLRRRVRNYFTGSETRGRMKEMVALATRVDHVECAHPLEAGVRELRLLS 298 Query: 353 AHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARF 412 AH PPYNRRSK P R WWV LTDE FPRLS VR P A+GPF +R+DA + A +A F Sbjct: 299 AHVPPYNRRSKFPMRGWWVTLTDEAFPRLSVVRTPT-ADALGPFRSRTDATDAAATVAEF 357 Query: 413 TGVRTCTSRFGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLAD 470 G+RTCT+R G H +CP R++ CPA + A L Sbjct: 358 CGLRTCTTRIGKGQRHGPKCPPRDIGGCPAI-ADDEEGYRVAPETARALIRGEDDAPLRR 416 Query: 471 VLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFA 530 IE+LAA +E AAR+RD A+ L R QRL L ++ ELVAAR GGW FA Sbjct: 417 ARARIEELAAAELFESAARLRDRVAILGLALRRVQRLAALAAVDELVAARPAPEGGWEFA 476 Query: 531 VVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDV 590 VVR G+LA AG +RRGV PMPVV+A+ A+A+ V+P PL GA EE A+IARWL A V Sbjct: 477 VVRAGRLASAGVSRRGVAPMPVVEALVASAETVLPDPVPLRGASPEELAVIARWLDADGV 536 Query: 591 RIVRTAGQTDMGWATPIGAAG 611 RIVRT+ GW+ P AG Sbjct: 537 RIVRTS----HGWSEPAHGAG 553 >tr|B1MP02|B1MP02_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA polymerase III epsilon subunit;[Mycobacterium abscessus] Length = 600 Score = 638 bits (1645), Expect = 0.0 Identities = 345/548 (62%), Positives = 382/548 (69%), Gaps = 18/548 (3%) Query: 70 SLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPP 129 +L DTTFVVVDLETTGG A+ DAITEIGAVKVRGGEVLGELATLVDP R++PP Sbjct: 22 TLRDTTFVVVDLETTGGSAEN-------DAITEIGAVKVRGGEVLGELATLVDPQRSLPP 74 Query: 130 QIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPR 189 QIV LTGIT+AM+ DAP I VLP FLEFARGAVLVAHNAGFDIGFL+AAA + + WP+ Sbjct: 75 QIVRLTGITSAMLVDAPPIAQVLPAFLEFARGAVLVAHNAGFDIGFLKAAARQCGIDWPQ 134 Query: 190 PPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVG 249 P VLCTV+LARRVL+RDEAP V L LA+L GASTTP HRALDDARATVDVLH LI RVG Sbjct: 135 PAVLCTVRLARRVLSRDEAPRVSLGALAQLLGASTTPNHRALDDARATVDVLHALISRVG 194 Query: 250 NQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRV 309 NQGV T+ +LR Y A R R LAD +P PGVYLFRGPS EVLYVGTAV+LRRRV Sbjct: 195 NQGVGTMDELRRYRTQVPSALRGKRRLADAMPYAPGVYLFRGPSGEVLYVGTAVNLRRRV 254 Query: 310 RQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWW 369 +QYFTGADPR RM+EM ++AT VDHV CAH LEA VRELRLL AHAPPYNR+S+ P RWW Sbjct: 255 QQYFTGADPRGRMREMVTIATAVDHVICAHPLEAAVRELRLLGAHAPPYNRKSRFPHRWW 314 Query: 370 WVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH- 428 WV LT+EPFPR S VR R +GPF AR DA A +LARFTGVRTCT+R GA G H Sbjct: 315 WVVLTEEPFPRFSVVRTTNGRPTLGPFRARGDATTAALVLARFTGVRTCTNRIGAGGRHG 374 Query: 429 ------RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADS 482 P SPCPA L + + +L A Sbjct: 375 SACDGQSYPHDTASPCPAAAGVDATVYRDGLAPMLAVLDGTHGQPLQAMCDRVAELGAQR 434 Query: 483 RYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGAGT 542 RYE AAR RD I+ L R RL L + EL+AAR DG GGW AVVR+GQLAGA Sbjct: 435 RYETAARQRDATTALIEVLARQHRLHALARIEELIAARPDGEGGWQIAVVRHGQLAGAAV 494 Query: 543 ARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMG 602 ARRGVPPMPVV A A+AQVV+PT EP GGA EET LI RWLA P VRIV TD G Sbjct: 495 ARRGVPPMPVVAAASASAQVVLPTPEPFGGAAPEETGLITRWLAEPGVRIV---SSTD-G 550 Query: 603 WATPIGAA 610 +A G A Sbjct: 551 YAEATGCA 558 >tr|Q0SHN3|Q0SHN3_RHOSR Tax_Id=101510 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Rhodococcus sp.] Length = 588 Score = 629 bits (1621), Expect = e-178 Identities = 346/561 (61%), Positives = 392/561 (69%), Gaps = 19/561 (3%) Query: 55 VGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVL 114 V QL D E D L DTTFVVVDLETTG R PG DAITEIGAVK+RGGEV+ Sbjct: 6 VPEQLRFD---ELDTPLRDTTFVVVDLETTGAR-----PGE--DAITEIGAVKIRGGEVI 55 Query: 115 GELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIG 174 E+ATLVDPGR+IPP IVE+TGITTAMV DAPRI+ VLP FLEFARGAVLVAHNA FD G Sbjct: 56 AEMATLVDPGRSIPPHIVEITGITTAMVIDAPRIERVLPAFLEFARGAVLVAHNAPFDTG 115 Query: 175 FLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDA 234 FL+AAA T WP+ VLCTVKLARRVL+RDEAPSV+LS LARLF TTPTHRALDDA Sbjct: 116 FLKAAASATDTPWPKFTVLCTVKLARRVLSRDEAPSVKLSSLARLFDVGTTPTHRALDDA 175 Query: 235 RATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSD 294 RATVDVLH LI RVGNQGVH+L +L YLPD + QR R+LA LP+ PGVYLFRGPSD Sbjct: 176 RATVDVLHALIARVGNQGVHSLTELVDYLPDVSSHQRAKRSLAGHLPHAPGVYLFRGPSD 235 Query: 295 EVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAH 354 EVLYVGTA DLRRRVR YFTG++ R RMKEM +L TR+DHVECAH LEAGVRELRLLAAH Sbjct: 236 EVLYVGTATDLRRRVRNYFTGSETRGRMKEMVALTTRIDHVECAHALEAGVRELRLLAAH 295 Query: 355 APPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTG 414 PPYNRRSK PKR WW+ LT E FPRLS VR P ++GPF +RS AV+ AD+LA + Sbjct: 296 TPPYNRRSKYPKRGWWITLTVEAFPRLSVVRTPT-ADSLGPFRSRSTAVDLADVLAEYCI 354 Query: 415 VRTCTSRFGATGIH--RCPERELSPCPAT--QSXXXXXXXXXXXXXXXXXXXXXSAVLAD 470 +RTCTSR H +CP REL+ CPA+ A L Sbjct: 355 LRTCTSRIPKGREHGPQCPPRELAGCPASVHDRATEDAYRPGPELFRQFLRGLDDAPLHR 414 Query: 471 VLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFA 530 + +E+LAA +E AAR+RD A + L R QRL LT+L +LVAAR GGW FA Sbjct: 415 MRAQVEELAAGELFENAARLRDRTAEVVLALRRMQRLAALTALDQLVAARPAATGGWEFA 474 Query: 531 VVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDV 590 V+R G+LA AG ARRG+ PMPVVDA+ A+ V+P A PL GA EE L+ARWL D Sbjct: 475 VIRSGRLASAGCARRGIHPMPVVDALVLTAETVVPDATPLRGASPEEAGLLARWLDQEDT 534 Query: 591 RIVRTAGQTDMGWATPIGAAG 611 RIV + GW P AG Sbjct: 535 RIVSASA----GWCEPARGAG 551 >tr|C1AU93|C1AU93_RHOOB Tax_Id=632772 (dnaQ)SubName: Full=Putative DNA polymerase III epsilon subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 588 Score = 627 bits (1618), Expect = e-177 Identities = 346/561 (61%), Positives = 390/561 (69%), Gaps = 19/561 (3%) Query: 55 VGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVL 114 V QL D E D L DTTFVVVDLETTG R PG DAITEIGAVK+RGGEV+ Sbjct: 6 VPEQLRFD---ELDTPLRDTTFVVVDLETTGAR-----PGE--DAITEIGAVKIRGGEVI 55 Query: 115 GELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIG 174 E+ATLVDPGR+IPP IVE+TGITTAMV DAPRI+ VLP FLEFARGAVLVAHNA FD G Sbjct: 56 AEMATLVDPGRSIPPHIVEITGITTAMVIDAPRIERVLPAFLEFARGAVLVAHNAPFDTG 115 Query: 175 FLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDA 234 FL+AAA T WP+ VLCTVKLARRVLTRDEAPSV+LS LARL TTPTHRALDDA Sbjct: 116 FLKAAAAATDTPWPKFTVLCTVKLARRVLTRDEAPSVKLSSLARLLDVGTTPTHRALDDA 175 Query: 235 RATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSD 294 RATVDVLH LI RVGNQGVH+L +L YLPD + QR R LA LP+ PGVYLFRGPSD Sbjct: 176 RATVDVLHALIARVGNQGVHSLTELVDYLPDVSSHQRAKRTLASHLPHAPGVYLFRGPSD 235 Query: 295 EVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAH 354 EVLYVGTA DLRRRVR YFTG++ R RMKEM +L TR+DHVECAH LEAGVRELRLLAAH Sbjct: 236 EVLYVGTATDLRRRVRNYFTGSETRGRMKEMVALTTRIDHVECAHALEAGVRELRLLAAH 295 Query: 355 APPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTG 414 PPYNRRSK PKR WW+ LT E FPRLS VR P ++GPF +RS AV+ AD+LA + Sbjct: 296 TPPYNRRSKYPKRGWWITLTAEAFPRLSVVRTPA-ADSLGPFRSRSTAVDVADVLAEYCI 354 Query: 415 VRTCTSRFGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXS--AVLAD 470 +RTCTSR H +CP REL CPA+ + A L Sbjct: 355 LRTCTSRIPKGREHGAQCPPRELGRCPASVHGRNTEDAYRPGPELFRLFLRGADDAPLHR 414 Query: 471 VLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFA 530 + +E+LAA +E AAR+RD A + L R QRL LT+L +LVAAR GGW FA Sbjct: 415 MRARVEELAAGELFENAARLRDRTAEVVLALRRMQRLAALTALDQLVAARPAATGGWEFA 474 Query: 531 VVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDV 590 V+R G+LA AG ARRG+ PMPVVDA+ A+ V+P A PL GA EE L+ARWL D Sbjct: 475 VIRSGRLASAGCARRGIHPMPVVDALVLTAETVVPDATPLRGASPEEAGLLARWLDQDDT 534 Query: 591 RIVRTAGQTDMGWATPIGAAG 611 RIV + GW P AG Sbjct: 535 RIVSASS----GWCEPARGAG 551 >tr|C3JJ89|C3JJ89_RHOER Tax_Id=596309 SubName: Full=DNA polymerase III, epsilon subunit;[Rhodococcus erythropolis SK121] Length = 608 Score = 627 bits (1616), Expect = e-177 Identities = 338/561 (60%), Positives = 394/561 (70%), Gaps = 19/561 (3%) Query: 55 VGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVL 114 VG QLS D E D L++TTFVVVDLETTGG A D+ITEIGAVK+RGGEVL Sbjct: 45 VGRQLSFD---ELDTPLSETTFVVVDLETTGGSADQ-------DSITEIGAVKIRGGEVL 94 Query: 115 GELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIG 174 GE+ATLVDPGR+IPP IVELTGITTAM+ AP I+ VLP FLEFA GAVLVAHNA FDIG Sbjct: 95 GEMATLVDPGRSIPPYIVELTGITTAMLIGAPPIERVLPAFLEFAEGAVLVAHNAPFDIG 154 Query: 175 FLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDA 234 FL+AAA R+ WP VLCTVKLARRVLTRDEAPSV+LS LA LF +T PTHRALDDA Sbjct: 155 FLKAAASRSARPWPAFRVLCTVKLARRVLTRDEAPSVKLSALAHLFQVTTQPTHRALDDA 214 Query: 235 RATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSD 294 RATVDVLHGLI+RVGNQGVH+ ++L YLP+ + QR R+ A LP PGVYLFRGPSD Sbjct: 215 RATVDVLHGLIDRVGNQGVHSYSELVDYLPNISSHQRAKRSFAANLPRSPGVYLFRGPSD 274 Query: 295 EVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAH 354 E LY+GTA DLRRRVR YFTG++ R RMKEM +LATRVDHVECAH LEAGVRELRLL+AH Sbjct: 275 EALYIGTATDLRRRVRNYFTGSETRGRMKEMVALATRVDHVECAHALEAGVRELRLLSAH 334 Query: 355 APPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTG 414 APPYNRRSK PKR WW+ LTDE FPRLS VR P +IGPF++R+DAV+ AD +A F+ Sbjct: 335 APPYNRRSKFPKRGWWITLTDEAFPRLSVVRTPT-ADSIGPFTSRADAVDVADTVAEFSR 393 Query: 415 VRTCTSRFGATGIH--RCPERELSPCPA--TQSXXXXXXXXXXXXXXXXXXXXXSAVLAD 470 +RTCT R G +H CP REL CPA T A L Sbjct: 394 LRTCTKRLGRGAVHGPDCPARELGACPASWTPEINAADYAAAPEAVRGFFRGTNDAPLQQ 453 Query: 471 VLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFA 530 + I++L+A + +E AAR+RD + R QRL + ++ +LV AR G+GGW + Sbjct: 454 MQARIDELSAHALFENAARLRDRTVAVATAVRRTQRLAAVAAIEQLVLARPTGDGGWELS 513 Query: 531 VVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDV 590 V+R G+LA AG ARRG PMPVVDAI AAA+ V+P P GA EE LIARWL++ V Sbjct: 514 VIRSGRLASAGLARRGTHPMPVVDAITAAAETVLPDDAPFRGASPEELGLIARWLSSDGV 573 Query: 591 RIVRTAGQTDMGWATPIGAAG 611 RIV G+ P+ AG Sbjct: 574 RIVSATS----GYVEPVSGAG 590 >tr|Q5YZ23|Q5YZ23_NOCFA Tax_Id=37329 SubName: Full=Putative DNA polymerase III subunit;[Nocardia farcinica] Length = 598 Score = 625 bits (1613), Expect = e-177 Identities = 343/560 (61%), Positives = 385/560 (68%), Gaps = 32/560 (5%) Query: 58 QLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGEL 117 QL+ D E D L DTTFVVVDLETTG T+P G DAITEIGAVKVRGGEVLGE Sbjct: 12 QLAFD---ELDTPLYDTTFVVVDLETTG-----TSPEG--DAITEIGAVKVRGGEVLGEF 61 Query: 118 ATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLR 177 ATLV+PGRAIPP +V++TGITTA+V APRI+AVLP FLEFA GAVLVAHNA FD FLR Sbjct: 62 ATLVNPGRAIPPAVVQVTGITTALVYAAPRIEAVLPGFLEFAAGAVLVAHNARFDTAFLR 121 Query: 178 AAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARAT 237 AAA R L WP PVLCTVKLARRVL RDEAPSVRL+ LARL GAST PTHRALDDARAT Sbjct: 122 AAAARCALPWPDAPVLCTVKLARRVLGRDEAPSVRLASLARLLGASTQPTHRALDDARAT 181 Query: 238 VDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVL 297 VDVLH LI RVGNQGVH+L +L YLPD + QR R+ A GLP PGVYLFRGPSDEVL Sbjct: 182 VDVLHALIARVGNQGVHSLTELMDYLPDVSAGQRAKRSFAAGLPTAPGVYLFRGPSDEVL 241 Query: 298 YVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPP 357 Y+GTAV+LRRRVR YFTG++ R RMKEM +LATRVDHV CAH LEAGVRELRLL AHAPP Sbjct: 242 YIGTAVNLRRRVRTYFTGSETRGRMKEMVALATRVDHVVCAHGLEAGVRELRLLVAHAPP 301 Query: 358 YNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRT 417 YNRRSK PKR WW+ LTDE FPRL+ VR P A+GPF++R DAV+ A LA G+RT Sbjct: 302 YNRRSKFPKRVWWITLTDEAFPRLAVVRTPT-PDALGPFTSRQDAVDVAATLAEHAGLRT 360 Query: 418 CTSRFGATGIHRCPERELSPCPATQS--XXXXXXXXXXXXXXXXXXXXXSAVLADVLMHI 475 CT+R + +H CP + CPA + VL + I Sbjct: 361 CTTRLARSAVHDCPPSVVGGCPAARETPCTAAEYAPAPAAVRDLVAGRCDTVLHTMRARI 420 Query: 476 EKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYG 535 + AA +E AAR+RD + L R QRL L + EL+AA DG GGW FAVVRYG Sbjct: 421 DSAAAAEHFEAAARLRDRMVAVVRALRRTQRLAALARIAELIAAHPDGAGGWEFAVVRYG 480 Query: 536 QLAGAGTARRGVPPMPVVDAICAAAQVVMP-------------------TAEPLGGALVE 576 +LAGAG A RG PPMPVV+ I AAA+ V+P PL GA E Sbjct: 481 RLAGAGVAARGTPPMPVVEQIVAAAETVVPDGVAGVGVPDDEVAGLAELVGPPLLGAPPE 540 Query: 577 ETALIARWLAAPDVRIVRTA 596 E LIARWL P VRIVRT+ Sbjct: 541 EVGLIARWLERPGVRIVRTS 560 >tr|C1A114|C1A114_RHOE4 Tax_Id=234621 (dnaQ)SubName: Full=Putative DNA polymerase III epsilon subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 586 Score = 625 bits (1613), Expect = e-177 Identities = 338/561 (60%), Positives = 394/561 (70%), Gaps = 19/561 (3%) Query: 55 VGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVL 114 VG QLS D E D L++TTFVVVDLETTGG A D+ITEIGAVK+RGGEVL Sbjct: 23 VGRQLSFD---ELDTPLSETTFVVVDLETTGGSADQ-------DSITEIGAVKIRGGEVL 72 Query: 115 GELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIG 174 GE+ATLVDPGR+IPP IVELTGITTAM+ AP I+ VLP FLEFA GAVLVAHNA FDIG Sbjct: 73 GEMATLVDPGRSIPPYIVELTGITTAMLIGAPPIERVLPAFLEFAEGAVLVAHNAPFDIG 132 Query: 175 FLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDA 234 FL+AAA R+ WP VLCTVKLARRVLTRDEAPSV+LS LA LF +T PTHRALDDA Sbjct: 133 FLKAAASRSARPWPSFRVLCTVKLARRVLTRDEAPSVKLSALAHLFQVTTQPTHRALDDA 192 Query: 235 RATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSD 294 RATVDVLHGLI+RVGNQGVH+ ++L YLP+ + QR R+ A LP PGVYLFRGPSD Sbjct: 193 RATVDVLHGLIDRVGNQGVHSYSELVDYLPNISSHQRAKRSFAANLPRSPGVYLFRGPSD 252 Query: 295 EVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAH 354 E LY+GTA DLRRRVR YFTG++ R RMKEM +LATRVDHVECAH LEAGVRELRLL+AH Sbjct: 253 EALYIGTATDLRRRVRNYFTGSETRGRMKEMVALATRVDHVECAHALEAGVRELRLLSAH 312 Query: 355 APPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTG 414 APPYNRRSK PKR WW+ LTDE FPRLS VR P +IGPF++R DAVE AD +A F+ Sbjct: 313 APPYNRRSKFPKRGWWITLTDEAFPRLSVVRTPT-ADSIGPFTSRGDAVEVADTVAEFSR 371 Query: 415 VRTCTSRFGATGIH--RCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXS--AVLAD 470 +RTCT R G +H CP REL CPA+ + + A L Sbjct: 372 LRTCTKRLGRGAVHGPDCPARELGACPASWAPELTAQDYAAAPETVRGFFRGTNDAPLQQ 431 Query: 471 VLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFA 530 + I++L+ + +E AAR+RD + R QRL + ++ +L+ AR G+GGW + Sbjct: 432 MQARIDELSEHALFENAARLRDRTVAVSTAVRRTQRLAAVAAIEQLILARPTGDGGWELS 491 Query: 531 VVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDV 590 V+R G+LA AG ARRG PMPVVDAI AAA+ V+P P GA EE LIARWLA+ V Sbjct: 492 VIRSGRLASAGLARRGTHPMPVVDAITAAAETVLPDDAPFRGASPEELGLIARWLASDGV 551 Query: 591 RIVRTAGQTDMGWATPIGAAG 611 RIV G+ P G AG Sbjct: 552 RIVSATS----GYVEPAGGAG 568 >tr|A4FAD3|A4FAD3_SACEN Tax_Id=405948 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 572 Score = 590 bits (1522), Expect = e-166 Identities = 326/562 (58%), Positives = 376/562 (66%), Gaps = 21/562 (3%) Query: 57 AQLSLDMEL-ERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLG 115 AQLS D + E +V L + TFVVVDLETTGG DA+TEIGAVKVRGGEV+G Sbjct: 5 AQLSFDEIVPEVEVPLNEVTFVVVDLETTGG-------SNAQDAVTEIGAVKVRGGEVVG 57 Query: 116 ELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGF 175 E TLVDP R IPP +V +TGIT AMVRDAPR+D+VLP FLEF RG+VLVAHNA FD GF Sbjct: 58 EFQTLVDPERDIPPSVVTITGITEAMVRDAPRLDSVLPAFLEFCRGSVLVAHNAPFDTGF 117 Query: 176 LRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDAR 235 LRA ER L WP+P V+CTV+LARRVLTRDE P+ RL LA + GA T P HRALDDAR Sbjct: 118 LRAGCERLGLRWPKPKVVCTVRLARRVLTRDETPNYRLGTLAGVLGARTEPVHRALDDAR 177 Query: 236 ATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDE 295 ATVDVLH L+ER+G GV TL DL +LPD TP QRR R LAD LPN GVYLFRGP++E Sbjct: 178 ATVDVLHALLERLGPIGVRTLEDLLGHLPDVTPLQRRKRGLADALPNASGVYLFRGPNEE 237 Query: 296 VLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHA 355 VLYVGTA DLRRRVRQYFT + R+R+KEM LA R+DHV CAH LEA VRELRLLAAH Sbjct: 238 VLYVGTATDLRRRVRQYFTAGEKRSRIKEMVGLAERIDHVVCAHPLEAEVRELRLLAAHQ 297 Query: 356 PPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGV 415 P YNRRSK P+R WWV LTDEPFPRLS VR PR A+GPF++R A E D L T V Sbjct: 298 PRYNRRSKFPQRAWWVVLTDEPFPRLSVVRTPR-PTALGPFASRRAAAEAVDALQEATKV 356 Query: 416 RTCTSRFGATGIHRCP------ERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLA 469 R CT R A P +R +PC QS + VL Sbjct: 357 RRCTERIPARDPRGRPCALYELQRCAAPCAGLQS--AEDYAPEVIAISDVVAGLGTGVLH 414 Query: 470 DVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHF 529 + +E+L+ R+E AA RD A + +L RGQRL L ++PELVAAR DG GGWH Sbjct: 415 RLRAELERLSRAQRFEDAAVHRDRLAALVRSLDRGQRLSALAAVPELVAARPDGRGGWHL 474 Query: 530 AVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPD 589 AVVR+G+LA AGTARRGVPPMPVVD + A+A+ V A PL GA +E ++ RWL Sbjct: 475 AVVRHGRLAAAGTARRGVPPMPVVDLLQASAETVTEGAGPLRGASPDEVRVVHRWLTTGG 