BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_5151 (202 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R2L0|A0R2L0_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 114 5e-24 tr|A4TD05|A4TD05_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 45 0.007 tr|A1T862|A1T862_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 42 0.033 tr|Q7U0I4|Q7U0I4_MYCBO Tax_Id=1765 SubName: Full=CONSERVED HYPOT... 40 0.12 tr|O06556|O06556_MYCTU Tax_Id=1773 SubName: Full=CONSERVED HYPOT... 40 0.12 tr|C6DV00|C6DV00_MYCTK Tax_Id=478434 SubName: Full=Conserved ala... 40 0.12 tr|C1AMF2|C1AMF2_MYCBT Tax_Id=561275 SubName: Full=Hypothetical ... 40 0.12 tr|A5WLI6|A5WLI6_MYCTF Tax_Id=336982 SubName: Full=Conserved ala... 40 0.12 tr|A5U1K6|A5U1K6_MYCTA Tax_Id=419947 SubName: Full=Conserved hyp... 40 0.12 tr|A1KHU8|A1KHU8_MYCBP Tax_Id=410289 SubName: Full=Conserved hyp... 40 0.12 tr|D6G079|D6G079_MYCTU Tax_Id=478435 SubName: Full=Conserved ala... 40 0.12 tr|D6FQL0|D6FQL0_MYCTU Tax_Id=611304 SubName: Full=Predicted pro... 40 0.12 tr|D6FFZ8|D6FFZ8_MYCTU Tax_Id=611303 SubName: Full=Conserved ala... 40 0.12 tr|D6F3A8|D6F3A8_MYCTU Tax_Id=611302 SubName: Full=Conserved ala... 40 0.12 tr|D5ZER3|D5ZER3_MYCTU Tax_Id=537210 SubName: Full=Conserved ala... 40 0.12 tr|D5Z260|D5Z260_MYCTU Tax_Id=537209 SubName: Full=Conserved hyp... 40 0.12 tr|D5YQD5|D5YQD5_MYCTU Tax_Id=515616 SubName: Full=Putative unch... 40 0.12 tr|D5Y2E5|D5Y2E5_MYCTU Tax_Id=520141 SubName: Full=Putative unch... 40 0.12 tr|A2VH66|A2VH66_MYCTU Tax_Id=348776 SubName: Full=Conserved hyp... 40 0.12 tr|Q9CBW9|Q9CBW9_MYCLE Tax_Id=1769 SubName: Full=Conserved hypot... 36 3.1 tr|B8ZRQ8|B8ZRQ8_MYCLB Tax_Id=561304 SubName: Full=Conserved hyp... 36 3.1 tr|Q1B7N1|Q1B7N1_MYCSS Tax_Id=164756 SubName: Full=Putative unch... 35 5.2 tr|A3Q0W3|A3Q0W3_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 35 5.2 >tr|A0R2L0|A0R2L0_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 202 Score = 114 bits (286), Expect = 5e-24 Identities = 73/155 (47%), Positives = 73/155 (47%) Query: 1 MKFTWKAISTGMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAGVPGAAPQL 60 MKFTWKAISTGMI QLAGVPGAAPQL Sbjct: 1 MKFTWKAISTGMIAAAGALPVAVALSGAANAEPAPVPPAPMPNLPVVNQLAGVPGAAPQL 60 Query: 61 LQGVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGVASLV 120 LQGVAS NGVASLV Sbjct: 61 LQGVASALTGTPAQAPAPQPTAQATLTLPQAPATAPATVPAATGTAPAVTPAANGVASLV 120 Query: 121 PSAEVTIPQVPGMPIPLPQTVNIPGDLASLAPIGS 155 PSAEVTIPQVPGMPIPLPQTVNIPGDLASLAPIGS Sbjct: 121 PSAEVTIPQVPGMPIPLPQTVNIPGDLASLAPIGS 155 >tr|A4TD05|A4TD05_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Mycobacterium gilvum] Length = 1259 Score = 44.7 bits (104), Expect = 0.007 Identities = 17/33 (51%), Positives = 25/33 (75%) Query: 115 GVASLVPSAEVTIPQVPGMPIPLPQTVNIPGDL 147 G+++LV +TIP +PG+P+PLP TV +P DL Sbjct: 1184 GLSNLVSPPSLTIPSIPGLPVPLPNTVPVPSDL 1216 >tr|A1T862|A1T862_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 1155 Score = 42.4 bits (98), Expect = 0.033 Identities = 16/33 (48%), Positives = 24/33 (72%) Query: 115 GVASLVPSAEVTIPQVPGMPIPLPQTVNIPGDL 147 G+++LV +TIP +PG+P+PLP V +P DL Sbjct: 1079 GLSNLVSPPSLTIPSIPGLPVPLPNEVPVPSDL 1111 >tr|Q7U0I4|Q7U0I4_MYCBO Tax_Id=1765 SubName: Full=CONSERVED HYPOTHETICAL ALA-, PRO-RICH PROTEIN;[Mycobacterium bovis] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|O06556|O06556_MYCTU Tax_Id=1773 SubName: Full=CONSERVED HYPOTHETICAL ALA-, PRO-RICH PROTEIN;[Mycobacterium tuberculosis] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|C6DV00|C6DV00_MYCTK Tax_Id=478434 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|C1AMF2|C1AMF2_MYCBT Tax_Id=561275 SubName: Full=Hypothetical ala-, pro-rich protein;[Mycobacterium bovis] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|A5WLI6|A5WLI6_MYCTF Tax_Id=336982 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|A5U1K6|A5U1K6_MYCTA Tax_Id=419947 SubName: Full=Conserved hypothetical alanine and proline rich