BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_5518
         (299 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0R3L7|A0R3L7_MYCS2 Tax_Id=246196 SubName: Full=Antigen 34 kD...   175   7e-42
tr|Q1B3V7|Q1B3V7_MYCSS Tax_Id=164756 SubName: Full=Putative unch...    51   2e-04
tr|A3Q5P0|A3Q5P0_MYCSJ Tax_Id=164757 SubName: Full=Putative unch...    51   2e-04
tr|A1UL91|A1UL91_MYCSK Tax_Id=189918 SubName: Full=Putative unch...    51   2e-04
tr|C1AWW9|C1AWW9_RHOOB Tax_Id=632772 SubName: Full=Hypothetical ...    48   0.001
tr|Q0S530|Q0S530_RHOSR Tax_Id=101510 SubName: Full=Possible 34 k...    47   0.003
tr|A1TEN2|A1TEN2_MYCVP Tax_Id=350058 SubName: Full=Putative unch...    47   0.003
tr|A4T6V1|A4T6V1_MYCGI Tax_Id=350054 SubName: Full=Putative unch...    46   0.007
tr|Q9CD70|Q9CD70_MYCLE Tax_Id=1769 SubName: Full=34 kDa antigen;...    45   0.011
tr|B8ZU02|B8ZU02_MYCLB Tax_Id=561304 SubName: Full=34 kDa antige...    45   0.011
tr|Q9S371|Q9S371_MYCLE Tax_Id=1769 (MLCB373.06)SubName: Full=Hyp...    45   0.011
tr|D5PF29|D5PF29_9MYCO Tax_Id=525368 SubName: Full=Antigenic pro...    45   0.011
sp|Q04959|34KD_MYCPA Tax_Id=1770 RecName: Full=34 kDa antigenic ...    45   0.015
tr|C1A3E9|C1A3E9_RHOE4 Tax_Id=234621 SubName: Full=Conserved hyp...    45   0.015
tr|C3JX87|C3JX87_RHOER Tax_Id=596309 SubName: Full=Antigen 34 kD...    45   0.015
tr|A3RL31|A3RL31_MYCPA Tax_Id=1770 SubName: Full=29.6 kDa protei...    45   0.015
tr|A0QBP4|A0QBP4_MYCA1 Tax_Id=243243 SubName: Full=34 kDa antige...    43   0.043
tr|O87894|O87894_MYCLE Tax_Id=1769 SubName: Full=34 kDa antigen;...    43   0.043
tr|C6WLS1|C6WLS1_ACTMD Tax_Id=446462 SubName: Full=Putative unch...    37   2.3  
sp|P65637|34KD_MYCTU Tax_Id=1773 RecName: Full=34 kDa antigenic ...    37   4.0  
sp|P65638|34KD_MYCBO Tax_Id=1765 RecName: Full=34 kDa antigenic ...    37   4.0  
tr|C6DW02|C6DW02_MYCTK Tax_Id=478434 SubName: Full=Conserved mem...    37   4.0  
tr|C1ALU0|C1ALU0_MYCBT Tax_Id=561275 SubName: Full=Putative tran...    37   4.0  
tr|A5WKX6|A5WKX6_MYCTF Tax_Id=336982 SubName: Full=Conserved tra...    37   4.0  
tr|A5U0Z4|A5U0Z4_MYCTA Tax_Id=419947 SubName: Full=Putative cons...    37   4.0  
tr|A1KH88|A1KH88_MYCBP Tax_Id=410289 SubName: Full=Probable cons...    37   4.0  
tr|D6G171|D6G171_MYCTU Tax_Id=478435 SubName: Full=Conserved mem...    37   4.0  
tr|D6FPJ6|D6FPJ6_MYCTU Tax_Id=611304 SubName: Full=Transmembrane...    37   4.0  
tr|D6FFC7|D6FFC7_MYCTU Tax_Id=611303 SubName: Full=Conserved mem...    37   4.0  
tr|D6F2N8|D6F2N8_MYCTU Tax_Id=611302 SubName: Full=Conserved mem...    37   4.0  
tr|D5ZE29|D5ZE29_MYCTU Tax_Id=537210 SubName: Full=Conserved mem...    37   4.0  
tr|D5Z1J6|D5Z1J6_MYCTU Tax_Id=537209 SubName: Full=Putative unch...    37   4.0  
tr|D5YPQ6|D5YPQ6_MYCTU Tax_Id=515616 SubName: Full=Putative unch...    37   4.0  
tr|D5YDD1|D5YDD1_MYCTU Tax_Id=520140 SubName: Full=Predicted pro...    37   4.0  
tr|D5Y1T1|D5Y1T1_MYCTU Tax_Id=520141 SubName: Full=Predicted pro...    37   4.0  
tr|D5XRQ4|D5XRQ4_MYCTU Tax_Id=515617 SubName: Full=Conserved mem...    37   4.0  
tr|A4KFQ3|A4KFQ3_MYCTU Tax_Id=395095 SubName: Full=Conserved tra...    37   4.0  
tr|A2VGP9|A2VGP9_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    37   4.0  

