BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_4626
         (1037 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0R152|A0R152_MYCS2 Tax_Id=246196 SubName: Full=Ribonuclease,...   934   0.0  
tr|Q1B626|Q1B626_MYCSS Tax_Id=164756 SubName: Full=Ribonuclease,...   847   0.0  
tr|A3Q2F6|A3Q2F6_MYCSJ Tax_Id=164757 SubName: Full=Ribonuclease,...   847   0.0  
tr|A1UJ10|A1UJ10_MYCSK Tax_Id=189918 SubName: Full=Ribonuclease,...   847   0.0  
tr|A1TC24|A1TC24_MYCVP Tax_Id=350058 SubName: Full=Ribonuclease,...   845   0.0  
tr|A4T2J1|A4T2J1_MYCGI Tax_Id=350054 SubName: Full=Ribonuclease,...   829   0.0  
tr|D5PH73|D5PH73_9MYCO Tax_Id=525368 (rne)SubName: Full=Ribonucl...   815   0.0  
tr|Q73XP2|Q73XP2_MYCPA Tax_Id=1770 (rne)SubName: Full=Rne;[Mycob...   812   0.0  
tr|A0QDG7|A0QDG7_MYCA1 Tax_Id=243243 SubName: Full=Rne protein;[...   812   0.0  
tr|B2HMG4|B2HMG4_MYCMM Tax_Id=216594 (rne)SubName: Full=Ribonucl...   805   0.0  
tr|A0PU18|A0PU18_MYCUA Tax_Id=362242 (rne)SubName: Full=Ribonucl...   798   0.0  
tr|B1MMY0|B1MMY0_MYCA9 Tax_Id=561007 SubName: Full=Possible ribo...   790   0.0  
tr|Q7TYK3|Q7TYK3_MYCBO Tax_Id=1765 (rne)SubName: Full=POSSIBLE R...   787   0.0  
tr|P71905|P71905_MYCTU Tax_Id=1773 (rne)SubName: Full=POSSIBLE R...   787   0.0  
tr|C6DN37|C6DN37_MYCTK Tax_Id=478434 SubName: Full=Ribonuclease ...   787   0.0  
tr|C1AER1|C1AER1_MYCBT Tax_Id=561275 (rne)SubName: Full=Putative...   787   0.0  
tr|A5WQ59|A5WQ59_MYCTF Tax_Id=336982 SubName: Full=Ribonuclease ...   787   0.0  
tr|A5U5E0|A5U5E0_MYCTA Tax_Id=419947 (rne)SubName: Full=Putative...   787   0.0  
tr|A1KLE0|A1KLE0_MYCBP Tax_Id=410289 (rne)SubName: Full=Possible...   787   0.0  
tr|D6G4L6|D6G4L6_MYCTU Tax_Id=478435 SubName: Full=Ribonuclease ...   787   0.0  
tr|D6FY42|D6FY42_MYCTU Tax_Id=611304 SubName: Full=Ribonuclease ...   787   0.0  
tr|D6FJ06|D6FJ06_MYCTU Tax_Id=611303 SubName: Full=Ribonuclease ...   787   0.0  
tr|D6F6P4|D6F6P4_MYCTU Tax_Id=611302 SubName: Full=Ribonuclease ...   787   0.0  
tr|D5ZH30|D5ZH30_MYCTU Tax_Id=537210 SubName: Full=Ribonuclease ...   787   0.0  
tr|D5YU61|D5YU61_MYCTU Tax_Id=515616 SubName: Full=Ribonuclease ...   787   0.0  
tr|D5YHS4|D5YHS4_MYCTU Tax_Id=520140 SubName: Full=Ribonuclease ...   787   0.0  
tr|D5Y534|D5Y534_MYCTU Tax_Id=520141 SubName: Full=Ribonuclease ...   787   0.0  
tr|D5XVM1|D5XVM1_MYCTU Tax_Id=515617 SubName: Full=Ribonuclease ...   787   0.0  
tr|A4KJJ5|A4KJJ5_MYCTU Tax_Id=395095 SubName: Full=Ribonuclease ...   787   0.0  
tr|A2VKG7|A2VKG7_MYCTU Tax_Id=348776 SubName: Full=Ribonuclease ...   787   0.0  
tr|Q9CBZ1|Q9CBZ1_MYCLE Tax_Id=1769 SubName: Full=Possible ribonu...   778   0.0  
tr|B8ZRN6|B8ZRN6_MYCLB Tax_Id=561304 SubName: Full=Possible ribo...   778   0.0  
tr|Q7D748|Q7D748_MYCTU Tax_Id=1773 SubName: Full=Cytoplasmic axi...   723   0.0  
tr|D5PPP8|D5PPP8_COREQ Tax_Id=525370 SubName: Full=Rne/Rng famil...   699   0.0  
tr|Q0SH48|Q0SH48_RHOSR Tax_Id=101510 SubName: Full=Probable ribo...   697   0.0  
tr|C1AVK3|C1AVK3_RHOOB Tax_Id=632772 SubName: Full=Putative ribo...   694   0.0  
tr|D5UXK7|D5UXK7_TSUPA Tax_Id=521096 SubName: Full=Ribonuclease,...   689   0.0  
tr|C1A1L8|C1A1L8_RHOE4 Tax_Id=234621 SubName: Full=Putative ribo...   687   0.0  
tr|C3JRV1|C3JRV1_RHOER Tax_Id=596309 SubName: Full=Possible ribo...   687   0.0  
tr|D0LAJ7|D0LAJ7_GORB4 Tax_Id=526226 SubName: Full=Ribonuclease,...   681   0.0  
tr|Q5Z044|Q5Z044_NOCFA Tax_Id=37329 SubName: Full=Putative uncha...   665   0.0  
tr|Q6NFV4|Q6NFV4_CORDI Tax_Id=1717 SubName: Full=Putative RNA-as...   619   e-175
tr|C6WR86|C6WR86_ACTMD Tax_Id=446462 SubName: Full=Ribonuclease,...   619   e-175
tr|C7MPQ3|C7MPQ3_SACVD Tax_Id=471857 SubName: Full=Ribonuclease,...   617   e-174
tr|A4F9K3|A4F9K3_SACEN Tax_Id=405948 SubName: Full=Ribonuclease,...   609   e-172

>tr|A0R152|A0R152_MYCS2 Tax_Id=246196 SubName: Full=Ribonuclease,
           Rne/Rng family protein; EC=3.1.4.-;[Mycobacterium
           smegmatis]
          Length = 1037

 Score =  934 bits (2415), Expect = 0.0
 Identities = 497/595 (83%), Positives = 497/595 (83%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAK              PPILSEAEFLAR
Sbjct: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLAR 376

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN
Sbjct: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH
Sbjct: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE
Sbjct: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GVKEEDIRSDVERLQKRWSEI                 LYEEPDVLVKVIRDLFNEDFSS
Sbjct: 557 GVKEEDIRSDVERLQKRWSEIEAKAAEVTEKKAGAAVALYEEPDVLVKVIRDLFNEDFSS 616

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL
Sbjct: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLR       
Sbjct: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIVV 736

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC
Sbjct: 737 IDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796

Query: 797 THCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVHVAKVPD 856
           THCGGRGIVLHGDPIDSASSN                         AARTEEVHVAKVPD
Sbjct: 797 THCGGRGIVLHGDPIDSASSNGGRKSDSSGGGGSGGGRRGKRGKKGAARTEEVHVAKVPD 856

Query: 857 HTPGEHPMFKAMAAANGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHDADER 911
           HTPGEHPMFKAMAAANGK                              EHDADER
Sbjct: 857 HTPGEHPMFKAMAAANGKHEGDEDHEDHEDHETAEDTTAAEVRDDTRDEHDADER 911



 Score =  132 bits (333), Expect = 2e-28
 Identities = 67/67 (100%), Positives = 67/67 (100%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK
Sbjct: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60

Query: 61 ADAERVR 67
          ADAERVR
Sbjct: 61 ADAERVR 67



 Score =  108 bits (269), Expect = 6e-21
 Identities = 52/52 (100%), Positives = 52/52 (100%)

Query: 146 FRGAVLVGDEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFEPAVV 197
           FRGAVLVGDEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFEPAVV
Sbjct: 146 FRGAVLVGDEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFEPAVV 197


>tr|Q1B626|Q1B626_MYCSS Tax_Id=164756 SubName: Full=Ribonuclease,
           Rne/Rng family;[Mycobacterium sp.]
          Length = 991

 Score =  847 bits (2189), Expect = 0.0
 Identities = 453/563 (80%), Positives = 466/563 (82%), Gaps = 9/563 (1%)

Query: 317 NTVVHERAPRTE--RSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFL 374
           NTVVHER PR    +S  SDD+EIQGISGSTRLEAK              PPILSEAEFL
Sbjct: 285 NTVVHERPPRERGGKSGDSDDNEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFL 344

Query: 375 ARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIV 434
           ARREAVER M+VRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTS ASASLVGNIYLGIV
Sbjct: 345 ARREAVERVMVVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSPASASLVGNIYLGIV 404

Query: 435 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 494
           QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV
Sbjct: 405 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 464

Query: 495 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTA 554
           GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVP+DAGVIIRTA
Sbjct: 465 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPADAGVIIRTA 524

Query: 555 SEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDF 614
           SEGVKE+DIRSDV RLQ+RW++I                 LYEEPDVLVKVIRDLFNEDF
Sbjct: 525 SEGVKEDDIRSDVNRLQERWTQIEAKAAEITAKKAGAAVALYEEPDVLVKVIRDLFNEDF 584

Query: 615 SSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAG---PDAPDVFAVHRIDEQLAKAMD 671
           S LIVSGDEAWNTINSYVE+VAPDLMPRLTKYEPAG    + PDVFAVHRIDEQLAKAMD
Sbjct: 585 SGLIVSGDEAWNTINSYVESVAPDLMPRLTKYEPAGNPNGEGPDVFAVHRIDEQLAKAMD 644

Query: 672 RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXX 731
           RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLR  
Sbjct: 645 RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDI 704

Query: 732 XXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEA 791
                     MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGL+EA
Sbjct: 705 GGIIVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEA 764

Query: 792 FSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVHV 851
           FST C HC GRGIVLHGDPID+AS N                         AA    V V
Sbjct: 765 FSTPCPHCAGRGIVLHGDPIDNASGNGRKSEPGTGRRSKRGKKGGKPEEAPAA----VPV 820

Query: 852 AKVPDHTPGEHPMFKAMAAANGK 874
            KVP H  GEHPMFKAMAAANG+
Sbjct: 821 IKVPPHPAGEHPMFKAMAAANGR 843



 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 5/72 (6%)

Query: 1  MAEDAHTE-----DLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAH 55
          MA+  +T+     D S +   +E LPERLRVHSLARVLGTTSRRVLDALAE DGR RSAH
Sbjct: 1  MADSENTQAQDSPDSSEEASPRERLPERLRVHSLARVLGTTSRRVLDALAELDGRARSAH 60

Query: 56 STVDKADAERVR 67
          STVDK +AERVR
Sbjct: 61 STVDKTEAERVR 72



 Score = 52.0 bits (123), Expect = 5e-04
 Identities = 28/42 (66%), Positives = 29/42 (69%), Gaps = 8/42 (19%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFEPA 195
           DEPESR ILE A +        ER DYLPLFVAPQPV FEPA
Sbjct: 130 DEPESRTILETAPV--------ERADYLPLFVAPQPVRFEPA 163


>tr|A3Q2F6|A3Q2F6_MYCSJ Tax_Id=164757 SubName: Full=Ribonuclease,
           Rne/Rng family;[Mycobacterium sp.]
          Length = 987

 Score =  847 bits (2189), Expect = 0.0
 Identities = 453/563 (80%), Positives = 466/563 (82%), Gaps = 9/563 (1%)

Query: 317 NTVVHERAPRTE--RSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFL 374
           NTVVHER PR    +S  SDD+EIQGISGSTRLEAK              PPILSEAEFL
Sbjct: 285 NTVVHERPPRERGGKSGDSDDNEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFL 344

Query: 375 ARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIV 434
           ARREAVER M+VRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTS ASASLVGNIYLGIV
Sbjct: 345 ARREAVERVMVVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSPASASLVGNIYLGIV 404

Query: 435 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 494
           QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV
Sbjct: 405 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 464

Query: 495 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTA 554
           GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVP+DAGVIIRTA
Sbjct: 465 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPADAGVIIRTA 524

