BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_4901
         (259 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|A0R1W8|RNPH_MYCS2 Tax_Id=246196 (rph)RecName: Full=Ribonuclea...   459   e-127
sp|Q1B585|RNPH_MYCSS Tax_Id=164756 (rph)RecName: Full=Ribonuclea...   418   e-115
sp|A1UJV2|RNPH_MYCSK Tax_Id=189918 (rph)RecName: Full=Ribonuclea...   418   e-115
sp|A3Q379|RNPH_MYCSJ Tax_Id=164757 (rph)RecName: Full=Ribonuclea...   418   e-115
sp|A4T8F7|RNPH_MYCGI Tax_Id=350054 (rph)RecName: Full=Ribonuclea...   417   e-115
sp|A1TD14|RNPH_MYCVP Tax_Id=350058 (rph)RecName: Full=Ribonuclea...   416   e-114
tr|B2HQF7|B2HQF7_MYCMM Tax_Id=216594 (rphA)SubName: Full=Ribonuc...   412   e-113
sp|Q73X87|RNPH_MYCPA Tax_Id=1770 (rph)RecName: Full=Ribonuclease...   410   e-113
sp|A0QD04|RNPH_MYCA1 Tax_Id=243243 (rph)RecName: Full=Ribonuclea...   409   e-112
sp|A0PUG0|RNPH_MYCUA Tax_Id=362242 (rph)RecName: Full=Ribonuclea...   406   e-111
tr|D5PGL7|D5PGL7_9MYCO Tax_Id=525368 (rph)SubName: Full=tRNA nuc...   404   e-111
sp|B1MLZ3|RNPH_MYCA9 Tax_Id=561007 (rph)RecName: Full=Ribonuclea...   404   e-111
sp|Q10628|RNPH_MYCTU Tax_Id=1773 (rph)RecName: Full=Ribonuclease...   399   e-109
sp|A5U240|RNPH_MYCTA Tax_Id=419947 (rph)RecName: Full=Ribonuclea...   399   e-109
sp|C1AMY5|RNPH_MYCBT Tax_Id=561275 (rph)RecName: Full=Ribonuclea...   399   e-109
sp|A1KID0|RNPH_MYCBP Tax_Id=410289 (rph)RecName: Full=Ribonuclea...   399   e-109
tr|C6DTP5|C6DTP5_MYCTK Tax_Id=478434 (rph)RecName: Full=Ribonucl...   399   e-109
tr|A5WM24|A5WM24_MYCTF Tax_Id=336982 (rph)RecName: Full=Ribonucl...   399   e-109
tr|D6GA66|D6GA66_MYCTU Tax_Id=478435 SubName: Full=Ribonuclease ...   399   e-109
tr|D6FGI6|D6FGI6_MYCTU Tax_Id=611303 SubName: Full=Ribonuclease ...   399   e-109
tr|D6F3V0|D6F3V0_MYCTU Tax_Id=611302 SubName: Full=Ribonuclease ...   399   e-109
tr|D5ZFA5|D5ZFA5_MYCTU Tax_Id=537210 SubName: Full=Ribonuclease ...   399   e-109
tr|D5Z3I2|D5Z3I2_MYCTU Tax_Id=537209 SubName: Full=Ribonuclease ...   399   e-109
tr|D5YQX6|D5YQX6_MYCTU Tax_Id=515616 SubName: Full=Ribonuclease ...   399   e-109
tr|D5YEJ3|D5YEJ3_MYCTU Tax_Id=520140 SubName: Full=Ribonuclease ...   399   e-109
tr|D5Y2Y7|D5Y2Y7_MYCTU Tax_Id=520141 SubName: Full=Ribonuclease ...   399   e-109
tr|D5XSX2|D5XSX2_MYCTU Tax_Id=515617 SubName: Full=Ribonuclease ...   399   e-109
tr|A4KGR0|A4KGR0_MYCTU Tax_Id=395095 (rph)RecName: Full=Ribonucl...   399   e-109
sp|P37939|RNPH_MYCLE Tax_Id=1769 (rph)RecName: Full=Ribonuclease...   398   e-109
sp|B8ZR59|RNPH_MYCLB Tax_Id=561304 (rph)RecName: Full=Ribonuclea...   398   e-109
sp|Q7U076|RNPH_MYCBO Tax_Id=1765 (rph)RecName: Full=Ribonuclease...   397   e-109
tr|D6FRW8|D6FRW8_MYCTU Tax_Id=611304 SubName: Full=Ribonuclease ...   397   e-109
tr|D5PN47|D5PN47_COREQ Tax_Id=525370 (rph)SubName: Full=tRNA nuc...   393   e-107
sp|Q5Z0V1|RNPH_NOCFA Tax_Id=37329 (rph)RecName: Full=Ribonucleas...   392   e-107
sp|C1A1V2|RNPH_RHOE4 Tax_Id=234621 (rph)RecName: Full=Ribonuclea...   390   e-106
tr|C3JU54|C3JU54_RHOER Tax_Id=596309 (rph)RecName: Full=Ribonucl...   390   e-106
tr|Q0SGT5|Q0SGT5_RHOSR Tax_Id=101510 SubName: Full=tRNA nucleoti...   384   e-105
tr|C1AVV8|C1AVV8_RHOOB Tax_Id=632772 (rph)SubName: Full=Ribonucl...   383   e-104
tr|D0L9N7|D0L9N7_GORB4 Tax_Id=526226 (rph)RecName: Full=Ribonucl...   376   e-102
tr|D5UWQ1|D5UWQ1_TSUPA Tax_Id=521096 SubName: Full=Ribonuclease ...   376   e-102
tr|C6WNQ7|C6WNQ7_ACTMD Tax_Id=446462 (rph)RecName: Full=Ribonucl...   364   5e-99
tr|C7MWC0|C7MWC0_SACVD Tax_Id=471857 (rph)RecName: Full=Ribonucl...   358   4e-97
sp|A4F913|RNPH_SACEN Tax_Id=405948 (rph)RecName: Full=Ribonuclea...   356   2e-96
tr|C8XFY0|C8XFY0_NAKMY Tax_Id=479431 (rph)RecName: Full=Ribonucl...   337   6e-91
tr|D2SBF1|D2SBF1_GEOOG Tax_Id=526225 SubName: Full=Ribonuclease ...   291   7e-77

