BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_4268 (341 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R057|A0R057_MYCS2 Tax_Id=246196 SubName: Full=Cytochrome c ... 653 0.0 tr|A4TBI6|A4TBI6_MYCGI Tax_Id=350054 SubName: Full=Cytochrome c ... 537 e-151 tr|A1TB08|A1TB08_MYCVP Tax_Id=350058 SubName: Full=Cytochrome c ... 531 e-149 sp|P63854|COX2_MYCTU Tax_Id=1773 (ctaC)RecName: Full=Cytochrome ... 512 e-143 sp|P63855|COX2_MYCBO Tax_Id=1765 (ctaC)RecName: Full=Cytochrome ... 512 e-143 tr|C6DPK8|C6DPK8_MYCTK Tax_Id=478434 SubName: Full=Transmembrane... 512 e-143 tr|C1AQB5|C1AQB5_MYCBT Tax_Id=561275 (ctaC)SubName: Full=Putativ... 512 e-143 tr|A5WPH0|A5WPH0_MYCTF Tax_Id=336982 SubName: Full=Transmembrane... 512 e-143 tr|A5U4M8|A5U4M8_MYCTA Tax_Id=419947 (ctaC)SubName: Full=Cytochr... 512 e-143 tr|A1KKP2|A1KKP2_MYCBP Tax_Id=410289 (ctaC)SubName: Full=Probabl... 512 e-143 tr|D6G631|D6G631_MYCTU Tax_Id=478435 SubName: Full=Transmembrane... 512 e-143 tr|D6FWM1|D6FWM1_MYCTU Tax_Id=611304 SubName: Full=Transmembrane... 512 e-143 tr|D6FI96|D6FI96_MYCTU Tax_Id=611303 SubName: Full=Transmembrane... 512 e-143 tr|D6F5Y1|D6F5Y1_MYCTU Tax_Id=611302 SubName: Full=Transmembrane... 512 e-143 tr|D5YS07|D5YS07_MYCTU Tax_Id=515616 SubName: Full=Cytochrome c ... 512 e-143 tr|D5YH29|D5YH29_MYCTU Tax_Id=520140 SubName: Full=Transmembrane... 512 e-143 tr|D5Y5N4|D5Y5N4_MYCTU Tax_Id=520141 SubName: Full=Putative unch... 512 e-143 tr|D5XUW4|D5XUW4_MYCTU Tax_Id=515617 SubName: Full=Transmembrane... 512 e-143 tr|A2VJU1|A2VJU1_MYCTU Tax_Id=348776 SubName: Full=Transmembrane... 512 e-143 tr|D5Z569|D5Z569_MYCTU Tax_Id=537209 SubName: Full=Heme/copper-t... 511 e-143 tr|B2HGW8|B2HGW8_MYCMM Tax_Id=216594 (ctaC)SubName: Full=Transme... 501 e-140 tr|A0PTN4|A0PTN4_MYCUA Tax_Id=362242 (ctaC)SubName: Full=Transme... 499 e-139 sp|Q9CCF1|COX2_MYCLE Tax_Id=1769 (ctaC)RecName: Full=Probable cy... 495 e-138 tr|B8ZQL4|B8ZQL4_MYCLB Tax_Id=561304 (ctaC)SubName: Full=Putativ... 495 e-138 sp|Q73YL5|COX2_MYCPA Tax_Id=1770 (ctaC)RecName: Full=Probable cy... 493 e-137 tr|A0QF07|A0QF07_MYCA1 Tax_Id=243243 SubName: Full=Cytochrome c ... 493 e-137 tr|D5P715|D5P715_9MYCO Tax_Id=525368 (ctaC)SubName: Full=Cytochr... 491 e-137 tr|Q1B6S9|Q1B6S9_MYCSS Tax_Id=164756 SubName: Full=Cytochrome c ... 486 e-135 tr|A3Q1R0|A3Q1R0_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome c ... 486 e-135 tr|A1UI96|A1UI96_MYCSK Tax_Id=189918 SubName: Full=Cytochrome c ... 486 e-135 tr|B1MNZ2|B1MNZ2_MYCA9 Tax_Id=561007 SubName: Full=Probable cyto... 472 e-131 tr|D5ZG97|D5ZG97_MYCTU Tax_Id=537210 SubName: Full=Transmembrane... 440 e-121 tr|C3JJA0|C3JJA0_RHOER Tax_Id=596309 SubName: Full=Cytochrome c ... 395 e-108 tr|C1A125|C1A125_RHOE4 Tax_Id=234621 (ctaC)SubName: Full=Cytochr... 394 e-108 tr|D5PP91|D5PP91_COREQ Tax_Id=525370 (ctaC)SubName: Full=Cytochr... 391 e-107 sp|Q5YZ37|COX2_NOCFA Tax_Id=37329 (ctaC)RecName: Full=Probable c... 387 e-106 tr|Q0SHM2|Q0SHM2_RHOSR Tax_Id=101510 SubName: Full=Probable cyto... 384 e-104 tr|C1AUA4|C1AUA4_RHOOB Tax_Id=632772 (ctaC)SubName: Full=Cytochr... 383 e-104 tr|D0LAX5|D0LAX5_GORB4 Tax_Id=526226 SubName: Full=Cytochrome c ... 360 1e-97 tr|D5UY53|D5UY53_TSUPA Tax_Id=521096 SubName: Full=Cytochrome c ... 323 3e-86 tr|A4QFR0|A4QFR0_CORGB Tax_Id=340322 RecName: Full=Cytochrome c ... 313 2e-83 tr|C6RAZ9|C6RAZ9_9CORY Tax_Id=553206 SubName: Full=Putative cyto... 313 2e-83 tr|C2BNF6|C2BNF6_9CORY Tax_Id=525264 (ctaC)SubName: Full=Cytochr... 313 3e-83 tr|C8RRE5|C8RRE5_CORJE Tax_Id=525262 (ctaC)RecName: Full=Cytochr... 312 4e-83 tr|Q4JWC9|Q4JWC9_CORJK Tax_Id=306537 (ctaC)RecName: Full=Cytochr... 311 6e-83 >tr|A0R057|A0R057_MYCS2 Tax_Id=246196 SubName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Mycobacterium smegmatis] Length = 341 Score = 653 bits (1685), Expect = 0.0 Identities = 323/341 (94%), Positives = 323/341 (94%) Query: 1 MTPRGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAV 60 MTPRGFRVVA DALALGWPTGITPEAKLNRELWIGSVIASFAV Sbjct: 1 MTPRGFRVVALSIVLGGSALLLSGCSWSDALALGWPTGITPEAKLNRELWIGSVIASFAV 60 Query: 61 GAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERM 120 GAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERM Sbjct: 61 GAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERM 120 Query: 121 MHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIE 180 MHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIE Sbjct: 121 MHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIE 180 Query: 181 KVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFL 240 KVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFL Sbjct: 181 KVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFL 240 Query: 241 FKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYI 300 FKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYI Sbjct: 241 FKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYI 300 Query: 301 DQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQASK 341 DQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQASK Sbjct: 301 DQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQASK 341 >tr|A4TBI6|A4TBI6_MYCGI Tax_Id=350054 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium gilvum] Length = 344 Score = 537 bits (1383), Expect = e-151 Identities = 258/338 (76%), Positives = 285/338 (84%) Query: 1 MTPRGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAV 60 M+ RG ++VA + L LGWP GITPEA NRELWIGSVIA+F V Sbjct: 1 MSARGLKLVALSLLLGGMTVLLSGCSWSEVLGLGWPNGITPEAHANRELWIGSVIAAFVV 60 Query: 61 GAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERM 120 G IV+ L FWT+ FHRKKATDTELPRQFGYNMPLELTLTVIPF+IISVLFYFTVVVQE M Sbjct: 61 GGIVYVLTFWTTIFHRKKATDTELPRQFGYNMPLELTLTVIPFIIISVLFYFTVVVQEEM 120 Query: 121 MHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIE 180 + K+PNPEVVIDVTAFQWNWKFGYQK+ FADG+ YDG D ERKEAMTS PEG DEHGIE