>tr|A0R3L7|A0R3L7_MYCS2 Tax_Id=246196 SubName: Full=Antigen 34
           kDa;[Mycobacterium smegmatis]
          Length = 299

 Score =  175 bits (443), Expect = 7e-42
 Identities = 97/136 (71%), Positives = 97/136 (71%)

Query: 20  YGATQPFGKPAETAPAGESSLPQXXXXXXXXXXXXXYFVSYGIEDAQFXXXXXXXXXXXX 79
           YGATQPFGKPAETAPAGESSLPQ             YFVSYGIEDAQF            
Sbjct: 20  YGATQPFGKPAETAPAGESSLPQILLGVAAAAGLIAYFVSYGIEDAQFAVGAPIVQVIVV 79

Query: 80  XXXXXXXXXXXXXXPKQKNHAGVASVLALVAFLQSVYLVILAGSDSGWAFITILVLTLIQ 139
                         PKQKNHAGVASVLALVAFLQSVYLVILAGSDSGWAFITILVLTLIQ
Sbjct: 80  AALAGALLAGVSLLPKQKNHAGVASVLALVAFLQSVYLVILAGSDSGWAFITILVLTLIQ 139

Query: 140 AGAALTVLLFDSGILT 155
           AGAALTVLLFDSGILT
Sbjct: 140 AGAALTVLLFDSGILT 155


>tr|Q1B3V7|Q1B3V7_MYCSS Tax_Id=164756 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 295

 Score = 50.8 bits (120), Expect = 2e-04
 Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 95  KQKNHAGVASVLALVAFLQSVYLVILAGSDS--GWAFITILVLTLIQAGAALTVLLFDSG 152
           K + +  +A+VL+++A L  +  +I   S++  GWA   ++VL+L+QAG+A+  LLFD+G
Sbjct: 109 KGRTYVAIAAVLSVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVAALLFDTG 168

Query: 153 ILT 155
           +LT
Sbjct: 169 VLT 171


>tr|A3Q5P0|A3Q5P0_MYCSJ Tax_Id=164757 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 295

 Score = 50.8 bits (120), Expect = 2e-04
 Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 95  KQKNHAGVASVLALVAFLQSVYLVILAGSDS--GWAFITILVLTLIQAGAALTVLLFDSG 152
           K + +  +A+VL+++A L  +  +I   S++  GWA   ++VL+L+QAG+A+  LLFD+G
Sbjct: 109 KGRTYVAIAAVLSVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVAALLFDTG 168

Query: 153 ILT 155
           +LT
Sbjct: 169 VLT 171


>tr|A1UL91|A1UL91_MYCSK Tax_Id=189918 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium sp.]
          Length = 295

 Score = 50.8 bits (120), Expect = 2e-04
 Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 95  KQKNHAGVASVLALVAFLQSVYLVILAGSDS--GWAFITILVLTLIQAGAALTVLLFDSG 152
           K + +  +A+VL+++A L  +  +I   S++  GWA   ++VL+L+QAG+A+  LLFD+G
Sbjct: 109 KGRTYVAIAAVLSVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVAALLFDTG 168

Query: 153 ILT 155
           +LT
Sbjct: 169 VLT 171


>tr|C1AWW9|C1AWW9_RHOOB Tax_Id=632772 SubName: Full=Hypothetical
           membrane protein;[Rhodococcus opacus]
          Length = 353

 Score = 48.1 bits (113), Expect = 0.001
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILAGSDSGWAFITILVLTLIQAGAALTVLLFDSGI 153
           PKQ ++AG A+  ++  ++ ++++ +   +DSGW  I ILVL  IQ+  A+  +LFD G+
Sbjct: 82  PKQ-SYAGAAAAASVAGWVVALFVFLNVDADSGWGAILILVLGFIQSAVAVAAVLFDIGV 140