Query: 555 SEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDF 614
           SEGVKE+DIRSDV RLQ+RW++I                 LYEEPDVLVKVIRDLFNEDF
Sbjct: 525 SEGVKEDDIRSDVNRLQERWTQIEAKAAEITAKKAGAAVALYEEPDVLVKVIRDLFNEDF 584

Query: 615 SSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAG---PDAPDVFAVHRIDEQLAKAMD 671
           S LIVSGDEAWNTINSYVE+VAPDLMPRLTKYEPAG    + PDVFAVHRIDEQLAKAMD
Sbjct: 585 SGLIVSGDEAWNTINSYVESVAPDLMPRLTKYEPAGNPNGEGPDVFAVHRIDEQLAKAMD 644

Query: 672 RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXX 731
           RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLR  
Sbjct: 645 RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDI 704

Query: 732 XXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEA 791
                     MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGL+EA
Sbjct: 705 GGIIVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEA 764

Query: 792 FSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVHV 851
           FST C HC GRGIVLHGDPID+AS N                         AA    V V
Sbjct: 765 FSTPCPHCAGRGIVLHGDPIDNASGNGRKSEPGTGRRSKRGKKGGKPEEAPAA----VPV 820

Query: 852 AKVPDHTPGEHPMFKAMAAANGK 874
            KVP H  GEHPMFKAMAAANG+
Sbjct: 821 IKVPPHPAGEHPMFKAMAAANGR 843



 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 5/72 (6%)

Query: 1  MAEDAHTE-----DLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAH 55
          MA+  +T+     D S +   +E LPERLRVHSLARVLGTTSRRVLDALAE DGR RSAH
Sbjct: 1  MADSENTQAQDSPDSSEEASPRERLPERLRVHSLARVLGTTSRRVLDALAELDGRARSAH 60

Query: 56 STVDKADAERVR 67
          STVDK +AERVR
Sbjct: 61 STVDKTEAERVR 72



 Score = 52.0 bits (123), Expect = 5e-04
 Identities = 28/42 (66%), Positives = 29/42 (69%), Gaps = 8/42 (19%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFEPA 195
           DEPESR ILE A +        ER DYLPLFVAPQPV FEPA
Sbjct: 130 DEPESRTILETAPV--------ERADYLPLFVAPQPVRFEPA 163


>tr|A1UJ10|A1UJ10_MYCSK Tax_Id=189918 SubName: Full=Ribonuclease,
           Rne/Rng family;[Mycobacterium sp.]
          Length = 991

 Score =  847 bits (2189), Expect = 0.0
 Identities = 453/563 (80%), Positives = 466/563 (82%), Gaps = 9/563 (1%)

Query: 317 NTVVHERAPRTE--RSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFL 374
           NTVVHER PR    +S  SDD+EIQGISGSTRLEAK              PPILSEAEFL
Sbjct: 285 NTVVHERPPRERGGKSGDSDDNEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFL 344

Query: 375 ARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIV 434
           ARREAVER M+VRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTS ASASLVGNIYLGIV
Sbjct: 345 ARREAVERVMVVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSPASASLVGNIYLGIV 404

Query: 435 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 494
           QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV
Sbjct: 405 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 464

Query: 495 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTA 554
           GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVP+DAGVIIRTA
Sbjct: 465 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPADAGVIIRTA 524

Query: 555 SEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDF 614
           SEGVKE+DIRSDV RLQ+RW++I                 LYEEPDVLVKVIRDLFNEDF
Sbjct: 525 SEGVKEDDIRSDVNRLQERWTQIEAKAAEITAKKAGAAVALYEEPDVLVKVIRDLFNEDF 584

Query: 615 SSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAG---PDAPDVFAVHRIDEQLAKAMD 671
           S LIVSGDEAWNTINSYVE+VAPDLMPRLTKYEPAG    + PDVFAVHRIDEQLAKAMD
Sbjct: 585 SGLIVSGDEAWNTINSYVESVAPDLMPRLTKYEPAGNPNGEGPDVFAVHRIDEQLAKAMD 644

Query: 672 RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXX 731
           RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLR  
Sbjct: 645 RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDI 704

Query: 732 XXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEA 791
                     MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGL+EA
Sbjct: 705 GGIIVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEA 764

Query: 792 FSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVHV 851
           FST C HC GRGIVLHGDPID+AS N                         AA    V V
Sbjct: 765 FSTPCPHCAGRGIVLHGDPIDNASGNGRKSEPGTGRRSKRGKKGGKPEEAPAA----VPV 820

Query: 852 AKVPDHTPGEHPMFKAMAAANGK 874
            KVP H  GEHPMFKAMAAANG+
Sbjct: 821 IKVPPHPAGEHPMFKAMAAANGR 843



 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 5/72 (6%)

Query: 1  MAEDAHTE-----DLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAH 55
          MA+  +T+     D S +   +E LPERLRVHSLARVLGTTSRRVLDALAE DGR RSAH
Sbjct: 1  MADSENTQAQDSPDSSEEASPRERLPERLRVHSLARVLGTTSRRVLDALAELDGRARSAH 60

Query: 56 STVDKADAERVR 67
          STVDK +AERVR
Sbjct: 61 STVDKTEAERVR 72



 Score = 52.0 bits (123), Expect = 5e-04
 Identities = 28/42 (66%), Positives = 29/42 (69%), Gaps = 8/42 (19%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFEPA 195
           DEPESR ILE A +        ER DYLPLFVAPQPV FEPA
Sbjct: 130 DEPESRTILETAPV--------ERADYLPLFVAPQPVRFEPA 163


>tr|A1TC24|A1TC24_MYCVP Tax_Id=350058 SubName: Full=Ribonuclease,
           Rne/Rng family;[Mycobacterium vanbaalenii]
          Length = 961

 Score =  845 bits (2184), Expect = 0.0
 Identities = 448/561 (79%), Positives = 464/561 (82%), Gaps = 9/561 (1%)

Query: 317 NTVVHERAPR--TERSDK-SDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEF 373
           NTVVHER PR    R DK S DSEIQGISGSTRLEAK              PPILSEAEF
Sbjct: 277 NTVVHEREPRKSANRGDKTSSDSEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEF 336

Query: 374 LARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGI 433
           LARREAVER M++RDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGI
Sbjct: 337 LARREAVERMMVIRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGI 396

Query: 434 VQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDP 493
           VQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG  RKIEQALKPGDYVVVQVSKDP
Sbjct: 397 VQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDP 456

Query: 494 VGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRT 553
           VGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRT
Sbjct: 457 VGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRT 516

Query: 554 ASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNED 613
           ASEGVKEEDIRSDVERLQKRW+EI                 LYEEPDVLVKVIRDLFNED
Sbjct: 517 ASEGVKEEDIRSDVERLQKRWTEIEAKAAEITEKKAGAAVALYEEPDVLVKVIRDLFNED 576

Query: 614 FSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRK 673
           F+ L VSGD AW TIN YV AVAP+L+PR+T+YEPA PDAPDVFAVHRIDEQLAKAMDRK
Sbjct: 577 FTGLTVSGDHAWKTINDYVTAVAPELLPRMTQYEPASPDAPDVFAVHRIDEQLAKAMDRK 636

Query: 674 VWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXX 733
           VWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLR    
Sbjct: 637 VWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGG 696

Query: 734 XXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFS 793
                   MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRK+LGTGL+EAFS
Sbjct: 697 IVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFS 756

Query: 794 TACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVHVAK 853
           T C+HC GRGI+LHGDP+DS +                           A   +EV V K
Sbjct: 757 TTCSHCAGRGIMLHGDPVDSMA------PANGRKSEPGTGRRSKRGKRGARAEQEVPVVK 810

Query: 854 VPDHTPGEHPMFKAMAAANGK 874
           VP H+PGEHPMFKAMAAANGK
Sbjct: 811 VPSHSPGEHPMFKAMAAANGK 831



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 37/47 (78%), Positives = 42/47 (89%)

Query: 21 PERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          PERLRVHSLARVLGTTSRR++DAL E DGR RSAHSTV + +A+RVR
Sbjct: 34 PERLRVHSLARVLGTTSRRIIDALVELDGRTRSAHSTVGREEADRVR 80



 Score = 45.4 bits (106), Expect = 0.044
 Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 5/40 (12%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFE 193
           DEPESRLILE    P +     E  DYLPLFVAPQPV F+
Sbjct: 120 DEPESRLILETPVAPVS-----EPADYLPLFVAPQPVRFD 154


>tr|A4T2J1|A4T2J1_MYCGI Tax_Id=350054 SubName: Full=Ribonuclease,
           Rne/Rng family;[Mycobacterium gilvum]
          Length = 1016

 Score =  829 bits (2142), Expect = 0.0
 Identities = 444/568 (78%), Positives = 464/568 (81%), Gaps = 10/568 (1%)

Query: 317 NTVVHERAPRTE-RSDKSDDS-EIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFL 374
           NTVVHER PR   R+DK D S EIQGISGSTRLEAK              PPILSEAEFL
Sbjct: 301 NTVVHEREPRKSGRADKGDKSDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFL 360

Query: 375 ARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIV 434
           ARREAVERTM+VRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAA  SLVGNIYLGIV
Sbjct: 361 ARREAVERTMVVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAAQVSLVGNIYLGIV 420

Query: 435 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 494
           QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG  RKIEQALKPGDYVVVQVSKDPV
Sbjct: 421 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPV 480

Query: 495 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTA 554
           GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPS+AGVIIRTA
Sbjct: 481 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSNAGVIIRTA 540

Query: 555 SEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDF 614
           SEGVKE+DIR+DVERLQKRW++I                 LYEEPDVLVKVIRDLFNEDF
Sbjct: 541 SEGVKEDDIRTDVERLQKRWTDIEAKAAEVTAKKAGAAVALYEEPDVLVKVIRDLFNEDF 600

Query: 615 SSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGP----DAPDVFAVHRIDEQLAKAM 670
           S+LIVSGD+AW TI+ YV AVAP+L+PR+T+YEPAG      APDVFAVHRIDEQLAKAM
Sbjct: 601 SNLIVSGDQAWKTIDDYVTAVAPELLPRITRYEPAGSPEAGTAPDVFAVHRIDEQLAKAM 660

Query: 671 DRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRX 730
           DRKV+LPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEE VRQLRLR 
Sbjct: 661 DRKVYLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEETVRQLRLRD 720

Query: 731 XXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVE 790
                      MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGL+E
Sbjct: 721 IGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLIE 780

Query: 791 AFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAAR----T 846
           AFST CTHC GRGI+LHGDP+DS+S +                           R     
Sbjct: 781 AFSTTCTHCSGRGIMLHGDPVDSSSGSNGRKADSGGGGNGGGGGGGGRRSRRGKRGAKPE 840

Query: 847 EEVHVAKVPDHTPGEHPMFKAMAAANGK 874
            EV V KVP H PGEHPMFKAMAAANGK
Sbjct: 841 PEVQVTKVPAHLPGEHPMFKAMAAANGK 868



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 40/58 (68%), Positives = 47/58 (81%), Gaps = 3/58 (5%)

Query: 13 QTPQQ-EGLP--ERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          +TP Q +  P  E+LRVHSLARVLGTTSRR++DALAE DGR RSAHSTV   +A+RVR
Sbjct: 23 ETPSQAKSAPASEKLRVHSLARVLGTTSRRIIDALAELDGRARSAHSTVGPDEADRVR 80



 Score = 47.8 bits (112), Expect = 0.009
 Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 4/40 (10%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFE 193
           +EPESRLILE     P+  +  E  DYLPLFVAPQPV FE
Sbjct: 138 EEPESRLILE----TPSAPSTAEPADYLPLFVAPQPVRFE 173


>tr|D5PH73|D5PH73_9MYCO Tax_Id=525368 (rne)SubName:
           Full=Ribonuclease E;[Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 945

 Score =  815 bits (2104), Expect = 0.0
 Identities = 433/563 (76%), Positives = 462/563 (82%), Gaps = 19/563 (3%)

Query: 317 NTVVHERAPRTERS-----DKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEA 371
           NTVVHERAPR  ++     + S ++EI+GI GSTRLEAK              PP+L+EA
Sbjct: 255 NTVVHERAPRGGKNGGDGGNGSSNAEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLTEA 314

Query: 372 EFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYL 431
           EFLARREAVER M+VRD+VRTEPPH+GARYTQIAVLEDG+VVEHFVTSAASASLVGNIYL
Sbjct: 315 EFLARREAVERVMVVRDRVRTEPPHQGARYTQIAVLEDGIVVEHFVTSAASASLVGNIYL 374