Sbjct: 121 LKKEPNPEVVIDVTAFQWNWKFGYQKVEFADGTMSYDGVDNERKEAMTSAPEGADEHGIE 180 Query: 181 KVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFL 240 ++G I G PEDRTYLNFDKIETLG+S+EIPVLV+P+GKRIEF + SADVIHGFWVPEFL Sbjct: 181 QIGAIAGKRPEDRTYLNFDKIETLGSSTEIPVLVVPSGKRIEFQIASADVIHGFWVPEFL 240 Query: 241 FKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYI 300 FKRDVLP PK NNSDN+FQVSEI QTGAFVGRCTEMCGT+HAMMNFE+RVVEPNDFKAY+ Sbjct: 241 FKRDVLPNPKENNSDNIFQVSEIMQTGAFVGRCTEMCGTYHAMMNFELRVVEPNDFKAYL 300 Query: 301 DQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 QR AGKTNAEAL AINQ PLA+TT+PF++RRGEL PQ Sbjct: 301 AQREAGKTNAEALRAINQEPLAVTTKPFDTRRGELAPQ 338 >tr|A1TB08|A1TB08_MYCVP Tax_Id=350058 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 344 Score = 531 bits (1368), Expect = e-149 Identities = 255/338 (75%), Positives = 286/338 (84%) Query: 1 MTPRGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAV 60 M+ RG ++VA + L LGWP GITPEA LNRELWIGSVIA+ V Sbjct: 1 MSARGLKLVALSLLLGGTTVLLSGCSWSEVLGLGWPNGITPEAHLNRELWIGSVIAALVV 60 Query: 61 GAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERM 120 GAIV+ L+FWT AFHRKK DTELPRQFGYNMPLELTLTVIPF+IISVLFYFTVVVQE+M Sbjct: 61 GAIVYVLLFWTMAFHRKKKGDTELPRQFGYNMPLELTLTVIPFIIISVLFYFTVVVQEKM 120 Query: 121 MHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIE 180 +HK+ NPEVVIDVTA+QWNWKFGYQK+ FADG+ YDG D RKEAM SRPEG D HG + Sbjct: 121 VHKEDNPEVVIDVTAYQWNWKFGYQKVDFADGTLTYDGEDNARKEAMVSRPEGVDSHGND 180 Query: 181 KVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFL 240 +VG I G PEDR+YLNFDKIETLG+S+EIPVLV+PAGKRIEF + SADVIHGFWVPEFL Sbjct: 181 RVGAIYGKNPEDRSYLNFDKIETLGSSTEIPVLVVPAGKRIEFEIASADVIHGFWVPEFL 240 Query: 241 FKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYI 300 FKRDV+P P+ NNSDNVFQ+SEI QTGAFVGRCTEMCGT+HAMMNFE+RVVEPNDFKAY+ Sbjct: 241 FKRDVMPNPEENNSDNVFQISEINQTGAFVGRCTEMCGTYHAMMNFELRVVEPNDFKAYL 300 Query: 301 DQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 DQR+AGKTNAEAL AINQPPLAITT+PF++RRGEL PQ Sbjct: 301 DQRSAGKTNAEALLAINQPPLAITTKPFDTRRGELAPQ 338 >sp|P63854|COX2_MYCTU Tax_Id=1773 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; AltName: Full=Mtb92; Flags: Precursor;[Mycobacterium tuberculosis] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >sp|P63855|COX2_MYCBO Tax_Id=1765 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; Flags: Precursor;[Mycobacterium bovis] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|C6DPK8|C6DPK8_MYCTK Tax_Id=478434 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|C1AQB5|C1AQB5_MYCBT Tax_Id=561275 (ctaC)SubName: Full=Putative transmembrane cytochrome c oxidase subunit II; EC=1.9.3.1;[Mycobacterium bovis] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|A5WPH0|A5WPH0_MYCTF Tax_Id=336982 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|A5U4M8|A5U4M8_MYCTA Tax_Id=419947 (ctaC)SubName: Full=Cytochrome c oxidase subunit II;[Mycobacterium tuberculosis] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|A1KKP2|A1KKP2_MYCBP Tax_Id=410289 (ctaC)SubName: Full=Probable transmembrane cytochrome C oxidase (Subunit ii) ctaC; EC=1.9.3.1;[Mycobacterium bovis] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D6G631|D6G631_MYCTU Tax_Id=478435 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis KZN 605] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D6FWM1|D6FWM1_MYCTU Tax_Id=611304 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis K85] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D6FI96|D6FI96_MYCTU Tax_Id=611303 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis CPHL_A] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D6F5Y1|D6F5Y1_MYCTU Tax_Id=611302 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis T46] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D5YS07|D5YS07_MYCTU Tax_Id=515616 SubName: Full=Cytochrome c oxidase subunit II;[Mycobacterium tuberculosis 02_1987] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D5YH29|D5YH29_MYCTU Tax_Id=520140 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis EAS054] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D5Y5N4|D5Y5N4_MYCTU Tax_Id=520141 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T85] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D5XUW4|D5XUW4_MYCTU Tax_Id=515617 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC;[Mycobacterium tuberculosis T92] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|A2VJU1|A2VJU1_MYCTU Tax_Id=348776 SubName: Full=Transmembrane cytochrome C oxidase (Subunit II) ctaC;[Mycobacterium tuberculosis C] Length = 363 Score = 512 bits (1318), Expect = e-143 Identities = 244/335 (72%), Positives = 276/335 (82%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 26 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 85 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 86 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 145 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 146 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 205 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 206 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 265 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR 303 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR Sbjct: 266 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQR 325 Query: 304 NAGKTNAEALAAINQPPLAITTEPFESRRGELVPQ 338 GKTNAEAL AINQPPLA+TT PF++RRGEL PQ Sbjct: 326 IDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ 360 >tr|D5Z569|D5Z569_MYCTU Tax_Id=537209 SubName: Full=Heme/copper-type cytochrome/quinol oxidase;[Mycobacterium tuberculosis GM 1503] Length = 324 Score = 511 bits (1317), Expect = e-143 Identities = 240/310 (77%), Positives = 271/310 (87%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 +AL +GWP GITPEA LNRELWIG+VIAS AVG IVWGLIFW++ FHRKK TDTELPRQF Sbjct: 12 