>sp|A0R1W8|RNPH_MYCS2 Tax_Id=246196 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium smegmatis]
          Length = 259

 Score =  459 bits (1181), Expect = e-127
 Identities = 234/245 (95%), Positives = 234/245 (95%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD
Sbjct: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVS           LPYSEDSRAEVDMNVVA
Sbjct: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSVGVVDGRVRVDLPYSEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK
Sbjct: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254

Query: 255 KAFGS 259
           KAFGS
Sbjct: 255 KAFGS 259


>sp|Q1B585|RNPH_MYCSS Tax_Id=164756 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium sp.]
          Length = 260

 Score =  418 bits (1074), Expect = e-115
 Identities = 214/246 (86%), Positives = 225/246 (91%), Gaps = 1/246 (0%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRGFTSHPAGSVLVEFG+TRVMCTASVTEGVPRWRKG+GQGWLTAEYAMLPAATHD
Sbjct: 15  PVRITRGFTSHPAGSVLVEFGETRVMCTASVTEGVPRWRKGTGQGWLTAEYAMLPAATHD 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRTQEISRLIGRSLRACIDL ALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRVGGRTQEISRLIGRSLRACIDLNALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+LAAA +LSDPRPLSCAIAAVS           LPYSEDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLAAAEKLSDPRPLSCAIAAVSVGVVDGRVRVDLPYSEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPA-P 253
           TDTGTLVEIQGTGEGATFPRSTLDK+LD AL + +QLFV+QREALDAPYPG LPE  + P
Sbjct: 195 TDTGTLVEIQGTGEGATFPRSTLDKLLDLALASCDQLFVVQREALDAPYPGALPEPTSPP 254

Query: 254 KKAFGS 259
           KKAFGS
Sbjct: 255 KKAFGS 260


>sp|A1UJV2|RNPH_MYCSK Tax_Id=189918 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium sp.]
          Length = 260

 Score =  418 bits (1074), Expect = e-115
 Identities = 214/246 (86%), Positives = 225/246 (91%), Gaps = 1/246 (0%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRGFTSHPAGSVLVEFG+TRVMCTASVTEGVPRWRKG+GQGWLTAEYAMLPAATHD
Sbjct: 15  PVRITRGFTSHPAGSVLVEFGETRVMCTASVTEGVPRWRKGTGQGWLTAEYAMLPAATHD 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRTQEISRLIGRSLRACIDL ALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRVGGRTQEISRLIGRSLRACIDLNALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+LAAA +LSDPRPLSCAIAAVS           LPYSEDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLAAAEKLSDPRPLSCAIAAVSVGVVDGRVRVDLPYSEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPA-P 253
           TDTGTLVEIQGTGEGATFPRSTLDK+LD AL + +QLFV+QREALDAPYPG LPE  + P
Sbjct: 195 TDTGTLVEIQGTGEGATFPRSTLDKLLDLALASCDQLFVVQREALDAPYPGALPEPTSPP 254

Query: 254 KKAFGS 259
           KKAFGS
Sbjct: 255 KKAFGS 260


>sp|A3Q379|RNPH_MYCSJ Tax_Id=164757 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium sp.]
          Length = 260

 Score =  418 bits (1074), Expect = e-115
 Identities = 214/246 (86%), Positives = 225/246 (91%), Gaps = 1/246 (0%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRGFTSHPAGSVLVEFG+TRVMCTASVTEGVPRWRKG+GQGWLTAEYAMLPAATHD
Sbjct: 15  PVRITRGFTSHPAGSVLVEFGETRVMCTASVTEGVPRWRKGTGQGWLTAEYAMLPAATHD 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRTQEISRLIGRSLRACIDL ALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRVGGRTQEISRLIGRSLRACIDLNALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+LAAA +LSDPRPLSCAIAAVS           LPYSEDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLAAAEKLSDPRPLSCAIAAVSVGVVDGRVRVDLPYSEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPA-P 253
           TDTGTLVEIQGTGEGATFPRSTLDK+LD AL + +QLFV+QREALDAPYPG LPE  + P
Sbjct: 195 TDTGTLVEIQGTGEGATFPRSTLDKLLDLALASCDQLFVVQREALDAPYPGALPEPTSPP 254

Query: 254 KKAFGS 259
           KKAFGS
Sbjct: 255 KKAFGS 260


>sp|A4T8F7|RNPH_MYCGI Tax_Id=350054 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium gilvum]
          Length = 260

 Score =  417 bits (1071), Expect = e-115
 Identities = 211/246 (85%), Positives = 223/246 (90%), Gaps = 1/246 (0%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRGFT+HPAGSVLVEFG+TRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD
Sbjct: 15  PVTITRGFTTHPAGSVLVEFGETRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRTQEISRL+GRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           A+VALSDAVT+L AAG+LSDPRPLSCAIAAVS           LPY+EDSRAEVDMNVVA
Sbjct: 135 AFVALSDAVTYLGAAGKLSDPRPLSCAIAAVSVGVVDGRVRVDLPYTEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAP- 253
           TDTGTLVEIQGTGEGATFPRSTLDKMLDAA+ A +QLF +QR AL+ PYPG LPE   P 
Sbjct: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAAMAACDQLFEIQRAALELPYPGTLPESAEPA 254