Query: 432 GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSK 491
           GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGDYVVVQVSK
Sbjct: 375 GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGSDRKIEQALKPGDYVVVQVSK 434

Query: 492 DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII 551
           DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII
Sbjct: 435 DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII 494

Query: 552 RTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFN 611
           RTASEGVKE+DIR DV RLQ+RW +I                 LYEEPDVLVKVIRDLFN
Sbjct: 495 RTASEGVKEDDIRGDVTRLQERWRQIEAKATEITEKAAGAAVALYEEPDVLVKVIRDLFN 554

Query: 612 EDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYE-PAGPD---APDVFAVHRIDEQLA 667
           EDF+ LIVSGDEAW TI  YV +VAPDL+P+L+KYE P+GP+    PDVFAVHRIDEQLA
Sbjct: 555 EDFAGLIVSGDEAWTTITDYVNSVAPDLVPKLSKYEPPSGPEGQAGPDVFAVHRIDEQLA 614

Query: 668 KAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLR 727
           KAM+RKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVT+NNLEAAEEIVRQLR
Sbjct: 615 KAMERKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQLR 674

Query: 728 LRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG 787
           LR            MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG
Sbjct: 675 LRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG 734

Query: 788 LVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTE 847
           L+EAFST+CTHCGGRGIVLH DP+DSA SN                           R E
Sbjct: 735 LIEAFSTSCTHCGGRGIVLHTDPVDSAPSNGRKSESGGRRGRRSKKN----------RAE 784

Query: 848 EVHVAKVPDHTPGEHPMFKAMAA 870
           E  VAKVP H+PGEHPMFKAMAA
Sbjct: 785 EPVVAKVPAHSPGEHPMFKAMAA 807



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 41/67 (61%), Positives = 51/67 (76%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M + A + + S +  + + LP+RLRVHSLAR LGTTS+RVLDAL+  DGR RSAHSTVD+
Sbjct: 1  MVDGAPSAESSEEPTRHDELPDRLRVHSLARTLGTTSKRVLDALSALDGRIRSAHSTVDR 60

Query: 61 ADAERVR 67
           DA RVR
Sbjct: 61 DDAVRVR 67



 Score = 43.1 bits (100), Expect = 0.22
 Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 9/45 (20%)

Query: 149 AVLVGDEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFE 193
           A    +EPESRL+LE A          ERP Y+PLFVAPQP+  E
Sbjct: 86  AQAAAEEPESRLMLETAG---------ERPHYMPLFVAPQPIEAE 121


>tr|Q73XP2|Q73XP2_MYCPA Tax_Id=1770 (rne)SubName:
           Full=Rne;[Mycobacterium paratuberculosis]
          Length = 946

 Score =  812 bits (2098), Expect = 0.0
 Identities = 430/565 (76%), Positives = 461/565 (81%), Gaps = 20/565 (3%)

Query: 317 NTVVHERAPRTERSDKSD-----DSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEA 371
           NTVVHER PR  ++   D      SEI+GI GSTRLEAK              PP+L+EA
Sbjct: 254 NTVVHERPPRNGKNGGDDGNGSSSSEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLTEA 313

Query: 372 EFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYL 431
           EFLARREAVER M+VRD++RTEPPH+G+RYTQIAVLEDG+VVEHFVTSAASASLVGNIYL
Sbjct: 314 EFLARREAVERVMVVRDRIRTEPPHQGSRYTQIAVLEDGIVVEHFVTSAASASLVGNIYL 373

Query: 432 GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSK 491
           GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGDYVVVQVSK
Sbjct: 374 GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGSDRKIEQALKPGDYVVVQVSK 433

Query: 492 DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII 551
           DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII
Sbjct: 434 DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII 493

Query: 552 RTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFN 611
           RTASEGVKE+DIR DV RLQ+RW +I                 LYEEPDVLVKVIRDLFN
Sbjct: 494 RTASEGVKEDDIRGDVTRLQERWKQIEAKAIEIKEKAAGAAVALYEEPDVLVKVIRDLFN 553

Query: 612 EDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQLA 667
           EDF+ LIVSGD+AWNTIN YV +VAPDL+ ++TKYEPA GPD    PDVFAVHRIDEQLA
Sbjct: 554 EDFAGLIVSGDDAWNTINEYVNSVAPDLVSKVTKYEPATGPDGTPGPDVFAVHRIDEQLA 613

Query: 668 KAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLR 727
           KAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTGSGGNLEQTVT+NNLEAAEEIVRQLR
Sbjct: 614 KAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQLR 673

Query: 728 LRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG 787
           LR            MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG
Sbjct: 674 LRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG 733

Query: 788 LVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTE 847
           LVEAFST+C +CGGRGI+LH DP+DSA SN                          ++ E
Sbjct: 734 LVEAFSTSCPNCGGRGILLHADPVDSAPSN-----------GRKSESGGRRGRRKKSKAE 782

Query: 848 EVHVAKVPDHTPGEHPMFKAMAAAN 872
           E  VAKVP H+PGEHPMFKAMAA +
Sbjct: 783 EPVVAKVPVHSPGEHPMFKAMAAGS 807



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 44/67 (65%), Positives = 52/67 (77%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M + A T D S ++ +   LP+RLRVHSLAR LGTTS+RVLDAL+E DGR RSAHSTVD+
Sbjct: 1  MVDGAPTADPSEESTRSGDLPDRLRVHSLARTLGTTSKRVLDALSELDGRVRSAHSTVDR 60

Query: 61 ADAERVR 67
           DA RVR
Sbjct: 61 EDAVRVR 67



 Score = 42.4 bits (98), Expect = 0.37
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 7/39 (17%)

Query: 152 VGDEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +  EPESRL+LE    P A    TERP Y+PLFVAPQP+
Sbjct: 94  IAGEPESRLLLE---TPDA----TERPHYMPLFVAPQPL 125


>tr|A0QDG7|A0QDG7_MYCA1 Tax_Id=243243 SubName: Full=Rne
           protein;[Mycobacterium avium]
          Length = 949

 Score =  812 bits (2098), Expect = 0.0
 Identities = 430/565 (76%), Positives = 461/565 (81%), Gaps = 20/565 (3%)

Query: 317 NTVVHERAPRTERSDKSD-----DSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEA 371
           NTVVHER PR  ++   D      SEI+GI GSTRLEAK              PP+L+EA
Sbjct: 254 NTVVHERPPRNGKNGGDDGNGSSSSEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLTEA 313

Query: 372 EFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYL 431
           EFLARREAVER M+VRD++RTEPPH+G+RYTQIAVLEDG+VVEHFVTSAASASLVGNIYL
Sbjct: 314 EFLARREAVERVMVVRDRIRTEPPHQGSRYTQIAVLEDGIVVEHFVTSAASASLVGNIYL 373

Query: 432 GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSK 491
           GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGDYVVVQVSK
Sbjct: 374 GIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGSDRKIEQALKPGDYVVVQVSK 433

Query: 492 DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII 551
           DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII
Sbjct: 434 DPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVII 493

Query: 552 RTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFN 611
           RTASEGVKE+DIR DV RLQ+RW +I                 LYEEPDVLVKVIRDLFN
Sbjct: 494 RTASEGVKEDDIRGDVTRLQERWKQIEAKAIEIKEKAAGAAVALYEEPDVLVKVIRDLFN 553

Query: 612 EDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQLA 667
           EDF+ LIVSGD+AWNTIN YV +VAPDL+ ++TKYEPA GPD    PDVFAVHRIDEQLA
Sbjct: 554 EDFAGLIVSGDDAWNTINEYVNSVAPDLVSKVTKYEPATGPDGTPGPDVFAVHRIDEQLA 613

Query: 668 KAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLR 727
           KAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTGSGGNLEQTVT+NNLEAAEEIVRQLR
Sbjct: 614 KAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQLR 673

Query: 728 LRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG 787
           LR            MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG
Sbjct: 674 LRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG 733

Query: 788 LVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTE 847
           LVEAFST+C +CGGRGI+LH DP+DSA SN                          ++ E
Sbjct: 734 LVEAFSTSCPNCGGRGILLHADPVDSAPSN-----------GRKSESGGRRGRRKKSKAE 782

Query: 848 EVHVAKVPDHTPGEHPMFKAMAAAN 872
           E  VAKVP H+PGEHPMFKAMAA +
Sbjct: 783 EPVVAKVPVHSPGEHPMFKAMAAGS 807



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 44/67 (65%), Positives = 52/67 (77%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M + A T D S ++ +   LP+RLRVHSLAR LGTTS+RVLDAL+E DGR RSAHSTVD+
Sbjct: 1  MVDGAPTADPSEESTRSGDLPDRLRVHSLARTLGTTSKRVLDALSELDGRVRSAHSTVDR 60

Query: 61 ADAERVR 67
           DA RVR
Sbjct: 61 EDAVRVR 67



 Score = 41.6 bits (96), Expect = 0.64
 Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 7/36 (19%)

Query: 155 EPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           EPESRL+LE    P A    TERP Y+PLFVAPQP+
Sbjct: 97  EPESRLLLE---TPDA----TERPHYMPLFVAPQPL 125


>tr|B2HMG4|B2HMG4_MYCMM Tax_Id=216594 (rne)SubName:
           Full=Ribonuclease E Rne;[Mycobacterium marinum]
          Length = 1017

 Score =  805 bits (2080), Expect = 0.0
 Identities = 428/567 (75%), Positives = 460/567 (81%), Gaps = 17/567 (2%)

Query: 317 NTVVHERAPRTE----RSDKSDDS---EIQGISGSTRLEAKXXXXXXXXXXXXXXPPILS 369
           NTVVHERAPR+      SD  DDS   EI+GI GSTRLEAK              PP+LS
Sbjct: 270 NTVVHERAPRSGGKSGNSDSGDDSGGNEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLS 329

Query: 370 EAEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNI 429
           EAEFLARREAVER M+VRD+VRTEPPH G+RYTQIAVLEDG+VVEHFVTSAASASLVGNI
Sbjct: 330 EAEFLARREAVERVMVVRDRVRTEPPHPGSRYTQIAVLEDGIVVEHFVTSAASASLVGNI 389

Query: 430 YLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQV 489
           YLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDY+VVQV
Sbjct: 390 YLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYIVVQV 449

Query: 490 SKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGV 549
           SKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGV
Sbjct: 450 SKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGV 509

Query: 550 IIRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDL 609
           IIRTASEGVKE+DIR+DV RLQ+RW++I                 LYEEPDVLVKVIRDL
Sbjct: 510 IIRTASEGVKEDDIRADVTRLQERWNQIEAKAVEIKQKAAGAAVALYEEPDVLVKVIRDL 569

Query: 610 FNEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA----GPDAPDVFAVHRIDEQ 665
           FNEDF+ L+VSGD+AW+TIN YV +VAPDL+ +L+KYEPA    G   PDVFAVHRIDEQ
Sbjct: 570 FNEDFAGLVVSGDDAWDTINEYVSSVAPDLVSKLSKYEPAVGSEGQVGPDVFAVHRIDEQ 629

Query: 666 LAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQ 725
           LAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVT+NNLEAAEEIVRQ
Sbjct: 630 LAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQ 689

Query: 726 LRLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLG 785
           LRLR            MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLG
Sbjct: 690 LRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLG 749

Query: 786 TGLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAAR 845
           TGLVEAFST+C HC GRGI+LH DP+DSA +                             
Sbjct: 750 TGLVEAFSTSCPHCSGRGILLHADPVDSAPTTGRKADSGGRRNRRSKKNRAEEP------ 803

Query: 846 TEEVHVAKVPDHTPGEHPMFKAMAAAN 872
           +E+  VAKVP H PGEHPMFKAMAA++
Sbjct: 804 SEKEAVAKVPTHAPGEHPMFKAMAASS 830



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 42/67 (62%), Positives = 51/67 (76%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M + A + D   +  Q+E LP+RLRVHSLAR LGT+SRRVLDAL+  DGR RSAHS+VD+
Sbjct: 1  MVDGAPSSDPENEPTQREDLPDRLRVHSLARTLGTSSRRVLDALSALDGRIRSAHSSVDR 60

Query: 61 ADAERVR 67
           DA RVR
Sbjct: 61 VDAVRVR 67



 Score = 50.8 bits (120), Expect = 0.001
 Identities = 24/38 (63%), Positives = 27/38 (71%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPVS 191
           DEPESRL+LE        ET  ERP Y+PLFVAPQP+S
Sbjct: 105 DEPESRLMLETQETVQVVETWVERPHYMPLFVAPQPIS 142


