BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_4437 (583 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R0M4|A0R0M4_MYCS2 Tax_Id=246196 (ctaD)SubName: Full=Cytochr... 1111 0.0 tr|Q1BAX3|Q1BAX3_MYCSS Tax_Id=164756 SubName: Full=Cytochrome-c ... 968 0.0 tr|A3PXJ4|A3PXJ4_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome-c ... 968 0.0 tr|A1UE41|A1UE41_MYCSK Tax_Id=189918 SubName: Full=Cytochrome-c ... 968 0.0 tr|A4TDW8|A4TDW8_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c ... 964 0.0 tr|A1TBD9|A1TBD9_MYCVP Tax_Id=350058 SubName: Full=Cytochrome-c ... 964 0.0 tr|A1T6U7|A1T6U7_MYCVP Tax_Id=350058 SubName: Full=Cytochrome-c ... 962 0.0 tr|A4T208|A4T208_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c ... 962 0.0 tr|A1TGS5|A1TGS5_MYCVP Tax_Id=350058 SubName: Full=Cytochrome-c ... 961 0.0 tr|A4TGB0|A4TGB0_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c ... 961 0.0 tr|B2HHG9|B2HHG9_MYCMM Tax_Id=216594 (ctaD)SubName: Full=Cytochr... 961 0.0 tr|A4TGE5|A4TGE5_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c ... 960 0.0 tr|A1UPU1|A1UPU1_MYCSK Tax_Id=189918 SubName: Full=Cytochrome-c ... 960 0.0 sp|P63852|COX1_MYCTU Tax_Id=1773 (ctaD)RecName: Full=Probable cy... 959 0.0 sp|P63853|COX1_MYCBO Tax_Id=1765 (ctaD)RecName: Full=Probable cy... 959 0.0 tr|C6DVL7|C6DVL7_MYCTK Tax_Id=478434 SubName: Full=Cytochrome C ... 959 0.0 tr|C1AGG1|C1AGG1_MYCBT Tax_Id=561275 (ctaD)SubName: Full=Putativ... 959 0.0 tr|A5WRU7|A5WRU7_MYCTF Tax_Id=336982 SubName: Full=Cytochrome C ... 959 0.0 tr|A5U757|A5U757_MYCTA Tax_Id=419947 (ctaD)SubName: Full=Cytochr... 959 0.0 tr|A1KN40|A1KN40_MYCBP Tax_Id=410289 (ctaD)SubName: Full=Probabl... 959 0.0 tr|D6G1C9|D6G1C9_MYCTU Tax_Id=478435 SubName: Full=Cytochrome C ... 959 0.0 tr|D6FKT8|D6FKT8_MYCTU Tax_Id=611303 SubName: Full=Cytochrome C ... 959 0.0 tr|D6F924|D6F924_MYCTU Tax_Id=611302 SubName: Full=Cytochrome c ... 959 0.0 tr|D5ZKP4|D5ZKP4_MYCTU Tax_Id=537210 SubName: Full=Cytochrome C ... 959 0.0 tr|D5YVY5|D5YVY5_MYCTU Tax_Id=515616 SubName: Full=Cytochrome C ... 959 0.0 tr|D5YJ04|D5YJ04_MYCTU Tax_Id=520140 SubName: Full=Cytochrome C ... 959 0.0 tr|D5Y7W0|D5Y7W0_MYCTU Tax_Id=520141 SubName: Full=Cytochrome C ... 959 0.0 tr|D5XY41|D5XY41_MYCTU Tax_Id=515617 SubName: Full=Cytochrome C ... 959 0.0 tr|A4KKU6|A4KKU6_MYCTU Tax_Id=395095 SubName: Full=Cytochrome C ... 959 0.0 tr|A2VNK9|A2VNK9_MYCTU Tax_Id=348776 SubName: Full=Cytochrome C ... 959 0.0 tr|D6FQ20|D6FQ20_MYCTU Tax_Id=611304 SubName: Full=Cytochrome C ... 956 0.0 tr|A0PPT0|A0PPT0_MYCUA Tax_Id=362242 (ctaD)SubName: Full=Cytochr... 955 0.0 tr|D5PIQ8|D5PIQ8_9MYCO Tax_Id=525368 (ctaD2)SubName: Full=Cytoch... 952 0.0 tr|Q1B6D9|Q1B6D9_MYCSS Tax_Id=164756 SubName: Full=Cytochrome-c ... 951 0.0 tr|A1UIN7|A1UIN7_MYCSK Tax_Id=189918 SubName: Full=Cytochrome-c ... 951 0.0 tr|A3Q250|A3Q250_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome-c ... 951 0.0 sp|Q9CBQ5|COX1_MYCLE Tax_Id=1769 (ctaD)RecName: Full=Probable cy... 948 0.0 tr|B8ZS43|B8ZS43_MYCLB Tax_Id=561304 SubName: Full=Cytochrome C ... 948 0.0 sp|Q73VC3|COX1_MYCPA Tax_Id=1770 (ctaD)RecName: Full=Probable cy... 946 0.0 tr|A4T6B2|A4T6B2_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c ... 946 0.0 tr|B1MDZ6|B1MDZ6_MYCA9 Tax_Id=561007 SubName: Full=Probable cyto... 939 0.0 tr|B2HHM4|B2HHM4_MYCMM Tax_Id=216594 (ctaD_1)SubName: Full=Cytoc... 937 0.0 tr|D5P9M7|D5P9M7_9MYCO Tax_Id=525368 (ctaD)SubName: Full=Cytochr... 936 0.0 tr|A0PNG8|A0PNG8_MYCUA Tax_Id=362242 (ctaD_1)SubName: Full=Cytoc... 920 0.0 tr|B1MBS7|B1MBS7_MYCA9 Tax_Id=561007 SubName: Full=Probable cyto... 912 0.0 >tr|A0R0M4|A0R0M4_MYCS2 Tax_Id=246196 (ctaD)SubName: Full=Cytochrome c oxidase, subunit I; EC=1.9.3.1;[Mycobacterium smegmatis] Length = 583 Score = 1111 bits (2873), Expect = 0.0 Identities = 540/583 (92%), Positives = 540/583 (92%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL Sbjct: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR Sbjct: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNALSFWLFLFGASIA WTAYTPLSNAMHSPGAGGDLW Sbjct: 121 LNALSFWLFLFGASIALGGFLAPGGPADFGWTAYTPLSNAMHSPGAGGDLWIFGLIVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL Sbjct: 181 GTILGAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT Sbjct: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML Sbjct: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS ILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK Sbjct: 361 FSVGFLVTFLLGGLTGVILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG Sbjct: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVTLPQPQARSHPVE 583 PAFELHYPHMIERLRAESHPGRTQGGPGAVTLPQPQARSHPVE Sbjct: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVTLPQPQARSHPVE 583 >tr|Q1BAX3|Q1BAX3_MYCSS Tax_Id=164756 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium sp.] Length = 576 Score = 968 bits (2503), Expect = 0.0 Identities = 449/562 (79%), Positives = 494/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M AP GEL ARRPFP+RLGP+ L YK++TTTDHKLIG+MY +ACF FF +GGLMAL Sbjct: 1 MVAEAPPIGELEARRPFPERLGPKGNLFYKVITTTDHKLIGIMYCIACFAFFLVGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FMRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAY+PL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFLFGALIALAGFITPGGAADFGWTAYSPLTDAIHSPGAGGDLWIMGLAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNM+TTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGGVNMVTTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 I+I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 IAIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFLLTFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HW+G EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDEKLGKLHFWLTFIGFHTTFLVQHWVGDEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WN+F+SWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGISTLPFLWNIFRSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ER+RAE+H GR Sbjct: 541 PAFELHYPHMVERMRAEAHVGR 562 >tr|A3PXJ4|A3PXJ4_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium sp.] Length = 576 Score = 968 bits (2503), Expect = 0.0 Identities = 449/562 (79%), Positives = 494/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M AP GEL ARRPFP+RLGP+ L YK++TTTDHKLIG+MY +ACF FF +GGLMAL Sbjct: 1 