BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_5071 (132 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R2D3|A0R2D3_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 268 2e-70 tr|O05768|O05768_MYCSM Tax_Id=1772 SubName: Full=Putative unchar... 268 2e-70 tr|A3Q3Q5|A3Q3Q5_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 215 2e-54 tr|Q1B4T6|Q1B4T6_MYCSS Tax_Id=164756 SubName: Full=Putative unch... 213 6e-54 tr|A1UKA1|A1UKA1_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 213 6e-54 tr|D5PG72|D5PG72_9MYCO Tax_Id=525368 SubName: Full=Putative unch... 202 1e-50 tr|A1TDM0|A1TDM0_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 200 4e-50 tr|Q73WV4|Q73WV4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 189 1e-46 tr|A4T8X1|A4T8X1_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 188 2e-46 tr|B2HS45|B2HS45_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 187 3e-46 tr|A0PVW2|A0PVW2_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 187 3e-46 tr|A0QCH1|A0QCH1_MYCA1 Tax_Id=243243 SubName: Full=RNA polymeras... 187 5e-46 tr|O05736|O05736_MYCAV Tax_Id=1764 SubName: Full=Putative unchar... 187 5e-46 tr|Q7U0C8|Q7U0C8_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 179 8e-44 tr|Q79FQ8|Q79FQ8_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 179 8e-44 tr|C6DUF0|C6DUF0_MYCTK Tax_Id=478434 SubName: Full=RNA polymeras... 179 8e-44 tr|C1AML6|C1AML6_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 179 8e-44 tr|A5WLQ0|A5WLQ0_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 179 8e-44 tr|A5U1S0|A5U1S0_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 179 8e-44 tr|A1KI10|A1KI10_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 179 8e-44 tr|O06290|O06290_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 179 8e-44 tr|D6FZN2|D6FZN2_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 179 8e-44 tr|D6FR62|D6FR62_MYCTU Tax_Id=611304 SubName: Full=RNA polymeras... 179 8e-44 tr|D6FG62|D6FG62_MYCTU Tax_Id=611303 SubName: Full=RNA polymeras... 179 8e-44 tr|D6F3H3|D6F3H3_MYCTU Tax_Id=611302 SubName: Full=Putative unch... 179 8e-44 tr|D5ZEX7|D5ZEX7_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 179 8e-44 tr|D5Z2C4|D5Z2C4_MYCTU Tax_Id=537209 SubName: Full=RNA polymeras... 179 8e-44 tr|D5YQK1|D5YQK1_MYCTU Tax_Id=515616 SubName: Full=RNA polymeras... 179 8e-44 tr|D5YE63|D5YE63_MYCTU Tax_Id=520140 SubName: Full=RNA polymeras... 179 8e-44 tr|D5Y2L2|D5Y2L2_MYCTU Tax_Id=520141 SubName: Full=RNA polymeras... 179 8e-44 tr|D5XSJ0|D5XSJ0_MYCTU Tax_Id=515617 SubName: Full=Putative unch... 179 8e-44 tr|A4KGE7|A4KGE7_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 179 8e-44 tr|A2VHC2|A2VHC2_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 179 8e-44 tr|Q9CCA5|Q9CCA5_MYCLE Tax_Id=1769 SubName: Full=Putative unchar... 178 2e-43 tr|B8ZQZ3|B8ZQZ3_MYCLB Tax_Id=561304 SubName: Full=Putative unch... 178 2e-43 tr|Q8VK50|Q8VK50_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 178 2e-43 tr|B1MLM2|B1MLM2_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 162 2e-38 tr|C1AZL4|C1AZL4_RHOOB Tax_Id=632772 SubName: Full=Putative unch... 118 2e-25 tr|Q0S3Y1|Q0S3Y1_RHOSR Tax_Id=101510 SubName: Full=Putative unch... 117 5e-25 tr|C1A2N0|C1A2N0_RHOE4 Tax_Id=234621 SubName: Full=Putative unch... 111 3e-23 tr|C3JTT4|C3JTT4_RHOER Tax_Id=596309 SubName: Full=RNA polymeras... 