>tr|A0PU18|A0PU18_MYCUA Tax_Id=362242 (rne)SubName:
           Full=Ribonuclease E Rne;[Mycobacterium ulcerans]
          Length = 988

 Score =  798 bits (2060), Expect = 0.0
 Identities = 424/567 (74%), Positives = 458/567 (80%), Gaps = 17/567 (2%)

Query: 317 NTVVHERAPRTE----RSDKSDDS---EIQGISGSTRLEAKXXXXXXXXXXXXXXPPILS 369
           NTVVHERAPR+      SD  DDS   EI+GI GSTRLEAK              PP+LS
Sbjct: 267 NTVVHERAPRSGDKSGNSDSGDDSGGNEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLS 326

Query: 370 EAEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNI 429
           EAEFLARREAVER M+VRD+VRTEPPH G+RYTQIAVLEDG+VVEHFVTSAASASLVGNI
Sbjct: 327 EAEFLARREAVERVMVVRDRVRTEPPHPGSRYTQIAVLEDGIVVEHFVTSAASASLVGNI 386

Query: 430 YLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQV 489
           YLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDY+VVQV
Sbjct: 387 YLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYIVVQV 446

Query: 490 SKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGV 549
           SKDPVGHKGARLTTQVSLAGRYLVYV GASSTGISRKLPDTERQRLKEILREVVPSDAGV
Sbjct: 447 SKDPVGHKGARLTTQVSLAGRYLVYVAGASSTGISRKLPDTERQRLKEILREVVPSDAGV 506

Query: 550 IIRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDL 609
           IIRTASEGVKE+DIR+DV RLQ+RW++I                 LYEEPDVLVKVIRDL
Sbjct: 507 IIRTASEGVKEDDIRADVTRLQERWNQIEAKAVEIKQKAAGAAVALYEEPDVLVKVIRDL 566

Query: 610 FNEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA----GPDAPDVFAVHRIDEQ 665
           FNEDF+ L+VSGD+AW+TIN YV +VAPDL+ +L+KYEPA    G   PDVFAVHRIDE 
Sbjct: 567 FNEDFAGLVVSGDDAWDTINEYVSSVAPDLVSKLSKYEPAVGSEGQVGPDVFAVHRIDEH 626

Query: 666 LAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQ 725
           LAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVT+NNLEAAEEIVRQ
Sbjct: 627 LAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQ 686

Query: 726 LRLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLG 785
           LRLR            MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLG
Sbjct: 687 LRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLG 746

Query: 786 TGLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAAR 845
           TGL+EAFST+C HC GRGI+LH DP+DSA +                             
Sbjct: 747 TGLIEAFSTSCPHCSGRGILLHADPVDSAPTTGRKADSGGRRNRRSKKNRAEEP------ 800

Query: 846 TEEVHVAKVPDHTPGEHPMFKAMAAAN 872
           +E+  VAKVP + PGEHPMFKAMAA++
Sbjct: 801 SEKEAVAKVPTYAPGEHPMFKAMAASS 827



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 42/67 (62%), Positives = 51/67 (76%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M + A + D   +  Q+E LP+RLRVHSLAR LGT+SRRVLDAL+  DGR RSAHS+VD+
Sbjct: 1  MVDGAPSSDPENEPTQREDLPDRLRVHSLARTLGTSSRRVLDALSALDGRIRSAHSSVDR 60

Query: 61 ADAERVR 67
           DA RVR
Sbjct: 61 VDAVRVR 67



 Score = 48.5 bits (114), Expect = 0.005
 Identities = 23/37 (62%), Positives = 26/37 (70%)

Query: 155 EPESRLILEHANIPPARETQTERPDYLPLFVAPQPVS 191
           EPESRL+LE        ET  ERP Y+PLFVAPQP+S
Sbjct: 103 EPESRLMLETQETVQVVETWVERPHYMPLFVAPQPIS 139


>tr|B1MMY0|B1MMY0_MYCA9 Tax_Id=561007 SubName: Full=Possible
           ribonuclease E Rne;[Mycobacterium abscessus]
          Length = 959

 Score =  790 bits (2040), Expect = 0.0
 Identities = 412/557 (73%), Positives = 451/557 (80%), Gaps = 15/557 (2%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR ER D     EIQGISGSTRLEAK              PPIL+EAEFLAR
Sbjct: 304 NTVVHERKPRAERGD-----EIQGISGSTRLEAKRQRRRDGRDAGRRRPPILTEAEFLAR 358

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAV+R M+VRDK R+EPPHEGARYTQIAVLEDGV+VEHFVTSAASASLVGNIYLG+VQN
Sbjct: 359 REAVDRVMVVRDKTRSEPPHEGARYTQIAVLEDGVLVEHFVTSAASASLVGNIYLGVVQN 418

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG NRKIEQALK GDYV+VQVSKDPVGH
Sbjct: 419 VLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGSNRKIEQALKSGDYVLVQVSKDPVGH 478

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SLAGRYLVYVPGASSTGISRKLPDTERQRLKEILR++VP+DAGVIIRTASE
Sbjct: 479 KGARLTTQISLAGRYLVYVPGASSTGISRKLPDTERQRLKEILRDIVPADAGVIIRTASE 538

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GV+EEDIR+DV+RLQ++W  I                 LYEEPDVLVKV+RDLFNEDFS 
Sbjct: 539 GVREEDIRADVQRLQEQWQGIEQSATDLTSKASGAAVALYEEPDVLVKVVRDLFNEDFSK 598

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           LI+ GD AW+TI+ YV+ VAPDL+ R+ +YE    + PDVFAVHRIDEQLAKA+DRKVWL
Sbjct: 599 LIIEGDAAWDTIDDYVKTVAPDLLSRIERYESG--EGPDVFAVHRIDEQLAKALDRKVWL 656

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGGTLVIDRTEAMTVVDVNTGKFTG+GGNLE+TVTRNNLEAAEEIVRQLRLR       
Sbjct: 657 PSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQLRLRDVGGIVV 716

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTEAL RDRTRHQVSEVTSLGLVQLTRK+LGTGL+EAFS+ C
Sbjct: 717 IDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSSTC 776

Query: 797 THCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVHVAKVPD 856
           THC GRGIVLH DP+D+AS+                            +T++V VA+ P 
Sbjct: 777 THCAGRGIVLHVDPVDNASN--------ASSPAKKAETGRRAKRSRKGKTDDVVVARTPS 828

Query: 857 HTPGEHPMFKAMAAANG 873
           H  GEHPMFKAMAAANG
Sbjct: 829 HPQGEHPMFKAMAAANG 845



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 40/63 (63%), Positives = 46/63 (73%)

Query: 5  AHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAE 64
          A T D      +Q  LPE+LRVHSLARVLGT++RRVLDAL+  DGR RS HS VDK DA 
Sbjct: 21 ALTPDTPPAPAEQGELPEKLRVHSLARVLGTSTRRVLDALSNLDGRARSPHSNVDKQDAA 80

Query: 65 RVR 67
          +VR
Sbjct: 81 KVR 83


>tr|Q7TYK3|Q7TYK3_MYCBO Tax_Id=1765 (rne)SubName: Full=POSSIBLE
           RIBONUCLEASE E RNE; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|P71905|P71905_MYCTU Tax_Id=1773 (rne)SubName: Full=POSSIBLE
           RIBONUCLEASE E RNE; EC=3.1.-.-;[Mycobacterium
           tuberculosis]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|C6DN37|C6DN37_MYCTK Tax_Id=478434 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|C1AER1|C1AER1_MYCBT Tax_Id=561275 (rne)SubName: Full=Putative
           ribonuclease E;[Mycobacterium bovis]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|A5WQ59|A5WQ59_MYCTF Tax_Id=336982 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|A5U5E0|A5U5E0_MYCTA Tax_Id=419947 (rne)SubName: Full=Putative
           cytoplasmic axial filament protein;[Mycobacterium
           tuberculosis]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|A1KLE0|A1KLE0_MYCBP Tax_Id=410289 (rne)SubName: Full=Possible
           ribonuclease E rne; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D6G4L6|D6G4L6_MYCTU Tax_Id=478435 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis KZN 605]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D6FY42|D6FY42_MYCTU Tax_Id=611304 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis K85]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D6FJ06|D6FJ06_MYCTU Tax_Id=611303 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis CPHL_A]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D6F6P4|D6F6P4_MYCTU Tax_Id=611302 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis T46]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D5ZH30|D5ZH30_MYCTU Tax_Id=537210 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis T17]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D5YU61|D5YU61_MYCTU Tax_Id=515616 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis 02_1987]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D5YHS4|D5YHS4_MYCTU Tax_Id=520140 SubName: Full=Ribonuclease
           E;[Mycobacterium tuberculosis EAS054]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D5Y534|D5Y534_MYCTU Tax_Id=520141 SubName: Full=Ribonuclease
           E;[Mycobacterium tuberculosis T85]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|D5XVM1|D5XVM1_MYCTU Tax_Id=515617 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis T92]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|A4KJJ5|A4KJJ5_MYCTU Tax_Id=395095 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis str. Haarlem]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|A2VKG7|A2VKG7_MYCTU Tax_Id=348776 SubName: Full=Ribonuclease E
           rne;[Mycobacterium tuberculosis C]
          Length = 953

 Score =  787 bits (2032), Expect = 0.0
 Identities = 423/568 (74%), Positives = 457/568 (80%), Gaps = 24/568 (4%)

Query: 317 NTVVHERAPRT-ERSDKSDD-----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSE 370
           NTVVHER PR  +++  S D     +EI+GI GSTRLEAK              PP+LSE
Sbjct: 260 NTVVHERVPRAGDKAGNSQDGGSGSTEIKGIDGSTRLEAKRQRRRDGRDAGRRRPPVLSE 319

Query: 371 AEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIY 430
           AEFLARREAVER M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIY
Sbjct: 320 AEFLARREAVERVMVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIY 379

Query: 431 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVS 490
           LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVS
Sbjct: 380 LGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVS 439

Query: 491 KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 550
           KDPVGHKGARLTTQVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI
Sbjct: 440 KDPVGHKGARLTTQVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVI 499

Query: 551 IRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLF 610
           IRTASEGVKE+DIR+DV RL++RW +I                 LYEEPDVLVKVIRDLF
Sbjct: 500 IRTASEGVKEDDIRADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLF 559

Query: 611 NEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQL 666
           NEDF  LIVSGDEAWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQL
Sbjct: 560 NEDFVGLIVSGDEAWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQL 619

Query: 667 AKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQL 726
           AKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQL
Sbjct: 620 AKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQL 679

Query: 727 RLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGT 786
           RLR            MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGT
Sbjct: 680 RLRDIGGIVVIDFIDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGT 739

Query: 787 GLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAART 846
           GL+EAFST+C +C GRGI+LH DP+DSA++                           +R+
Sbjct: 740 GLIEAFSTSCPNCSGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRS 789

Query: 847 EEVH----VAKVPDHTPGEHPMFKAMAA 870
           EE      VAKVP H PGEHPMFKAMAA
Sbjct: 790 EESSDRSMVAKVPVHAPGEHPMFKAMAA 817



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 16 QQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERVR 67
          Q E LP+RLRVHSLAR LGTTSRRVLDAL   DGR RSAHSTVD+ DA RVR
Sbjct: 15 QHEELPDRLRVHSLARTLGTTSRRVLDALTALDGRVRSAHSTVDRVDAVRVR 66



 Score = 43.9 bits (102), Expect = 0.13
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 154 DEPESRLILEHANIPPARETQTERPDYLPLFVAPQPV 190
           +EPESRL+LE       R    ERP Y+PLFVAPQP+
Sbjct: 90  EEPESRLMLETQE---TRNADVERPHYMPLFVAPQPI 123


>tr|Q9CBZ1|Q9CBZ1_MYCLE Tax_Id=1769 SubName: Full=Possible
           ribonuclease;[Mycobacterium leprae]
          Length = 924

 Score =  778 bits (2010), Expect = 0.0
 Identities = 416/568 (73%), Positives = 446/568 (78%), Gaps = 22/568 (3%)

Query: 317 NTVVHERAPRTERSDKSDDS--------EIQGISGSTRLEAKXXXXXXXXXXXXXXPPIL 368
           NTVVHER PR      S D+        +I+GI GSTRLEAK                +L
Sbjct: 240 NTVVHERTPRAAGRSASFDNGVNGTGSADIKGIDGSTRLEAKRQRRRDGRDAGRRRSSVL 299