EALGIGWPEGITPEAHLNRELWIGAVIASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQF 71 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ +PEVVID+T+FQWNWKFGYQ++ Sbjct: 72 GYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVN 131 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DG+ YDGADPERK AM S+PEGKD++G E VGP+RG+ EDRTYLNFDK+ETLGTS+ Sbjct: 132 FKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVGPVRGLNTEDRTYLNFDKVETLGTST 191 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKRDV+P P ANNS NVFQ+ EI +TGA Sbjct: 192 EIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKRDVMPNPVANNSVNVFQIEEITKTGA 251 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR GKTNAEAL AINQPPLA+TT PF Sbjct: 252 FVGHCAEMCGTYHSMMNFEVRVVTPNDFKAYLQQRIDGKTNAEALRAINQPPLAVTTHPF 311 Query: 329 ESRRGELVPQ 338 ++RRGEL PQ Sbjct: 312 DTRRGELAPQ 321 >tr|B2HGW8|B2HGW8_MYCMM Tax_Id=216594 (ctaC)SubName: Full=Transmembrane cytochrome C oxidase (Subunit II) CtaC;[Mycobacterium marinum] Length = 367 Score = 501 bits (1290), Expect = e-140 Identities = 239/309 (77%), Positives = 263/309 (85%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 +ALALGWP GITPEA +NRELWIG+VIAS VG IVWGLIFW++ FHRKK TDT+ PRQF Sbjct: 55 EALALGWPEGITPEAHVNRELWIGAVIASLVVGVIVWGLIFWSATFHRKKKTDTDFPRQF 114 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTV PFLIISVLFYFTVVVQE+M+H +PEVV+DVTAFQWNWKFGYQK+ Sbjct: 115 GYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHLADDPEVVVDVTAFQWNWKFGYQKVD 174 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F D + YDGAD RK AM S+PEGKDEHG E VGP+ G EDRTYLNFDK+ETLGT+S Sbjct: 175 FHDHTLTYDGADEARKRAMESKPEGKDEHGEELVGPVAGRNTEDRTYLNFDKVETLGTTS 234 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLPAGKRIEF LNSADVIH FWVPEFLFKRDV+P P ANNS N FQV +I +TGA Sbjct: 235 EIPVLVLPAGKRIEFQLNSADVIHAFWVPEFLFKRDVMPNPAANNSVNRFQVEQITKTGA 294 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C EMCGT+H+MMNFEVRVV NDFKAY+ QR AGKTNAEAL AINQPPLAITT PF Sbjct: 295 FVGHCAEMCGTYHSMMNFEVRVVAANDFKAYLQQRIAGKTNAEALQAINQPPLAITTHPF 354 Query: 329 ESRRGELVP 337 E+RRG+ P Sbjct: 355 ETRRGQQAP 363 >tr|A0PTN4|A0PTN4_MYCUA Tax_Id=362242 (ctaC)SubName: Full=Transmembrane cytochrome C oxidase (Subunit II) CtaC;[Mycobacterium ulcerans] Length = 367 Score = 499 bits (1284), Expect = e-139 Identities = 239/309 (77%), Positives = 262/309 (84%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 +ALALGWP GITPEA +NRELWIG+VIAS VG IVWGLIFW++ FHRKK TDT+ PRQF Sbjct: 55 EALALGWPEGITPEAHVNRELWIGAVIASLVVGVIVWGLIFWSATFHRKKKTDTDFPRQF 114 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTV PFLIISVLFYFTVVVQERM+H +PEVV+DVTAFQWNWKFGYQK+ Sbjct: 115 GYNMPLELVLTVTPFLIISVLFYFTVVVQERMLHLADDPEVVVDVTAFQWNWKFGYQKVD 174 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F D + YDGA RK AM S+PEGKDEHG E VGP+ G EDRTYLNFDK+ETLGT+S Sbjct: 175 FHDHTLTYDGAVEARKRAMESKPEGKDEHGEELVGPVAGRNTEDRTYLNFDKVETLGTTS 234 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLPAGKRIEF LNSADVIH FWVPEFLFKRDV+P P ANNS N FQV +I +TGA Sbjct: 235 EIPVLVLPAGKRIEFQLNSADVIHAFWVPEFLFKRDVMPNPAANNSVNRFQVEQITKTGA 294 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C EMCGT+H+MMNFEVRVV NDFKAY+ QR AGKTNAEAL AINQPPLAITT PF Sbjct: 295 FVGHCAEMCGTYHSMMNFEVRVVAANDFKAYLQQRIAGKTNAEALQAINQPPLAITTHPF 354 Query: 329 ESRRGELVP 337 E+RRG+ P Sbjct: 355 ETRRGQQAP 363 >sp|Q9CCF1|COX2_MYCLE Tax_Id=1769 (ctaC)RecName: Full=Probable cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; Flags: Precursor;[Mycobacterium leprae] Length = 353 Score = 495 bits (1275), Expect = e-138 Identities = 230/307 (74%), Positives = 264/307 (85%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 DALA+GWP GITPEA LNR+LWIG+V+AS VG IVWGLIFW++ FHRKK TDTELPRQF Sbjct: 43 DALAIGWPEGITPEAHLNRQLWIGAVVASLVVGVIVWGLIFWSTIFHRKKTTDTELPRQF 102 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTV PFLIIS+LFYFTV+VQ++M++ +PEVVIDVTAFQWNWKFGYQ++ Sbjct: 103 GYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVD 162 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DG+ YDG DP RK+AM S+PEGKD HG E VG +RG+ EDR YLNFDK+ETLGT++ Sbjct: 163 FKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTT 222 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLPAGKRIEF LNSADV+H FWVP+FLFKRDV+P P ANNS NVFQV EI +TGA Sbjct: 223 EIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGA 282 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR GKTNAEAL I QPPLA+TT PF Sbjct: 283 FVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPF 342 Query: 329 ESRRGEL 335 ++RRG+L Sbjct: 343 DTRRGQL 349 >tr|B8ZQL4|B8ZQL4_MYCLB Tax_Id=561304 (ctaC)SubName: Full=Putative cytochrome C oxidase chain II; EC=1.9.3.1;[Mycobacterium leprae] Length = 353 Score = 495 bits (1275), Expect = e-138 Identities = 230/307 (74%), Positives = 264/307 (85%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 DALA+GWP GITPEA LNR+LWIG+V+AS VG IVWGLIFW++ FHRKK TDTELPRQF Sbjct: 43 DALAIGWPEGITPEAHLNRQLWIGAVVASLVVGVIVWGLIFWSTIFHRKKTTDTELPRQF 102 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTV PFLIIS+LFYFTV+VQ++M++ +PEVVIDVTAFQWNWKFGYQ++ Sbjct: 103 GYNMPLELVLTVTPFLIISMLFYFTVIVQDKMLYLAKDPEVVIDVTAFQWNWKFGYQRVD 162 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DG+ YDG DP RK+AM S+PEGKD HG E VG +RG+ EDR YLNFDK+ETLGT++ Sbjct: 163 FKDGTLTYDGVDPARKKAMVSKPEGKDSHGEELVGAVRGLNTEDRAYLNFDKVETLGTTT 222 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLPAGKRIEF LNSADV+H FWVP+FLFKRDV+P P ANNS NVFQV EI +TGA Sbjct: 223 EIPVLVLPAGKRIEFQLNSADVVHSFWVPKFLFKRDVMPNPVANNSVNVFQVEEITKTGA 282 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C EMCGT+H+MMNFEVRVV PNDFKAY+ QR GKTNAEAL I QPPLA+TT PF Sbjct: 283 FVGHCAEMCGTYHSMMNFEVRVVAPNDFKAYLQQRIDGKTNAEALQVIAQPPLAVTTHPF 342 Query: 329 ESRRGEL 335 ++RRG+L Sbjct: 343 DTRRGQL 349 >sp|Q73YL5|COX2_MYCPA Tax_Id=1770 (ctaC)RecName: Full=Probable cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2; Flags: Precursor;[Mycobacterium paratuberculosis] Length = 360 Score = 493 bits (1270), Expect = e-137 Identities = 234/307 (76%), Positives = 263/307 (85%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 DALALGWP GITP+A LNRELWIG+VIAS VGAIV+GLIFW SAFHRKKATDTELPRQF Sbjct: 50 DALALGWPKGITPQAHLNRELWIGAVIASLVVGAIVYGLIFWASAFHRKKATDTELPRQF 109 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTV PFLIISVLFYFTVVVQE+M+H +PEVV+DVTAFQWNWKFGYQK+ Sbjct: 110 GYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWNWKFGYQKVN 169 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DG+ YDGADPERK+AM S+PEGKD HG E+VG +RG+ DRTYLNFDK+ETLG+S Sbjct: 170 FKDGTLTYDGADPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSD 229 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLP GKRIEF L SADV+H FWVPEFLFKRDV+P +ANNS +VFQV EI GA Sbjct: 230 EIPVLVLPTGKRIEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGA 289 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C E CGT+H+MMNFEVRVV PNDFKAY+ QR GK+NAEAL AI Q P+A+TT PF Sbjct: 290 FVGHCAEFCGTYHSMMNFEVRVVSPNDFKAYLQQRMDGKSNAEALQAIGQSPVAVTTHPF 349 Query: 329 ESRRGEL 335 +S+RG+L Sbjct: 350 DSKRGQL 356 >tr|A0QF07|A0QF07_MYCA1 Tax_Id=243243 SubName: Full=Cytochrome c oxidase, subunit 2; EC=1.9.3.1;[Mycobacterium avium] Length = 336 Score = 493 bits (1270), Expect = e-137 Identities = 234/307 (76%), Positives = 263/307 (85%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 DALALGWP GITP+A LNRELWIG+VIAS VGAIV+GLIFW SAFHRKKATDTELPRQF Sbjct: 26 DALALGWPKGITPQAHLNRELWIGAVIASLVVGAIVYGLIFWASAFHRKKATDTELPRQF 85 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTV PFLIISVLFYFTVVVQE+M+H +PEVV+DVTAFQWNWKFGYQK+ Sbjct: 86 GYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHIAKDPEVVVDVTAFQWNWKFGYQKVN 145 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DG+ YDGADPERK+AM S+PEGKD HG E+VG +RG+ DRTYLNFDK+ETLG+S Sbjct: 146 FKDGTLTYDGADPERKKAMVSKPEGKDAHGEERVGAVRGLNTSDRTYLNFDKVETLGSSD 205 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLP GKRIEF L SADV+H FWVPEFLFKRDV+P +ANNS +VFQV EI GA Sbjct: 206 EIPVLVLPTGKRIEFDLASADVVHTFWVPEFLFKRDVIPNAEANNSIHVFQVEEINSPGA 265 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C E CGT+H+MMNFEVRVV PNDFKAY+ QR GK+NAEAL AI Q P+A+TT PF Sbjct: 266 FVGHCAEFCGTYHSMMNFEVRVVSPNDFKAYLQQRMDGKSNAEALQAIGQSPVAVTTHPF 325 Query: 329 ESRRGEL 335 +S+RG+L Sbjct: 326 DSKRGQL 332 >tr|D5P715|D5P715_9MYCO Tax_Id=525368 (ctaC)SubName: Full=Cytochrome c oxidase, subunit II; EC=1.9.3.1;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 370 Score = 491 bits (1265), Expect = e-137 Identities = 229/307 (74%), Positives = 260/307 (84%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 D L LGWP GITP+A NRELW+G+ IAS VG IVWGLIFW SAFHRKKATDTELPRQF Sbjct: 59 DVLGLGWPKGITPQAHYNRELWLGATIASLVVGVIVWGLIFWASAFHRKKATDTELPRQF 118 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYNMPLEL LTV PFLIISVLFYFTVVVQE+M+H D +PEVV+DVTAFQWNWKFGYQ++ Sbjct: 119 GYNMPLELVLTVTPFLIISVLFYFTVVVQEKMLHLDKDPEVVVDVTAFQWNWKFGYQRVD 178 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DG+ YDGADP RK+AM S+PEGKD HG E VGP+RG+ DRTYLNFDK+ETLGTS Sbjct: 179 FKDGTLTYDGADPARKKAMVSKPEGKDAHGEELVGPVRGLNTSDRTYLNFDKVETLGTSD 238 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIPVLVLP GKRI+F L SADV+H FWVPEFLFKRDV+P +ANNS NVFQV +I +TGA Sbjct: 239 EIPVLVLPTGKRIQFQLASADVVHTFWVPEFLFKRDVIPNAEANNSVNVFQVDDISRTGA 298 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPF 328 FVG C E CGT+H+MMNFEVRVV PNDFKAY+ QR GK+NA+AL AI Q PLA++T PF Sbjct: 299 FVGHCAEFCGTYHSMMNFEVRVVPPNDFKAYLQQRIDGKSNAQALQAIGQAPLAVSTHPF 358 Query: 329 ESRRGEL 335 ++RRG+L Sbjct: 359 DTRRGQL 365 >tr|Q1B6S9|Q1B6S9_MYCSS Tax_Id=164756 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium sp.] Length = 352 Score = 486 bits (1252), Expect = e-135 Identities = 242/352 (68%), Positives = 275/352 (78%), Gaps = 11/352 (3%) Query: 1 MTPRGFRVVAXXXXXXXXXXXXXXXXXX----DALALGWPTGITPEAKLNRELWIGSVIA 56 MTPRG + VA +ALALGWP GITPEA LNRELWIGS+IA Sbjct: 1 MTPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIA 60 Query: 57 SFAVGAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVV 116 + VG IV+ LIFW SAFHRKKA+DTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVV Sbjct: 61 ALVVGGIVYFLIFWVSAFHRKKASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVV 120 Query: 117 QERMMHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPE---- 172 QE+M+ K+ NPEVV+DVTAFQWNWKFGY K+ FADG+ +YDG D ER A+ SRP Sbjct: 121 QEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNYDGVDEERSAAVASRPSEEGA 180 Query: 173 ---GKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSAD 229 G+ E + G I G PEDR+YL FD+IETLGTS EIPVLVLP+ KR+EF + SAD Sbjct: 181 GAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASAD 240 Query: 230 VIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVR 289 V H FWVPEFLFKRDV P P+ NNSDNVFQVSEI +TGAFVGRC E+CGT+HAMMNFEVR Sbjct: 241 VAHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVR 300 Query: 290 VVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQASK 341 VV PNDFKAY++QR AGKTNAEAL AINQPP A+TT+PF++RRGE+ PQAS+ Sbjct: 301 VVPPNDFKAYLNQRMAGKTNAEALIAINQPPTAVTTKPFDTRRGEMAPQASR 352 >tr|A3Q1R0|A3Q1R0_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium sp.] Length = 352 Score = 486 bits (1252), Expect = e-135 Identities = 242/352 (68%), Positives = 275/352 (78%), Gaps = 11/352 (3%) Query: 1 MTPRGFRVVAXXXXXXXXXXXXXXXXXX----DALALGWPTGITPEAKLNRELWIGSVIA 56 MTPRG + VA +ALALGWP GITPEA LNRELWIGS+IA Sbjct: 1 MTPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIA 60 Query: 57 SFAVGAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVV 116 + VG IV+ LIFW SAFHRKKA+DTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVV Sbjct: 61 ALVVGGIVYFLIFWVSAFHRKKASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVV 120 Query: 117 QERMMHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPE---- 