111 3e-23 tr|D5PWF3|D5PWF3_COREQ Tax_Id=525370 SubName: Full=Putative unch... 110 4e-23 tr|Q5YQF9|Q5YQF9_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 109 1e-22 tr|D5UVB0|D5UVB0_TSUPA Tax_Id=521096 SubName: Full=Putative unch... 105 2e-21 tr|D0L8U7|D0L8U7_GORB4 Tax_Id=526226 SubName: Full=Putative unch... 78 4e-13 >tr|A0R2D3|A0R2D3_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 132 Score = 268 bits (685), Expect = 2e-70 Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA Sbjct: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF Sbjct: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 Query: 121 ADDPTRGRRKRR 132 ADDPTRGRRKRR Sbjct: 121 ADDPTRGRRKRR 132 >tr|O05768|O05768_MYCSM Tax_Id=1772 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 145 Score = 268 bits (685), Expect = 2e-70 Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA Sbjct: 14 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 73 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF Sbjct: 74 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 133 Query: 121 ADDPTRGRRKRR 132 ADDPTRGRRKRR Sbjct: 134 ADDPTRGRRKRR 145 >tr|A3Q3Q5|A3Q3Q5_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 132 Score = 215 bits (547), Expect = 2e-54 Identities = 103/132 (78%), Positives = 119/132 (90%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 M DPGHVFRRAFSWLP+QFASQS+APVGAPRQFGSTEHLS+EA+AAFVDGEL M+AH+RA Sbjct: 1 MVDPGHVFRRAFSWLPAQFASQSNAPVGAPRQFGSTEHLSIEAVAAFVDGELSMTAHMRA 60 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 A+H+SLC +CAAEVDAQSQARTALR+S PIAIPN+LLGMLSQIP P + + ++Q KF Sbjct: 61 ANHMSLCLQCAAEVDAQSQARTALRDSQPIAIPNTLLGMLSQIPQHMPHSSVETADQPKF 120 Query: 121 ADDPTRGRRKRR 132 A+DPTR RRKRR Sbjct: 121 AEDPTRDRRKRR 132 >tr|Q1B4T6|Q1B4T6_MYCSS Tax_Id=164756 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 132 Score = 213 bits (542), Expect = 6e-54 Identities = 103/132 (78%), Positives = 117/132 (88%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 M DPGHVFRRAFSWLP+QFASQS+APVGAPRQFGSTEHLS+EA+AAFVDGEL M+AH+RA Sbjct: 1 MVDPGHVFRRAFSWLPAQFASQSNAPVGAPRQFGSTEHLSIEAVAAFVDGELSMTAHMRA 60 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 A HLSLCP+CAAEVDAQSQAR+ALR+S PIAIPN+LLGMLSQIP P + ++Q KF Sbjct: 61 ASHLSLCPQCAAEVDAQSQARSALRDSQPIAIPNTLLGMLSQIPQHMPHSPVEEADQPKF 120 Query: 121 ADDPTRGRRKRR 132 ADD TR RR+RR Sbjct: 121 ADDQTRDRRRRR 132 >tr|A1UKA1|A1UKA1_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 132 Score = 213 bits (542), Expect = 6e-54 Identities = 103/132 (78%), Positives = 117/132 (88%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 M DPGHVFRRAFSWLP+QFASQS+APVGAPRQFGSTEHLS+EA+AAFVDGEL M+AH+RA Sbjct: 1 MVDPGHVFRRAFSWLPAQFASQSNAPVGAPRQFGSTEHLSIEAVAAFVDGELSMTAHMRA 60 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 A HLSLCP+CAAEVDAQSQAR+ALR+S PIAIPN+LLGMLSQIP P + ++Q KF Sbjct: 61 ASHLSLCPQCAAEVDAQSQARSALRDSQPIAIPNTLLGMLSQIPQHMPHSPVEEADQPKF 120 Query: 121 ADDPTRGRRKRR 132 ADD TR RR+RR Sbjct: 121 ADDQTRDRRRRR 132 >tr|D5PG72|D5PG72_9MYCO Tax_Id=525368 SubName: Full=Putative uncharacterized protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 132 Score = 202 bits (513), Expect = 1e-50 Identities = 103/133 (77%), Positives = 117/133 (87%), Gaps = 3/133 (2%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 MAD GHVFRRAFSWLP+QFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRM+AHLRA Sbjct: 2 MADRGHVFRRAFSWLPAQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMNAHLRA 61 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTP-EVTPDVSEQAK 119 AHHLSLCP+CAAEVD QS+AR ALR+S PI IP++LLGML++IP+ +P + TP SE + Sbjct: 62 AHHLSLCPQCAAEVDDQSRARAALRDSHPIRIPSTLLGMLAEIPYESPDDSTPRASE--R 119 Query: 120 FADDPTRGRRKRR 132 FAD R +RKRR Sbjct: 120 FADPDAREQRKRR 132 >tr|A1TDM0|A1TDM0_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein;[Mycobacterium vanbaalenii] Length = 132 Score = 200 bits (509), Expect = 4e-50 Identities = 99/130 (76%), Positives = 110/130 (84%), Gaps = 1/130 (0%) Query: 3 DPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAH 62 DPGH FRRAFSWLPSQ ASQSD PVG PRQFGSTEHLS+EA+AAFVDGELRMSAHLRAAH Sbjct: 4 DPGHAFRRAFSWLPSQLASQSDDPVG-PRQFGSTEHLSIEAVAAFVDGELRMSAHLRAAH 62 Query: 63 HLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKFAD 122 HLSLCPECA EVDAQ QAR ALRES P+A+P+SLLG+LSQIP+ TP P+ ++ + AD Sbjct: 63 HLSLCPECALEVDAQRQAREALRESRPVAMPSSLLGLLSQIPNHTPVEAPEPADSPQLAD 122 Query: 123 DPTRGRRKRR 132 R RRKRR Sbjct: 123 GAQRSRRKRR 132 >tr|Q73WV4|Q73WV4_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 133 Score = 189 bits (479), Expect = 1e-46 Identities = 97/131 (74%), Positives = 110/131 (83%), Gaps = 6/131 (4%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 M D GHVFRRAFSWLP+QFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRM+AHLRA Sbjct: 8 MPDRGHVFRRAFSWLPAQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMNAHLRA 67 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 AHHLS C +CAAEVD QS+AR ALR+S PI IP +LLGML++IP+ +P+ TPD + Sbjct: 68 AHHLSQCAQCAAEVDDQSRARAALRDSRPIRIPANLLGMLAEIPYESPD-TPD-----RL 121 Query: 121 ADDPTRGRRKR 131 AD R RR+R Sbjct: 122 ADRDARDRRRR 132 >tr|A4T8X1|A4T8X1_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein;[Mycobacterium gilvum] Length = 133 Score = 188 bits (478), Expect = 2e-46 Identities = 96/130 (73%), Positives = 105/130 (80%), Gaps = 5/130 (3%) Query: 3 DPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAH 62 DPGH FRRAFSWLPSQ SD+PVG PRQFGSTEHLS EAIAAF DGELRM+AHLRAAH Sbjct: 9 DPGHAFRRAFSWLPSQ----SDSPVG-PRQFGSTEHLSTEAIAAFADGELRMTAHLRAAH 63 Query: 63 HLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKFAD 122 HLSLC ECA EVDAQ QAR ALR+SCP+ IP+SLLG+LSQIP+RTP + E + AD Sbjct: 64 HLSLCSECAQEVDAQRQAREALRDSCPVDIPSSLLGLLSQIPNRTPVDAQEPPESPQLAD 123 Query: 123 DPTRGRRKRR 132 P R RRKRR Sbjct: 124 GPPRARRKRR 133 >tr|B2HS45|B2HS45_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 134 Score = 187 bits (476), Expect = 3e-46 Identities = 94/134 (70%), Positives = 109/134 (81%), Gaps = 2/134 (1%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 MAD GHVFRRAFSWLP+QFASQSDAPVGAPR+F STEHLS+EAIAAFVDGELRM+AHLRA Sbjct: 1 MADRGHVFRRAFSWLPAQFASQSDAPVGAPRRFRSTEHLSIEAIAAFVDGELRMNAHLRA 60 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPD--VSEQA 118 AHHLS+CP+CAAEV+ ++AR ALR+S PI IP +LLGMLS+IPH E P+ Sbjct: 61 AHHLSMCPQCAAEVEDHTRARAALRDSHPIRIPTALLGMLSEIPHHPSEGAPEDTTGLAD 120 Query: 119 KFADDPTRGRRKRR 132 FA+ R +RKRR Sbjct: 121 SFAERQARDQRKRR 134 >tr|A0PVW2|A0PVW2_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 134 Score = 187 bits (476), Expect = 3e-46 Identities = 94/134 (70%), Positives = 109/134 (81%), Gaps = 2/134 (1%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 MAD GHVFRRAFSWLP+QFASQSDAPVGAPR+F STEHLS+EAIAAFVDGELRM+AHLRA Sbjct: 1 