534 Query: 590 VRIVRTAGQTDMGWATPIGAAG 611 R+VR + W P AG Sbjct: 535 TRMVRCS----QPWVEPARGAG 552 >tr|C7MZ07|C7MZ07_SACVD Tax_Id=471857 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Saccharomonospora viridis] Length = 570 Score = 578 bits (1491), Expect = e-163 Identities = 325/558 (58%), Positives = 375/558 (67%), Gaps = 19/558 (3%) Query: 58 QLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGEL 117 QL+ D E L + TFVVVDLETTG P G ITEIGAVKVRGGEV+GE Sbjct: 2 QLAFD---ELGTPLREVTFVVVDLETTG-----VTPDGA--GITEIGAVKVRGGEVVGEF 51 Query: 118 ATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLR 177 ATLVDPG IPPQIV LTGIT AMVR APRI+ VLP FLEF GAVLVAHNAGFD+ FL+ Sbjct: 52 ATLVDPGVPIPPQIVALTGITPAMVRSAPRIEQVLPTFLEFVSGAVLVAHNAGFDVSFLK 111 Query: 178 AAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARAT 237 AA + WP+P V+CT+KLARRVL R E RLS LA LFGA +TP HRALDDA+AT Sbjct: 112 AACQTHGYEWPKPTVVCTLKLARRVLGRQETRGHRLSTLASLFGARSTPKHRALDDAKAT 171 Query: 238 VDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVL 297 VDVLHGL+ERVG GV +L +L YL TPAQRR R LA LP RPGVYLFRGPSDEVL Sbjct: 172 VDVLHGLLERVGPLGVQSLEELLDYLRAVTPAQRRKRGLAAHLPERPGVYLFRGPSDEVL 231 Query: 298 YVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPP 357 YVGTA +LRRRVRQYFT +D R R++EM +LA RVD VEC+H LEA VRELRLLAA+ PP Sbjct: 232 YVGTARNLRRRVRQYFTASDNRGRIREMVALAERVDAVECSHALEAAVRELRLLAAYRPP 291 Query: 358 YNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRT 417 YNRRS+ P + WWV LTDEPFPRLS VR PR A+GPF++R+ A AD LA +RT Sbjct: 292 YNRRSRNPSKVWWVVLTDEPFPRLSVVRQPRD-GALGPFTSRNSARAVADTLADLARLRT 350 Query: 418 CTSRFGATGI--HRCPERELSPC--PATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLM 473 CT R ATG C EL C P + +A+L Sbjct: 351 CTRRIPATGAAGPSCVLAELGSCGAPCIGAQTAEDYRLSVRLVSDLIDGVDTALLRRGHE 410 Query: 474 HIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVR 533 ++ L+A +E+AAR RD + + + RL L SL ELVAA DG+GGW FAVVR Sbjct: 411 QLDALSAIQHFERAARRRDELVAVLRAVDKRHRLAALASLEELVAASPDGSGGWEFAVVR 470 Query: 534 YGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIV 593 YG+LA AG ARRGVPPMPVVDA+ +A+ V+P PL GA EETAL+ RWL P VR+V Sbjct: 471 YGRLASAGVARRGVPPMPVVDALVDSAETVLPEPGPLRGANGEETALLWRWLTRPGVRLV 530 Query: 594 RTAGQTDMGWATPIGAAG 611 RT+ WA P+ AG Sbjct: 531 RTSAP----WAEPVHGAG 544 >tr|D5USL5|D5USL5_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 610 Score = 566 bits (1459), Expect = e-159 Identities = 315/569 (55%), Positives = 360/569 (63%), Gaps = 35/569 (6%) Query: 68 DVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAI 127 D L + TFVVVDLETTGG K GG DAITEIGAVKVRGGEVLGE ATLVDP R I Sbjct: 14 DPDLREVTFVVVDLETTGGSPK----GG--DAITEIGAVKVRGGEVLGEFATLVDPERGI 67 Query: 128 PPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTW 187 P I LTGITTAMV AP I +VLP FLEFA+GAVLVAHNA FDIGFL+AAA T W Sbjct: 68 APHITHLTGITTAMVTGAPTIASVLPAFLEFAQGAVLVAHNARFDIGFLKAAAAATGTPW 127 Query: 188 PRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIER 247 P+P LCTV+LARRVLTRDEAPSV+LSE+ARLF A TTPTHRALDDARATVDVLHGLI R Sbjct: 128 PKPQTLCTVQLARRVLTRDEAPSVKLSEMARLFRAETTPTHRALDDARATVDVLHGLIGR 187 Query: 248 VGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRR 307 VGN G+ T A+LR +LP TP QR R LAD LP RPGVYLFRGP DEVLYVGT+ +LRR Sbjct: 188 VGNLGIRTFAELRGHLPSVTPQQRAKRGLADPLPERPGVYLFRGPGDEVLYVGTSRNLRR 247 Query: 308 RVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKR 367 RVR YFT + R R+KEM LA RVDHVECAH LEA RELRL+AAH PPYNRRSK PKR Sbjct: 248 RVRSYFTSGETRGRIKEMVGLAERVDHVECAHALEAAARELRLIAAHTPPYNRRSKYPKR 307 Query: 368 WWWVALTDEPFPRLSAVRD-PRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGATG 426 WW+ LT EPFPRL+ R P +GP +R++A + ADL+A G+RTCT+R G Sbjct: 308 GWWICLTVEPFPRLAVKRSAPAGSVCLGPIRSRTEAADLADLIAETCGLRTCTTRLRPGG 367 Query: 427 IHRCP-----ERELSPCPATQS--XXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLA 479 H C R + C + S SAV + ++ L Sbjct: 368 AHACALGPDGTRPVGGCHGSVSAPEPASLYRPRADRAAAMLTGRSSAVFDALQARLDSLV 427 Query: 480 ADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAG 539 +E AAR+RD A +D R L +PEL A DG GGW ++VR+G+LA Sbjct: 428 EREFFESAARLRDRTAQLVDITLRSHSLAAFAEVPELSIAHPDGAGGWELSIVRHGRLAA 487 Query: 540 AGTARRGVPPMPVVDAICAAAQVVMPT-----------------AEPLGGALVEETALIA 582 AG A RGVPPMPV D + + A+ V A+ L GA EE AL+ Sbjct: 488 AGVAPRGVPPMPVFDRLRSGAETVYEADAPADQPALFVPDALFPADVLHGASPEEAALLR 547 Query: 583 RWLAAPDVRIVRTAGQTDMGWATPIGAAG 611 RW P RIV G W P+ AG Sbjct: 548 RWALQPGTRIVEVRGT----WGEPLHGAG 572 >tr|D0LAW5|D0LAW5_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Gordonia bronchialis] Length = 595 Score = 563 bits (1450), Expect = e-158 Identities = 313/535 (58%), Positives = 361/535 (67%), Gaps = 19/535 (3%) Query: 68 DVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAI 127 D +L DTT VVVDLETTG + P G D ITEIGAVK+RGGEVLGE ATLVDP R+I Sbjct: 30 DRALFDTTLVVVDLETTG-----SDPAG--DRITEIGAVKIRGGEVLGEFATLVDPERSI 82 Query: 128 PPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTW 187 PPQIV LTGIT AMV APRI+ VLP F+EFARG++LVAHNA FD+GFLR A+R L + Sbjct: 83 PPQIVTLTGITHAMVSAAPRIEEVLPAFIEFARGSILVAHNARFDMGFLRRNAQRLHLDF 142 Query: 188 PRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIER 247 P P LCTV +ARR+L R+EAP+VRLS LA LF S PTHRALDDARATV+V H L+ER Sbjct: 143 PFPLSLCTVTMARRILHREEAPTVRLSALADLFDVSVRPTHRALDDARATVEVFHHLLER 202 Query: 248 VGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRR 307 VGNQGVH++ DL YLP T