MVAEAPPIGELEARRPFPERLGPKGNLFYKVITTTDHKLIGIMYCIACFAFFLVGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FMRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAY+PL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFLFGALIALAGFITPGGAADFGWTAYSPLTDAIHSPGAGGDLWIMGLAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNM+TTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGGVNMVTTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 I+I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 IAIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFLLTFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HW+G EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDEKLGKLHFWLTFIGFHTTFLVQHWVGDEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WN+F+SWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGISTLPFLWNIFRSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ER+RAE+H GR Sbjct: 541 PAFELHYPHMVERMRAEAHVGR 562 >tr|A1UE41|A1UE41_MYCSK Tax_Id=189918 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium sp.] Length = 576 Score = 968 bits (2503), Expect = 0.0 Identities = 449/562 (79%), Positives = 494/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M AP GEL ARRPFP+RLGP+ L YK++TTTDHKLIG+MY +ACF FF +GGLMAL Sbjct: 1 MVAEAPPIGELEARRPFPERLGPKGNLFYKVITTTDHKLIGIMYCIACFAFFLVGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FMRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAY+PL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFLFGALIALAGFITPGGAADFGWTAYSPLTDAIHSPGAGGDLWIMGLAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNM+TTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGGVNMVTTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 I+I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 IAIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFLLTFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HW+G EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDEKLGKLHFWLTFIGFHTTFLVQHWVGDEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WN+F+SWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGISTLPFLWNIFRSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ER+RAE+H GR Sbjct: 541 PAFELHYPHMVERMRAEAHVGR 562 >tr|A4TDW8|A4TDW8_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium gilvum] Length = 580 Score = 964 bits (2491), Expect = 0.0 Identities = 455/580 (78%), Positives = 498/580 (85%), Gaps = 1/580 (0%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M AP GEL ARRPFP+R+GP+ L+YKL+TTTDHKLIG+MY VACF FF IGGLMAL Sbjct: 1 MVAEAPPIGELEARRPFPERIGPKGNLIYKLITTTDHKLIGIMYCVACFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELA+PGLQFLSNEQ+NQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FMRTELALPGLQFLSNEQFNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAY+PL++A+HSPGAG DLW Sbjct: 121 LNAFSFWLFLFGALIATAGFITPGGAADFGWTAYSPLTDAIHSPGAGADLWIMGLAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFP+LT+ALFGLAADR+L Sbjct: 181 GTILGGVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPILTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LGIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFILTFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGLSTLPFLWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG-GPGAVTLPQPQARS 579 PAFELHYPHMI+R+R E+H GR G G VT + R+ Sbjct: 541 PAFELHYPHMIDRMRREAHVGRAHGPEDGDVTRNEENVRT 580 >tr|A1TBD9|A1TBD9_MYCVP Tax_Id=350058 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium vanbaalenii] Length = 581 Score = 964 bits (2491), Expect = 0.0 Identities = 453/565 (80%), Positives = 491/565 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M APS GEL ARRPFP R+GP+ L+Y+L+TTTDHKLIGMMY VACF FF IGGLMAL Sbjct: 1 MVADAPSVGELEARRPFPARMGPKGNLIYRLITTTDHKLIGMMYCVACFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FIRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAYTPLS+A++SPGAG DLW Sbjct: 121 LNAFSFWLFLFGALIATAGFITPGGAADFGWTAYTPLSSAINSPGAGADLWILGLIVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALF LAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LGIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPP+DF VTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFIVTFLLGGLSGVLLASPPIDFQVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGNEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG S LPF+WN+FKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASTLPFLWNIFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHM+ER+R E+H GR +G Sbjct: 541 PAFELHYPHMVERMRREAHVGRARG 565 >tr|A1T6U7|A1T6U7_MYCVP Tax_Id=350058 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium vanbaalenii] Length = 581 Score = 962 bits (2488), Expect = 0.0 Identities = 449/565 (79%), Positives = 489/565 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M AP GEL RRP+P+RLGP+ L+YKL+TTTDHKLIG+MY V CF FF IGGLMAL Sbjct: 1 MVAEAPPIGELEIRRPYPERLGPKGNLIYKLITTTDHKLIGIMYCVVCFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELA PGLQFLSNEQ+NQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FMRTELATPGLQFLSNEQFNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAY+PL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFLFGALIATAGFITPGGAADFGWTAYSPLTDAIHSPGAGGDLWIMGLAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFP+LT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLIAFPILTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LGIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSIGFIATFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGK+HFWLT IGFH TFLV HWLG EGMPRRYADYLPTDGFTTLN+VSTIG Sbjct: 421 MTGRLLDERLGKVHFWLTFIGFHATFLVQHWLGDEGMPRRYADYLPTDGFTTLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG S LPF+WNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASTLPFLWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHM+ER+R E+H GR G Sbjct: 541 PAFELHYPHMVERMRTEAHVGRAHG 565 >tr|A4T208|A4T208_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium gilvum] Length = 581 Score = 962 bits (2487), Expect = 0.0 Identities = 452/565 (80%), Positives = 491/565 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M AP GEL ARRPFP R+GP+ L+Y+L+TTTDHKLIGMMY VACF FF IGGLMAL Sbjct: 1 MVADAPPVGELEARRPFPARMGPKGNLIYRLITTTDHKLIGMMYCVACFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FIRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAYTPLS+A++SPGAG DLW Sbjct: 121 LNAFSFWLFLFGALIATAGFITPGGAADFGWTAYTPLSSAIYSPGAGADLWILGLIVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALF LAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LGIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDF VTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSIGFIVTFLLGGLSGVLLASPPLDFQVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLP+DGFTTLN++STIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGNEGMPRRYADYLPSDGFTTLNVISTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGLSTLPFLWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHMI+R+R E+H GR+ G Sbjct: 541 PAFELHYPHMIDRMRREAHVGRSHG 565 >tr|A1TGS5|A1TGS5_MYCVP Tax_Id=350058 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium vanbaalenii] Length = 584 Score = 961 bits (2485), Expect = 0.0 Identities = 447/557 (80%), Positives = 488/557 (87%) Query: 11 LLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMALLLRTELAVPG 70 L+ +RPFP RLGP+ L+YKL+TTTDHKLIG+MYVV CF+FF IGG+MAL +RTELAVPG Sbjct: 13 LVPKRPFPARLGPKGNLIYKLITTTDHKLIGIMYVVTCFVFFLIGGIMALFIRTELAVPG 72 Query: 71 LQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPRLNALSFWLFL 130 LQFLSNEQYNQLFTMHGT MLLFYATPIVFGFANLV+PLQIGAPDVAFPRLNA SFWLFL Sbjct: 73 LQFLSNEQYNQLFTMHGTAMLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFL 132 Query: 131 FGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXXXXXXXAVNMI 190 FGA IA WTAYTPLS+AM+SPGAGGDLW AVNMI Sbjct: 133 FGALIALSGFITPGGAADFGWTAYTPLSDAMYSPGAGGDLWIFGLGVGGLGTILGAVNMI 192 Query: 191 TTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNLGAHVFDPANG 250 TTVVCMRAPGM MFRMPIFTWNILVTS++VL+ FPLLT+ALFGLAADR+LGAHV+DPANG Sbjct: 193 TTVVCMRAPGMTMFRMPIFTWNILVTSILVLLIFPLLTAALFGLAADRHLGAHVYDPANG 252 Query: 251 GTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYATISIGALSIAV 310 G +LW+HLFW+FGHPEVY+IALPFFGI++E+ PVFSRKP+FGYTTL+YAT SIGALS+AV Sbjct: 253 GVLLWQHLFWYFGHPEVYVIALPFFGIISEVIPVFSRKPIFGYTTLIYATFSIGALSMAV 312 Query: 311 WAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPMLFSXXXXXXXX 370 WAHH++ATGAVL PFFSFMTF+IAVPTGIKF NW+GTMWKGQLTFETPMLFS Sbjct: 313 WAHHMFATGAVLYPFFSFMTFLIAVPTGIKFFNWLGTMWKGQLTFETPMLFSVGFIATFL 372 Query: 371 XXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDDRL 430 +LASPPLDFHV DSYFVVAHFHYVLFGTIVFATYAG+YFWFPKMTGRLLD+RL Sbjct: 373 LGGLSGVLLASPPLDFHVHDSYFVVAHFHYVLFGTIVFATYAGIYFWFPKMTGRLLDERL 432 Query: 431 GKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIGSFILGVSMLP 490 GKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGFTTLN++STIG+FILG SMLP Sbjct: 433 GKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFTTLNVISTIGAFILGASMLP 492 Query: 491 FVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHM 550 FVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHM Sbjct: 493 FVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHM 552 Query: 551 IERLRAESHPGRTQGGP 567 +ER+RAE+H GR GGP Sbjct: 553 VERMRAEAHAGRKHGGP 569 >tr|A4TGB0|A4TGB0_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium gilvum] Length = 581 Score = 961 bits (2484), Expect = 0.0 Identities = 452/565 (80%), Positives = 489/565 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M AP EL ARRPFP R+GP+ L+Y+L+TTTDHKLIGMMY VACF FF IGGLMAL Sbjct: 1 MVADAPPIAELEARRPFPARMGPKGNLIYRLITTTDHKLIGMMYCVACFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FIRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAYTPLS+A++SPGAG DLW Sbjct: 121 LNAFSFWLFLFGALIATAGFITPGGAADFGWTAYTPLSSAIYSPGAGADLWILGLIVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALF LAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LGIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPP+DF VTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSIGFIVTFLLGGLSGVLLASPPIDFQVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGNEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG S LPF+WN+FKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASTLPFLWNIFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHM+ER+RAE+H GR G Sbjct: 541 PAFELHYPHMVERMRAEAHVGRAHG 565 >tr|B2HHG9|B2HHG9_MYCMM Tax_Id=216594 (ctaD)SubName: Full=Cytochrome C oxidase polypeptide I CtaD;[Mycobacterium marinum] Length = 573 Score = 961 bits (2483), Expect = 0.0 Identities = 449/562 (79%), Positives = 492/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ L+YKL+TTTDHKLIG+MYVV CFIFF IGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGNLVYKLLTTTDHKLIGIMYVVTCFIFFLIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELATPGLQFLSNEQFNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA++ WTAYTPL++A+HSPG GGDLW Sbjct: 121 LNAFSFWLFLFGATLGMAGFITPGGAADFGWTAYTPLTDAIHSPGVGGDLWIMGIAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVYI+ALPFFG+V+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYILALPFFGVVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMTF+IAVPTGIKF NW+GTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGIKFFNWVGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVF+T+AG+YFWFPK Sbjct: 361 FSVGFAVTFLLGGLSGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFSTFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LNIVSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILGV+M+PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGVAMIPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ERLRAE+H GR Sbjct: 541 PAFELHYPHMVERLRAEAHVGR 562 >tr|A4TGE5|A4TGE5_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium gilvum] Length = 581 Score = 960 bits (2482), Expect = 0.0 Identities = 451/565 (79%), Positives = 489/565 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M APS GEL RRPFP R+GP+ L+Y+L+TTTDHKLIG+MY VACF FF IGGLMAL Sbjct: 1 MVADAPSVGELEVRRPFPARMGPKGNLIYRLITTTDHKLIGIMYCVACFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FIRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAYTPLS+A++SPGAG DLW Sbjct: 121 LNAFSFWLFLFGALIATAGFITPGGAADFGWTAYTPLSSAINSPGAGADLWILGLIVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALF LAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LGIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPP+DF VTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFIVTFLLGGLSGVLLASPPIDFQVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGNEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG S LPF+WN+FKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASTLPFLWNIFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHM+ER+R E+H GR G Sbjct: 541 PAFELHYPHMVERMRREAHVGRAHG 565 >tr|A1UPU1|A1UPU1_MYCSK Tax_Id=189918 