MADRGHVFRRAFSWLPAQFASQSDAPVGAPRRFRSTEHLSIEAIAAFVDGELRMNAHLRA 60 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPD--VSEQA 118 AHHLS+CP+CAAEV+ ++AR ALR+S PI IP +LLGMLS+IPH E P+ Sbjct: 61 AHHLSMCPQCAAEVEDHTRARAALRDSHPIRIPTALLGMLSEIPHHPSEGAPEDTTGLAD 120 Query: 119 KFADDPTRGRRKRR 132 FA+ R +RKRR Sbjct: 121 SFAERQARDQRKRR 134 >tr|A0QCH1|A0QCH1_MYCA1 Tax_Id=243243 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium avium] Length = 424 Score = 187 bits (474), Expect = 5e-46 Identities = 96/131 (73%), Positives = 109/131 (83%), Gaps = 6/131 (4%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 M D GHVFRRAFSWLP+QFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRM+AHLRA Sbjct: 299 MPDRGHVFRRAFSWLPAQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMNAHLRA 358 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 AHHLS C +CAAEVD QS+AR ALR+S PI IP +LLGML++IP+ +P+ PD + Sbjct: 359 AHHLSQCAQCAAEVDDQSRARAALRDSRPIRIPANLLGMLAEIPYESPD-APD-----RL 412 Query: 121 ADDPTRGRRKR 131 AD R RR+R Sbjct: 413 ADRDARDRRRR 423 >tr|O05736|O05736_MYCAV Tax_Id=1764 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 133 Score = 187 bits (474), Expect = 5e-46 Identities = 96/131 (73%), Positives = 109/131 (83%), Gaps = 6/131 (4%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 M D GHVFRRAFSWLP+QFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRM+AHLRA Sbjct: 8 MPDRGHVFRRAFSWLPAQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMNAHLRA 67 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSEQAKF 120 AHHLS C +CAAEVD QS+AR ALR+S PI IP +LLGML++IP+ +P+ PD + Sbjct: 68 AHHLSQCAQCAAEVDDQSRARAALRDSRPIRIPANLLGMLAEIPYESPD-APD-----RL 121 Query: 121 ADDPTRGRRKR 131 AD R RR+R Sbjct: 122 ADRDARDRRRR 132 >tr|Q7U0C8|Q7U0C8_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb1254;[Mycobacterium bovis] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|Q79FQ8|Q79FQ8_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|C6DUF0|C6DUF0_MYCTK Tax_Id=478434 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium tuberculosis] Length = 219 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 66 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 125 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 126 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 177 >tr|C1AML6|C1AML6_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|A5WLQ0|A5WLQ0_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 193 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 40 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 99 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 100 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 151 >tr|A5U1S0|A5U1S0_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 219 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 66 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 125 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 126 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 177 >tr|A1KI10|A1KI10_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_1282;[Mycobacterium bovis] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|O06290|O06290_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 193 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 40 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 99 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 100 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 