Query: 369 SEAEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGN 428
           SEAEFLARRE+VER M+VRD++RTEPPH GARYTQIAVLEDG+VVEHFVTSAASASLVGN
Sbjct: 300 SEAEFLARRESVERVMVVRDRIRTEPPHPGARYTQIAVLEDGIVVEHFVTSAASASLVGN 359

Query: 429 IYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQ 488
           IYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGDY+VVQ
Sbjct: 360 IYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGADRKIEQALKPGDYIVVQ 419

Query: 489 VSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAG 548
           V+KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVP DAG
Sbjct: 420 VNKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPPDAG 479

Query: 549 VIIRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRD 608
           VIIRTASEGVKEEDIR DV RLQ+ W +I                 LYEEPDVLVKVIRD
Sbjct: 480 VIIRTASEGVKEEDIRKDVTRLQEHWEQIEAKTIQTKEKAAGAAVALYEEPDVLVKVIRD 539

Query: 609 LFNEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYE-PAGPD---APDVFAVHRIDE 664
           LFN+DFS L+VSGDEAWNTIN YV +VAP+L+ +LTKY+ P GPD    PDVFAVHRIDE
Sbjct: 540 LFNDDFSGLVVSGDEAWNTINEYVNSVAPELVSKLTKYDPPIGPDGQHGPDVFAVHRIDE 599

Query: 665 QLAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVR 724
           QLAKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTGSGGNLEQTVT+NNLEAAEEIVR
Sbjct: 600 QLAKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVR 659

Query: 725 QLRLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRL 784
           QLRLR            MVLESNRDLVLRRLTE LARDRTRHQVSEVTSLGLVQLTRKRL
Sbjct: 660 QLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEVLARDRTRHQVSEVTSLGLVQLTRKRL 719

Query: 785 GTGLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAA 844
           GTGLVEAFST+C +C GRGI+LH DP +S                               
Sbjct: 720 GTGLVEAFSTSCPNCTGRGILLHTDPANST----------PMVGRKSESGGRRSKRSKKN 769

Query: 845 RTEEVHVAKVPDHTPGEHPMFKAMAAAN 872
           R++E  V KVP H PGEHPMFKAMAA +
Sbjct: 770 RSDETAVVKVPVHAPGEHPMFKAMAAGS 797



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 41/67 (61%), Positives = 48/67 (71%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M + A   + S +  Q   LP+RLRVHSLAR LGTTSRRVLD L+  DGR RSAHS+VD+
Sbjct: 1  MIDGAPPLEPSKEPTQHMELPDRLRVHSLARTLGTTSRRVLDVLSALDGRIRSAHSSVDR 60

Query: 61 ADAERVR 67
           DA RVR
Sbjct: 61 VDAVRVR 67



 Score = 39.3 bits (90), Expect = 3.2
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 156 PESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFE 193
           P++ + LE  +     ET  ERP Y+PLFVAPQP+  +
Sbjct: 84  PDNPVALEERDSRLVLETTVERPHYMPLFVAPQPIEVD 121


>tr|B8ZRN6|B8ZRN6_MYCLB Tax_Id=561304 SubName: Full=Possible
           ribonuclease;[Mycobacterium leprae]
          Length = 924

 Score =  778 bits (2010), Expect = 0.0
 Identities = 416/568 (73%), Positives = 446/568 (78%), Gaps = 22/568 (3%)

Query: 317 NTVVHERAPRTERSDKSDDS--------EIQGISGSTRLEAKXXXXXXXXXXXXXXPPIL 368
           NTVVHER PR      S D+        +I+GI GSTRLEAK                +L
Sbjct: 240 NTVVHERTPRAAGRSASFDNGVNGTGSADIKGIDGSTRLEAKRQRRRDGRDAGRRRSSVL 299

Query: 369 SEAEFLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGN 428
           SEAEFLARRE+VER M+VRD++RTEPPH GARYTQIAVLEDG+VVEHFVTSAASASLVGN
Sbjct: 300 SEAEFLARRESVERVMVVRDRIRTEPPHPGARYTQIAVLEDGIVVEHFVTSAASASLVGN 359

Query: 429 IYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQ 488
           IYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGDY+VVQ
Sbjct: 360 IYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGADRKIEQALKPGDYIVVQ 419

Query: 489 VSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAG 548
           V+KDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVP DAG
Sbjct: 420 VNKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPPDAG 479

Query: 549 VIIRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRD 608
           VIIRTASEGVKEEDIR DV RLQ+ W +I                 LYEEPDVLVKVIRD
Sbjct: 480 VIIRTASEGVKEEDIRKDVTRLQEHWEQIEAKTIQTKEKAAGAAVALYEEPDVLVKVIRD 539

Query: 609 LFNEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYE-PAGPD---APDVFAVHRIDE 664
           LFN+DFS L+VSGDEAWNTIN YV +VAP+L+ +LTKY+ P GPD    PDVFAVHRIDE
Sbjct: 540 LFNDDFSGLVVSGDEAWNTINEYVNSVAPELVSKLTKYDPPIGPDGQHGPDVFAVHRIDE 599

Query: 665 QLAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVR 724
           QLAKAMDRKVWLPSGGTLVIDRTEAMTV+DVNTGKFTGSGGNLEQTVT+NNLEAAEEIVR
Sbjct: 600 QLAKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVR 659

Query: 725 QLRLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRL 784
           QLRLR            MVLESNRDLVLRRLTE LARDRTRHQVSEVTSLGLVQLTRKRL
Sbjct: 660 QLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEVLARDRTRHQVSEVTSLGLVQLTRKRL 719

Query: 785 GTGLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAA 844
           GTGLVEAFST+C +C GRGI+LH DP +S                               
Sbjct: 720 GTGLVEAFSTSCPNCTGRGILLHTDPANST----------PMVGRKSESGGRRSKRSKKN 769

Query: 845 RTEEVHVAKVPDHTPGEHPMFKAMAAAN 872
           R++E  V KVP H PGEHPMFKAMAA +
Sbjct: 770 RSDETAVVKVPVHAPGEHPMFKAMAAGS 797



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 41/67 (61%), Positives = 48/67 (71%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M + A   + S +  Q   LP+RLRVHSLAR LGTTSRRVLD L+  DGR RSAHS+VD+
Sbjct: 1  MIDGAPPLEPSKEPTQHMELPDRLRVHSLARTLGTTSRRVLDVLSALDGRIRSAHSSVDR 60

Query: 61 ADAERVR 67
           DA RVR
Sbjct: 61 VDAVRVR 67



 Score = 39.3 bits (90), Expect = 3.2
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 156 PESRLILEHANIPPARETQTERPDYLPLFVAPQPVSFE 193
           P++ + LE  +     ET  ERP Y+PLFVAPQP+  +
Sbjct: 84  PDNPVALEERDSRLVLETTVERPHYMPLFVAPQPIEVD 121


>tr|Q7D748|Q7D748_MYCTU Tax_Id=1773 SubName: Full=Cytoplasmic axial
           filament protein, putative;[Mycobacterium tuberculosis]
          Length = 621

 Score =  723 bits (1866), Expect = 0.0
 Identities = 383/495 (77%), Positives = 411/495 (83%), Gaps = 18/495 (3%)

Query: 384 MIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEA 443
           M+VRD+VRTEPP  G RYTQIAVLEDG+VVEHFVTSAASASLVGNIYLGIVQNVLPSMEA
Sbjct: 1   MVVRDRVRTEPPLPGTRYTQIAVLEDGIVVEHFVTSAASASLVGNIYLGIVQNVLPSMEA 60

Query: 444 AFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGHKGARLTT 503
           AFVDIGRGRNGVLYAGEVNW+AAGLGG +RKIEQALKPGDYVVVQVSKDPVGHKGARLTT
Sbjct: 61  AFVDIGRGRNGVLYAGEVNWDAAGLGGADRKIEQALKPGDYVVVQVSKDPVGHKGARLTT 120

Query: 504 QVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEEDI 563
           QVSLAGR+LVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKE+DI
Sbjct: 121 QVSLAGRFLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEDDI 180

Query: 564 RSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSSLIVSGDE 623
           R+DV RL++RW +I                 LYEEPDVLVKVIRDLFNEDF  LIVSGDE
Sbjct: 181 RADVARLRERWEQIEAKAQETKEKAAGAAVALYEEPDVLVKVIRDLFNEDFVGLIVSGDE 240

Query: 624 AWNTINSYVEAVAPDLMPRLTKYEPA-GPD---APDVFAVHRIDEQLAKAMDRKVWLPSG 679
           AWNTIN YV +VAP+L+ +LTKYE A GPD   APDVF VHRIDEQLAKAMDRKVWLPSG
Sbjct: 241 AWNTINEYVNSVAPELVSKLTKYESADGPDGQSAPDVFTVHRIDEQLAKAMDRKVWLPSG 300

Query: 680 GTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXXXXX 739
           GTLVIDRTEAMTV+DVNTGKFTG+GGNLEQTVT+NNLEAAEEIVRQLRLR          
Sbjct: 301 GTLVIDRTEAMTVIDVNTGKFTGAGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDF 360

Query: 740 XXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTACTHC 799
             MVLESNRDLVLRRLTE+LARDRTRHQVSEVTSLGLVQLTRKRLGTGL+EAFST+C +C
Sbjct: 361 IDMVLESNRDLVLRRLTESLARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTSCPNC 420

Query: 800 GGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVH----VAKVP 855
            GRGI+LH DP+DSA++                           +R+EE      VAKVP
Sbjct: 421 SGRGILLHADPVDSAAAT----------GRKSEPGARRGKRSKKSRSEESSDRSMVAKVP 470

Query: 856 DHTPGEHPMFKAMAA 870
            H PGEHPMFKAMAA
Sbjct: 471 VHAPGEHPMFKAMAA 485


>tr|D5PPP8|D5PPP8_COREQ Tax_Id=525370 SubName: Full=Rne/Rng family
           ribonuclease; EC=3.1.4.-;[Rhodococcus equi ATCC 33707]
          Length = 1078

 Score =  699 bits (1805), Expect = 0.0
 Identities = 357/501 (71%), Positives = 411/501 (82%), Gaps = 7/501 (1%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR +   K    E+QGISGSTRLEAK              PPILSE+EFLAR
Sbjct: 353 NTVVHEREPRNKPRTKD---EVQGISGSTRLEAKRQRRRDGRDAGRRRPPILSESEFLAR 409

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAV+R M+VR+KV    P   A  TQ+AVLEDGV+VEHFVT ++S S+VGN+YLG VQN
Sbjct: 410 REAVDRVMVVREKVGGANP---AASTQVAVLEDGVLVEHFVTGSSSTSMVGNVYLGRVQN 466

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAF+DIGRGRNGVLYAGEVNWEAAGLGG+ RKIEQALKPGD V+VQVSKDPVGH
Sbjct: 467 VLPSMEAAFIDIGRGRNGVLYAGEVNWEAAGLGGRERKIEQALKPGDQVLVQVSKDPVGH 526

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SLAGR+LVYVPG +STGISRKLPDTER+RLKEILRE+VP+DAGVIIRTASE
Sbjct: 527 KGARLTTQISLAGRFLVYVPGGTSTGISRKLPDTERKRLKEILREIVPADAGVIIRTASE 586

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GV EE++  DV RLQ +W+ I                 LYEEPD+LVKV+RDLFNEDFS 
Sbjct: 587 GVSEEELSRDVTRLQTQWATIEEQAAKAKDGKSGSPQALYEEPDLLVKVVRDLFNEDFSK 646

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           L++ G++AWNT+ +Y++ VAPDL+PR+ +++PA P  PDVF  HRIDEQLAKA+DRKVWL
Sbjct: 647 LVIEGEKAWNTVETYIKTVAPDLLPRVERHDPA-PGTPDVFETHRIDEQLAKALDRKVWL 705

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGGTLVIDRTEAMTVVDVNTGKFTG+GGNLE+TVTRNNLEAAEEIVRQ+RLR       
Sbjct: 706 PSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIV 765

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTE+L RDRTRHQVSEVTSLGLVQ+TRK+LGTGLVEAFST C
Sbjct: 766 IDFIDMVLESNRDLVLRRLTESLGRDRTRHQVSEVTSLGLVQVTRKKLGTGLVEAFSTTC 825

Query: 797 THCGGRGIVLHGDPIDSASSN 817
            HC GRGI++H +P+++ SS+
Sbjct: 826 EHCHGRGIIVHTEPVETKSSD 846



 Score = 45.8 bits (107), Expect = 0.034
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 9  DLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERV 66
          + S Q      LPE++R H+LA++LG TS++VL   A      RSA S++ +  AER+
Sbjct: 7  EASVQAGATPALPEKIRAHALAKLLGVTSKQVLAEAAALGTELRSAQSSLTREIAERI 64