Query: 154 L 154
           L
Sbjct: 141 L 141


>tr|Q0S530|Q0S530_RHOSR Tax_Id=101510 SubName: Full=Possible 34 kDa
           antigenic protein;[Rhodococcus sp.]
          Length = 356

 Score = 47.0 bits (110), Expect = 0.003
 Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILAGSDSGWAFITILVLTLIQAGAALTVLLFDSGI 153
           PKQ ++AG A+  ++  ++ ++++ +   +DSGW  I ILVL  IQ+  A+   LFD G+
Sbjct: 82  PKQ-SYAGAAAAASVAGWVVALFVFLNVDADSGWGAILILVLGFIQSAVAVAATLFDIGL 140

Query: 154 L 154
           L
Sbjct: 141 L 141


>tr|A1TEN2|A1TEN2_MYCVP Tax_Id=350058 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium vanbaalenii]
          Length = 281

 Score = 47.0 bits (110), Expect = 0.003
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILAGSDS--GWAFITILVLTLIQAGAALTVLLFDS 151
           P+Q N   VA+V A++A L  V  +I   +++  GW    ++   L+QA  ++ VLLFD+
Sbjct: 108 PRQNNFTAVAAVAAVLALLLVVAEIINKPAEASIGWGLYLVIAFILLQAAVSVVVLLFDA 167

Query: 152 GILT 155
           GI+T
Sbjct: 168 GIIT 171


>tr|A4T6V1|A4T6V1_MYCGI Tax_Id=350054 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium gilvum]
          Length = 296

 Score = 45.8 bits (107), Expect = 0.007
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVI--LAGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           P+Q     + +VL+L+ FL ++  +     G+  GW    ++  TL+QA  A+  LLFDS
Sbjct: 105 PRQTPRPALVAVLSLLGFLIALATLFDGFEGTTVGWGVYLVIAFTLLQAAVAVVCLLFDS 164

Query: 152 GILT 155
           GI+T
Sbjct: 165 GIIT 168


>tr|Q9CD70|Q9CD70_MYCLE Tax_Id=1769 SubName: Full=34 kDa
           antigen;[Mycobacterium leprae]
          Length = 314

 Score = 45.1 bits (105), Expect = 0.011
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K+ AGV   +A++  L ++  +I   AG   GWA   ILV +++QA AA+  LL ++
Sbjct: 114 PKAKSSAGVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEA 173

Query: 152 GILT 155
           GI+T
Sbjct: 174 GIIT 177


>tr|B8ZU02|B8ZU02_MYCLB Tax_Id=561304 SubName: Full=34 kDa
           antigen;[Mycobacterium leprae]
          Length = 314

 Score = 45.1 bits (105), Expect = 0.011
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K+ AGV   +A++  L ++  +I   AG   GWA   ILV +++QA AA+  LL ++
Sbjct: 114 PKAKSSAGVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEA 173

Query: 152 GILT 155
           GI+T
Sbjct: 174 GIIT 177


>tr|Q9S371|Q9S371_MYCLE Tax_Id=1769 (MLCB373.06)SubName:
           Full=Hypothetical membrane protein
           MLCB373.06;[Mycobacterium leprae]
          Length = 297

 Score = 45.1 bits (105), Expect = 0.011
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K+ AGV   +A++  L ++  +I   AG   GWA   ILV +++QA AA+  LL ++
Sbjct: 97  PKAKSSAGVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEA 156

Query: 152 GILT 155
           GI+T
Sbjct: 157 GIIT 160


>tr|D5PF29|D5PF29_9MYCO Tax_Id=525368 SubName: Full=Antigenic
           protein;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 294

 Score = 45.1 bits (105), Expect = 0.011
 Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K++AG+ +V+A++  L ++   I   AG   GWA   ++  +++QA AA+ V+L D+
Sbjct: 96  PKAKSYAGIVAVIAVLGALLAITETINLPAGFAIGWAMWPLVACSVLQAIAAVVVVLLDA 155

Query: 152 GILT 155
           G++T
Sbjct: 156 GVIT 159


>sp|Q04959|34KD_MYCPA Tax_Id=1770 RecName: Full=34 kDa antigenic
           protein;[Mycobacterium paratuberculosis]
          Length = 298

 Score = 44.7 bits (104), Expect = 0.015
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K++ GV +V+A++A L ++   I   AG   GWA   ++   ++QA AA+ V+L D+
Sbjct: 97  PKAKSYVGVVAVVAVLAALLAITETINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDA 156