172 QE+M+ K+ NPEVV+DVTAFQWNWKFGY K+ FADG+ +YDG D ER A+ SRP Sbjct: 121 QEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNYDGVDEERSAAVASRPSEEGA 180 Query: 173 ---GKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSAD 229 G+ E + G I G PEDR+YL FD+IETLGTS EIPVLVLP+ KR+EF + SAD Sbjct: 181 GAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASAD 240 Query: 230 VIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVR 289 V H FWVPEFLFKRDV P P+ NNSDNVFQVSEI +TGAFVGRC E+CGT+HAMMNFEVR Sbjct: 241 VAHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVR 300 Query: 290 VVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQASK 341 VV PNDFKAY++QR AGKTNAEAL AINQPP A+TT+PF++RRGE+ PQAS+ Sbjct: 301 VVPPNDFKAYLNQRMAGKTNAEALIAINQPPTAVTTKPFDTRRGEMAPQASR 352 >tr|A1UI96|A1UI96_MYCSK Tax_Id=189918 SubName: Full=Cytochrome c oxidase, subunit II; Flags: Precursor;[Mycobacterium sp.] Length = 352 Score = 486 bits (1252), Expect = e-135 Identities = 242/352 (68%), Positives = 275/352 (78%), Gaps = 11/352 (3%) Query: 1 MTPRGFRVVAXXXXXXXXXXXXXXXXXX----DALALGWPTGITPEAKLNRELWIGSVIA 56 MTPRG + VA +ALALGWP GITPEA LNRELWIGS+IA Sbjct: 1 MTPRGLKAVARKAALVVVLGATALVLSGCSWTEALALGWPKGITPEAHLNRELWIGSMIA 60 Query: 57 SFAVGAIVWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVV 116 + VG IV+ LIFW SAFHRKKA+DTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVV Sbjct: 61 ALVVGGIVYFLIFWVSAFHRKKASDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVV 120 Query: 117 QERMMHKDPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPE---- 172 QE+M+ K+ NPEVV+DVTAFQWNWKFGY K+ FADG+ +YDG D ER A+ SRP Sbjct: 121 QEQMVGKEDNPEVVVDVTAFQWNWKFGYNKVNFADGTMNYDGVDEERSAAVASRPSEEGA 180 Query: 173 ---GKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSAD 229 G+ E + G I G PEDR+YL FD+IETLGTS EIPVLVLP+ KR+EF + SAD Sbjct: 181 GAVGEPEAAHTEHGAIAGQNPEDRSYLAFDEIETLGTSDEIPVLVLPSEKRVEFRIASAD 240 Query: 230 VIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVR 289 V H FWVPEFLFKRDV P P+ NNSDNVFQVSEI +TGAFVGRC E+CGT+HAMMNFEVR Sbjct: 241 VAHAFWVPEFLFKRDVYPNPEQNNSDNVFQVSEITETGAFVGRCAELCGTYHAMMNFEVR 300 Query: 290 VVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPFESRRGELVPQASK 341 VV PNDFKAY++QR AGKTNAEAL AINQPP A+TT+PF++RRGE+ PQAS+ Sbjct: 301 VVPPNDFKAYLNQRMAGKTNAEALIAINQPPTAVTTKPFDTRRGEMAPQASR 352 >tr|B1MNZ2|B1MNZ2_MYCA9 Tax_Id=561007 SubName: Full=Probable cytochrome c oxidase subunit 2;[Mycobacterium abscessus] Length = 349 Score = 472 bits (1214), Expect = e-131 Identities = 225/310 (72%), Positives = 257/310 (82%), Gaps = 1/310 (0%) Query: 29 DALALGWPTGITPEAK-LNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQ 87 + L GWP GITPEA LW +V+AS VG IVWGL FWT AFHR K DTE PRQ Sbjct: 32 EVLRFGWPEGITPEAHDYMAPLWTWAVVASLVVGVIVWGLTFWTVAFHRHKPGDTEFPRQ 91 Query: 88 FGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKI 147 FGYN+PLEL LTV+PFLII+VLFYFTVVVQ ++MHKDPNPEVV+DVTAFQWNWKFGYQK+ Sbjct: 92 FGYNLPLELVLTVVPFLIIAVLFYFTVVVQNKVMHKDPNPEVVVDVTAFQWNWKFGYQKV 151 Query: 148 AFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTS 207 AF DGS +Y+GADPERK+AMTS+PEGKD HG E VGP+RG+ EDRTYLNFDKIET+GTS Sbjct: 152 AFKDGSLNYEGADPERKKAMTSKPEGKDAHGNELVGPVRGLNREDRTYLNFDKIETVGTS 211 Query: 208 SEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTG 267 SEIPVLV+P+GK IEF L SADVIH F V FLF RDV+PEPKANNSDNVFQVS+I + G Sbjct: 212 SEIPVLVVPSGKSIEFQLASADVIHSFRVVPFLFTRDVMPEPKANNSDNVFQVSKILKEG 271 Query: 268 AFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEP 327 AFVGRC EMCGT+H+MM FE+RVV PNDFK Y+ R GK+NAEALA+I Q P++ITT P Sbjct: 272 AFVGRCVEMCGTYHSMMAFELRVVSPNDFKFYLKARQDGKSNAEALASIGQSPVSITTRP 331 Query: 328 FESRRGELVP 337 F+ RRG+L P Sbjct: 332 FDGRRGDLAP 341 >tr|D5ZG97|D5ZG97_MYCTU Tax_Id=537210 SubName: Full=Transmembrane cytochrome C oxidase subunit II ctaC; Flags: Fragment;[Mycobacterium tuberculosis T17] Length = 342 Score = 440 bits (1132), Expect = e-121 Identities = 209/290 (72%), Positives = 237/290 (81%) Query: 4 RGFRVVAXXXXXXXXXXXXXXXXXXDALALGWPTGITPEAKLNRELWIGSVIASFAVGAI 63 RG R +A +AL +GWP GITPEA LNRELWIG+VIAS AVG I Sbjct: 41 RGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEGITPEAHLNRELWIGAVIASLAVGVI 100 Query: 64 VWGLIFWTSAFHRKKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHK 123 VWGLIFW++ FHRKK TDTELPRQFGYNMPLEL LTVIPFLIISVLFYFTVVVQE+M+ Sbjct: 101 VWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVLTVIPFLIISVLFYFTVVVQEKMLQI 160 Query: 124 DPNPEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVG 183 +PEVVID+T+FQWNWKFGYQ++ F DG+ YDGADPERK AM S+PEGKD++G E VG Sbjct: 161 AKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDGADPERKRAMVSKPEGKDKYGEELVG 220 Query: 184 PIRGMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKR 243 P+RG+ EDRTYLNFDK+ETLGTS+EIPVLVLP+GKRIEF + SADVIH FWVPEFLFKR Sbjct: 221 PVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSGKRIEFQMASADVIHAFWVPEFLFKR 280 Query: 244 DVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEP 293 DV+P P ANNS NVFQ+ EI +TGAFVG C EMCGT+H+MMNFEVRVV P Sbjct: 281 DVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMMNFEVRVVTP 330 >tr|C3JJA0|C3JJA0_RHOER Tax_Id=596309 SubName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Rhodococcus erythropolis SK121] Length = 352 Score = 395 bits (1015), Expect = e-108 Identities = 188/310 (60%), Positives = 227/310 (73%), Gaps = 6/310 (1%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 + L GWP+GITPEA RELW SV+A+ +G +VWGL+FW FHRKK E PRQ Sbjct: 31 EVLRFGWPSGITPEATRMRELWTWSVVAALVMGVLVWGLVFWAVIFHRKKKDSPEFPRQT 90 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 YN+PLEL T +PF+II+VLFYFTV+VQ ++ K NP+VV+DVTAFQWNWKFGY+ I Sbjct: 91 AYNVPLELGYTAVPFVIIAVLFYFTVIVQNHVLDKTDNPDVVVDVTAFQWNWKFGYRSIE 150 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DGS Y+G D E +EA + +EHG E GPI G + ED +YL++DKIET+G+S Sbjct: 151 FGDGSAKYNGIDVEAEEAAKTEGSTVNEHGEEVPGPIHGNSTEDLSYLHYDKIETVGSSQ 