Query: 254 KKAFGS 259
           KKAFGS
Sbjct: 255 KKAFGS 260


>sp|A1TD14|RNPH_MYCVP Tax_Id=350058 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium vanbaalenii]
          Length = 260

 Score =  416 bits (1070), Expect = e-114
 Identities = 212/246 (86%), Positives = 224/246 (91%), Gaps = 1/246 (0%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRGFT+HPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATH+
Sbjct: 15  PVTITRGFTTHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHE 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RS RESVKGR+GGRTQEISRL+GRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSGRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+LAAAG+LSDPRPLSCAIAAVS           LPY+EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLAAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYTEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPE-GPAP 253
           TDTGTLVEIQGTGEGATFPRSTLDKMLDAA+ A +QLF +QR AL+ PYPGVLPE G   
Sbjct: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAAMAACDQLFEIQRAALELPYPGVLPEPGEPA 254

Query: 254 KKAFGS 259
           KKAFGS
Sbjct: 255 KKAFGS 260


>tr|B2HQF7|B2HQF7_MYCMM Tax_Id=216594 (rphA)SubName:
           Full=Ribonuclease RphA;[Mycobacterium marinum]
          Length = 276

 Score =  412 bits (1059), Expect = e-113
 Identities = 205/245 (83%), Positives = 220/245 (89%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PVVITRGFT +PAGSVL+EFG+T+VMCTASVTEGVPRWRKGSG GWLTAEYAMLP+ATH 
Sbjct: 32  PVVITRGFTENPAGSVLIEFGRTKVMCTASVTEGVPRWRKGSGLGWLTAEYAMLPSATHT 91

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRTQEISRL+GRSLRACIDLAALGENTIA+DCDVLQADGGTRTAAITG
Sbjct: 92  RSDRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAITG 151

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAV +LAAAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 152 AYVALADAVNYLAAAGKLSDPRPLSCAIAAVSVGVVDGRVRVDLPYEEDSRAEVDMNVVA 211

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVE+QGTGEGATFPRSTLDK+LD ALGA + LF  QR+AL  PYPGVLPEGP P 
Sbjct: 212 TDTGTLVEVQGTGEGATFPRSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPEGPPPS 271

Query: 255 KAFGS 259
           KAFGS
Sbjct: 272 KAFGS 276


>sp|Q73X87|RNPH_MYCPA Tax_Id=1770 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium paratuberculosis]
          Length = 259

 Score =  410 bits (1055), Expect = e-113
 Identities = 204/245 (83%), Positives = 220/245 (89%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           P+VITRGFT HPAGSVL+EFG T+VMCTASVTEGVPRWRKGSG GWLTAEYAMLP+ATH 
Sbjct: 15  PLVITRGFTEHPAGSVLIEFGHTKVMCTASVTEGVPRWRKGSGLGWLTAEYAMLPSATHT 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+ GRTQEISRLIGRSLRACIDLAALGENTIA+DCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           A+VAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY ED+RAEVDMNVVA
Sbjct: 135 AFVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDARAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVE+QGTGEGATFPRSTLDK+LDAAL A ++LF  QREAL  PYPGVLPEGP P 
Sbjct: 195 TDTGTLVEVQGTGEGATFPRSTLDKLLDAALAACDKLFAAQREALKLPYPGVLPEGPPPP 254

Query: 255 KAFGS 259
           KAFGS
Sbjct: 255 KAFGS 259


>sp|A0QD04|RNPH_MYCA1 Tax_Id=243243 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium avium]
          Length = 259

 Score =  409 bits (1051), Expect = e-112
 Identities = 203/245 (82%), Positives = 219/245 (89%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           P+VITRGFT HPAGSVL+EFG T+VMCTASVTEGVPRWRKGSG GWLTAEYAMLP+ATH 
Sbjct: 15  PLVITRGFTEHPAGSVLIEFGHTKVMCTASVTEGVPRWRKGSGLGWLTAEYAMLPSATHT 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+ GRTQEISRLIGRSLRACIDLAALGENTIA+DCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           A+VAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY ED+RAEVDMNVVA
Sbjct: 135 AFVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDARAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVE+QGTGEGATFPRSTLDK+LDAAL A ++LF  QREAL  PYPGVLPEGP P 
Sbjct: 195 TDTGTLVEVQGTGEGATFPRSTLDKLLDAALAACDKLFAAQREALKLPYPGVLPEGPPPP 254

Query: 255 KAFGS 259
           K FGS
Sbjct: 255 KVFGS 259


>sp|A0PUG0|RNPH_MYCUA Tax_Id=362242 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium ulcerans]
          Length = 259

 Score =  406 bits (1043), Expect = e-111
 Identities = 203/245 (82%), Positives = 218/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PVVITRGFT +PAGSVL+EFG+T+VMCTASVTEGV RWRKGSG GWLTAEYAMLP+ATH 
Sbjct: 15  PVVITRGFTENPAGSVLIEFGRTKVMCTASVTEGVSRWRKGSGLGWLTAEYAMLPSATHT 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRTQEISRL+GRSLRACIDLAALGENTIA+DCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAV +LAAAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVNYLAAAGKLSDPRPLSCAIAAVSVGVVDGRVRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVE+QGTGEGATFPRSTLDK+LD ALGA + LF  Q +AL  PYPGVLPEGP P 
Sbjct: 195 TDTGTLVEVQGTGEGATFPRSTLDKLLDMALGACDTLFAAQCDALALPYPGVLPEGPPPS 254