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium sp.] Length = 581 Score = 960 bits (2482), Expect = 0.0 Identities = 451/565 (79%), Positives = 489/565 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 M APS GEL RRPFP R+GP+ L+Y+L+TTTDHKLIG+MY VACF FF IGGLMAL Sbjct: 1 MVADAPSVGELEVRRPFPARMGPKGNLIYRLITTTDHKLIGIMYCVACFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FIRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA IA WTAYTPLS+A++SPGAG DLW Sbjct: 121 LNAFSFWLFLFGALIATAGFITPGGAADFGWTAYTPLSSAINSPGAGADLWILGLIVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALF LAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLAFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+DPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVYDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALS+AVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LGIAALSVAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPP+DF VTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFIVTFLLGGLSGVLLASPPIDFQVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGNEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG S LPF+WN+FKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASTLPFLWNIFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHM+ER+R E+H GR G Sbjct: 541 PAFELHYPHMVERMRREAHVGRAHG 565 >sp|P63852|COX1_MYCTU Tax_Id=1773 (ctaD)RecName: Full=Probable cytochrome c oxidase subunit 1; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide I; AltName: Full=Cytochrome aa3 subunit 1;[Mycobacterium tuberculosis] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >sp|P63853|COX1_MYCBO Tax_Id=1765 (ctaD)RecName: Full=Probable cytochrome c oxidase subunit 1; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide I; AltName: Full=Cytochrome aa3 subunit 1;[Mycobacterium bovis] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|C6DVL7|C6DVL7_MYCTK Tax_Id=478434 SubName: Full=Cytochrome C oxidase polypeptide I ctaD;[Mycobacterium tuberculosis] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|C1AGG1|C1AGG1_MYCBT Tax_Id=561275 (ctaD)SubName: Full=Putative cytochrome c oxidase polypeptide I; EC=1.9.3.1;[Mycobacterium bovis] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|A5WRU7|A5WRU7_MYCTF Tax_Id=336982 SubName: Full=Cytochrome C oxidase subunit I ctaD;[Mycobacterium tuberculosis] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|A5U757|A5U757_MYCTA Tax_Id=419947 (ctaD)SubName: Full=Cytochrome c oxidase subunit I;[Mycobacterium tuberculosis] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|A1KN40|A1KN40_MYCBP Tax_Id=410289 (ctaD)SubName: Full=Probable cytochrome C oxidase polypeptide I ctaD; EC=1.9.3.1;[Mycobacterium bovis] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D6G1C9|D6G1C9_MYCTU Tax_Id=478435 SubName: Full=Cytochrome C oxidase polypeptide I ctaD;[Mycobacterium tuberculosis KZN 605] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D6FKT8|D6FKT8_MYCTU Tax_Id=611303 SubName: Full=Cytochrome C oxidase polypeptide I ctaD;[Mycobacterium tuberculosis CPHL_A] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D6F924|D6F924_MYCTU Tax_Id=611302 SubName: Full=Cytochrome c oxidase, subunit I;[Mycobacterium tuberculosis T46] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D5ZKP4|D5ZKP4_MYCTU Tax_Id=537210 SubName: Full=Cytochrome C oxidase polypeptide I ctaD;[Mycobacterium tuberculosis T17] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D5YVY5|D5YVY5_MYCTU Tax_Id=515616 SubName: Full=Cytochrome C oxidase subunit I ctaD;[Mycobacterium tuberculosis 02_1987] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D5YJ04|D5YJ04_MYCTU Tax_Id=520140 SubName: Full=Cytochrome C oxidase subunit I ctaD;[Mycobacterium tuberculosis EAS054] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D5Y7W0|D5Y7W0_MYCTU Tax_Id=520141 SubName: Full=Cytochrome C oxidase polypeptide I;[Mycobacterium tuberculosis T85] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D5XY41|D5XY41_MYCTU Tax_Id=515617 SubName: Full=Cytochrome C oxidase polypeptide I ctaD;[Mycobacterium tuberculosis T92] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|A4KKU6|A4KKU6_MYCTU Tax_Id=395095 SubName: Full=Cytochrome C oxidase polypeptide I ctaD (Cytochrome aa3 subunit 1);[Mycobacterium tuberculosis str. Haarlem] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|A2VNK9|A2VNK9_MYCTU Tax_Id=348776 SubName: Full=Cytochrome C oxidase polypeptide I ctaD (Cytochrome aa3 subunit 1);[Mycobacterium tuberculosis C] Length = 573 Score = 959 bits (2478), Expect = 0.0 Identities = 449/571 (78%), Positives = 493/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|D6FQ20|D6FQ20_MYCTU Tax_Id=611304 SubName: Full=Cytochrome C oxidase polypeptide I ctaD;[Mycobacterium tuberculosis K85] Length = 573 Score = 956 bits (2472), Expect = 0.0 Identities = 448/571 (78%), Positives = 492/571 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ +L+YKL+TTTDHK+IG+MY VAC FFFIGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLF+FGA+I WTAYTPL++A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNI+VTS+++L+AFPLLT+AL GLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALLGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFAT+AG+YFWFPK Sbjct: 361 FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQGGPGAVT 571 PAFELHYPHM+ERLRAE+H GR P VT Sbjct: 541 PAFELHYPHMVERLRAEAHVGRHHDEPAMVT 571 >tr|A0PPT0|A0PPT0_MYCUA Tax_Id=362242 (ctaD)SubName: Full=Cytochrome C oxidase polypeptide I CtaD;[Mycobacterium ulcerans] Length = 573 Score = 955 bits (2468), Expect = 0.0 Identities = 447/562 (79%), Positives = 490/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ L+YKL+TTTDHKLIG+MYVV CFIFF IGGL+AL Sbjct: 1 MTAEAPPLGELEAIRPYPARTGPKGNLVYKLLTTTDHKLIGIMYVVTCFIFFLIGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGTVMLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELATPGLQFLSNEQFNQLFTMHGTVMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA++ WTAYTPL++A+HSPG GGDLW Sbjct: 121 LNAFSFWLFLFGATLGMAGFITPGGAADFGWTAYTPLTDAIHSPGVGGDLWIMGIAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRM IFTWNILVTS++VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMSIFTWNILVTSILVLIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVYI+ALPFFG+V+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYILALPFFGVVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMTF+IAVPTGIKF