210 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIP+LVLP GKRI+F L S+DVIH FWVPEFLFKRDVLP PK N+SDN+FQ+SEI++ GA Sbjct: 211 EIPILVLPTGKRIQFELASSDVIHAFWVPEFLFKRDVLPNPKENHSDNIFQISEIEKEGA 270 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR------NAGKTNAEALAAINQPPLA 322 FVGRC EMCGTFHAMMNFEVR V P DF YI+ R G T AEAL AI Q P+A Sbjct: 271 FVGRCAEMCGTFHAMMNFEVRAVSPEDFAKYIELRKGDAEGKGGLTTAEALQAIGQSPVA 330 Query: 323 ITTEPFESRR 332 +T PF + R Sbjct: 331 TSTTPFNTDR 340 >tr|C1A125|C1A125_RHOE4 Tax_Id=234621 (ctaC)SubName: Full=Cytochrome c oxidase subunit II; EC=1.9.3.1;[Rhodococcus erythropolis] Length = 354 Score = 394 bits (1012), Expect = e-108 Identities = 187/310 (60%), Positives = 227/310 (73%), Gaps = 6/310 (1%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 + L GWP+GITPEA RELW SV+A+ +G +VWGL+FW FHRKK E PRQ Sbjct: 33 EVLRFGWPSGITPEATRMRELWTWSVVAALVMGVLVWGLVFWAVIFHRKKKDSPEFPRQT 92 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 YN+PLEL T +PF+II+VLFYFTV+VQ ++ K NP+VV+DVTAFQWNWKFGY+ I Sbjct: 93 AYNVPLELGYTAVPFVIIAVLFYFTVIVQNHVLDKTDNPDVVVDVTAFQWNWKFGYRSIE 152 Query: 149 FADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 F DGS Y+G D E +EA + ++HG E GPI G + ED +YL++DKIET+G+S Sbjct: 153 FGDGSAKYNGIDVEAEEAAKAEGSTVNDHGEEVPGPIHGNSTEDLSYLHYDKIETVGSSQ 212 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 EIP+LVLP GKRI+F L S+DVIH FWVPEFLFKRDVLP PK N+SDN+FQ+SEI++ GA Sbjct: 213 EIPILVLPTGKRIQFELASSDVIHAFWVPEFLFKRDVLPNPKENHSDNIFQISEIEKEGA 272 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR------NAGKTNAEALAAINQPPLA 322 FVGRC EMCGTFHAMMNFEVR V P DF YI+ R G T AEAL AI Q P+A Sbjct: 273 FVGRCAEMCGTFHAMMNFEVRAVSPEDFAKYIELRKGDAEGKGGLTTAEALQAIGQSPVA 332 Query: 323 ITTEPFESRR 332 +T PF + R Sbjct: 333 TSTTPFNTDR 342 >tr|D5PP91|D5PP91_COREQ Tax_Id=525370 (ctaC)SubName: Full=Cytochrome c oxidase, subunit II; EC=1.9.3.1;[Rhodococcus equi ATCC 33707] Length = 332 Score = 391 bits (1005), Expect = e-107 Identities = 188/310 (60%), Positives = 224/310 (72%), Gaps = 8/310 (2%) Query: 31 LALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQFGY 90 L GWP+G+TP+A+ RELW SVIA+ +G IVWGL FW FHRKK E PRQ Y Sbjct: 13 LRFGWPSGVTPQAERMRELWTWSVIAALVMGVIVWGLTFWVVVFHRKKKDSPEFPRQTAY 72 Query: 91 NMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIAFA 150 N+PLEL T +PF+II+VLFYFTVVVQ + K NP VV+DVTA+QWNWKFGY+ + Sbjct: 73 NVPLELFYTAVPFVIIAVLFYFTVVVQNYVTEKKDNPNVVVDVTAYQWNWKFGYRSVDLG 132 Query: 151 DGSFDYDGADPERKEAM--TSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGTSS 208 DG+ YDG D EA S+PEG DEHG EK+G I G P+D +YL +DKIET+GTS+ Sbjct: 133 DGAAKYDGIDQAATEAALAASKPEGVDEHGKEKIGAIHGKNPQDLSYLAYDKIETVGTSN 192 Query: 209 EIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQTGA 268 E+P+LVLP GKRIEFVL S+DVIH FWVPEFLFKRDV P PK N+SDNVFQ+SEI++ GA Sbjct: 193 EVPILVLPTGKRIEFVLASSDVIHSFWVPEFLFKRDVNPNPKENHSDNVFQISEIEKEGA 252 Query: 269 FVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNA------GKTNAEALAAINQPPLA 322 FVGRC EMCGTFHAMMNFEVR V P F+ YI R + G EALA+I + P A Sbjct: 253 FVGRCAEMCGTFHAMMNFEVRAVTPEKFEQYIQARKSVEEGGKGMNTGEALASIGESPTA 312 Query: 323 ITTEPFESRR 332 +T PF + R Sbjct: 313 TSTSPFYTDR 322 >sp|Q5YZ37|COX2_NOCFA Tax_Id=37329 (ctaC)RecName: Full=Probable cytochrome c oxidase subunit 2; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide II; AltName: Full=Cytochrome aa3 subunit 2;[Nocardia farcinica] Length = 375 Score = 387 bits (995), Expect = e-106 Identities = 183/308 (59%), Positives = 231/308 (75%), Gaps = 6/308 (1%) Query: 31 LALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQFGY 90 L GWP+G+TP+A RELW S+IA+ A+G +VWGL FWT FHRKK E PRQ GY Sbjct: 57 LRFGWPSGVTPQATRMRELWTWSIIAALAMGVLVWGLTFWTVVFHRKKKDSPEFPRQTGY 116 Query: 91 NMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIAFA 150 N+PLELT T IPF+II+VLFYFTVVVQ + K +P+V +DVTAFQWNWKFGY+++ F Sbjct: 117 NVPLELTYTAIPFVIIAVLFYFTVVVQNYVHEKVADPDVTVDVTAFQWNWKFGYREVDFK 176 Query: 151 DGSFDYDGADPERKEAMTSRPEGKDE-----HGIEKVGPIRGMTPED-RTYLNFDKIETL 204 DG + ++G D R+EA ++ + +E HG + GP+ G D +YL++D +ET+ Sbjct: 177 DGGYQFNGIDTAREEAAQAQLKEYEERVDTEHGHPQPGPVHGKPENDILSYLHYDTVETV 236 Query: 205 GTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQ 264 GTS+EIPVLVLP GK IEF L +ADVIH FWVPEFLFKRDV+P PK N+SDNVFQ++EI+ Sbjct: 237 GTSTEIPVLVLPTGKVIEFQLAAADVIHAFWVPEFLFKRDVMPNPKENHSDNVFQITEIE 296 Query: 265 QTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAIT 324 + GAFVGRC EMCGT+H+MMNFEVR V P F Y+D+R AGKTNAEALAAI + P+A + Sbjct: 297 KEGAFVGRCAEMCGTYHSMMNFEVRAVSPEKFTRYLDERRAGKTNAEALAAIGESPVATS 356 Query: 325 TEPFESRR 332 T PF + R Sbjct: 357 TRPFNTDR 364 >tr|Q0SHM2|Q0SHM2_RHOSR Tax_Id=101510 SubName: Full=Probable cytochrome c oxidase subunit II; EC=1.9.3.1;[Rhodococcus sp.] Length = 355 Score = 384 bits (985), Expect = e-104 Identities = 184/313 (58%), Positives = 225/313 (71%), Gaps = 8/313 (2%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 + L GWP+G+TP+A RELW SVIA+ +G +VWGL FW FHRKK E PRQ Sbjct: 33 EVLRFGWPSGVTPQAHRMRELWTWSVIAALVMGVLVWGLTFWAVIFHRKKKDSPEFPRQT 92 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 YN+PLEL T +PF+II+VLFYFTV+VQ ++ K+ NP VV+DVTA+QWNWKFGY+ I Sbjct: 93 AYNVPLELAYTAVPFVIIAVLFYFTVIVQNHVLEKEDNPNVVVDVTAYQWNWKFGYRSID 152 Query: 149 FADGSFDYDGADPERKEAMTSRP--EGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGT 206 +G YDG D E + A+ S P E K E + GPI G TP+D +YL++DKIET+G+ Sbjct: 153 LGEGGGKYDGVDQEAQAAVESAPASEAKAEGEHAQPGPIHGKTPQDLSYLHYDKIETIGS 212 Query: 207 SSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQT 266 S+EIP+LVLP GKRI+F L SADVIH FWVPEFLFKRDV P PK N+SDNVFQ+SEI++ Sbjct: 213 SNEIPILVLPTGKRIQFELASADVIHAFWVPEFLFKRDVNPNPKENHSDNVFQISEIEKE 272 Query: 267 GAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGK------TNAEALAAINQPP 320 GAFVGRC EMCGTFHAMMNFEVR V P+ F YI+ R T AEAL AI + P Sbjct: 273 GAFVGRCAEMCGTFHAMMNFEVRAVSPDKFAQYIELRKPASEGGRDLTTAEALQAIGESP 