Query: 255 KAFGS 259
           KAFGS
Sbjct: 255 KAFGS 259


>tr|D5PGL7|D5PGL7_9MYCO Tax_Id=525368 (rph)SubName: Full=tRNA
           nucleotidyltransferase; EC=2.7.7.56;[Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 259

 Score =  404 bits (1039), Expect = e-111
 Identities = 202/245 (82%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PVVITRGFT HPAGSVL+EFG T+VMCTASVT+GVPRWRKGSG GWLTAEYAMLP+ATH 
Sbjct: 15  PVVITRGFTDHPAGSVLIEFGHTKVMCTASVTDGVPRWRKGSGLGWLTAEYAMLPSATHT 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+ GRTQEISRLIGRSLRACIDLAALGENTIA+DCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           A+VAL+DAVT+LAAAG+LSDPRPLSCAIAAVS           LPY ED+RAEVDMNVVA
Sbjct: 135 AFVALADAVTYLAAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDARAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVE+QGTGEGATFPRSTLDK+LD AL A ++LF  QREAL  PYPG LPEG  P 
Sbjct: 195 TDTGTLVEVQGTGEGATFPRSTLDKLLDVALAACDKLFAAQREALALPYPGELPEGAPPP 254

Query: 255 KAFGS 259
           KAFGS
Sbjct: 255 KAFGS 259


>sp|B1MLZ3|RNPH_MYCA9 Tax_Id=561007 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium abscessus]
          Length = 258

 Score =  404 bits (1038), Expect = e-111
 Identities = 205/245 (83%), Positives = 219/245 (89%), Gaps = 1/245 (0%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRGFTSHPAGSVL+EFGQTRVMCTAS TEGVPRWRKGSG GWLTAEYAMLPA+TH 
Sbjct: 15  PVTITRGFTSHPAGSVLIEFGQTRVMCTASATEGVPRWRKGSGLGWLTAEYAMLPASTHT 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRTQEISRLIGRSLRACIDL+ALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVKGRVGGRTQEISRLIGRSLRACIDLSALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+LAA G+L+D  PLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLAAHGKLADDEPLSCAIAAVSVGVVDGRVRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVE+QGTGEGATF RSTLDK+LDAA+GA +QLFVLQ+EAL  PYPGVLP+ P  K
Sbjct: 195 TDTGTLVEVQGTGEGATFARSTLDKLLDAAVGAADQLFVLQKEALALPYPGVLPDAP-QK 253

Query: 255 KAFGS 259
           KAFGS
Sbjct: 254 KAFGS 258


>sp|Q10628|RNPH_MYCTU Tax_Id=1773 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium tuberculosis]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>sp|A5U240|RNPH_MYCTA Tax_Id=419947 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium tuberculosis]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>sp|C1AMY5|RNPH_MYCBT Tax_Id=561275 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium bovis]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>sp|A1KID0|RNPH_MYCBP Tax_Id=410289 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium bovis]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|C6DTP5|C6DTP5_MYCTK Tax_Id=478434 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Mycobacterium tuberculosis]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|A5WM24|A5WM24_MYCTF Tax_Id=336982 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Mycobacterium tuberculosis]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D6GA66|D6GA66_MYCTU Tax_Id=478435 SubName: Full=Ribonuclease
           rphA;[Mycobacterium tuberculosis KZN 605]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D6FGI6|D6FGI6_MYCTU Tax_Id=611303 SubName: Full=Ribonuclease
           rphA;[Mycobacterium tuberculosis CPHL_A]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D6F3V0|D6F3V0_MYCTU Tax_Id=611302 SubName: Full=Ribonuclease
           PH;[Mycobacterium tuberculosis T46]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D5ZFA5|D5ZFA5_MYCTU Tax_Id=537210 SubName: Full=Ribonuclease
           rphA;[Mycobacterium tuberculosis T17]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D5Z3I2|D5Z3I2_MYCTU Tax_Id=537209 SubName: Full=Ribonuclease
           rphA (RNase ph);[Mycobacterium tuberculosis GM 1503]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D5YQX6|D5YQX6_MYCTU Tax_Id=515616 SubName: Full=Ribonuclease
           PH;[Mycobacterium tuberculosis 02_1987]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D5YEJ3|D5YEJ3_MYCTU Tax_Id=520140 SubName: Full=Ribonuclease
           rphA;[Mycobacterium tuberculosis EAS054]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D5Y2Y7|D5Y2Y7_MYCTU Tax_Id=520141 SubName: Full=Ribonuclease
           rphA;[Mycobacterium tuberculosis T85]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D5XSX2|D5XSX2_MYCTU Tax_Id=515617 SubName: Full=Ribonuclease
           rphA;[Mycobacterium tuberculosis T92]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|A4KGR0|A4KGR0_MYCTU Tax_Id=395095 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Mycobacterium tuberculosis str. Haarlem]
          Length = 259

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/245 (81%), Positives = 217/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>sp|P37939|RNPH_MYCLE Tax_Id=1769 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium leprae]
          Length = 259

 Score =  398 bits (1023), Expect = e-109
 Identities = 199/244 (81%), Positives = 216/244 (88%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           VVITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKGSG+GWLTAEYAMLP+ATH R
Sbjct: 16  VVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTAEYAMLPSATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S+RESVKGR+ GRTQEISRLIGRSLRACIDLAALGENTIA+DCDVLQADGGTRTAA+TGA
Sbjct: 76  SERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAVTGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL+DAVT+L+AAGRL DPRPLSCAIAAVS           L Y EDSRAEVDMNV+AT
Sbjct: 136 YVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEEDSRAEVDMNVIAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPKK 255
           DTGTLVEIQGTGEGATFPRSTLDK+LD ALGA ++LFV QR+AL  PY G+ PEGP P K
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALPYQGMSPEGPPPPK 255

Query: 256 AFGS 259
           AFGS
Sbjct: 256 AFGS 259


>sp|B8ZR59|RNPH_MYCLB Tax_Id=561304 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium leprae]
          Length = 259

 Score =  398 bits (1023), Expect = e-109
 Identities = 199/244 (81%), Positives = 216/244 (88%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           VVITRGFT HPAGSVL+EFG T+VMCTAS TEGVPRWRKGSG+GWLTAEYAMLP+ATH R
Sbjct: 16  VVITRGFTEHPAGSVLIEFGHTKVMCTASPTEGVPRWRKGSGKGWLTAEYAMLPSATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S+RESVKGR+ GRTQEISRLIGRSLRACIDLAALGENTIA+DCDVLQADGGTRTAA+TGA
Sbjct: 76  SERESVKGRLSGRTQEISRLIGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAVTGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL+DAVT+L+AAGRL DPRPLSCAIAAVS           L Y EDSRAEVDMNV+AT
Sbjct: 136 YVALADAVTYLSAAGRLLDPRPLSCAIAAVSVGVVDGRIRVDLSYEEDSRAEVDMNVIAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPKK 255
           DTGTLVEIQGTGEGATFPRSTLDK+LD ALGA ++LFV QR+AL  PY G+ PEGP P K
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDMALGACDKLFVAQRDALALPYQGMSPEGPPPPK 255

Query: 256 AFGS 259
           AFGS
Sbjct: 256 AFGS 259


>sp|Q7U076|RNPH_MYCBO Tax_Id=1765 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Mycobacterium bovis]
          Length = 259

 Score =  397 bits (1020), Expect = e-109
 Identities = 198/245 (80%), Positives = 216/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLI RSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLISRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D6FRW8|D6FRW8_MYCTU Tax_Id=611304 SubName: Full=Ribonuclease
           rphA;[Mycobacterium tuberculosis K85]
          Length = 259

 Score =  397 bits (1019), Expect = e-109
 Identities = 198/245 (80%), Positives = 216/245 (88%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV+ITRGFT +PAGSVL+EFG T+V+CTASVTEGVPRWRK +G GWLTAEYAMLP+ATH 
Sbjct: 15  PVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHS 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESV+GR+ GRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG
Sbjct: 75  RSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVT+L+AAG+LSDPRPLSCAIAAVS           LPY EDS AEVDMNVVA
Sbjct: 135 AYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSPAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPK 254
           TDTGTLVEIQGTGEGATF RSTLDK+LD ALGA + LF  QR+AL  PYPGVLP+GP P 
Sbjct: 195 TDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPQGPPPP 254

Query: 255 KAFGS 259
           KAFG+
Sbjct: 255 KAFGT 259


>tr|D5PN47|D5PN47_COREQ Tax_Id=525370 (rph)SubName: Full=tRNA
           nucleotidyltransferase; EC=2.7.7.56;[Rhodococcus equi
           ATCC 33707]
          Length = 260

 Score =  393 bits (1010), Expect = e-107
 Identities = 201/245 (82%), Positives = 214/245 (87%), Gaps = 1/245 (0%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRGFT+HPAGSVLVEFG TRVMCTASV EGVPRWRKGSG GWLTAEYAMLPAATH R
Sbjct: 16  VRITRGFTNHPAGSVLVEFGNTRVMCTASVEEGVPRWRKGSGLGWLTAEYAMLPAATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S RESVKG++GGRTQEISRL+GRSLRACIDLAA+GENTIAIDCDVLQADGGTRTAAITGA
Sbjct: 76  SGRESVKGKVGGRTQEISRLVGRSLRACIDLAAIGENTIAIDCDVLQADGGTRTAAITGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL DAVT+L AAGRL+DP+P+SCAIAAVS           LPY EDSRAEVDMNVVAT
Sbjct: 136 YVALVDAVTYLRAAGRLADPQPISCAIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAP-K 254
           DTGTLVEIQGTGEGATFPRSTLDK+LD+AL   EQLF +Q+ AL  PYPGVLPE   P K
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFAIQQAALAEPYPGVLPEATEPKK 255

Query: 255 KAFGS 259
           KAFGS
Sbjct: 256 KAFGS 260


>sp|Q5Z0V1|RNPH_NOCFA Tax_Id=37329 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Nocardia farcinica]
          Length = 257

 Score =  392 bits (1008), Expect = e-107
 Identities = 198/240 (82%), Positives = 210/240 (87%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRGFT+HPAGSVLVEFGQTRVMCTASVTEGVP WR+ SG GWLTAEYAMLPAATH R
Sbjct: 16  VRITRGFTTHPAGSVLVEFGQTRVMCTASVTEGVPAWRRDSGLGWLTAEYAMLPAATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S RESVKGR+GGRTQEISRL+GRSLRACIDLAA+GENTIAIDCDVLQADGGTRTAAITGA
Sbjct: 76  SGRESVKGRVGGRTQEISRLVGRSLRACIDLAAIGENTIAIDCDVLQADGGTRTAAITGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL+DAVTWL AAG L+DP+P+SCAIAAVS           LPY EDSRAEVDMNVVAT
Sbjct: 136 YVALADAVTWLGAAGALADPQPISCAIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPKK 255
           DTGTLVEIQGTGEGATFPRSTLDK+LDAAL   EQLF +Q+EAL  PYPGVLPE   P K
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDAALAGCEQLFAVQKEALALPYPGVLPEPAEPAK 255