>tr|Q0SH48|Q0SH48_RHOSR Tax_Id=101510 SubName: Full=Probable
           ribonuclease E/ G;[Rhodococcus sp.]
          Length = 1134

 Score =  697 bits (1799), Expect = 0.0
 Identities = 358/500 (71%), Positives = 409/500 (81%), Gaps = 8/500 (1%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR +   K    E+QGI+GSTRLEAK              PPIL+E+EFLAR
Sbjct: 372 NTVVHEREPRNKSRSKD---EVQGITGSTRLEAKRQRRRDGRDAGRRRPPILTESEFLAR 428

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAV+R M+VRD++ T  PH     TQ+AVLEDGV+VEHFVT++ASAS+VGN+YLG VQN
Sbjct: 429 REAVDRVMVVRDRIATGQPHAT---TQVAVLEDGVLVEHFVTTSASASMVGNVYLGRVQN 485

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAF+DIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGD V+VQVSKDPVGH
Sbjct: 486 VLPSMEAAFIDIGRGRNGVLYAGEVNWEAAGLGGNSRKIEQALKPGDQVLVQVSKDPVGH 545

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SLAGR+LVYVPG +STGISRKLPDTER+RLK+ILR++VPSDAGVIIRTASE
Sbjct: 546 KGARLTTQISLAGRFLVYVPGGTSTGISRKLPDTERKRLKDILRDIVPSDAGVIIRTASE 605

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GV EE++  DV+RLQ +W+ I                 LYEEPD+LVKVIRDLFNEDFS 
Sbjct: 606 GVSEEELARDVKRLQDQWAGIEAQAAKAESGKSGNPQALYEEPDLLVKVIRDLFNEDFSK 665

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           L++ GD+AW+T+ SY+ +VAPDLMPRL ++     +  DVF  HRIDEQLAKA+DRKVWL
Sbjct: 666 LVIEGDKAWSTVESYIRSVAPDLMPRLEQH--TSDNGVDVFEAHRIDEQLAKALDRKVWL 723

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGGTLVIDRTEAMTVVDVNTGKFTG+GGNLE+TVTRNNLEAAEEIVRQ+RLR       
Sbjct: 724 PSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIV 783

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTEAL RDRTRHQVSEVTSLGLVQ+TRK+LGTGLVEAFST C
Sbjct: 784 VDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKKLGTGLVEAFSTTC 843

Query: 797 THCGGRGIVLHGDPIDSASS 816
            HC GRGIV+H +PI+  +S
Sbjct: 844 EHCHGRGIVVHAEPIEVKTS 863



 Score = 45.8 bits (107), Expect = 0.034
 Identities = 23/47 (48%), Positives = 33/47 (70%)

Query: 20 LPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERV 66
          LPE++RVH+LA++LG TS++VL   A      RSA S++ +  AERV
Sbjct: 25 LPEKIRVHALAKLLGVTSKQVLAEAAALGTELRSAQSSLQRDVAERV 71


>tr|C1AVK3|C1AVK3_RHOOB Tax_Id=632772 SubName: Full=Putative
           ribonuclease; EC=3.1.-.-;[Rhodococcus opacus]
          Length = 1110

 Score =  694 bits (1791), Expect = 0.0
 Identities = 356/500 (71%), Positives = 410/500 (82%), Gaps = 8/500 (1%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR +   K    E+QGI+GSTRLEAK              PPIL+E+EFLAR
Sbjct: 364 NTVVHEREPRNKSRSKD---EVQGITGSTRLEAKRQRRRDGRDAGRRRPPILTESEFLAR 420

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAV+R M+VRD+V +  PH     TQ+AVLEDGV+VEHFVT++ASAS+VGN+YLG VQN
Sbjct: 421 REAVDRVMVVRDRVVSGQPHAT---TQVAVLEDGVLVEHFVTTSASASMVGNVYLGRVQN 477

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAF+DIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGD V+VQVSKDPVGH
Sbjct: 478 VLPSMEAAFIDIGRGRNGVLYAGEVNWEAAGLGGNSRKIEQALKPGDQVLVQVSKDPVGH 537

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SLAGR+LVYVPG +STGISRKLPDTER+RLK+ILR++VPSDAGVIIRTASE
Sbjct: 538 KGARLTTQISLAGRFLVYVPGGTSTGISRKLPDTERKRLKDILRDIVPSDAGVIIRTASE 597

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GV EE++  DV RLQ++W+ I                 LYEEPD+LVKVIRDLFNEDFS 
Sbjct: 598 GVSEEELARDVTRLQEQWAGIEAQAAKAESGKSGNPQALYEEPDLLVKVIRDLFNEDFSK 657

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           L++ G++AW+T+ SY+++VAPDLMPRL ++     +  DVF  HRIDEQLAKA+DRKVWL
Sbjct: 658 LVIEGEKAWSTVESYIQSVAPDLMPRLKQH--TSDNGVDVFEAHRIDEQLAKALDRKVWL 715

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGGTLVIDRTEAMTVVDVNTGKFTG+GGNLE+TVTRNNLEAAEEIVRQ+RLR       
Sbjct: 716 PSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIV 775

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTEAL RDRTRHQVSEVTSLGLVQ+TRK+LGTGLVEAFST C
Sbjct: 776 VDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKKLGTGLVEAFSTTC 835

Query: 797 THCGGRGIVLHGDPIDSASS 816
            HC GRGI++H +PI+  +S
Sbjct: 836 EHCHGRGIIVHAEPIEVKTS 855



 Score = 45.8 bits (107), Expect = 0.034
 Identities = 24/63 (38%), Positives = 38/63 (60%)

Query: 4  DAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADA 63
          ++   D +T       LPE++RVH+LA++LG TS++V+   A      RSA S++ +  A
Sbjct: 9  NSEPNDTATAGSAVPALPEKIRVHALAKLLGVTSKQVIAEAAALGLELRSAQSSLQRDIA 68

Query: 64 ERV 66
          ERV
Sbjct: 69 ERV 71


>tr|D5UXK7|D5UXK7_TSUPA Tax_Id=521096 SubName: Full=Ribonuclease,
           Rne/Rng family;[Tsukamurella paurometabola DSM 20162]
          Length = 1040

 Score =  689 bits (1779), Expect = 0.0
 Identities = 370/564 (65%), Positives = 419/564 (74%), Gaps = 27/564 (4%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR     KS   E++GISGSTRLEAK              PPIL+E+EFLAR
Sbjct: 310 NTVVHEREPR----QKSRRDEVRGISGSTRLEAKRQRRRDGRDTVRRRPPILTESEFLAR 365

Query: 377 REAVERTMIVRDKVRTEP---------PHEGARYTQIAVLEDGVVVEHFVTSAASASLVG 427
           REAV+R M+VR++ +  P         PH    YTQ+AVLEDGV+VEHFVTS++SAS+VG
Sbjct: 366 REAVDRVMVVRERTKVGPSEGQDGHTVPHP-QDYTQVAVLEDGVLVEHFVTSSSSASMVG 424

Query: 428 NIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVV 487
           NIYLG VQNVLPSMEAAFVDIGRGRNGVLYAGEVNW+AAGL G  RKIEQALKPGD V+V
Sbjct: 425 NIYLGRVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLDGNARKIEQALKPGDQVLV 484

Query: 488 QVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDA 547
           QVSKDPVGHKGARLTTQ+SLAGR+LVYVPG  S GISRKLPDTER+RLKEIL+E+VP+DA
Sbjct: 485 QVSKDPVGHKGARLTTQISLAGRFLVYVPGGGSAGISRKLPDTERKRLKEILKEIVPADA 544

Query: 548 GVIIRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIR 607
           GVIIRTASEGV  E++  DV RLQ +W+EI                 LYEEPD+LVKV+R
Sbjct: 545 GVIIRTASEGVSAEELAGDVSRLQAQWAEIEEASKAKGVRA------LYEEPDLLVKVVR 598

Query: 608 DLFNEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLA 667
           DLFNEDFS L++ G  AW T+  YV  VAPDLMPR+ ++E    DAPDVFA +RIDEQLA
Sbjct: 599 DLFNEDFSKLVIEGGTAWGTVEKYVSTVAPDLMPRVERFEKRHADAPDVFAAYRIDEQLA 658

Query: 668 KAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLR 727
           KA+DRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLE+TVTRNNLEAAEEIVRQ+R
Sbjct: 659 KALDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQMR 718

Query: 728 LRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTG 787
           LR            MVLESNRDLVLRRLTEAL RDRTRHQVSEVTSLGLVQ+TRKR+GTG
Sbjct: 719 LRDIGGMIVVDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKRIGTG 778

Query: 788 LVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTE 847
           LVEAFST C  C GRGI++H DP+++A  +                         +   +
Sbjct: 779 LVEAFSTPCQACSGRGIIIHADPVETAGGD-----DSGRSGEKSEGSRKKRKRSKSDGAQ 833

Query: 848 EVHVAKVPDHT--PGEHPMFKAMA 869
           +  VA   D      EHPMFKAMA
Sbjct: 834 QPVVAPKDDKAAHKSEHPMFKAMA 857



 Score = 56.2 bits (134), Expect = 3e-05
 Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          MA+    E+ + +   +E  P++LRVH+LAR+LG TS+ VL  L +     RSAHS++D+
Sbjct: 1  MADTPSPEEQNNEA--REEFPQKLRVHALARLLGLTSKEVLAHLGDLGFVARSAHSSIDR 58

Query: 61 ADAERVR 67
          + AERVR
Sbjct: 59 SAAERVR 65


>tr|C1A1L8|C1A1L8_RHOE4 Tax_Id=234621 SubName: Full=Putative
           ribonuclease; EC=3.1.-.-;[Rhodococcus erythropolis]
          Length = 1099

 Score =  687 bits (1773), Expect = 0.0
 Identities = 355/501 (70%), Positives = 406/501 (81%), Gaps = 8/501 (1%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR +   K    E+QGISGSTRLEAK              PPIL+E+EFLAR
Sbjct: 390 NTVVHEREPRNKTRVKD---EVQGISGSTRLEAKRQRRRDGRDAGRRRPPILTESEFLAR 446

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAV+R M+VRD+  +  PH     TQ+AVLEDGV+VEHFVT++ASAS+VGN+YLG VQN
Sbjct: 447 REAVDRVMVVRDRADSGQPHAT---TQVAVLEDGVLVEHFVTNSASASMVGNVYLGRVQN 503

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAF+DIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGD V+VQVSKDPVGH
Sbjct: 504 VLPSMEAAFIDIGRGRNGVLYAGEVNWEAAGLGGNSRKIEQALKPGDQVLVQVSKDPVGH 563

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SLAGR+LVYVPG +STGISRKLPDTER+RLKEILR++VP+DAGVIIRTASE
Sbjct: 564 KGARLTTQISLAGRFLVYVPGGTSTGISRKLPDTERKRLKEILRDIVPADAGVIIRTASE 623

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GV EE++  DV RLQ +W+ I                 LYEEPD+LVKVIRDLFNEDFS 
Sbjct: 624 GVSEEELARDVTRLQAQWAGIEEQAAAADTGKSGNPQALYEEPDMLVKVIRDLFNEDFSK 683

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           L++ G++A  T+ +Y+ +VAPDL+PRL KY P   +  DVFA  RIDEQLAKA+DRKVWL
Sbjct: 684 LVIEGEKAHTTVENYINSVAPDLLPRLEKYTP--NNGIDVFAARRIDEQLAKALDRKVWL 741

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGGTLVIDRTEAMTVVDVNTGKFTG+GGNLE+TVTRNNLEAAEEIVRQ+RLR       
Sbjct: 742 PSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIV 801

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTE L RDRTRHQVSEVTSLGLVQ+TRK+LGTGLVEAFST C
Sbjct: 802 VDFIDMVLESNRDLVLRRLTECLGRDRTRHQVSEVTSLGLVQMTRKKLGTGLVEAFSTTC 861

Query: 797 THCGGRGIVLHGDPIDSASSN 817
            HC GRGI++H +P++  SS+
Sbjct: 862 EHCHGRGIIVHSEPVEVKSSD 882



 Score = 47.8 bits (112), Expect = 0.009
 Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          +A+ + TE  S+ TP+    P+++RVH+LA++LG TS++VL   A      RSA S++ +
Sbjct: 18 VADQSPTESDSSTTPE---FPDKMRVHALAKLLGVTSKQVLAEAAALGTELRSAQSSLQR 74