P R R LAD +P RPGVYLFRGPSDEVLYVGTAVDLRR Sbjct: 203 VGNQGVHSIRDLTEYLPRTDPQLRAKRHLADKIPARPGVYLFRGPSDEVLYVGTAVDLRR 262 Query: 308 RVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKR 367 RVR YFTG+DPR R+ EM LA RVDHVEC+H LEA VRELRLL AHAP YNR+SK P R Sbjct: 263 RVRSYFTGSDPRRRIGEMVRLAHRVDHVECSHGLEAAVRELRLLGAHAPAYNRKSKQPHR 322 Query: 368 WWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGI 427 WWV LT E FPRL R P IGP R+ A AD+++ G+RTCT R GA G Sbjct: 323 GWWVVLTAERFPRLKVSRSP-SADTIGPVGNRTTAATIADVISAAAGLRTCTGRAGADGY 381 Query: 428 HRCPERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSAVLA----DVLM-----HIEKL 478 H C R P AT +A L D L+ + Sbjct: 382 HWC--RLPEPGAATVGLCHASSRRPQTLTDYLPRVTAAAALMSGADDALLTALADRVVAA 439 Query: 479 AADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLA 538 +A +E AAR RD A+ ID L R QRL L ++ +L+ AR DG GW FAV+R+G+LA Sbjct: 440 SAAQMFETAARHRDRLALTIDALARCQRLAALCAVAQLIVARPDGARGWEFAVIRHGRLA 499 Query: 539 GAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIV 593 GAG ARRGV PMPVVDA+ A+A+ V+ PL GA EE AL+ RW+ PD RIV Sbjct: 500 GAGVARRGVAPMPVVDALVASAETVIAGDGPLLGAAAEEAALLFRWITEPDARIV 554 >tr|C6W9G7|C6W9G7_ACTMD Tax_Id=446462 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Actinosynnema mirum] Length = 578 Score = 552 bits (1422), Expect = e-155 Identities = 312/565 (55%), Positives = 365/565 (64%), Gaps = 24/565 (4%) Query: 53 TAVGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGE 112 T AQLS D E L +TTFVV DLETTG RA D ITEIGAVKVRGG Sbjct: 11 TTPPAQLSFD---ELGTPLRETTFVVFDLETTGPRAAE-------DGITEIGAVKVRGGR 60 Query: 113 VLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFD 172 V+GE TLVDP R IPPQIV LTGIT MV AP + +VLP FLEFA GAVLVAHN+GFD Sbjct: 61 VIGEFGTLVDPERGIPPQIVALTGITQNMVTGAPVLASVLPAFLEFAEGAVLVAHNSGFD 120 Query: 173 IGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALD 232 +GF++AA ER WP+PPV+CTVKLARRVL+R+EAPS +LS L+ LFG P HRAL Sbjct: 121 VGFMKAACERHGYAWPKPPVVCTVKLARRVLSREEAPSCKLSALSALFGVPEAPNHRALV 180 Query: 233 DARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGP 292 DARATV+VLH L+ERVG+ GVH+L +L AYLPD +P QRR R+LA LP+ PGVYLFRGP Sbjct: 181 DARATVEVLHRLLERVGSVGVHSLEELLAYLPDVSPQQRRKRSLAADLPSAPGVYLFRGP 240 Query: 293 SDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLA 352 S+EVLYVGTA DLRRRVRQYFT ++ R R++EM +LA RVD VECAH LEA VRELRL+A Sbjct: 241 SEEVLYVGTASDLRRRVRQYFTASETRHRLREMVALAVRVDWVECAHPLEAQVRELRLIA 300 Query: 353 AHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARF 412 AH P YNRRSK WW+ALTDE FPRLS VR R A+GPF R A A+ L Sbjct: 301 AHRPAYNRRSKNTAS-WWLALTDEAFPRLSVVRTAR-EGALGPFPTRRAADAAAEALLEA 358 Query: 413 TGVRTCTSRFGATGIHRCP------ERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXSA 466 +R C R A G P R +PC Q + Sbjct: 359 VPLRACAQRIPARGASGTPCALLEMGRCKAPCAGLQE--VDDYADAVARARALIAGESTE 416 Query: 467 VLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGG 526 L + +LA + R+E+AA RD A + L RGQRL L ++ ELVAAR DG GG Sbjct: 417 ALGGAAARLGELALEERFEEAALRRDRLAGLVRALDRGQRLAALAAVEELVAARPDGAGG 476 Query: 527 WHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLA 586 W FAVVR+G+LA AG A RGVPPMPVVDA+ A+A+ V+P A PL G EE ++ RW+ Sbjct: 477 WWFAVVRHGRLASAGVAPRGVPPMPVVDALVASAETVLPGAGPLLGGSAEEVGVVLRWVE 536 Query: 587 APDVRIVRTAGQTDMGWATPIGAAG 611 P R+V WA P AG Sbjct: 537 QPGTRMV----SCSRPWAAPAWGAG 557 >tr|C8XCX1|C8XCX1_NAKMY Tax_Id=479431 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Nakamurella multipartita] Length = 613 Score = 513 bits (1321), Expect = e-143 Identities = 299/566 (52%), Positives = 354/566 (62%), Gaps = 24/566 (4%) Query: 54 AVGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEV 113 AVG Q S D E L + TFVVVDLETTGG + AT +AITEIGAVKVRGG+V Sbjct: 30 AVGGQRSFD---ELGEPLREVTFVVVDLETTGG-SPAT------EAITEIGAVKVRGGQV 79 Query: 114 LGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDI 173 LGE ATLVDPGR IPPQI LTGIT AMV DAPRI +VLP FLEFARG+VLVAHNA FD+ Sbjct: 80 LGEFATLVDPGRTIPPQITMLTGITNAMVYDAPRISSVLPAFLEFARGSVLVAHNARFDV 139 Query: 174 GFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDD 233 GFLRAA R Q+ WP P V+ TV+LAR+VL R EAPSVRLS LA L GA T P HRAL D Sbjct: 140 GFLRAACARQQVPWPGPAVVDTVRLARKVLPRAEAPSVRLSALAALLGARTRPDHRALTD 199 Query: 234 ARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPS 293 ARATVDVLH L ER+G+ GVH+LA+L+ D P +RR R LAD LP PGVYLFRGP Sbjct: 200 ARATVDVLHALFERLGSLGVHSLAELQDASRDVAPQRRRKRWLADRLPAAPGVYLFRGPR 259 Query: 294 DEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAA 353 +EVLYVGT+ +L +RVR YFT A+ R R+ +M +LA RVDHVECAH LEA +RE RL+A Sbjct: 260 EEVLYVGTSRNLAQRVRSYFTAAENRPRINQMVALAERVDHVECAHALEAHIREQRLIAV 319 Query: 354 HAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRK--AIGPFSARSDAVETADLLAR 411 H PPYNRRS+ P WV LTDE FPRLS VR P +GPF R A + L Sbjct: 320 HQPPYNRRSRRPGGVCWVTLTDEAFPRLSIVRQPPRGSPACLGPFPNRVAAQVAVEALQD 379 Query: 412 FTGVRTCTSRFGATGIHRCP------ERELSPCPATQSXXXXXXXXXXXXXXXXXXXXXS 465 +R CT+R P R SPC Q Sbjct: 380 VVPIRQCTTRIRRHSPDGTPCVLAELGRCGSPCDGRQDELSYAREVARIVELVDGRS--D 437 Query: 466 AVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNG 525 +L + + L+AD R+++AA RD + L R QRL L ++ ELV AR D G Sbjct: 438 QLLQLLRTRLLGLSADGRFDQAAVARDRLSALAAALDRRQRLGALAAIRELVVARPDERG 497 Query: 526 GWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWL 585 GW VVR+G+ A A ARRGV PMPVV+A+ A+A+ V P PL A EET+ + RW+ Sbjct: 498 GWELTVVRHGRFAAAAHARRGVDPMPVVEAMVASAETVHPGPGPLPAASAEETSTLLRWI 