151 >tr|D6FZN2|D6FZN2_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 219 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 66 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 125 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 126 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 177 >tr|D6FR62|D6FR62_MYCTU Tax_Id=611304 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium tuberculosis K85] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|D6FG62|D6FG62_MYCTU Tax_Id=611303 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium tuberculosis CPHL_A] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|D6F3H3|D6F3H3_MYCTU Tax_Id=611302 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T46] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|D5ZEX7|D5ZEX7_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|D5Z2C4|D5Z2C4_MYCTU Tax_Id=537209 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium tuberculosis GM 1503] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|D5YQK1|D5YQK1_MYCTU Tax_Id=515616 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium tuberculosis 02_1987] Length = 219 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 66 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 125 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 126 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 177 >tr|D5YE63|D5YE63_MYCTU Tax_Id=520140 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium tuberculosis EAS054] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|D5Y2L2|D5Y2L2_MYCTU Tax_Id=520141 SubName: Full=RNA polymerase sigma-70 factor;[Mycobacterium tuberculosis T85] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|D5XSJ0|D5XSJ0_MYCTU Tax_Id=515617 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T92] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|A4KGE7|A4KGE7_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 154 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 1 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 60 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 61 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 112 >tr|A2VHC2|A2VHC2_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 193 Score = 179 bits (455), Expect = 8e-44 Identities = 90/112 (80%), Positives = 100/112 (89%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QFASQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 40 MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 99 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 100 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 151 >tr|Q9CCA5|Q9CCA5_MYCLE Tax_Id=1769 SubName: Full=Putative uncharacterized protein ML1077;[Mycobacterium leprae] Length = 139 Score = 178 bits (451), Expect = 2e-43 Identities = 91/138 (65%), Positives = 107/138 (77%), Gaps = 7/138 (5%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 MAD G VFRR FSWLP+QFASQ+DAPVGAPR+FGSTEHLSVEAIAAFVDGELRM+AHLRA Sbjct: 2 MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSE---- 116 AHH+SLC +CAAEVD QS+ R ALR+S PI IP++L G+L+ IP +P+ T VSE Sbjct: 62 AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121 Query: 117 ---QAKFADDPTRGRRKR 131 +F D R + KR Sbjct: 122 GSVSDRFVDGVAREQGKR 139 >tr|B8ZQZ3|B8ZQZ3_MYCLB Tax_Id=561304 SubName: Full=Putative uncharacterized protein;[Mycobacterium leprae] Length = 139 Score = 178 bits (451), Expect = 2e-43 Identities = 91/138 (65%), Positives = 107/138 (77%), Gaps = 7/138 (5%) Query: 1 MADPGHVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRA 60 MAD G VFRR FSWLP+QFASQ+DAPVGAPR+FGSTEHLSVEAIAAFVDGELRM+AHLRA Sbjct: 2 MADRGQVFRRVFSWLPAQFASQNDAPVGAPRRFGSTEHLSVEAIAAFVDGELRMNAHLRA 61 Query: 61 AHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDVSE---- 116 AHH+SLC +CAAEVD QS+ R ALR+S PI IP++L G+L+ IP +P+ T VSE Sbjct: 62 AHHISLCAQCAAEVDDQSRTRAALRDSHPIRIPSTLFGLLTAIPRCSPDYTSPVSEPFSE 121 Query: 117 ---QAKFADDPTRGRRKR 131 +F D R + KR Sbjct: 122 GSVSDRFVDGVAREQGKR 139 >tr|Q8VK50|Q8VK50_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 219 Score = 178 bits (451), Expect = 2e-43 Identities = 89/112 (79%), Positives = 99/112 (88%), Gaps = 3/112 (2%) Query: 1 MADPG---HVFRRAFSWLPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRMSAH 57 MADPG HVFRRAFSWLP+QF SQSDAPVGAPRQF STEHLS+EAIAAFVDGELRM+AH Sbjct: 66 MADPGSVGHVFRRAFSWLPAQFTSQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAH 125 Query: 58 LRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPE 109 LRAAHHLSLC +CAAEVD QS+AR ALR+S PI IP++LLG+LS+IP PE Sbjct: 126 LRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPE 177 >tr|B1MLM2|B1MLM2_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 147 Score = 162 bits (409), Expect = 2e-38 Identities = 94/148 (63%), Positives = 102/148 (68%), Gaps = 17/148 (11%) Query: 1 MADPGHVFRRAFSW------LPSQFASQSDAPVGAPRQFGSTEHLSVEAIAAFVDGELRM 54 M D G FRRAFS LPS FASQS APVGAPRQFGSTEHLS EAIAAFVDGELRM Sbjct: 1 MVDSGS-FRRAFSSFSSFSRLPSPFASQSGAPVGAPRQFGSTEHLSTEAIAAFVDGELRM 59 Query: 55 SAHLRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVTPDV 114 SAHLRAAHHLS+C ECA E+DAQ QARTALR+S I +P SLLG+LSQIPH +V P Sbjct: 60 SAHLRAAHHLSMCAECALEIDAQRQARTALRDSGAIRVPGSLLGLLSQIPHIPHDVAPPQ 119 Query: 115 SEQAKFADDP----------TRGRRKRR 132 + P +R RRKRR Sbjct: 120 PSAHEGELPPALGGDAVRPDSRARRKRR 147 >tr|C1AZL4|C1AZL4_RHOOB Tax_Id=632772 SubName: Full=Putative uncharacterized protein;[Rhodococcus opacus] Length = 120 Score = 118 bits (296), Expect = 2e-25 Identities = 58/75 (77%), Positives = 66/75 (88%) Query: 30 PRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAHHLSLCPECAAEVDAQSQARTALRESCP 89 PRQFGSTEHL+ EAIAAFVDGELRMSA+LRAAHHLS+C ECA EVD+Q QAR ALR S Sbjct: 7 PRQFGSTEHLASEAIAAFVDGELRMSAYLRAAHHLSICAECAFEVDSQQQARRALRRSGD 66 Query: 90 IAIPNSLLGMLSQIP 104 +A+P+ LLG+LSQIP Sbjct: 67 VAMPSGLLGLLSQIP 81 >tr|Q0S3Y1|Q0S3Y1_RHOSR Tax_Id=101510 SubName: Full=Putative uncharacterized protein;[Rhodococcus sp.] Length = 120 Score = 117 bits (293), Expect = 5e-25 Identities = 57/75 (76%), Positives = 66/75 (88%) Query: 30 PRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAHHLSLCPECAAEVDAQSQARTALRESCP 89 PRQFGSTEHL+ EAIAA+VDGELRMSA+LRAAHHLS+C ECA EVD+Q QAR ALR S Sbjct: 7 PRQFGSTEHLASEAIAAYVDGELRMSAYLRAAHHLSICAECAFEVDSQQQARRALRRSGD 66 Query: 90 IAIPNSLLGMLSQIP 104 +A+P+ LLG+LSQIP Sbjct: 67 VAMPSGLLGLLSQIP 81 >tr|C1A2N0|C1A2N0_RHOE4 Tax_Id=234621 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis] Length = 127 Score = 111 bits (278), Expect = 3e-23 Identities = 58/90 (64%), Positives = 68/90 (75%) Query: 29 APRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAHHLSLCPECAAEVDAQSQARTALRESC 88 A RQFGSTEHL+ EAIAA+VDGELRM A+LRA+HH+S+C ECAA VDAQ QAR ALR S Sbjct: 14 AHRQFGSTEHLASEAIAAYVDGELRMQAYLRASHHISICAECAAAVDAQQQARGALRRSG 