NW+GTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGIKFFNWVGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPL+FHVTDSYFVVAHFHYVLFGTIVF+T+AG+YFWFPK Sbjct: 361 FSVGFAVTFLLGGLSGVLLASPPLNFHVTDSYFVVAHFHYVLFGTIVFSTFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG EGMPRRYADYLPTDGF LNIVSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILGV+M PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGVAMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ERLRAE+H GR Sbjct: 541 PAFELHYPHMVERLRAEAHVGR 562 >tr|D5PIQ8|D5PIQ8_9MYCO Tax_Id=525368 (ctaD2)SubName: Full=Cytochrome c oxidase, subunit I; EC=1.9.3.1;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 585 Score = 952 bits (2460), Expect = 0.0 Identities = 444/565 (78%), Positives = 485/565 (85%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 +T AP GEL A RP+P R GP+ L+YKL+TTTDHKLIG+MY V CF+FFFIGGLMAL Sbjct: 5 LTAEAPPLGELEAVRPYPDRTGPKGNLIYKLITTTDHKLIGIMYTVTCFVFFFIGGLMAL 64 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQYNQLFTMHGT+MLL YATP+VFG ANLV+PLQIGAPDVAFPR Sbjct: 65 LMRTELAAPGLQFLSNEQYNQLFTMHGTIMLLLYATPVVFGLANLVLPLQIGAPDVAFPR 124 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFG +A WTAYTPLS+A+HSPGAGGDLW Sbjct: 125 LNAFSFWLFLFGGLVAMGGFIVPGGAADFGWTAYTPLSDAVHSPGAGGDLWITGLIVAGL 184 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS+++L+AFP+LT+ALFGLAADR+L Sbjct: 185 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHL 244 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+D ANGG +LW+HLFWFFGHPEVYI+ALPFFG+VTEI PVFSRKPVFGYTTLVYAT Sbjct: 245 GAHVYDAANGGVLLWQHLFWFFGHPEVYIVALPFFGVVTEIIPVFSRKPVFGYTTLVYAT 304 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQ+TFETPML Sbjct: 305 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQITFETPML 364 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTD+YFVVAHFHYVLFGTIVFATYAGVYFWFPK Sbjct: 365 FSVGFLVTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHYVLFGTIVFATYAGVYFWFPK 424 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG GMPRRYADYLP+DGF NI ST+G Sbjct: 425 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDMGMPRRYADYLPSDGFQPYNIASTVG 484 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILGVSM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 485 AFILGVSMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 544 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHM+ERLRAE+H GR G Sbjct: 545 PAFELHYPHMVERLRAEAHVGRAHG 569 >tr|Q1B6D9|Q1B6D9_MYCSS Tax_Id=164756 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium sp.] Length = 582 Score = 951 bits (2458), Expect = 0.0 Identities = 441/562 (78%), Positives = 490/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MTT + L ARRPFP+RLGP+ L+YK++TTTDHKLIG+MY VACF FF +GGLMAL Sbjct: 1 MTTESVVQPTLTARRPFPERLGPKGNLIYKVITTTDHKLIGIMYCVACFAFFLVGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGT MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FMRTELAVPGLQFLSNEQYNQLFTMHGTAMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNALSFWLF+FGA IA WTAYTPLS+A+HSPG GGDLW Sbjct: 121 LNALSFWLFVFGALIALAGFITPSGAADFGWTAYTPLSDAVHSPGPGGDLWIFGLGVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+ FPLLT+ALF LAADR+L Sbjct: 181 GTILGGVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLIFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVY+IALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYVIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 I+I ALS+AVWAHH++ATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMW+GQLTF+TPML Sbjct: 301 IAIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWRGQLTFQTPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFLLTFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HW+G EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDEKLGKLHFWLTFIGFHTTFLVQHWVGDEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WN+F+SWRYGEPV VDDPWG+GNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGISTLPFLWNIFRSWRYGEPVVVDDPWGHGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ER+RAE+H GR Sbjct: 541 PAFELHYPHMVERMRAEAHIGR 562 >tr|A1UIN7|A1UIN7_MYCSK Tax_Id=189918 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium sp.] Length = 582 Score = 951 bits (2458), Expect = 0.0 Identities = 441/562 (78%), Positives = 490/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MTT + L ARRPFP+RLGP+ L+YK++TTTDHKLIG+MY VACF FF +GGLMAL Sbjct: 1 MTTESVVQPTLTARRPFPERLGPKGNLIYKVITTTDHKLIGIMYCVACFAFFLVGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGT MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FMRTELAVPGLQFLSNEQYNQLFTMHGTAMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNALSFWLF+FGA IA WTAYTPLS+A+HSPG GGDLW Sbjct: 121 LNALSFWLFVFGALIALAGFITPSGAADFGWTAYTPLSDAVHSPGPGGDLWIFGLGVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+ FPLLT+ALF LAADR+L Sbjct: 181 GTILGGVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLIFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVY+IALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYVIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 I+I ALS+AVWAHH++ATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMW+GQLTF+TPML Sbjct: 301 IAIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWRGQLTFQTPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFLLTFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HW+G EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDEKLGKLHFWLTFIGFHTTFLVQHWVGDEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WN+F+SWRYGEPV VDDPWG+GNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGISTLPFLWNIFRSWRYGEPVVVDDPWGHGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ER+RAE+H GR Sbjct: 541 PAFELHYPHMVERMRAEAHIGR 562 >tr|A3Q250|A3Q250_MYCSJ Tax_Id=164757 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium sp.] Length = 582 Score = 951 bits (2457), Expect = 0.0 Identities = 441/562 (78%), Positives = 489/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MTT + L RRPFP+RLGP+ L+YKL+TTTDHKLIG+MY VACF FF +GGLMAL Sbjct: 1 MTTESVVQPTLTVRRPFPERLGPKGNLIYKLITTTDHKLIGIMYCVACFAFFLVGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +RTELAVPGLQFLSNEQYNQLFTMHGT MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 FIRTELAVPGLQFLSNEQYNQLFTMHGTAMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNALSFWLF+FGA IA WTAYTPLS+A+HSPG GGDLW Sbjct: 121 