557 Query: 586 AAPDVRIVRTAGQTDMGWATPIGAAG 611 P R+VR + W++P AG Sbjct: 558 ERPGSRLVRASAP----WSSPAAGAG 579 >tr|D5UFG9|D5UFG9_9CELL Tax_Id=446466 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Cellulomonas flavigena DSM 20109] Length = 631 Score = 487 bits (1254), Expect = e-135 Identities = 304/601 (50%), Positives = 356/601 (59%), Gaps = 32/601 (5%) Query: 23 AIATPSDPSGAAR-----RAMSVGFPNVIAMSQRSTAVGAQLSLDMELERDVSLADTTFV 77 A T SD G+ R R + P V A A G Q++LD E L+D TFV Sbjct: 13 ACTTLSDVVGSVRAMSSPRRLRPSHPEVPAPG----ATGVQVALD---ELGTPLSDVTFV 65 Query: 78 VVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGI 137 VVDLETTGGRA DAITEIGAVKVRGGEVLGE TLVDPG +PP I LTGI Sbjct: 66 VVDLETTGGRAAE-------DAITEIGAVKVRGGEVLGEFQTLVDPGGPVPPFIQVLTGI 118 Query: 138 TTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVK 197 TT+M+ AP I VLP FLEFARGAVLVAHNA FD+GFLRAAA R++ WP V+ TV+ Sbjct: 119 TTSMLVGAPTIGEVLPSFLEFARGAVLVAHNAPFDVGFLRAAAARSERAWPGFQVVDTVR 178 Query: 198 LARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTLA 257 LARRV+ RDEAP+ +LS LA LFGA+ TP HRAL DARATVDVLH L+ R+ GV L Sbjct: 179 LARRVVLRDEAPNHKLSTLAALFGATVTPNHRALADARATVDVLHALLGRLAPLGVTHLE 238 Query: 258 DLRAYLPDTTPAQ-RRNRALADGLPNRPGVYLFRGPSDEVLYVG-TAVDLRRRVRQYFTG 315 DL A D PA RR LADGLP+ PGVYLFRGP DEVLYVG + LRRRVR YFT Sbjct: 239 DL-ATATDPVPADVRRRSTLADGLPDAPGVYLFRGPRDEVLYVGVSTTSLRRRVRSYFTS 297 Query: 316 ADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTD 375 A+ R RM+EM LA RVD V CA LEA VRELRL+A HAP YNRRS+AP+R WV LTD Sbjct: 298 AEKRGRMQEMVRLAVRVDPVVCATPLEARVRELRLIAEHAPRYNRRSRAPERMPWVRLTD 357 Query: 376 EPFPRLSAVRDPRHRKA-IGPFSARSDAVETADLLARFTGVRTCTSRF---GATGIHRCP 431 EPFPRLS VR+ R +A IGPF++R+ A + D L VR CT R + H C Sbjct: 358 EPFPRLSVVREVREGRAHIGPFASRALAQQAVDALHATFPVRQCTGRLPVVPSADAHACV 417 Query: 432 ERELSPC--PATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAAR 489 E+ C P T V + I LAA R+E+AA Sbjct: 418 LAEVGRCGAPCTGGQDVAAYAPVAAAVRDAMTGDPRDVAQAHAVRIRTLAAQERFEEAAT 477 Query: 490 VRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGAGTARRGVPP 549 VRD + R QR + ELVAARR +GGW +VR+G+ AG R P Sbjct: 478 VRDRLTSYVRGAGRAQRHARAAACRELVAARRTDDGGWELLLVRHGRFAGTAVVDRRTDP 537 Query: 550 MPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGA 609 P V A+ A + V + P A EET L+ WL P VR+V G+ W++P + Sbjct: 538 RPAVAALRAGGEHVTASVPPATAAHPEETDLLLAWLEQPGVRLVEVDGE----WSSPARS 593 Query: 610 A 610 A Sbjct: 594 A 594 >tr|D1A8X2|D1A8X2_THECD Tax_Id=471852 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Thermomonospora curvata] Length = 605 Score = 479 bits (1234), Expect = e-133 Identities = 291/575 (50%), Positives = 343/575 (59%), Gaps = 37/575 (6%) Query: 54 AVGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEV 113 A G Q +LD + L D TFVVVDLETTGG +A ITE+GAVKVRGGE Sbjct: 25 ARGVQGTLD---DLGTPLVDVTFVVVDLETTGGSPADSA-------ITEVGAVKVRGGER 74 Query: 114 LGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDI 173 LGE ATLVDPG IPP I LTGIT MV +AP + AVLP FLEFARG VLVAHNA FDI Sbjct: 75 LGEFATLVDPGVPIPPFITALTGITQQMVTNAPPMSAVLPAFLEFARGCVLVAHNAPFDI 134 Query: 174 GFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDD 233 GFLRAA WP PV+ T LARRVLTR+E P+ +L+ LAR F T P HRAL D Sbjct: 135 GFLRAACTAHDHPWPAFPVVDTADLARRVLTREEVPNCKLATLARYFRTGTEPCHRALAD 194 Query: 234 ARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPS 293 ARATVDVLHGLIER+G+ GVH+L +LRA+ TP QRR R LADG+P+ PGVYLF Sbjct: 195 ARATVDVLHGLIERLGSYGVHSLEELRAFAKTPTPEQRRKRHLADGMPSAPGVYLFEDAR 254 Query: 294 DEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAA 353 EVLYVG + DLR RVR YFT ++ R R++EM LA RV + CA LEA VRELRL+A Sbjct: 255 GEVLYVGKSNDLRARVRSYFTASETRRRIREMVGLAERVRPIVCATALEAEVRELRLIAE 314 Query: 354 HAPPYNRRSKAPKRWWWVALT-DEPFPRLSAVRDPRHRKAI--GPFSARSDAVETADLLA 410 H P YNRRSK P+R W+ LT E FPRLS VRD R +A+ GPF + A E L Sbjct: 315 HKPRYNRRSKFPERTLWLKLTVGETFPRLSIVRDCRDEQAVYLGPFGSLRQAEEARAALH 374 Query: 411 RFTGVRTCTSRFG------------ATG-IHRCPERELSPCPATQSXXXXXXXXXXXXXX 457 +R CT R A G I RC +PC QS Sbjct: 375 EAVPLRQCTQRLTPRLIAHGRARTCALGQIGRCG----APCEGRQS--ADVYLRHVETAR 428 Query: 458 XXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELV 517 V+A + I++LA RYE+AA RD A + RGQRL L P+LV Sbjct: 429 SIMEGDVRPVVAAARVRIDRLAVQLRYEEAAAQRDRLAAFVRAAARGQRLAALARCPQLV 488 Query: 518 AARRDGNGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEE 577 AAR GGW AVVR+G+LA AGT +G P P V+A A A+ V+P P+GGA+ EE Sbjct: 489 AARPAFGGGWELAVVRHGRLAAAGTVPQGASPWPHVEAAVATAETVIPGPGPVGGAIPEE 548 Query: 578 TALIARWLAAPDVRIVRTAGQTDMGWATPI-GAAG 611 + RWL P R+V G W++P+ GA G Sbjct: 549 VECVLRWLEGPGTRLVELEGT----WSSPVHGAEG 579 >tr|D1SDJ6|D1SDJ6_9ACTO Tax_Id=644283 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Micromonospora aurantiaca ATCC 27029] Length = 584 Score = 477 bits (1228), Expect = e-132 Identities = 281/544 (51%), Positives = 331/544 (60%), Gaps = 17/544 (3%) Query: 74 TTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVE 133 TTFVVVDLETTGG AP G ITEIGAVKVRGGE LG LATLV+PG IPP I Sbjct: 30 TTFVVVDLETTGG-----APDG--GGITEIGAVKVRGGEELGVLATLVNPGVPIPPFITV 82 Query: 134 LTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVL 193 LTGIT AM+ AP I+ VLP FLEF AVLVAHNA +D+GFL+AA + WP P VL Sbjct: 83 LTGITQAMLLPAPPIEQVLPSFLEFVSDAVLVAHNAPYDVGFLKAACAKHGYRWPNPRVL 142 Query: 194 CTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGV 253 T LARRVLTRDE