protein;[Mycobacterium tuberculosis] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|A1KHU8|A1KHU8_MYCBP Tax_Id=410289 SubName: Full=Conserved hypothetical ala-, pro-rich protein;[Mycobacterium bovis] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|D6G079|D6G079_MYCTU Tax_Id=478435 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis KZN 605] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|D6FQL0|D6FQL0_MYCTU Tax_Id=611304 SubName: Full=Predicted protein;[Mycobacterium tuberculosis K85] Length = 199 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 135 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 166 >tr|D6FFZ8|D6FFZ8_MYCTU Tax_Id=611303 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis CPHL_A] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|D6F3A8|D6F3A8_MYCTU Tax_Id=611302 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis T46] Length = 234 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 170 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 201 >tr|D5ZER3|D5ZER3_MYCTU Tax_Id=537210 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis T17] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|D5Z260|D5Z260_MYCTU Tax_Id=537209 SubName: Full=Conserved hypothetical ala-, pro-rich protein;[Mycobacterium tuberculosis GM 1503] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|D5YQD5|D5YQD5_MYCTU Tax_Id=515616 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis 02_1987] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|D5Y2E5|D5Y2E5_MYCTU Tax_Id=520141 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T85] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|A2VH66|A2VH66_MYCTU Tax_Id=348776 SubName: Full=Conserved hypothetical ala-, pro-rich protein;[Mycobacterium tuberculosis C] Length = 227 Score = 40.4 bits (93), Expect = 0.12 Identities = 16/32 (50%), Positives = 26/32 (81%) Query: 120 VPSAEVTIPQVPGMPIPLPQTVNIPGDLASLA 151 VPSA+V +PQ+P +P+ +PQ +++P DL +LA Sbjct: 163 VPSAKVDLPQLPYLPLQVPQQLSLPADLPALA 194 >tr|Q9CBW9|Q9CBW9_MYCLE Tax_Id=1769 SubName: Full=Conserved hypothetical Proline rich protein;[Mycobacterium leprae] Length = 182 Score = 35.8 bits (81), Expect = 3.1 Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 121 PSAEVTIPQVPGMPIPLPQTVNIPGDLASLAPIGS 155 P A V +P +P +P+ +P +++PGDL +LA S Sbjct: 132 PQARVDMPAMPFLPVSVPPQISLPGDLQALASSAS 166 >tr|B8ZRQ8|B8ZRQ8_MYCLB Tax_Id=561304 SubName: Full=Conserved hypothetical Proline rich protein;[Mycobacterium leprae] Length = 180 Score = 35.8 bits (81), Expect = 3.1 Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 121 PSAEVTIPQVPGMPIPLPQTVNIPGDLASLAPIGS 155 P A V +P +P +P+ +P +++PGDL +LA S Sbjct: 130 PQARVDMPAMPFLPVSVPPQISLPGDLQALASSAS 164 >tr|Q1B7N1|Q1B7N1_MYCSS Tax_Id=164756 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 771 Score = 35.0 bits (79), Expect = 5.2 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Query: 114 NGVASLVPSAEVTIPQVPGMPIPLPQTVNIPGD 146 NG +P+ +V PQ+PG+P+PLP + P D Sbjct: 707 NGPWDFIPTIQV--PQIPGLPVPLPTEIGPPSD 737 >tr|A3Q0W3|A3Q0W3_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Mycobacterium sp.] Length = 946 Score = 35.0 bits (79), Expect = 5.2 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Query: 114 NGVASLVPSAEVTIPQVPGMPIPLPQTVNIPGD 146 NG +P+ +V PQ+PG+P+PLP + P D Sbjct: 882 NGPWDFIPTIQV--PQIPGLPVPLPTEIGPPSD 912 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.315 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 591,273,034 Number of extensions: 11771803 Number of successful extensions: 34437 Number of sequences better than 10.0: 23 Number of HSP's gapped: 34566 Number of HSP's successfully gapped: 24 Length of query: 202 Length of database: 4,236,830,644 Length adjustment: 131 Effective length of query: 71 Effective length of database: 2,598,300,460 Effective search space: 184479332660 Effective search space used: 184479332660 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 77 (34.3 bits)