LNALSFWLFVFGALIALAGFITPSGAADFGWTAYTPLSDAVHSPGPGGDLWIFGLGVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNMITTVVCMRAPGM MFRMPIFTWNILVTS++VL+ FPLLT+ALF LAADR+L Sbjct: 181 GTILGGVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLIFPLLTAALFALAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +LW+HLFWFFGHPEVY+IALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHIYDPANGGVLLWQHLFWFFGHPEVYVIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 I+I ALS+AVWAHH++ATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMW+GQLTF+TPML Sbjct: 301 IAIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWRGQLTFQTPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFLLTFLLGGLSGVLLASPPLDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HW+G EGMPRRYADYLP+DGFTTLNIVSTIG Sbjct: 421 MTGRLLDEKLGKLHFWLTFIGFHTTFLVQHWVGDEGMPRRYADYLPSDGFTTLNIVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG+S LPF+WN+F+SWRYGEPV VDDPWG+GNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGISTLPFLWNIFRSWRYGEPVVVDDPWGHGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ER+RAE+H GR Sbjct: 541 PAFELHYPHMVERMRAEAHIGR 562 >sp|Q9CBQ5|COX1_MYCLE Tax_Id=1769 (ctaD)RecName: Full=Probable cytochrome c oxidase subunit 1; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide I; AltName: Full=Cytochrome aa3 subunit 1;[Mycobacterium leprae] Length = 574 Score = 948 bits (2451), Expect = 0.0 Identities = 443/562 (78%), Positives = 489/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT A S+GEL A RP+P R GP+ L+YKL+TTTDHK+IG+MY VACFIFFF+GGL+AL Sbjct: 1 MTAEALSSGELKAIRPYPARTGPKGNLVYKLITTTDHKMIGIMYCVACFIFFFVGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA+I WTAYTPL++A+HSPG GGDLW Sbjct: 121 LNAFSFWLFLFGAAIGMAGFITPGGAADFGWTAYTPLTDAIHSPGVGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVC+RAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCLRAPGMTMFRMPIFTWNILVTSILVLIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NW+GTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWVGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVF+T+AG+YFWFPK Sbjct: 361 FSVGFAVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFSTFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HWLG GMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDEQLGKLHFWLTFIGFHTTFLVQHWLGDMGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 SFILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 SFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ERLR E++ GR Sbjct: 541 PAFELHYPHMVERLRDEAYVGR 562 >tr|B8ZS43|B8ZS43_MYCLB Tax_Id=561304 SubName: Full=Cytochrome C oxidase, polypeptide I;[Mycobacterium leprae] Length = 574 Score = 948 bits (2451), Expect = 0.0 Identities = 443/562 (78%), Positives = 489/562 (87%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT A S+GEL A RP+P R GP+ L+YKL+TTTDHK+IG+MY VACFIFFF+GGL+AL Sbjct: 1 MTAEALSSGELKAIRPYPARTGPKGNLVYKLITTTDHKMIGIMYCVACFIFFFVGGLLAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLLFYATPIVFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA+I WTAYTPL++A+HSPG GGDLW Sbjct: 121 LNAFSFWLFLFGAAIGMAGFITPGGAADFGWTAYTPLTDAIHSPGVGGDLWIMGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVC+RAPGM MFRMPIFTWNILVTS++VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCLRAPGMTMFRMPIFTWNILVTSILVLIAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++D ANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NW+GTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWVGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHVTDSYFVVAHFHYVLFGTIVF+T+AG+YFWFPK Sbjct: 361 FSVGFAVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFSTFAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD++LGKLHFWLT IGFHTTFLV HWLG GMPRRYADYLPTDGF LN+VSTIG Sbjct: 421 MTGRLLDEQLGKLHFWLTFIGFHTTFLVQHWLGDMGMPRRYADYLPTDGFQGLNVVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 SFILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 SFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ERLR E++ GR Sbjct: 541 PAFELHYPHMVERLRDEAYVGR 562 >sp|Q73VC3|COX1_MYCPA Tax_Id=1770 (ctaD)RecName: Full=Probable cytochrome c oxidase subunit 1; EC=1.9.3.1; AltName: Full=Cytochrome c oxidase polypeptide I; AltName: Full=Cytochrome aa3 subunit 1;[Mycobacterium paratuberculosis] Length = 581 Score = 946 bits (2444), Expect = 0.0 Identities = 442/565 (78%), Positives = 483/565 (85%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP GEL A RP+P R GP+ L+YKL+TTTDHK+IG+MY V CF FFFIGGLMAL Sbjct: 1 MTAEAPPLGELEAVRPYPDRTGPKGNLVYKLITTTDHKMIGIMYTVTCFAFFFIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+RTELA PGLQFLSNEQ+NQLFTMHGT+MLL YATP+VFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLLYATPVVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFG IA WTAYTPLS+A+HSPGAGGDLW Sbjct: 121 LNAFSFWLFLFGGLIAASGFIVPGGAADFGWTAYTPLSDAVHSPGAGGDLWITGLIVAGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTS+++L+AFP+LT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHV+D ANGG +LW+HLFWFFGHPEVYIIALPFFGI+TEI PVF+RKPVFGYTTLVYAT Sbjct: 241 GAHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFARKPVFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 F +LASPPLDFHVTD+YFVVAHFHYVLFGTIVFAT+AGVYFWFPK Sbjct: 361 FCVGFLLTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHYVLFGTIVFATFAGVYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT IGFHTTFLV HWLG GMPRRYADYLP+DGF N+ ST+G Sbjct: 421 MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG SM PFVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGRTQG 565 PAFELHYPHM+ERLRAE+H GR G Sbjct: 541 PAFELHYPHMVERLRAEAHVGRAHG 565 >tr|A4T6B2|A4T6B2_MYCGI Tax_Id=350054 SubName: Full=Cytochrome-c oxidase; EC=1.9.3.1;[Mycobacterium gilvum] Length = 592 Score = 946 bits (2444), Expect = 0.0 Identities = 443/555 (79%), Positives = 483/555 (87%) Query: 11 LLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMALLLRTELAVPG 70 L RRPFP R+GP+ L+YKL+TTTDHKLIG+MYVV CF+FF IGG+MAL +RTELA+PG Sbjct: 22 LTPRRPFPARVGPKGNLIYKLITTTDHKLIGIMYVVTCFVFFLIGGIMALFIRTELAMPG 81 Query: 71 LQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPRLNALSFWLFL 130 LQFLSNEQYNQLFTMHGT MLLFYATPIVFGFANLV+PLQIGAPDVAFPRLNALSFWLFL Sbjct: 82 LQFLSNEQYNQLFTMHGTAMLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNALSFWLFL 141 Query: 131 FGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXXXXXXXAVNMI 190 FGA IA WTAY+PLS+A+HSPG G DLW AVNM+ Sbjct: 142 