>sp|C1A1V2|RNPH_RHOE4 Tax_Id=234621 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Rhodococcus erythropolis]
          Length = 261

 Score =  390 bits (1001), Expect = e-106
 Identities = 199/246 (80%), Positives = 212/246 (86%), Gaps = 2/246 (0%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRGFTSHPAGSVLVEFG TRVMCTASV EGVPRWRKGSG GWLTAEYAMLPAATH R
Sbjct: 16  VKITRGFTSHPAGSVLVEFGNTRVMCTASVEEGVPRWRKGSGLGWLTAEYAMLPAATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S RESVKG++GGRTQEISRLIGRSLRACIDLAA+GENTIA+DCDVLQADGGTRTAA+TGA
Sbjct: 76  SGRESVKGKVGGRTQEISRLIGRSLRACIDLAAIGENTIALDCDVLQADGGTRTAAVTGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL DAVT+L AA  LSDP+P+SC IAAVS           LPY EDSRAEVDMNVVAT
Sbjct: 136 YVALVDAVTYLRAADLLSDPQPISCGIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPE--GPAP 253
           DTGTLVEIQGTGEGATFPRSTLDK+LD+AL   EQLF +QR+AL  PYPGVLPE   P P
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQRQALAEPYPGVLPEPKNPEP 255

Query: 254 KKAFGS 259
           KK FG+
Sbjct: 256 KKKFGA 261


>tr|C3JU54|C3JU54_RHOER Tax_Id=596309 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Rhodococcus erythropolis SK121]
          Length = 261

 Score =  390 bits (1001), Expect = e-106
 Identities = 199/246 (80%), Positives = 212/246 (86%), Gaps = 2/246 (0%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRGFTSHPAGSVLVEFG TRVMCTASV EGVPRWRKGSG GWLTAEYAMLPAATH R
Sbjct: 16  VKITRGFTSHPAGSVLVEFGNTRVMCTASVEEGVPRWRKGSGLGWLTAEYAMLPAATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S RESVKG++GGRTQEISRLIGRSLRACIDLAA+GENTIA+DCDVLQADGGTRTAA+TGA
Sbjct: 76  SGRESVKGKVGGRTQEISRLIGRSLRACIDLAAIGENTIALDCDVLQADGGTRTAAVTGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL DAVT+L AA  LSDP+P+SC IAAVS           LPY EDSRAEVDMNVVAT
Sbjct: 136 YVALVDAVTYLRAADLLSDPQPISCGIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPE--GPAP 253
           DTGTLVEIQGTGEGATFPRSTLDK+LD+AL   EQLF +QR+AL  PYPGVLPE   P P
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQRQALAEPYPGVLPEPKNPEP 255

Query: 254 KKAFGS 259
           KK FG+
Sbjct: 256 KKKFGA 261


>tr|Q0SGT5|Q0SGT5_RHOSR Tax_Id=101510 SubName: Full=tRNA
           nucleotidyltransferase; EC=2.7.7.56;[Rhodococcus sp.]
          Length = 262

 Score =  384 bits (985), Expect = e-105
 Identities = 194/246 (78%), Positives = 211/246 (85%), Gaps = 3/246 (1%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRGFT+HPAGSVLVEFG TRVMCTASV +GVPRWR+GSG GWLTAEYAMLPAATH R
Sbjct: 16  VKITRGFTTHPAGSVLVEFGNTRVMCTASVEDGVPRWRQGSGLGWLTAEYAMLPAATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S RESVKG++GGRTQEISRL+GRSLRACIDLAA+GENTIA+DCDVLQADGGTRTAAITGA
Sbjct: 76  SGRESVKGKVGGRTQEISRLVGRSLRACIDLAAIGENTIALDCDVLQADGGTRTAAITGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL DAVT+L AAGRL+DP+P+SC IAAVS           LPY EDSRAEVDMNVVAT
Sbjct: 136 YVALVDAVTYLRAAGRLADPQPISCGIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAP-- 253
           DTGTLVEIQGTGEGATFPRSTLDK+LD+AL   EQLF +Q+ AL+ PYPG LPE   P  
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQKAALELPYPGALPEPKVPET 255

Query: 254 -KKAFG 258
            KK FG
Sbjct: 256 SKKKFG 261


>tr|C1AVV8|C1AVV8_RHOOB Tax_Id=632772 (rph)SubName:
           Full=Ribonuclease PH; EC=2.7.7.56;[Rhodococcus opacus]
          Length = 262

 Score =  383 bits (984), Expect = e-104
 Identities = 194/247 (78%), Positives = 212/247 (85%), Gaps = 3/247 (1%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRGFT+HPAGSVLVEFG TRVMCTASV +GVPRWR+G+G GWLTAEYAMLPAATH R
Sbjct: 16  VKITRGFTTHPAGSVLVEFGNTRVMCTASVEDGVPRWRQGTGLGWLTAEYAMLPAATHTR 75

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S RESVKG++GGRTQEISRL+GRSLRACIDLAA+GENTIA+DCDVLQADGGTRTAAITGA
Sbjct: 76  SGRESVKGKVGGRTQEISRLVGRSLRACIDLAAIGENTIALDCDVLQADGGTRTAAITGA 135

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL DAVT+L AAGRL+DP+P+SC IAAVS           LPY EDSRAEVDMNVVAT
Sbjct: 136 YVALVDAVTYLRAAGRLADPQPISCGIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 195

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAP-- 253
           DTGTLVEIQGTGEGATFPRSTLDK+LD+AL   EQLF +Q+ AL+ PYPG LPE   P  
Sbjct: 196 DTGTLVEIQGTGEGATFPRSTLDKLLDSALAGCEQLFEIQKAALELPYPGELPEPKVPET 255