Query: 61 ADAERV 66
            A+R+
Sbjct: 75 DVAQRI 80


>tr|C3JRV1|C3JRV1_RHOER Tax_Id=596309 SubName: Full=Possible
           ribonuclease E Rne;[Rhodococcus erythropolis SK121]
          Length = 1081

 Score =  687 bits (1773), Expect = 0.0
 Identities = 355/501 (70%), Positives = 406/501 (81%), Gaps = 8/501 (1%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR +   K    E+QGISGSTRLEAK              PPIL+E+EFLAR
Sbjct: 372 NTVVHEREPRNKTRVKD---EVQGISGSTRLEAKRQRRRDGRDAGRRRPPILTESEFLAR 428

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAV+R M+VRD+  +  PH     TQ+AVLEDGV+VEHFVT++ASAS+VGN+YLG VQN
Sbjct: 429 REAVDRVMVVRDRADSGQPHAT---TQVAVLEDGVLVEHFVTNSASASMVGNVYLGRVQN 485

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAF+DIGRGRNGVLYAGEVNWEAAGLGG +RKIEQALKPGD V+VQVSKDPVGH
Sbjct: 486 VLPSMEAAFIDIGRGRNGVLYAGEVNWEAAGLGGNSRKIEQALKPGDQVLVQVSKDPVGH 545

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SLAGR+LVYVPG +STGISRKLPDTER+RLKEILR++VP+DAGVIIRTASE
Sbjct: 546 KGARLTTQISLAGRFLVYVPGGTSTGISRKLPDTERKRLKEILRDIVPADAGVIIRTASE 605

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GV EE++  DV RLQ +W+ I                 LYEEPD+LVKVIRDLFNEDFS 
Sbjct: 606 GVSEEELARDVTRLQAQWAGIEEQAAAADTGKSGNPQALYEEPDMLVKVIRDLFNEDFSK 665

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           L++ G++A  T+ +Y+ +VAPDL+PRL KY P   +  DVFA  RIDEQLAKA+DRKVWL
Sbjct: 666 LVIEGEKAHTTVENYINSVAPDLLPRLEKYTP--NNGIDVFAARRIDEQLAKALDRKVWL 723

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGGTLVIDRTEAMTVVDVNTGKFTG+GGNLE+TVTRNNLEAAEEIVRQ+RLR       
Sbjct: 724 PSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIV 783

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTE L RDRTRHQVSEVTSLGLVQ+TRK+LGTGLVEAFST C
Sbjct: 784 VDFIDMVLESNRDLVLRRLTECLGRDRTRHQVSEVTSLGLVQMTRKKLGTGLVEAFSTTC 843

Query: 797 THCGGRGIVLHGDPIDSASSN 817
            HC GRGI++H +P++  SS+
Sbjct: 844 EHCHGRGIIVHSEPVEVKSSD 864



 Score = 48.9 bits (115), Expect = 0.004
 Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          MA+ + TE  S+ TP+    P+++RVH+LA++LG TS++VL   A      RSA S++ +
Sbjct: 1  MADQSPTESDSSTTPE---FPDKMRVHALAKLLGVTSKQVLAEAAALGTELRSAQSSLHR 57

Query: 61 ADAERV 66
            A+R+
Sbjct: 58 DVAQRI 63


>tr|D0LAJ7|D0LAJ7_GORB4 Tax_Id=526226 SubName: Full=Ribonuclease,
           Rne/Rng family;[Gordonia bronchialis]
          Length = 1123

 Score =  681 bits (1756), Expect = 0.0
 Identities = 364/567 (64%), Positives = 417/567 (73%), Gaps = 29/567 (5%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR++R       E+QGISGSTRLEAK              PPIL+E+EFLAR
Sbjct: 419 NTVVHEREPRSKRVR----DEVQGISGSTRLEAKRQRRRDGRDAGRRRPPILTESEFLAR 474

Query: 377 REAVERTMIVRDKVRT--------EPPHEGAR----YTQIAVLEDGVVVEHFVTSAASAS 424
           REAV+R M+VR++           +  HE A     YTQ+AVLEDGV+VEHFVT+A S+S
Sbjct: 475 REAVDRVMVVRERGANSRIAPGTGDDGHEHATPIEDYTQVAVLEDGVLVEHFVTTATSSS 534

Query: 425 LVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDY 484
           +VGNIYLG VQNVLP MEAAFVDIGRGRNGVLYAGEVNW+AAGL G +RKIEQALKPGD 
Sbjct: 535 MVGNIYLGRVQNVLPGMEAAFVDIGRGRNGVLYAGEVNWDAAGLDGGSRKIEQALKPGDN 594

Query: 485 VVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVP 544
           V+VQVSKDPVGHKGARLTTQ+SLAGRYLVYVPG SSTGISRKLPD ER+RLK+IL ++VP
Sbjct: 595 VLVQVSKDPVGHKGARLTTQISLAGRYLVYVPGGSSTGISRKLPDVERKRLKQILAKLVP 654

Query: 545 SDAGVIIRTASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXX-LYEEPDVLV 603
           +DAGVIIRTASEGV  E++ +D+ RL+ +W  I                  LYEEPD+LV
Sbjct: 655 ADAGVIIRTASEGVSAEELGADIARLEAKWRSIDESVTQAKKNSGSAGPKALYEEPDLLV 714

Query: 604 KVIRDLFNEDFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRID 663
           +V+RDLFNEDF  L+V G +AWN +  YV +VAPDLM R+ K+E    DAPD F VHRID
Sbjct: 715 RVVRDLFNEDFKKLVVEGAKAWNLVEGYVGSVAPDLMDRVEKFEKPHADAPDSFVVHRID 774

Query: 664 EQLAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIV 723
           EQLAKA+DRKVWLPSGGTL+I+ TEAMTVVDVNTGKFTGSGGNLE+TVTRNNLEAAEEIV
Sbjct: 775 EQLAKALDRKVWLPSGGTLIIEHTEAMTVVDVNTGKFTGSGGNLEETVTRNNLEAAEEIV 834

Query: 724 RQLRLRXXXXXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKR 783
           RQ+RLR            MVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQ+TRKR
Sbjct: 835 RQMRLRDIGGMIIVDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQMTRKR 894

Query: 784 LGTGLVEAFSTACTHCGGRGIVLHGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXA 843
           LGTGL+EAFST CT CGGRG+++H +P++  S                            
Sbjct: 895 LGTGLLEAFSTTCTTCGGRGVIVHANPVEVRSEE------------AGRVEGGSKRSRRG 942

Query: 844 ARTEEVHVAKVPDHTPGEHPMFKAMAA 870
            R  E      P H P EHPMF+AMAA
Sbjct: 943 KRKPEAAPEHKPAHHPAEHPMFRAMAA 969



 Score = 55.5 bits (132), Expect = 4e-05
 Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 4/71 (5%)

Query: 1  MAEDAHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDK 60
          M ++    D +  +   E  P RLRVH+LAR+LG TSR VL  LAE     RSA S+VD+
Sbjct: 1  MTDNGSPADANAASGAAEEFPSRLRVHALARILGMTSREVLAHLAELGAEIRSAQSSVDR 60

Query: 61 ----ADAERVR 67
              A A+RVR
Sbjct: 61 ELAQAVADRVR 71


>tr|Q5Z044|Q5Z044_NOCFA Tax_Id=37329 SubName: Full=Putative
           uncharacterized protein;[Nocardia farcinica]
          Length = 1145

 Score =  665 bits (1715), Expect = 0.0
 Identities = 345/497 (69%), Positives = 394/497 (79%), Gaps = 12/497 (2%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVHER PR +   ++   E+QGI+GSTRLEAK              PPIL+E+EFLAR
Sbjct: 330 NTVVHEREPRNKARGRASVDEVQGITGSTRLEAKRQRRRDGREAGRRRPPILTESEFLAR 389

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           REAV+R M+VR+K   + P+     TQ+AVLED ++VEHFVT     S+VGN+YLG VQN
Sbjct: 390 REAVDRVMVVREKNFPDHPN----ITQVAVLEDNILVEHFVTDTGQPSMVGNVYLGKVQN 445

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGG+ RKIEQALKPGD V+VQVSKDPVGH
Sbjct: 446 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGKERKIEQALKPGDQVLVQVSKDPVGH 505

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SLAGR+LVYVPG +STGISRKLPDTER+RLKEILRE+VP DAGVIIRTASE
Sbjct: 506 KGARLTTQISLAGRFLVYVPGGTSTGISRKLPDTERKRLKEILREIVPPDAGVIIRTASE 565

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           GV E ++  DVERLQ  W  I                 LYEEPD+LVKVIRDLFNEDFS 
Sbjct: 566 GVSEAELARDVERLQSTWRSI----QEQADKDGGAPKTLYEEPDLLVKVIRDLFNEDFSQ 621

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           L++ G+ AW T+ +Y+  VAPDL+ R++++E  G    DVF  +RIDEQLAKA+DRKVWL
Sbjct: 622 LVIEGERAWTTVQNYIRTVAPDLLARVSRHENNG---VDVFETYRIDEQLAKALDRKVWL 678

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGG-NLEQTVTRNNLEAAEEIVRQLRLRXXXXXX 735
           PSGGTLVIDRTEAMTV+DVNTGKFTGSGG NLE+TVTRNNLEAAEEIVRQ+RLR      
Sbjct: 679 PSGGTLVIDRTEAMTVIDVNTGKFTGSGGSNLEETVTRNNLEAAEEIVRQMRLRDIGGMI 738

Query: 736 XXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTA 795
                 MVLESNRDLVLRRLTEAL RDRTRHQVSEVTSLGLVQ+TRK+LGTGLVEAFST 
Sbjct: 739 VVDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKKLGTGLVEAFSTT 798

Query: 796 CTHCGGRGIVLHGDPID 812
           C HC GRGI++H  P++
Sbjct: 799 CEHCHGRGIIVHNYPVE 815



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 32/63 (50%), Positives = 41/63 (65%)

Query: 5  AHTEDLSTQTPQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAE 64
          A  E L T +   + LPER+RVH+LA+ LG TS+R+L  L+E     RSA S VD+A AE
Sbjct: 2  ADQEPLETTSQDADQLPERIRVHALAKRLGVTSKRILAKLSELGSEARSAQSNVDRAVAE 61

Query: 65 RVR 67
           VR
Sbjct: 62 TVR 64


>tr|Q6NFV4|Q6NFV4_CORDI Tax_Id=1717 SubName: Full=Putative
           RNA-associated protein;[Corynebacterium diphtheriae]
          Length = 962

 Score =  619 bits (1597), Expect = e-175
 Identities = 323/542 (59%), Positives = 392/542 (72%), Gaps = 24/542 (4%)

Query: 327 TERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLARREAVERTMIV 386
           TE  +  + +E  GI GSTRLEA+                I+SEAEFLARRE+V RTM+V
Sbjct: 248 TETVEAEEITEPVGIKGSTRLEAQRRRRAELREESKKKRHIVSEAEFLARRESVTRTMVV 307

Query: 387 RDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFV 446
           R++ R +  H G   TQ+ VLEDG++VEHFVTS A AS++GNIYLG VQNVLPSMEAAF+
Sbjct: 308 RERDRVD--HHGM-VTQVGVLEDGMLVEHFVTSEAQASMIGNIYLGRVQNVLPSMEAAFI 364

Query: 447 DIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVS 506
           DIG+GRNGVLYAGEV+W AAGLGG+ R+IEQALK GD V+VQV+KDP+GHKGARLTTQ+S
Sbjct: 365 DIGKGRNGVLYAGEVDWRAAGLGGRGRRIEQALKSGDQVLVQVAKDPIGHKGARLTTQIS 424

Query: 507 LAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEEDIRSD 566
            AGRYLVYVPG  + GISRKLP  ER+RLKEIL+EVVP D G IIRTA+E V  E I +D
Sbjct: 425 FAGRYLVYVPGGRTAGISRKLPAPERKRLKEILKEVVPHDGGAIIRTAAENVSAEAIGAD 484

Query: 567 VERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSSLIVSGDEAWN 626
           V RL K W +I                 +YEEP++LVKV+RDLFNEDF+SL++ GD AWN
Sbjct: 485 VNRLHKLWDKIQQRTEEEKASKGAKPVTMYEEPNMLVKVVRDLFNEDFTSLVIDGDRAWN 544

Query: 627 TINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDR 686
           T+++YV++VAPDL+ RL +++ +  +  D F VHR++EQ+ KA+ RKVWLPSGGTLVIDR
Sbjct: 545 TVHAYVQSVAPDLLGRLVRFDRSEHEGRDAFEVHRVNEQIKKALSRKVWLPSGGTLVIDR 604