332 Query: 321 LAITTEPFESRRG 333 +A +T PF + RG Sbjct: 333 VATSTSPFTTDRG 345 >tr|C1AUA4|C1AUA4_RHOOB Tax_Id=632772 (ctaC)SubName: Full=Cytochrome c oxidase subunit II; EC=1.9.3.1;[Rhodococcus opacus] Length = 367 Score = 383 bits (984), Expect = e-104 Identities = 185/315 (58%), Positives = 226/315 (71%), Gaps = 12/315 (3%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 + L GWP+G+TP+A RELW SVIA+ +G +VWGL FW FHRKK E PRQ Sbjct: 45 EVLRFGWPSGVTPQAHRMRELWTWSVIAALVMGVLVWGLTFWAVIFHRKKKDSPEFPRQT 104 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 YN+PLEL T +PF+II+VLFYFTVVVQ ++ K+ NP VV+DVTA+QWNWKFGY+ I Sbjct: 105 AYNVPLELAYTAVPFVIIAVLFYFTVVVQNHVLEKEDNPNVVVDVTAYQWNWKFGYRSID 164 Query: 149 FADGSFDYDGADPERKEAMTSRP----EGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETL 204 +G YDG D E + A+ S P E + EH + GPI G TP+D +YL++DKIET+ Sbjct: 165 LGEGGGKYDGVDQEAQAAVESAPASEAEAEGEHA--QPGPIHGKTPQDLSYLHYDKIETI 222 Query: 205 GTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQ 264 G+S+EIP+LVLP GKRI+F L SADVIH FWVPEFLFKRDV P PK N+SDNVFQ+SEI+ Sbjct: 223 GSSNEIPILVLPTGKRIQFELASADVIHAFWVPEFLFKRDVNPNPKENHSDNVFQISEIE 282 Query: 265 QTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGK------TNAEALAAINQ 318 + GAFVGRC EMCGTFHAMMNFEVR V P+ F YI+ R T AEAL AI + Sbjct: 283 KEGAFVGRCAEMCGTFHAMMNFEVRAVSPDKFAQYIELRKPASEGGRDLTTAEALQAIGE 342 Query: 319 PPLAITTEPFESRRG 333 P+A +T PF + RG Sbjct: 343 SPVATSTSPFTTDRG 357 >tr|D0LAX5|D0LAX5_GORB4 Tax_Id=526226 SubName: Full=Cytochrome c oxidase subunit II;[Gordonia bronchialis] Length = 398 Score = 360 bits (924), Expect = 1e-97 Identities = 184/311 (59%), Positives = 222/311 (71%), Gaps = 9/311 (2%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTE---LP 85 DA+ GWP GITPEAK +LW SVIA+ +G +VW LIFWT +FHR A D + P Sbjct: 64 DAMRFGWPEGITPEAKQMGDLWTWSVIAALIMGILVWALIFWTISFHR--ANDEKKGVFP 121 Query: 86 RQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQ 145 RQ YN+PLELT T IPF+II+VLFYFTV+VQ + K+ + +VV+DVTAFQWNWKFGY+ Sbjct: 122 RQTAYNVPLELTYTAIPFIIIAVLFYFTVIVQNDVESKNNDSKVVVDVTAFQWNWKFGYR 181 Query: 146 KIAFADGSFDYDGADPERKEA--MTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIET 203 + F DG+ Y+GA P E E + HG E P G + RTYL FDKIET Sbjct: 182 SVIFDDGTPRYEGAQPGVGEGNPFAGPQEREMHHGEELPFPAGGRDDDIRTYLRFDKIET 241 Query: 204 LGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEI 263 +G+SSEIP+LVLP GKRIEF L +ADVIH FWVPEFLFKRDVLP P+ N++DNVFQ+S I Sbjct: 242 IGSSSEIPILVLPTGKRIEFNLAAADVIHSFWVPEFLFKRDVLPFPEQNHTDNVFQISSI 301 Query: 264 QQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYID--QRNAGKTNAEALAAINQPPL 321 + GAFVGRC EMCGT+H+MMNFEVR V P F AYI RN TNA+AL AI Q P Sbjct: 302 DREGAFVGRCAEMCGTYHSMMNFEVRAVSPQAFDAYIKFRDRNPQATNAQALEAICQEPK 361 Query: 322 AITTEPFESRR 332 ++TT PF++RR Sbjct: 362 SVTTVPFDTRR 372 >tr|D5UY53|D5UY53_TSUPA Tax_Id=521096 SubName: Full=Cytochrome c oxidase subunit II;[Tsukamurella paurometabola DSM 20162] Length = 366 Score = 323 bits (827), Expect = 3e-86 Identities = 163/318 (51%), Positives = 210/318 (66%), Gaps = 15/318 (4%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHRKKATDTELPRQF 88 + + GWP G+TPEA+ LW SV+A+ A+G +VW L FWT FHRKKA + PRQ Sbjct: 38 EVMRFGWPEGVTPEAREMTTLWSWSVVAALAMGVLVWALTFWTITFHRKKADSPDFPRQT 97 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 YN+PLEL T +PFLII+VLFYFTV+VQ ++ + NP V +DVTAFQWNW+F Y++I Sbjct: 98 AYNVPLELLYTAVPFLIIAVLFYFTVIVQTKVEKLEDNPAVTVDVTAFQWNWRFAYREIT 157 Query: 149 F--ADGSFDYD-------GADPERK----EAMTSRPE-GKDEHGIEKVGPIRGMTPEDRT 194 DG G P+ K EA + E G+ EH E+ GP G E R Sbjct: 158 ENGKDGGTPIKLERPNPYGQQPDLKKLNEEAAKEKAETGEIEHQPER-GPNHGRFQEIRD 216 Query: 195 YLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNS 254 YL F +E G+S+EIPVLVLP G RIEFVL SADV+H F+VP+F FKRDV+P PK N+S Sbjct: 217 YLKFSTVEVQGSSAEIPVLVLPTGARIEFVLASADVVHSFYVPQFAFKRDVMPNPKENHS 276 Query: 255 DNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQRNAGKTNAEALA 314 N FQ++EI+++G FVGRC EMCG +H+MMNFE+R V P F YI R GK NA AL Sbjct: 277 QNRFQITEIERSGDFVGRCAEMCGDYHSMMNFEIRAVSPEKFTQYIKARQDGKDNATALE 336 Query: 315 AINQPPLAITTEPFESRR 332 +I + ++ +T PF++RR Sbjct: 337 SIGESGVSTSTAPFDTRR 354 >tr|A4QFR0|A4QFR0_CORGB Tax_Id=340322 RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium glutamicum] Length = 359 Score = 313 bits (802), Expect = 2e-83 Identities = 164/312 (52%), Positives = 203/312 (65%), Gaps = 13/312 (4%) Query: 29 DALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGL----IFWTSAFHRKKATDTEL 84 D L +GWP GITPEA W +A++ +G I+WGL IF A +K + E Sbjct: 40 DFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFLTAIFAWGAKRAEKRGEGEF 99 Query: 85 PRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGY 144 P+Q YN+PLEL LT++P +I+ VLF+FTV Q+++ D NPEV +DVTA+QWNWKFGY Sbjct: 100 PKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGY 159 Query: 145 QKI--AFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIE 202 +I + A G DY G DPER+ T+ KD G PI G + D +YL F++IE Sbjct: 160 SEIDGSLAPGGQDYQGTDPERQA--TAEASKKDPSGDN---PIHGNSKSDVSYLEFNRIE 214 Query: 203 TLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSE 262 TLGT+ EIPV+VLPA IEF L SADV H FWVPEFLFKRD P+AN S VFQ+ E Sbjct: 215 TLGTTDEIPVMVLPANTPIEFNLASADVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEE 274 Query: 263 IQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR--NAGKTNAEALAAINQPP 320 I + GAFVGRC EMCGT+HAMMNFE+RVV+ + F YI R N TNA+AL I Q P Sbjct: 275 ITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPDATNAQALEHIGQAP 334 Query: 321 LAITTEPFESRR 332 A +T PF S R Sbjct: 335 YATSTSPFVSDR 346 >tr|C6RAZ9|C6RAZ9_9CORY Tax_Id=553206 SubName: Full=Putative cytochrome C oxidase, subunit II;[Corynebacterium tuberculostearicum SK141] Length = 357 Score = 313 bits (802), Expect = 2e-83 Identities = 162/308 (52%), Positives = 203/308 (65%), Gaps = 10/308 (3%) Query: 31 LALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGL----IFWTSAFHRKKATDTELPR 