Query: 254 -KKAFGS 259
            KK FGS
Sbjct: 256 SKKKFGS 262


>tr|D0L9N7|D0L9N7_GORB4 Tax_Id=526226 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Gordonia bronchialis]
          Length = 251

 Score =  376 bits (966), Expect = e-102
 Identities = 188/234 (80%), Positives = 201/234 (85%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           P+  TRGFTSHPAGSVLVEFGQTRVMCTASV +GVP WR+GSG GWLTAEYAMLPAATH+
Sbjct: 15  PISFTRGFTSHPAGSVLVEFGQTRVMCTASVNDGVPPWRRGSGLGWLTAEYAMLPAATHE 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RS RESVKGR+GGRT EISRL+GRSLRACIDL ALGENTIA+DCDVLQADGGTRTAAITG
Sbjct: 75  RSSRESVKGRVGGRTHEISRLVGRSLRACIDLGALGENTIALDCDVLQADGGTRTAAITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAVTWL AAG+LSDP+PLSCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALADAVTWLRAAGKLSDPQPLSCAIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLP 248
           TD GTLVE+QGTGEGATF RSTLD +LD A   TE+LF  QRE L APYPG LP
Sbjct: 195 TDAGTLVEVQGTGEGATFARSTLDALLDVAAVGTEKLFEAQREVLAAPYPGELP 248


>tr|D5UWQ1|D5UWQ1_TSUPA Tax_Id=521096 SubName: Full=Ribonuclease PH;
           EC=2.7.7.56;[Tsukamurella paurometabola DSM 20162]
          Length = 260

 Score =  376 bits (966), Expect = e-102
 Identities = 190/245 (77%), Positives = 210/245 (85%), Gaps = 1/245 (0%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRGFT +PAGSVLVEFG T+V+CTASV  GVP WR+GSGQGWLTAEYAMLP ATH+
Sbjct: 15  PVTITRGFTQNPAGSVLVEFGNTKVLCTASVELGVPGWRRGSGQGWLTAEYAMLPGATHE 74

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RS RES KG++GGRT EISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTA+ITG
Sbjct: 75  RSRRESTKGKVGGRTHEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTASITG 134

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL DAVT+L AAG+L+DP+P+SCAIAAVS           LPY EDSRAEVDMNVVA
Sbjct: 135 AYVALCDAVTYLGAAGKLTDPQPISCAIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVA 194

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPA-P 253
           TDTGTLVE+QGTGEGATF R+TLD MLD+AL  TE+LF +Q++AL APYPGVLPE    P
Sbjct: 195 TDTGTLVEVQGTGEGATFARTTLDWMLDSALSGTEKLFAVQKQALAAPYPGVLPETEGEP 254

Query: 254 KKAFG 258
           KK FG
Sbjct: 255 KKKFG 259


>tr|C6WNQ7|C6WNQ7_ACTMD Tax_Id=446462 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Actinosynnema mirum]
          Length = 254

 Score =  364 bits (935), Expect = 5e-99
 Identities = 184/238 (77%), Positives = 198/238 (83%)

Query: 18  ITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDRSD 77
           ITRGF   PAGSVL+EFG TRV+C ASVTEGVPRWR GSG GW+TAEYAMLP+ATH R D
Sbjct: 17  ITRGFQQWPAGSVLIEFGNTRVLCAASVTEGVPRWRSGSGLGWVTAEYAMLPSATHTRGD 76

Query: 78  RESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGAYV 137
           RES+KGR+GGRT EISRLIGRSLRACIDLAALGENTI IDCDV+QADGGTRTAAITGAYV
Sbjct: 77  RESIKGRVGGRTHEISRLIGRSLRACIDLAALGENTIVIDCDVIQADGGTRTAAITGAYV 136

Query: 138 ALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVATDT 197
           AL+DAVTWL AAGRL+DP+PLSCAI+AVS           LPY EDSRAEVDMNVVATD 
Sbjct: 137 ALADAVTWLGAAGRLADPQPLSCAISAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVATDA 196

Query: 198 GTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPKK 255
           GTLVE+QGTGEGATF RSTLD+MLD AL    +L  LQ EAL  PYPGVLPE    KK
Sbjct: 197 GTLVEVQGTGEGATFARSTLDRMLDLALQGCAELNRLQTEALAQPYPGVLPEPKQRKK 254


>tr|C7MWC0|C7MWC0_SACVD Tax_Id=471857 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Saccharomonospora viridis]
          Length = 258

 Score =  358 bits (919), Expect = 4e-97
 Identities = 179/240 (74%), Positives = 196/240 (81%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRGF   PAGSVL+E G TRV+C ASV EGVPRWR GSG GW+TAEY+MLP+ATH R
Sbjct: 15  VRITRGFQQWPAGSVLIEVGNTRVLCAASVVEGVPRWRNGSGLGWVTAEYSMLPSATHTR 74

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
            DRESVKGRIGGRT EISRLIGRSLR+CIDLAALGENTI IDCDV+QADGGTRTAAITG 
Sbjct: 75  GDRESVKGRIGGRTHEISRLIGRSLRSCIDLAALGENTIVIDCDVIQADGGTRTAAITGG 134

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL+DA+TWL AAGRL+DP+PLS A++AVS           LPY EDSRAEVDMNVVAT
Sbjct: 135 YVALADAITWLGAAGRLADPKPLSAAVSAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 194

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPAPKK 255
           D GTL+E+QGTGEGATF RSTLDKMLD A     +L  +Q EAL APYPG LPE P PKK
Sbjct: 195 DAGTLIEVQGTGEGATFTRSTLDKMLDLAQAGCAELARIQAEALAAPYPGELPEPPQPKK 254