FGALIALAGFITPGGAADFGWTAYSPLSDAIHSPGVGVDLWIFGLGVGGLGTILGAVNMV 201 Query: 191 TTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNLGAHVFDPANG 250 TTVVCMRAPGM MFRMPIFTWNILVTS++VL+ FPLLT+ALFGLAADR+LGAHV+DPANG Sbjct: 202 TTVVCMRAPGMTMFRMPIFTWNILVTSILVLLIFPLLTAALFGLAADRHLGAHVYDPANG 261 Query: 251 GTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYATISIGALSIAV 310 G +LW+HLFW+FGHPEVY+IALPFFGI++E+ PVFSRKP+FGYTTLVYAT SI ALS+AV Sbjct: 262 GVILWQHLFWYFGHPEVYVIALPFFGIISEVIPVFSRKPIFGYTTLVYATFSIAALSMAV 321 Query: 311 WAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPMLFSXXXXXXXX 370 WAHH++ATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPMLFS Sbjct: 322 WAHHMFATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPMLFSVGFILTFL 381 Query: 371 XXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDDRL 430 +LASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLD+RL Sbjct: 382 LGGLSGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDERL 441 Query: 431 GKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIGSFILGVSMLP 490 GKLHFWLT IGFH TFLV HWLG EGMPRRYADYLPTDGFTTLN +STIG+F+LG SMLP Sbjct: 442 GKLHFWLTFIGFHLTFLVQHWLGDEGMPRRYADYLPTDGFTTLNGISTIGAFMLGASMLP 501 Query: 491 FVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHM 550 FVWNVFKSWRYGE VTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHM Sbjct: 502 FVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHM 561 Query: 551 IERLRAESHPGRTQG 565 ER+RAE+H GR+ G Sbjct: 562 RERMRAEAHAGRSHG 576 >tr|B1MDZ6|B1MDZ6_MYCA9 Tax_Id=561007 SubName: Full=Probable cytochrome c oxidase polypeptide I;[Mycobacterium abscessus] Length = 564 Score = 939 bits (2426), Expect = 0.0 Identities = 442/561 (78%), Positives = 482/561 (85%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP G L A RPFP R+G R TL+Y+L+TTTDHKLIG+MY+VACF FF IGGLMAL Sbjct: 1 MTAEAPPIGGLQASRPFPPRMGARGTLIYRLITTTDHKLIGIMYLVACFAFFLIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 +R ELAVPGLQFLSNEQ+NQLFTMHGTVMLLFYATPIVFGFAN+V+PLQIGAPDVAFPR Sbjct: 61 FMRAELAVPGLQFLSNEQFNQLFTMHGTVMLLFYATPIVFGFANVVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNA SFWLFLFGA I WTAYTPL++A+HSPGAG DLW Sbjct: 121 LNAFSFWLFLFGALIGIAGFITPGGAADFGWTAYTPLTDAIHSPGAGADLWIMGLAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVCMRAPGM MFRMPIFTWNILVTSV+VL+AFPLLT+ALFGLAADR+L Sbjct: 181 GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSVLVLLAFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAHVFDPANGG +LW+HLFWFFGHPEVYIIALPFFGIV+EIFPVFSRKP+FGYTTL+YAT Sbjct: 241 GAHVFDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLIYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 + I ALSIAVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPM+ Sbjct: 301 LGIAALSIAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPMI 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LA PP+DFHVTDSYFV+AHFHYVLFGTIVFATYAG+YFWFPK Sbjct: 361 FSVGFLVTFLFGGLTGVLLAMPPVDFHVTDSYFVIAHFHYVLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGK HFWLT IGFH+TFLV HWLG +GMPRRYADYLPTDGFT LN ST+G Sbjct: 421 MTGRLLDERLGKFHFWLTFIGFHSTFLVQHWLGNQGMPRRYADYLPTDGFTFLNSFSTVG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FILG S LPF+WNVFKS+RYGE VTVDDPWGYGNSLEWATSCPPPRHNF+ELPRIRSER Sbjct: 481 AFILGASTLPFLWNVFKSYRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFSELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPG 561 PAFELHYPHM ER+RAE+H G Sbjct: 541 PAFELHYPHMSERMRAEAHVG 561 >tr|B2HHM4|B2HHM4_MYCMM Tax_Id=216594 (ctaD_1)SubName: Full=Cytochrome C oxidase polypeptide I CtaD_1;[Mycobacterium marinum] Length = 577 Score = 937 bits (2423), Expect = 0.0 Identities = 433/562 (77%), Positives = 487/562 (86%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MTT AP A +L ARRPFP R+GP+ +L+YK++TTTDHK+IG+MY+VACFIFFFIGGLMAL Sbjct: 1 MTTEAPPAHDLEARRPFPPRMGPKGSLIYKIITTTDHKMIGIMYMVACFIFFFIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+R ELA PGLQFLSNEQYNQLFTMHGT MLLFYATP+VFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LMRAELATPGLQFLSNEQYNQLFTMHGTAMLLFYATPVVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNALSFWLF+FGA IA WTAYTPLSNA HSPG G DLW Sbjct: 121 LNALSFWLFVFGALIALSGFIVPGGAADFGWTAYTPLSNAAHSPGVGPDLWILGLAVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 VNM+TTVVC+RAPGM MFRMPIFTWNI+VTS++VL+ FPLLT+ALFGLAADR+L Sbjct: 181 GTILGGVNMLTTVVCLRAPGMTMFRMPIFTWNIMVTSLLVLMIFPLLTAALFGLAADRHL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG +L++HLFWFFGHPEVY+IALPFFGIV+E+ PVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDPANGGVILFQHLFWFFGHPEVYVIALPFFGIVSEVIPVFSRKPIFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 +SI ALS+AVWAHH++ATGAVLLPFFSFMTF+IAVPTG+KF NWIGTMW+GQLTFE+PML Sbjct: 301 LSIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGLKFFNWIGTMWRGQLTFESPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 FS +LASPPLDFHV+D+YFVVAHFHY LFGTIVFATYAG+YFWFPK Sbjct: 361 FSLGFLVTFLAGGLTGVLLASPPLDFHVSDTYFVVAHFHYTLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RL K HFWLT +GFH TFLV HWLG GMPRRYADYLPTDGF TLN++STIG Sbjct: 421 MTGRLLDERLAKFHFWLTFLGFHATFLVQHWLGNSGMPRRYADYLPTDGFQTLNVISTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +F LGVS+LPFVWNVFKSWR+GEPV VDDPWG+GNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFTLGVSVLPFVWNVFKSWRFGEPVLVDDPWGHGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM++RLRAE+H GR Sbjct: 541 PAFELHYPHMVKRLRAEAHVGR 562 >tr|D5P9M7|D5P9M7_9MYCO Tax_Id=525368 (ctaD)SubName: Full=Cytochrome c oxidase, subunit I; EC=1.9.3.1;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 581 Score = 936 bits (2420), Expect = 0.0 Identities = 438/562 (77%), Positives = 483/562 (85%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MT AP L ARRPFP R+GP+ L+YK+++TTDHK+IG+MY+VACF+FFFIGGLMAL Sbjct: 1 MTAEAPPTAALEARRPFPDRIGPKGNLIYKVISTTDHKMIGIMYMVACFVFFFIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 LLR ELA PGLQFLSNEQYNQLFTMHGT MLLFYATP+VFGFANLV+PLQIGAPDVAFPR Sbjct: 61 LLRLELARPGLQFLSNEQYNQLFTMHGTAMLLFYATPVVFGFANLVLPLQIGAPDVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXX 180 LNALSFWLF+ GA IA WTAYTPLS+A+HSPGAGGDLW Sbjct: 121 LNALSFWLFVCGALIALGGFVIPGGAADFGWTAYTPLSDAVHSPGAGGDLWILGVGVGGL 180 Query: 181 XXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL 240 AVNMITTVVC+RAPGM MFRMPIFTWNILVTSV+VL+ FPLLT+ALF L ADR L Sbjct: 181 GTILGAVNMITTVVCLRAPGMTMFRMPIFTWNILVTSVLVLIVFPLLTAALFALEADRRL 240 Query: 241 GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYAT 300 GAH++DPANGG ML++HLFWFFGHPEVY+IALPFFGI++EI PVFSRKP+FGYTTLVYAT Sbjct: 241 GAHIYDPANGGVMLFQHLFWFFGHPEVYVIALPFFGIISEIVPVFSRKPLFGYTTLVYAT 300 Query: 301 ISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPML 360 ++I ALSIAVWAHH+YATGAVLLPFFSFMTF+IAVPTGIKF NWIGTMWKGQLTFETPML Sbjct: 301 LAIAALSIAVWAHHMYATGAVLLPFFSFMTFLIAVPTGIKFFNWIGTMWKGQLTFETPML 360 Query: 361 FSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPK 420 F+ +LASPPLDFH+TD+YFVVAHFHY LFGTIVFATYAG+YFWFPK Sbjct: 361 FAIGFLLTFLIGGLTGVLLASPPLDFHITDTYFVVAHFHYTLFGTIVFATYAGIYFWFPK 420 Query: 421 MTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG 480 MTGRLLD+RLGKLHFWLT GFHTTFLV HWLG GMPRRYADYLPTDGF TLN+VSTIG Sbjct: 421 MTGRLLDERLGKLHFWLTFAGFHTTFLVQHWLGDSGMPRRYADYLPTDGFQTLNLVSTIG 480 Query: 481 SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER 540 +FIL S+LPFVWNVFKSWRYGEPV VDDPWG+GNSLEWATSCPPPRHNFTELPRIRSER Sbjct: 481 AFILAASVLPFVWNVFKSWRYGEPVLVDDPWGHGNSLEWATSCPPPRHNFTELPRIRSER 540 Query: 541 PAFELHYPHMIERLRAESHPGR 562 PAFELHYPHM+ R+RAE++ GR Sbjct: 541 PAFELHYPHMVGRMRAEAYVGR 562 >tr|A0PNG8|A0PNG8_MYCUA Tax_Id=362242 (ctaD_1)SubName: Full=Cytochrome C oxidase polypeptide I CtaD_1;[Mycobacterium ulcerans] Length = 578 Score = 920 bits (2378), Expect = 0.0 Identities = 428/563 (76%), Positives = 482/563 (85%), Gaps = 1/563 (0%) Query: 1 MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMAL 60 MTT AP A +L ARRPFP R+GP+ +L+YK++TTTDHK+IG+MY+VACFIFFFIGGLMAL Sbjct: 1 MTTEAPPAHDLEARRPFPPRMGPKGSLIYKIITTTDHKMIGIMYMVACFIFFFIGGLMAL 60 Query: 61 LLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPR 120 L+R LA PGLQFLSNEQYNQLFTMHGT MLLFYATP+VFGFANLV+PLQIGA DVAFPR Sbjct: 61 LMRAALATPGLQFLSNEQYNQLFTMHGTAMLLFYATPVVFGFANLVLPLQIGAADVAFPR 120 Query: 121 LNALSFWLFLFGASIAXXXXXXXXXXXXXXW-TAYTPLSNAMHSPGAGGDLWXXXXXXXX 179 LNALSFWLF+FGA IA W TAYTPLSNA HSPG G DLW Sbjct: 121 LNALSFWLFVFGALIALSGFIVPGGAADFGWRTAYTPLSNAAHSPGVGPDLWILGLAVGG 180 Query: 180 XXXXXXAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRN 239 VNM+TTVVC+RAPGM MFRMPIFTWNI+VTS++VL+ FPLLT+ALFGLAADR+ Sbjct: 181 LGTILGGVNMLTTVVCLRAPGMTMFRMPIFTWNIMVTSLLVLMIFPLLTAALFGLAADRH 240 Query: 240 LGAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYA 299 GAH++DPANGG +L++ LFWFFGHPEVY+IALPFFGIV+E+ PVFSRKP+FGYTTLVYA Sbjct: 241 FGAHIYDPANGGVILFQQLFWFFGHPEVYVIALPFFGIVSEVIPVFSRKPIFGYTTLVYA 300 Query: 300 TISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPM 359 T+SI ALS+AVWAHH++ATGAVLLPFFSFMTF+IAVPTG+KF NWIGTMW+GQLTFE+PM Sbjct: 301 TLSIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGLKFFNWIGTMWRGQLTFESPM 360 Query: 360 LFSXXXXXXXXXXXXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFP 419 LFS +LASPPLDFHV+D+YFVVAHFHY LFGTIVFATYAG+YFWFP Sbjct: 361 LFSLGFLVTFLAGGLTGVLLASPPLDFHVSDTYFVVAHFHYTLFGTIVFATYAGIYFWFP 420 Query: 420 KMTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTI 479 KMTGRLLD+RL K HFWLT +GFH TFLV HWLG GMPRRYADYLPTDGF TLN++STI Sbjct: 421 KMTGRLLDERLAKFHFWLTFLGFHATFLVQHWLGNSGMPRRYADYLPTDGFQTLNVISTI 480 Query: 480 GSFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE 539 G+F LGVS+LPFVWNVFKSWR+GEPV VDDPWG+GNSL WATSCPPPRHNFTELPRIRSE Sbjct: 481 GAFTLGVSVLPFVWNVFKSWRFGEPVLVDDPWGHGNSLGWATSCPPPRHNFTELPRIRSE 540 Query: 540 RPAFELHYPHMIERLRAESHPGR 562 RPAFELHYPHM++RLRAE+H GR Sbjct: 541 RPAFELHYPHMVKRLRAEAHVGR 563 >tr|B1MBS7|B1MBS7_MYCA9 Tax_Id=561007 SubName: Full=Probable cytochrome c oxidase subunit I;[Mycobacterium abscessus] Length = 564 Score = 912 bits (2356), Expect = 0.0 Identities = 432/552 (78%), Positives = 473/552 (85%), Gaps = 1/552 (0%) Query: 13 ARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMALLLRTELAVPGLQ 72 A+RPFP R G R TL+Y+L+ TTDHKLIG+MYVV CF FFF+GGLMALL+R EL PGLQ Sbjct: 13 AQRPFPAR-GLRGTLVYRLLGTTDHKLIGVMYVVTCFGFFFVGGLMALLMRAELVHPGLQ 71 Query: 73 FLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPRLNALSFWLFLFG 132 FLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLV+PL IGAPDVAFPRLNALS+WLFL G Sbjct: 72 FLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVLPLHIGAPDVAFPRLNALSYWLFLCG 131 Query: 133 ASIAXXXXXXXXXXXXXXWTAYTPLSNAMHSPGAGGDLWXXXXXXXXXXXXXXAVNMITT 192 I WTAY PLSNA+HSPG GGDLW AVNMITT Sbjct: 132 GLITLAGFIAPGGAADFGWTAYAPLSNAVHSPGVGGDLWIMGLAVGGVGTILGAVNMITT 191 Query: 193 VVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNLGAHVFDPANGGT 252 VVCMRAPGM MFRMPIFTWNILVTS +VL+AFPLLT+ALFGLAADR+LGAH+FDPANGG Sbjct: 192 VVCMRAPGMTMFRMPIFTWNILVTSWLVLIAFPLLTAALFGLAADRHLGAHIFDPANGGP 251 Query: 253 MLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYATISIGALSIAVWA 312 +LW+HLFWFFGHPEVYI+ALPFFGIV+EIFPVFSRKP+FGY TLVYAT+ IG LS+AVWA Sbjct: 252 ILWQHLFWFFGHPEVYIVALPFFGIVSEIFPVFSRKPIFGYHTLVYATVGIGILSVAVWA 311 Query: 313 HHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPMLFSXXXXXXXXXX 372 HH++ATGAVLLPFFSFMT++IAVPTGIKF NWIGTMWKGQLTFETPMLF+ Sbjct: 312 HHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPMLFAVGFLVTFLFG 371 Query: 373 XXXXXILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDDRLGK 432 +LASPPLDFHVTDSYFVVAHFHYVLFGTIVF+T+AGVYFWFPKMTGRLLD+RLGK Sbjct: 372 GLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFSTFAGVYFWFPKMTGRLLDERLGK 431 Query: 433 LHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIGSFILGVSMLPFV 492 HFWLT IGFH+TFLV HWLG EGMPRRYADYLP+DGFT LNIVST+G+FILG SMLPF+ Sbjct: 432 FHFWLTFIGFHSTFLVQHWLGNEGMPRRYADYLPSDGFTDLNIVSTVGAFILGASMLPFL 491 Query: 493 WNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMIE 552 WNVF S+RYGE VTVDDPWGYGNSLEWATSCPPPRHNF+ELP+IRSERPAFELHYPHM E Sbjct: 492 WNVFTSYRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFSELPQIRSERPAFELHYPHMSE 551 Query: 553 RLRAESHPGRTQ 564 R+RAE+H R Q Sbjct: 552 RMRAEAHVVRAQ 563 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.329 0.143 0.478 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 4,837,865,773 Number of extensions: 199522418 Number of successful extensions: 1118195 Number of sequences better than 10.0: 126737 Number of HSP's gapped: 655190 Number of HSP's successfully gapped: 127290 Length of query: 583 Length of database: 4,236,830,644 Length adjustment: 144 Effective length of query: 439 Effective length of database: 2,435,698,228 Effective search space: 1069271522092 Effective search space used: 1069271522092 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 84 (37.0 bits)