73 Query: 89 PIAIPNSLLGMLSQIPHRTPEVTPDVSEQA 118 + +P SL+G+LSQIP T SE A Sbjct: 74 EMTMPLSLVGLLSQIPSCNSPTTGPNSENA 103 >tr|C3JTT4|C3JTT4_RHOER Tax_Id=596309 SubName: Full=RNA polymerase sigma-70 factor;[Rhodococcus erythropolis SK121] Length = 119 Score = 111 bits (278), Expect = 3e-23 Identities = 58/90 (64%), Positives = 68/90 (75%) Query: 29 APRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAHHLSLCPECAAEVDAQSQARTALRESC 88 A RQFGSTEHL+ EAIAA+VDGELRM A+LRA+HH+S+C ECAA VDAQ QAR ALR S Sbjct: 6 AHRQFGSTEHLASEAIAAYVDGELRMQAYLRASHHISICAECAAAVDAQQQARGALRRSG 65 Query: 89 PIAIPNSLLGMLSQIPHRTPEVTPDVSEQA 118 + +P SL+G+LSQIP T SE A Sbjct: 66 EMTMPLSLVGLLSQIPSCNSPTTGPNSENA 95 >tr|D5PWF3|D5PWF3_COREQ Tax_Id=525370 SubName: Full=Putative uncharacterized protein;[Rhodococcus equi ATCC 33707] Length = 125 Score = 110 bits (276), Expect = 4e-23 Identities = 54/80 (67%), Positives = 69/80 (86%), Gaps = 1/80 (1%) Query: 30 PRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAHHLSLCPECAAEVDAQSQARTALRESC- 88 PRQFGSTEHL+ EAIA++VDGELRM+A+LRA+ HL+LCP+CAAEV+AQ QAR ALR + Sbjct: 12 PRQFGSTEHLASEAIASYVDGELRMNAYLRASQHLALCPDCAAEVEAQQQARIALRRAAS 71 Query: 89 PIAIPNSLLGMLSQIPHRTP 108 +++P+SLLG+LSQIP P Sbjct: 72 EVSMPSSLLGLLSQIPRCHP 91 >tr|Q5YQF9|Q5YQF9_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 159 Score = 109 bits (273), Expect = 1e-22 Identities = 52/77 (67%), Positives = 64/77 (83%) Query: 28 GAPRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAHHLSLCPECAAEVDAQSQARTALRES 87 G P +F TEHL+ EA+ A+VDGELRM+A+LRAAHH+S+CPECAAEV+AQ QAR ALR+S Sbjct: 40 GRPPRFAPTEHLASEAVVAYVDGELRMNAYLRAAHHISVCPECAAEVEAQQQARIALRQS 99 Query: 88 CPIAIPNSLLGMLSQIP 104 PIA+P SL LS+IP Sbjct: 100 GPIAVPRSLHDSLSRIP 116 >tr|D5UVB0|D5UVB0_TSUPA Tax_Id=521096 SubName: Full=Putative uncharacterized protein;[Tsukamurella paurometabola DSM 20162] Length = 129 Score = 105 bits (262), Expect = 2e-21 Identities = 50/75 (66%), Positives = 59/75 (78%) Query: 30 PRQFGSTEHLSVEAIAAFVDGELRMSAHLRAAHHLSLCPECAAEVDAQSQARTALRESCP 89 P +F STEHL+ EA+ AFVDGELRM+AHLRA H++ CP CAAEVDAQ Q R LRES Sbjct: 16 PGEFSSTEHLAFEAVVAFVDGELRMNAHLRAGTHIAQCPMCAAEVDAQRQVRNTLRESGE 75 Query: 90 IAIPNSLLGMLSQIP 104 I++PN LLG L+QIP Sbjct: 76 ISVPNRLLGQLAQIP 90 >tr|D0L8U7|D0L8U7_GORB4 Tax_Id=526226 SubName: Full=Putative uncharacterized protein;[Gordonia bronchialis] Length = 91 Score = 77.8 bits (190), Expect = 4e-13 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 9/88 (10%) Query: 54 MSAHLRAAHHLSLCPECAAEVDAQSQARTALRESCPIAIPNSLLGMLSQIPHRTPEVT-- 111 M+AH+RA HHL+LCPEC A VDAQ+ AR LRES ++IP+SLL L+QIP R ++T Sbjct: 1 MTAHMRATHHLALCPECVAAVDAQTSARARLRESGRVSIPDSLLSQLTQIPTREIDMTSG 60 Query: 112 -------PDVSEQAKFADDPTRGRRKRR 132 P + TRGR RR Sbjct: 61 DAATDRMPGAFPASSIPAPMTRGRMTRR 88 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.320 0.130 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,069,739,160 Number of extensions: 36418127 Number of successful extensions: 90092 Number of sequences better than 10.0: 191 Number of HSP's gapped: 90838 Number of HSP's successfully gapped: 191 Length of query: 132 Length of database: 4,236,830,644 Length adjustment: 97 Effective length of query: 35 Effective length of database: 3,023,567,836 Effective search space: 105824874260 Effective search space used: 105824874260 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 75 (33.5 bits)