>sp|A4F913|RNPH_SACEN Tax_Id=405948 (rph)RecName: Full=Ribonuclease
           PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA
           nucleotidyltransferase;[Saccharopolyspora erythraea]
          Length = 251

 Score =  356 bits (913), Expect = 2e-96
 Identities = 179/237 (75%), Positives = 200/237 (84%)

Query: 16  VVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHDR 75
           V ITRG+   PAGSVLVEFG+TRV+C ASV EGVPRWR GSG GW+TAEYAMLP++T+ R
Sbjct: 15  VRITRGYQDWPAGSVLVEFGRTRVLCAASVQEGVPRWRAGSGLGWVTAEYAMLPSSTNTR 74

Query: 76  SDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGA 135
           S RESVKGRIGGRT EISRL+GRSLRACIDLAALGENTIA+DCDV+QADGGTRTAAITGA
Sbjct: 75  SARESVKGRIGGRTHEISRLVGRSLRACIDLAALGENTIALDCDVIQADGGTRTAAITGA 134

Query: 136 YVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVAT 195
           YVAL+DA+TWL+AAGRL+DP+PLSC+IAAVS           LPY EDSRAEVDMNVVAT
Sbjct: 135 YVALADAITWLSAAGRLTDPKPLSCSIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNVVAT 194

Query: 196 DTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAPYPGVLPEGPA 252
           D GTLVE+QGTGEGATF RST+DKM+D AL    +L  +Q EAL APYPG LP G A
Sbjct: 195 DHGTLVEVQGTGEGATFTRSTMDKMIDFALAGCSELSRIQSEALAAPYPGELPGGAA 251


>tr|C8XFY0|C8XFY0_NAKMY Tax_Id=479431 (rph)RecName:
           Full=Ribonuclease PH; Short=RNase PH;
           EC=2.7.7.56;[Nakamurella multipartita]
          Length = 246

 Score =  337 bits (865), Expect = 6e-91
 Identities = 169/228 (74%), Positives = 187/228 (82%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV  TRGF  HPAGSVLVEFG T+V+C ASVT GVPRWRKGSG GWLTAEYAMLP+ATH+
Sbjct: 14  PVTFTRGFQQHPAGSVLVEFGGTKVLCAASVTTGVPRWRKGSGLGWLTAEYAMLPSATHE 73

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           RSDRESVKGR+GGRT EISRLIGRSLRAC+DL +LGENTIA+DCDVLQADGGTRTAAITG
Sbjct: 74  RSDRESVKGRVGGRTHEISRLIGRSLRACLDLRSLGENTIAVDCDVLQADGGTRTAAITG 133

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAV +L   G+L+DP+PLSC IAAVS           LPY ED+RAEVDMNVVA
Sbjct: 134 AYVALADAVAYLRERGQLADPQPLSCQIAAVSVGVVGGRVRLDLPYEEDARAEVDMNVVA 193

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREALDAP 242
           TD GTLVE+QGT EGAT+ RSTLD MLD+AL     L  +QR AL  P
Sbjct: 194 TDVGTLVEVQGTAEGATYSRSTLDAMLDSALAGIATLTEMQRAALAGP 241


>tr|D2SBF1|D2SBF1_GEOOG Tax_Id=526225 SubName: Full=Ribonuclease PH;
           EC=2.7.7.56;[Geodermatophilus obscurus]
          Length = 250

 Score =  291 bits (744), Expect = 7e-77
 Identities = 149/225 (66%), Positives = 169/225 (75%)

Query: 15  PVVITRGFTSHPAGSVLVEFGQTRVMCTASVTEGVPRWRKGSGQGWLTAEYAMLPAATHD 74
           PV ITRG+  H  GSVLVEFG+TRV+C ASVTEGVPRWRKGSG GW+TAEYAMLP ATH 
Sbjct: 20  PVTITRGWLDHAEGSVLVEFGRTRVLCAASVTEGVPRWRKGSGLGWVTAEYAMLPRATHT 79

Query: 75  RSDRESVKGRIGGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITG 134
           R DRESVKGRIGGRT EISRLIGRSLRA IDL ALGEN++AIDCDVLQADGGTRTAAITG
Sbjct: 80  RGDRESVKGRIGGRTHEISRLIGRSLRAAIDLGALGENSVAIDCDVLQADGGTRTAAITG 139

Query: 135 AYVALSDAVTWLAAAGRLSDPRPLSCAIAAVSXXXXXXXXXXXLPYSEDSRAEVDMNVVA 194
           AYVAL+DAV WL    +L+ PR +  ++AAVS           L Y ED RA  DMNVV 
Sbjct: 140 AYVALADAVGWLGERRKLARPRAVLQSVAAVSVGVVDGQPRLDLAYEEDVRAGTDMNVVC 199

Query: 195 TDTGTLVEIQGTGEGATFPRSTLDKMLDAALGATEQLFVLQREAL 239
           T  G+ VE+QGT E   F R+ LD +LD A+G   +L  +Q +AL
Sbjct: 200 TGDGSFVEVQGTAENGVFDRAALDALLDLAVGGCAELSRIQADAL 244


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.316    0.132    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 1,919,542,524
Number of extensions: 73126438
Number of successful extensions: 177197
Number of sequences better than 10.0: 1649
Number of HSP's gapped: 176991
Number of HSP's successfully gapped: 1654
Length of query: 259
Length of database: 4,236,830,644
Length adjustment: 135
Effective length of query: 124
Effective length of database: 2,548,269,004
Effective search space: 315985356496
Effective search space used: 315985356496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)