P+ +L LA F +T PTHRALDDA+ATVDVLHGLI R+G V Sbjct: 143 DTAALARRVLTRDEVPNRKLGTLAAYFRTATQPTHRALDDAKATVDVLHGLIGRLGGHRV 202 Query: 254 HTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYF 313 T+ + + TP QRR R LADGLP PGVY+FR D LYVGT+ D+ RVR YF Sbjct: 203 GTVGEAIEFARAVTPTQRRKRHLADGLPKVPGVYIFRAADDRPLYVGTSGDIATRVRSYF 262 Query: 314 TGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVAL 373 T A+ RAR+ EM + A RV+ VECAH LEA VRELRL+AAHAPPYNRRSK P+R W+ L Sbjct: 263 TAAEKRARISEMLAAAERVEAVECAHSLEAEVRELRLIAAHAPPYNRRSKYPERQVWLKL 322 Query: 374 TDEPFPRLSAVRD--PRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFG-ATGIHRC 430 TDE +PRLS VRD P +GPF +R A A +R CT R T + C Sbjct: 323 TDEAYPRLSIVRDIAPTDTAYLGPFRSRQAAELAAAGFHDAVPLRQCTHRLSRRTTMPAC 382 Query: 431 PERELSPCPAT---QSXXXXXXXXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKA 487 EL CPA + V+ +L IE L+A RYE+A Sbjct: 383 ALAELGRCPAPCEHRITPEEYDDAAATPFRTATSDDPGVVVDALLARIEVLSAAERYEEA 442 Query: 488 ARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGAGTARRGV 547 A VR + R QRL LT + EL AAR GGW A+VR+G+LAGAG + GV Sbjct: 443 AVVRGRLVAVLRAAVRMQRLAALTGIAELAAARPAARGGWELALVRHGRLAGAGVSPPGV 502 Query: 548 PPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPI 607 P P + AI A A+ V+P P+ A EET I WL P+ R+V + TD GWA+P+ Sbjct: 503 HPRPTIAAIRATAETVLPGHGPVPAATAEETERILSWLERPETRLVES---TD-GWASPV 558 Query: 608 GAAG 611 AG Sbjct: 559 AGAG 562 >tr|D3C9W5|D3C9W5_9ACTO Tax_Id=648999 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Micromonospora sp. L5] Length = 584 Score = 475 bits (1223), Expect = e-132 Identities = 282/544 (51%), Positives = 330/544 (60%), Gaps = 17/544 (3%) Query: 74 TTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVE 133 TTFVVVDLETTGG AP G ITEIGAVKVRGGE LG LATLV+PG IPP I Sbjct: 30 TTFVVVDLETTGG-----APDG--GGITEIGAVKVRGGEELGVLATLVNPGVPIPPFITV 82 Query: 134 LTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVL 193 LTGIT AM+ AP I+ VLP FLEF AVLVAHNA +D+GFL+AA + WP P VL Sbjct: 83 LTGITQAMLLPAPPIEQVLPSFLEFISDAVLVAHNAPYDVGFLKAACAKHGYRWPNPRVL 142 Query: 194 CTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGV 253 T LARRVLTRDE P+ +L LA F +T PTHRALDDA+ATVDVLHGLI R+G V Sbjct: 143 DTAALARRVLTRDEVPNRKLGTLAAYFRTATQPTHRALDDAKATVDVLHGLIGRLGGHRV 202 Query: 254 HTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYF 313 T+ + + TP QRR R LADGLP PGVY+FR D LYVGT+ D+ RVR YF Sbjct: 203 GTVGEAIEFARAVTPTQRRKRHLADGLPKVPGVYIFRAADDRPLYVGTSGDIATRVRSYF 262 Query: 314 TGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVAL 373 T A+ RAR+ EM + A RV+ VECAH LEA VRELRL+AAHAPPYNRRSK P+R W+ L Sbjct: 263 TAAEKRARISEMLAAAERVEAVECAHSLEAEVRELRLIAAHAPPYNRRSKYPERQVWLKL 322 Query: 374 TDEPFPRLSAVR--DPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFG-ATGIHRC 430 TDE +PRLS VR P +GPF +R A A +R CT R T + C Sbjct: 323 TDEAYPRLSIVRALAPTDTAYLGPFRSRQAAELAAAGFHDAVPLRQCTHRLSRRTTMPAC 382 Query: 431 PERELSPCPA--TQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLM-HIEKLAADSRYEKA 487 EL CPA V+ D L+ IE L+A RYE+A Sbjct: 383 ALAELGRCPAPCEHKITPEEYDDAAATPFRTATSDDPGVVVDALLARIEVLSAARRYEEA 442 Query: 488 ARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGAGTARRGV 547 A VR + R QRL LT + EL AAR GGW A+VR+G+LAGAG + GV Sbjct: 443 AVVRGRLVAVLRAAVRMQRLAALTGIAELAAARPAARGGWELALVRHGRLAGAGVSPPGV 502 Query: 548 PPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPI 607 P P + AI A A+ V+P P+ A EET I WL P+ R+V T TD GWA+P+ Sbjct: 503 HPRPTIAAIRATAETVLPGHGPVPAATAEETERILSWLERPETRLVET---TD-GWASPV 558 Query: 608 GAAG 611 AG Sbjct: 559 AGAG 562 >tr|D3D8I8|D3D8I8_9ACTO Tax_Id=102897 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Frankia sp. EUN1f] Length = 565 Score = 475 bits (1222), Expect = e-131 Identities = 285/564 (50%), Positives = 348/564 (61%), Gaps = 18/564 (3%) Query: 51 RSTAVGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRG 110 RS A Q SL +L R +S D TFVVVDLETTGG + AT+ ITEIGAVKVRG Sbjct: 7 RSGAAPRQASL-ADLGRPLS--DLTFVVVDLETTGG-SPATSE------ITEIGAVKVRG 56 Query: 111 GEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAG 170 G+VLGE+++LV IPP + LTGIT +M+ AP +D V+P FLEF+RGAVLVAHNA Sbjct: 57 GQVLGEMSSLVRASTPIPPVVSVLTGITDSMLATAPTLDEVVPTFLEFSRGAVLVAHNAA 116 Query: 171 FDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRA 230 FD+GFLRAAA+ P L TV +ARRV+TRDEAP+ RL+ LA LFG+ T P HRA Sbjct: 117 FDLGFLRAAAQACGYPVPAWEHLDTVLIARRVVTRDEAPNCRLASLATLFGSPTEPNHRA 176 Query: 231 LDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFR 290 L DARATV VLHGL ER+GN GV TL D+R Y +PAQRR R LAD LP PGVY+FR Sbjct: 177 LADARATVAVLHGLFERLGNLGVTTLEDVREYSARVSPAQRRKRHLADDLPTGPGVYVFR 236 Query: 291 GPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRL 350 +D LYVGT+ +R RVR YFT ++PR+RM +M +LA RVD + CAH LEA VRELRL Sbjct: 237 DGADRPLYVGTSRSVRSRVRTYFTASEPRSRMAQMVALAERVDAIGCAHALEAEVRELRL 296 Query: 351 LAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKA-IGPFSARSDAVETADLL 409 +A H PP+NRRS+ P+R ++ LTDE FPRLS VR +GPF + A E L Sbjct: 297 IAEHKPPFNRRSRHPERAVYLRLTDELFPRLSRVRSVGDGVTYLGPFGSTQAAQEAEIAL 356 Query: 410 ARFTGVRTCTSRFG-ATGIHRCPERELSPC--PATQSXXXXXXXXXXXXXXXXXXXXXSA 466 +R C++R + C EL C P A Sbjct: 357 LAAVPLRQCSARLSPSRPTAACALAELGRCGAPCDGRQGVAEYAEVVGAAREAMSGDPGA 416 Query: 467 VLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGG 526 V + HI +LAA+ RYE+AA VRD A + T R QRL LT +PE+VAA + G Sbjct: 417 