86 L GWP GITPEA+ WI +A++ VG I+WGL IF SA KK E PR Sbjct: 41 LGFGWPKGITPEAEAMYNFWIWVWVAAWIVGFIMWGLFLTAIFRWSAKKAKKDGKGEFPR 100 Query: 87 QFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQK 146 Q YN+PLE+ LT++P LII LF+FTV Q+++ D +P+VV+DVTAFQWNWKFGY + Sbjct: 101 QIQYNVPLEMVLTIVPILIIMGLFFFTVQTQQKVTALDKDPKVVVDVTAFQWNWKFGYAE 160 Query: 147 IAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGT 206 +G +YDGAD ER+ + D G++ PI G + D +YLN++KIET+GT Sbjct: 161 -NHVNGE-NYDGADKERQAE--AEKTAHDPEGVDNPNPIHGKSMGDLSYLNYNKIETVGT 216 Query: 207 SSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQT 266 + E+PVLVLP+ IEF L S DV H FWVPEFLFKRDV P+AN + FQV +I++ Sbjct: 217 TEEVPVLVLPSDTAIEFRLASGDVSHAFWVPEFLFKRDVYAHPEANAQERSFQVEKIEKQ 276 Query: 267 GAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR--NAGKTNAEALAAINQPPLAIT 324 GAFVGRC EMCGT+H+MMNFE+RVV P DF Y+ R N TNAEAL I Q P A+T Sbjct: 277 GAFVGRCAEMCGTYHSMMNFEIRVVSPEDFNTYLKFREDNPDATNAEALEEIGQDPYAVT 336 Query: 325 TEPFESRR 332 T PF R Sbjct: 337 THPFSGER 344 >tr|C2BNF6|C2BNF6_9CORY Tax_Id=525264 (ctaC)SubName: Full=Cytochrome C oxidase; EC=1.9.3.1;[Corynebacterium pseudogenitalium ATCC 33035] Length = 357 Score = 313 bits (801), Expect = 3e-83 Identities = 162/308 (52%), Positives = 203/308 (65%), Gaps = 10/308 (3%) Query: 31 LALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGL----IFWTSAFHRKKATDTELPR 86 L GWP GITPEA+ WI +A++ VG I+WGL IF SA KK E PR Sbjct: 41 LGFGWPKGITPEAEAMYNFWIWVWVAAWIVGFIMWGLFLTAIFRWSAKKAKKDGKGEFPR 100 Query: 87 QFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQK 146 Q YN+PLE+ LT++P LII LF+FTV Q+++ D +P+VV+DVTAFQWNWKFGY + Sbjct: 101 QIQYNVPLEMVLTIVPILIIMGLFFFTVQTQQKVTALDKDPKVVVDVTAFQWNWKFGYAE 160 Query: 147 IAFADGSFDYDGADPERKEAMTSRPEGKDEHGIEKVGPIRGMTPEDRTYLNFDKIETLGT 206 +G +YDGAD ER+ + D G++ PI G + D +YLN++KIET+GT Sbjct: 161 -NHVNGE-NYDGADKERQAE--AEKTAHDPEGVDNPNPIHGKSMGDLSYLNYNKIETVGT 216 Query: 207 SSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQQT 266 + E+PVLVLP+ IEF L S DV H FWVPEFLFKRDV P+AN + FQV +I++ Sbjct: 217 TEEVPVLVLPSDTAIEFRLASGDVSHAFWVPEFLFKRDVYAHPEANAQERSFQVEKIEKQ 276 Query: 267 GAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYIDQR--NAGKTNAEALAAINQPPLAIT 324 GAFVGRC EMCGT+H+MMNFE+RVV P DF Y+ R N TNAEAL I Q P A+T Sbjct: 277 GAFVGRCAEMCGTYHSMMNFEIRVVSPEDFNTYLKFREDNPEATNAEALEEIGQDPYAVT 336 Query: 325 TEPFESRR 332 T PF R Sbjct: 337 THPFSGER 344 >tr|C8RRE5|C8RRE5_CORJE Tax_Id=525262 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1;[Corynebacterium jeikeium ATCC 43734] Length = 326 Score = 312 bits (800), Expect = 4e-83 Identities = 159/310 (51%), Positives = 208/310 (67%), Gaps = 10/310 (3%) Query: 33 LGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFW----TSAFHRKKATDTELPRQF 88 +GWP GITPE+K LW+ + ++ +G I+W L+F +SA +K + E PRQ Sbjct: 1 MGWPKGITPESKEMGNLWVWVWVVAWIIGLIMWVLLFVNMGRSSAKKAEKRGEDEFPRQT 60 Query: 89 GYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQKIA 148 GYN+PLEL LT +P LI+ LF+F V Q+R D +P+VV+DVT +QWNWKFGY ++A Sbjct: 61 GYNVPLELVLTTLPVLIVCGLFFFNVQAQDRATALDKDPKVVVDVTGYQWNWKFGYHEVA 120 Query: 149 FA-DGSFDYDGADPERKEAM--TSRPEGK-DEHGIEKVGPIRGMTPEDRTYLNFDKIETL 204 +G +Y G D E + + +PE K D+HG + GPI G + +D +YLN++KIET+ Sbjct: 121 AELNGGQEYKGVDKEAQARAEESKKPEEKLDKHGHQVPGPIHGKSKDDLSYLNYNKIETV 180 Query: 205 GTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSEIQ 264 GT+ EIPVLV+P+G IEF L SADV+H FW+PEFLFKRDV P P N S+ FQV I Sbjct: 181 GTTQEIPVLVVPSGTPIEFNLASADVVHSFWIPEFLFKRDVFPHPSENRSERRFQVESID 240 Query: 265 QTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYID--QRNAGKTNAEALAAINQPPLA 322 + GAFVGRC EMCGT+HAMMNFE+RVV P F+ YI Q N N+EAL AI + A Sbjct: 241 EEGAFVGRCAEMCGTYHAMMNFELRVVSPEKFEQYIKFRQDNPEAPNSEALKAIGEEGYA 300 Query: 323 ITTEPFESRR 332 +T PFES R Sbjct: 301 TSTHPFESDR 310 >tr|Q4JWC9|Q4JWC9_CORJK Tax_Id=306537 (ctaC)RecName: Full=Cytochrome c oxidase subunit 2; EC=1.9.3.1; Flags: Precursor;[Corynebacterium jeikeium] Length = 369 Score = 311 bits (798), Expect = 6e-83 Identities = 159/312 (50%), Positives = 209/312 (66%), Gaps = 10/312 (3%) Query: 31 LALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFW----TSAFHRKKATDTELPR 86 L +GWP GITPE+K LW+ + ++ +G I+W L+F +SA +K + E PR Sbjct: 42 LRMGWPKGITPESKEMGNLWVWVWVVAWIIGLIMWVLLFVNMGRSSAKKAEKRGEDEFPR 101 Query: 87 QFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPNPEVVIDVTAFQWNWKFGYQK 146 Q GYN+PLEL LT +P LI+ LF+F V Q+R D +P+VV+DVT +QWNWKFGY + Sbjct: 102 QTGYNVPLELVLTTLPVLIVCGLFFFNVQAQDRATALDKDPKVVVDVTGYQWNWKFGYHE 161 Query: 147 IAFA-DGSFDYDGADPERKEAM--TSRPEGK-DEHGIEKVGPIRGMTPEDRTYLNFDKIE 202 +A +G +Y G D E + + +PE K D+HG + GPI G + +D +YLN++KIE Sbjct: 162 VAAELNGGQEYKGVDKEAQARAEESKKPEEKLDKHGHQVPGPIHGKSKDDLSYLNYNKIE 221 Query: 203 TLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVPEFLFKRDVLPEPKANNSDNVFQVSE 262 T+GT+ EIPVLV+P+G IEF L SADV+H FW+PEFLFKRDV P P N S+ FQV Sbjct: 222 TVGTTQEIPVLVVPSGTPIEFNLASADVVHSFWIPEFLFKRDVFPHPSENRSERRFQVES 281 Query: 263 IQQTGAFVGRCTEMCGTFHAMMNFEVRVVEPNDFKAYID--QRNAGKTNAEALAAINQPP 320 I + GAFVGRC EMCGT+HAMM+FE+RVV P F+ YI Q N N+EAL AI + Sbjct: 282 IDEEGAFVGRCAEMCGTYHAMMSFELRVVSPEKFEQYIKFRQDNPEAPNSEALKAIGEEG 341 Query: 321 LAITTEPFESRR 332 A +T PFES R Sbjct: 342 YATSTHPFESDR 353 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.321 0.137 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,741,813,225 Number of extensions: 114783835 Number of successful extensions: 295288 Number of sequences better than 10.0: 15555 Number of HSP's gapped: 281236 Number of HSP's successfully gapped: 16007 Length of query: 341 Length of database: 4,236,830,644 Length adjustment: 139 Effective length of query: 202 Effective length of database: 2,498,237,548 Effective search space: 504643984696 Effective search space used: 504643984696 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 81 (35.8 bits)