Query: 687 TEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXXXXXXXMVLES 746
           TEAMTV+DVNTGKFTG+GGNLE+TVT+NNLEAAEEIVRQ+RLR            MVL  
Sbjct: 605 TEAMTVIDVNTGKFTGAGGNLEETVTKNNLEAAEEIVRQMRLRDLGGMIVVDFIDMVLPE 664

Query: 747 NRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTACTHCGGRGIVL 806
           N+DLVLRRLTEAL RDRTRHQVSEVTSLGLVQ+TRKRLGTGL+E F+T C HC GRG+++
Sbjct: 665 NQDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKRLGTGLLETFATECPHCEGRGVII 724

Query: 807 HGDPIDSASSNXXXXXXXXXXXXXXXXXXXXXXXXXAARTEEVHVAKVPDHTPGEHPMFK 866
           H DP++   ++                          AR E     K  +HTP EHP   
Sbjct: 725 HDDPVEQRDAD------------------VAMEKSHRARNER---KKNKNHTPSEHPAAA 763

Query: 867 AM 868
           AM
Sbjct: 764 AM 765


>tr|C6WR86|C6WR86_ACTMD Tax_Id=446462 SubName: Full=Ribonuclease,
           Rne/Rng family; Flags: Precursor;[Actinosynnema mirum]
          Length = 974

 Score =  619 bits (1597), Expect = e-175
 Identities = 332/498 (66%), Positives = 378/498 (75%), Gaps = 20/498 (4%)

Query: 317 NTVVHERAPRTERSDKSDD----SEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAE 372
           NTVVH R  R  R D++D     +E++ + GSTRLEAK               P+LSEAE
Sbjct: 244 NTVVHVRETRDARDDRADSEAAQNEVRSVRGSTRLEAKRQRRRDGREAGRRRAPVLSEAE 303

Query: 373 FLARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLG 432
           FLARREAVERTM+VR++        G R TQI VLEDGV+VEHFVTSA S SLVGN+YLG
Sbjct: 304 FLARREAVERTMVVRER--------GDR-TQIGVLEDGVLVEHFVTSAGSGSLVGNVYLG 354

Query: 433 IVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKD 492
            VQNVLPSMEAAF+DIGRGRN VLYAGEV+W+AAGL G+ RKIEQAL  GD V+VQV+KD
Sbjct: 355 RVQNVLPSMEAAFIDIGRGRNAVLYAGEVDWDAAGLEGKARKIEQALSSGDSVLVQVTKD 414

Query: 493 PVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIR 552
           P+GHKGARLTTQ+SL GR+LVYVPG  +TGISRKLPD ER+RLK+IL+ VVP DAGVIIR
Sbjct: 415 PIGHKGARLTTQISLPGRFLVYVPGGGATGISRKLPDNERKRLKDILKRVVPDDAGVIIR 474

Query: 553 TASEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNE 612
           TASEGV EE++  DV RLQ +W  I                 LYEEPD+LVKV+RDLF E
Sbjct: 475 TASEGVAEEELARDVTRLQAQWQII---KDKAATPKAQAPQLLYEEPDLLVKVVRDLFTE 531

Query: 613 DFSSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDR 672
           DFS L+V G EAW+TI+ YV  VAPDL  RL ++        D F  +RIDEQL KA+DR
Sbjct: 532 DFSGLVVQGSEAWDTIDGYVRHVAPDLQERLHRH----VGNSDAFGEYRIDEQLMKALDR 587

Query: 673 KVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXX 732
           KVWLPSGG LVIDRTEAMTV+DVNTGKFTGSGGNLE+TVTRNNLEAAEEIVRQLRLR   
Sbjct: 588 KVWLPSGGYLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQLRLRDVG 647

Query: 733 XXXXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAF 792
                    MVLESNRDLVLRRLTE L RDRTRHQV+EVTSLGLVQ+TRKR+GTGL+EAF
Sbjct: 648 GIIVIDFIDMVLESNRDLVLRRLTECLGRDRTRHQVAEVTSLGLVQMTRKRVGTGLLEAF 707

Query: 793 STACTHCGGRGIVLHGDP 810
           S+ C HC GRG+V+  DP
Sbjct: 708 SSTCEHCRGRGLVVTTDP 725



 Score = 46.6 bits (109), Expect = 0.020
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query: 15 PQQEGLPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERV 66
          P    LP +LRVH+LA++LGTTS+ VL ALA+     RSA S+V +  A +V
Sbjct: 21 PALADLPAKLRVHALAKLLGTTSKDVLAALADLGETVRSAQSSVTRDLAIKV 72


>tr|C7MPQ3|C7MPQ3_SACVD Tax_Id=471857 SubName: Full=Ribonuclease,
           Rne/Rng family;[Saccharomonospora viridis]
          Length = 1093

 Score =  617 bits (1590), Expect = e-174
 Identities = 324/496 (65%), Positives = 380/496 (76%), Gaps = 16/496 (3%)

Query: 317 NTVVHER--APRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFL 374
           NTVVH R   P  E+  K++D  ++ + GSTRLEAK               PILSEAEFL
Sbjct: 430 NTVVHVRDGKPAEEKETKAEDG-VRSVRGSTRLEAKRQRRRDGREAGRRRAPILSEAEFL 488

Query: 375 ARREAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIV 434
           ARRE+VERTM+V ++  +         TQI VLEDGV+VEHFVTS+ S S+VGN+YLG V
Sbjct: 489 ARRESVERTMVVAERGDS---------TQIGVLEDGVLVEHFVTSSDSGSIVGNVYLGRV 539

Query: 435 QNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPV 494
           QNVLPSMEAAF+DIGRGRN VLYAGEV+W+AAGL G+ RKIEQAL  GD+V+VQV+KDPV
Sbjct: 540 QNVLPSMEAAFIDIGRGRNAVLYAGEVDWDAAGLEGKARKIEQALTTGDHVLVQVTKDPV 599

Query: 495 GHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTA 554
           GHKGARLTTQ+SL GR+LVYVP   +TGISRKLP+ ER+RLK+IL+ +VPSDAGVIIRTA
Sbjct: 600 GHKGARLTTQISLPGRFLVYVPSGGATGISRKLPENERRRLKDILKRIVPSDAGVIIRTA 659

Query: 555 SEGVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDF 614
           SEG+ EE++  DV RL+ +W  I                 LY+EPD+LVKVIRDLF EDF
Sbjct: 660 SEGISEEELARDVRRLKAQWEVIKEKAEAASAKKSGAPALLYQEPDLLVKVIRDLFTEDF 719

Query: 615 SSLIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKV 674
             L+V GD AW TI +YVE VAPDL+ R+ +Y   G    DVFA +RIDEQL KA+DRKV
Sbjct: 720 KKLVVQGDTAWETIRNYVEHVAPDLLDRVERYVGTG----DVFADYRIDEQLMKALDRKV 775

Query: 675 WLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXX 734
           WLPSGG LVIDRTEAMTV+DVNTGKFTGSGGNLE+TVTRNNLE+AEEIVRQLRLR     
Sbjct: 776 WLPSGGYLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNNLESAEEIVRQLRLRDIGGI 835

Query: 735 XXXXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFST 794
                  MVLESNR+LVLRRLTE L+RDRTRHQV+EVTSLGLVQ+TRKR+GTGL+EAFST
Sbjct: 836 IVIDFIDMVLESNRELVLRRLTECLSRDRTRHQVAEVTSLGLVQMTRKRVGTGLLEAFST 895

Query: 795 ACTHCGGRGIVLHGDP 810
            C HC GRG+++  DP
Sbjct: 896 TCEHCKGRGVIVSTDP 911



 Score = 44.7 bits (104), Expect = 0.075
 Identities = 25/47 (53%), Positives = 31/47 (65%)

Query: 20 LPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERV 66
          LP++ RVH LA++LGT+SR VL ALA+     RS  S V K  A RV
Sbjct: 26 LPDKTRVHLLAKLLGTSSREVLAALAQLGHTARSPQSGVSKDVALRV 72


>tr|A4F9K3|A4F9K3_SACEN Tax_Id=405948 SubName: Full=Ribonuclease,
           Rne/Rng family; EC=3.1.4.-;[Saccharopolyspora erythraea]
          Length = 1075

 Score =  609 bits (1571), Expect = e-172
 Identities = 323/501 (64%), Positives = 375/501 (74%), Gaps = 16/501 (3%)

Query: 317 NTVVHERAPRTERSDKSDDSEIQGISGSTRLEAKXXXXXXXXXXXXXXPPILSEAEFLAR 376
           NTVVH R    E    S D E++ + GSTRLEAK               P+LSEAEFLAR
Sbjct: 338 NTVVHVRESAPEGRHDSSDDEVRAVKGSTRLEAKRQRRRDGREAGRRRAPVLSEAEFLAR 397

Query: 377 REAVERTMIVRDKVRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQN 436
           RE+V+R M+VR         E    TQIAVLED V+VE+FVTSA S SLVGN+YLG VQN
Sbjct: 398 RESVDRRMVVR---------ENGDQTQIAVLEDNVLVENFVTSAGSGSLVGNVYLGRVQN 448

Query: 437 VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGH 496
           VLPSMEAAFVDIGRGRN VLYAGEV+W+AAGL G+ R+IEQAL  GD V+VQV+KDPVGH
Sbjct: 449 VLPSMEAAFVDIGRGRNAVLYAGEVDWDAAGLAGKARRIEQALSTGDSVLVQVTKDPVGH 508

Query: 497 KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASE 556
           KGARLTTQ+SL GR+LVYVPG  +TGISRKLPD ER+RLKEIL+ +VP +AGVIIRTASE
Sbjct: 509 KGARLTTQISLPGRFLVYVPGGGATGISRKLPDNERKRLKEILKRIVPENAGVIIRTASE 568

Query: 557 GVKEEDIRSDVERLQKRWSEIXXXXXXXXXXXXXXXXXLYEEPDVLVKVIRDLFNEDFSS 616
           G  EE +  DV RLQ +W  I                 LYEEPD+L+KV+RDLF EDFS+
Sbjct: 569 GTSEEALDRDVRRLQAQWEVI---KEKADSPKAQAPQLLYEEPDLLIKVVRDLFTEDFSA 625

Query: 617 LIVSGDEAWNTINSYVEAVAPDLMPRLTKYEPAGPDAPDVFAVHRIDEQLAKAMDRKVWL 676
           + V G++AW+TI +YV+ VAPDL  RL+K+        DVF   RI EQ+AKA+DRKVWL
Sbjct: 626 MAVQGNQAWDTIEAYVKHVAPDLAGRLSKHVGKN----DVFTEQRISEQIAKALDRKVWL 681

Query: 677 PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRXXXXXXX 736
           PSGG LVIDRTEAMTV+DVNTGKFTGSGGNLE+TVTRNNLEAAEEIVRQLRLR       
Sbjct: 682 PSGGYLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQLRLRDIGGIIV 741

Query: 737 XXXXXMVLESNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTAC 796
                MVLESNRDLVLRRLTE L RDRTRHQV+EVTSLGLVQ+TRKR+GTGL+EA+S+ C
Sbjct: 742 IDFIDMVLESNRDLVLRRLTECLGRDRTRHQVAEVTSLGLVQMTRKRVGTGLLEAYSSTC 801

Query: 797 THCGGRGIVLHGDPIDSASSN 817
            HC GRG+++  DP+  A +N
Sbjct: 802 EHCRGRGLLVSTDPVTHAHTN 822



 Score = 40.8 bits (94), Expect = 1.1
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)

Query: 14 TPQQEG-----LPERLRVHSLARVLGTTSRRVLDALAEFDGRQRSAHSTVDKADAERV 66
          TP QE      LP +LRVH+LA++LG +SR ++  L       RSA S + +  A +V
Sbjct: 17 TPTQEDQGTFELPAKLRVHALAKLLGASSREIITTLESLGESVRSAQSNITREVAMQV 74


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.315    0.132    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 4,945,385,838
Number of extensions: 175471106
Number of successful extensions: 350431
Number of sequences better than 10.0: 2262
Number of HSP's gapped: 341145
Number of HSP's successfully gapped: 2792
Length of query: 1037
Length of database: 4,236,830,644
Length adjustment: 149
Effective length of query: 888
Effective length of database: 2,373,158,908
Effective search space: 2107365110304
Effective search space used: 2107365110304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 86 (37.7 bits)