VQESLEAHIARLAAEQRYEQAAEVRDRLAGYLRTAARRQRLAALTGIPEMVAAAPTADAG 476 Query: 527 WHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLA 586 W +V+R+G+L A T RGV P P VDA+ A A+ V P P ALVEET I RWLA Sbjct: 477 WDLSVIRHGRLVSAATVARGVDPRPWVDAVVATAETVRPAPGPTPCALVEETERIGRWLA 536 Query: 587 APDVRIVRTAGQTDMGWATPIGAA 610 AP VR+VR G+ W+ P A Sbjct: 537 APGVRLVRLEGE----WSWPAQGA 556 >tr|Q0RFJ5|Q0RFJ5_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-directed DNA polymerase; EC=2.7.7.7;[Frankia alni] Length = 580 Score = 474 bits (1219), Expect = e-131 Identities = 281/557 (50%), Positives = 336/557 (60%), Gaps = 18/557 (3%) Query: 58 QLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGEL 117 Q SLD EL R +S D TFVVVDLETTG A + ITEIGAV+VRGGEVL E+ Sbjct: 6 QASLD-ELGRPLS--DLTFVVVDLETTGTSAATSE-------ITEIGAVRVRGGEVLAEM 55 Query: 118 ATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLR 177 +TLV P IPP + +TGIT AMV AP V+P FLEFARGAVLVAHNA FD+GFLR Sbjct: 56 STLVRPSAGIPPMVSVITGITDAMVATAPAEAEVVPTFLEFARGAVLVAHNAPFDLGFLR 115 Query: 178 AAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARAT 237 AAA+R P L T+++ARR+++RDEAP RL+ LARLF +ST P HRAL DARAT Sbjct: 116 AAAQRCGYPPPAWEHLDTLRIARRLVSRDEAPDCRLASLARLFRSSTEPCHRALADARAT 175 Query: 238 VDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVL 297 VDVLHGL ER+GN GV TL +L Y +PAQRR R LADGLP PGVY+FR L Sbjct: 176 VDVLHGLFERLGNAGVRTLEELHEYSARVSPAQRRKRYLADGLPTGPGVYIFRDADGRAL 235 Query: 298 YVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPP 357 YVGT+ +R RVR YFT ++PR RM EM +LA RVD + CAH LEA VRELRL+A H PP Sbjct: 236 YVGTSRSVRSRVRTYFTASEPRTRMAEMVALAERVDAIGCAHALEAEVRELRLIAEHKPP 295 Query: 358 YNRRSKAPKRWWWVALTDEPFPRLSAVRDPRHRKA-IGPFSARSDAVETADLLARFTGVR 416 YNRRS+ P+R ++ LTDEPFPRLS VR R +GPF++ A + AD L +R Sbjct: 296 YNRRSRFPERTVYLKLTDEPFPRLSRVRAARDEATYLGPFASTRGADDAADALLAAVPLR 355 Query: 417 TCTSRFGATGIH-RCPERELSPC--PATQSXXXXXXXXXXXXXXXXXXXXXSAVLADVLM 473 CT R C +L C P V+A Sbjct: 356 QCTGRLSPRARRPACALADLGRCGAPCDGREDVAAYARHVAAARAAITGDPGPVIAASTR 415 Query: 474 HIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVR 533 I++LA + RYE+AA RD + RGQRL LT +P+LVAA GW AVVR Sbjct: 416 RIDRLAGERRYEEAAVHRDRMVSFVRAAARGQRLAALTRIPQLVAAAPTAQAGWDLAVVR 475 Query: 534 YGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIV 593 +G+L A G+ P P VDA A+A+ V P P A VEET IARWLA VR+V Sbjct: 476 HGRLVSAANVAPGIDPRPWVDAAVASAETVRPQPGPAPCASVEETERIARWLAGSGVRLV 535 Query: 594 RTAGQTDMGWATPIGAA 610 R G+ W+ P A Sbjct: 536 RLDGE----WSWPAAGA 548 >tr|C5C5G5|C5C5G5_BEUC1 Tax_Id=471853 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Beutenbergia cavernae] Length = 590 Score = 473 bits (1216), Expect = e-131 Identities = 286/581 (49%), Positives = 335/581 (57%), Gaps = 31/581 (5%) Query: 43 PNVIAMSQRSTAVGAQLSLDMELERDVSLADTTFVVVDLETTGGRAKATAPGGLCDAITE 102 P+ + + + Q +LD E LA+ FVVVDLETTGG A DAITE Sbjct: 2 PSATSPAAPGRGLAVQHALD---ELGTPLAEVAFVVVDLETTGGSPNA-------DAITE 51 Query: 103 IGAVKVRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIDAVLPMFLEFARGA 162 IGAV+VRGG V GEL TLVDPGR+IPP I LTGIT AMV AP I+ VLP FLEFA GA Sbjct: 52 IGAVRVRGGVVEGELGTLVDPGRSIPPTITVLTGITNAMVIGAPPIEEVLPSFLEFAHGA 111 Query: 163 VLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGA 222 VLVAHNA FD GFLR AAER LTWP+P V+ TV+LARRV++RDEAP+ RL LARLF A Sbjct: 112 VLVAHNARFDTGFLRVAAERMGLTWPKPLVVDTVQLARRVVSRDEAPNHRLGSLARLFHA 171 Query: 223 STTPTHRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPN 282 S TP HRAL DARATVDVLHGL+ R+ GV L DLR P +RR LADGLP Sbjct: 172 SVTPDHRALTDARATVDVLHGLLARMAPLGVTHLEDLRTAGDSVPPERRRKVTLADGLPA 231 Query: 283 RPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLATRVDHVECAHDLE 342 PGVY F GP VLYVGTA +LR RVR YFT ++ RAR+ EM +A RV + CA LE Sbjct: 232 APGVYQFLGPQGRVLYVGTATNLRTRVRSYFTASEKRARIGEMLRIAERVHPIVCATPLE 291 Query: 343 AGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDEPFPRLSAVRD-PRHRK--AIGPFSAR 399 A VRELRL+A H+PPYNRRS+AP+R W+ LTDE +PRLS VR+ PR AIGPF R Sbjct: 292 AAVRELRLIAEHSPPYNRRSRAPEREPWIRLTDEAYPRLSVVREVPRSHAGAAIGPFRTR 351 Query: 400 SDAVETADLLARFTGVRTCTSRFGATGIHRCPERELSPC----------PATQSXXXXXX 449 A + L +R C+ R + R P + SPC P Sbjct: 352 RLAQLALEALHGAFPLRQCSPR-----LPRVPRADASPCVLAELGRCGAPCVGRIDEPGY 406 Query: 450 XXXXXXXXXXXXXXXSAVLADVLMHIEKLAADSRYEKAARVRDHAAVAIDTLWRGQRLQT 509 V+A V I LA RYE AAR RD + R RL Sbjct: 407 DTVVADVRAVLAGDVEPVVATVRSRIAALAGSERYEDAARERDRLTALLRGSARAARLGG 466 Query: 510 LTSLPELVAARRDGNGGWHFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVMPTAEP 569 L ++AARR +GGW RYG+LAG RG M +DA+ A A+ V Sbjct: 467 LADASHVLAARRTDDGGWELVCARYGRLAGVCVVPRGADVMGAIDAVRATAEHVPAPERW 526 Query: 570 LGGALVEETALIARWLAAPDVRIVRTAGQTDMGWATPIGAA 610 G A EET L+ WL P VR+V AG GW+ P+ A Sbjct: 527 CGAASAEETELVLTWLERPGVRLVELAG---AGWSAPVRGA 564 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.320 0.134 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 5,126,201,597 Number of extensions: 204969065 Number of successful extensions: 540204 Number of sequences better than 10.0: 6920 Number of HSP's gapped: 535928 Number of HSP's successfully gapped: 6927 Length of query: 672 Length of database: 4,236,830,644 Length adjustment: 145 Effective length of query: 527 Effective length of database: 2,423,190,364 Effective search space: 1277021321828 Effective search space used: 1277021321828 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 84 (37.0 bits)