Query: 152 GILT 155
           G++T
Sbjct: 157 GVIT 160


>tr|C1A3E9|C1A3E9_RHOE4 Tax_Id=234621 SubName: Full=Conserved
           hypothetical membrane protein;[Rhodococcus erythropolis]
          Length = 346

 Score = 44.7 bits (104), Expect = 0.015
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILAGSDS------GWAFITILVLTLIQAGAALTVL 147
           PKQ ++AG+A+ L L  F   V+     G+        GW  I +L+L+ +Q   A+  L
Sbjct: 92  PKQ-SYAGIAAALTLTGFFALVFAAFSVGTSDYVDISLGWGLIIVLILSFVQTVVAVAAL 150

Query: 148 LFDSGIL 154
           LF+ GIL
Sbjct: 151 LFEIGIL 157


>tr|C3JX87|C3JX87_RHOER Tax_Id=596309 SubName: Full=Antigen 34
           kDa;[Rhodococcus erythropolis SK121]
          Length = 347

 Score = 44.7 bits (104), Expect = 0.015
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILAGSDS------GWAFITILVLTLIQAGAALTVL 147
           PKQ ++AG+A+ L L  F   V+     G+        GW  I +L+L+ +Q   A+  L
Sbjct: 92  PKQ-SYAGIAAALTLTGFFALVFAAFSVGTSDYVDISLGWGLIIVLILSFVQTVVAVAAL 150

Query: 148 LFDSGIL 154
           LF+ GIL
Sbjct: 151 LFEIGIL 157


>tr|A3RL31|A3RL31_MYCPA Tax_Id=1770 SubName: Full=29.6 kDa
           protein;[Mycobacterium paratuberculosis]
          Length = 298

 Score = 44.7 bits (104), Expect = 0.015
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K++ GV +V+A++A L ++   I   AG   GWA   ++   ++QA AA+ V+L D+
Sbjct: 97  PKAKSYVGVVAVVAVLAALLAITETINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDA 156

Query: 152 GILT 155
           G++T
Sbjct: 157 GVIT 160


>tr|A0QBP4|A0QBP4_MYCA1 Tax_Id=243243 SubName: Full=34 kDa antigenic
           protein;[Mycobacterium avium]
          Length = 302

 Score = 43.1 bits (100), Expect = 0.043
 Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K++ GV +V+A++  L ++   I   AG   GWA   ++   ++QA AA+ V+L D+
Sbjct: 97  PKAKSYVGVVAVVAVLGALLAITETINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDA 156

Query: 152 GILT 155
           G++T
Sbjct: 157 GVIT 160


>tr|O87894|O87894_MYCLE Tax_Id=1769 SubName: Full=34 kDa antigen;
           Flags: Precursor;[Mycobacterium leprae]
          Length = 336

 Score = 43.1 bits (100), Expect = 0.043
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVIL--AGSDSGWAFITILVLTLIQAGAALTVLLFDS 151
           PK K+ AGV   +A++  L ++  +I   AG   GWA   ILV +++QA AA+  LL ++
Sbjct: 136 PKAKSSAGVVGAIAVLGALLAISEMINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEA 195

Query: 152 GIL 154
           GI+
Sbjct: 196 GII 198


>tr|C6WLS1|C6WLS1_ACTMD Tax_Id=446462 SubName: Full=Putative
           uncharacterized protein;[Actinosynnema mirum]
          Length = 233

 Score = 37.4 bits (85), Expect = 2.3
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query: 102 VASVLALVAFLQSVYLVILAGSDSGWAFITILVLTLIQAGAALTVLLFDSGIL 154
           VA+VL++VA LQ++ + + A   S    I +L+L L+QA A +  LL + G++
Sbjct: 75  VAAVLSVVAALQALQVTVKAPLGSSVMQIIVLILALLQAAAIVFALLLELGVV 127


>sp|P65637|34KD_MYCTU Tax_Id=1773 RecName: Full=34 kDa antigenic
           protein homolog;[Mycobacterium tuberculosis]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>sp|P65638|34KD_MYCBO Tax_Id=1765 RecName: Full=34 kDa antigenic
           protein homolog;[Mycobacterium bovis]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|C6DW02|C6DW02_MYCTK Tax_Id=478434 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|C1ALU0|C1ALU0_MYCBT Tax_Id=561275 SubName: Full=Putative
           transmembrane protein;[Mycobacterium bovis]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|A5WKX6|A5WKX6_MYCTF Tax_Id=336982 SubName: Full=Conserved
           transmembrane protein;[Mycobacterium tuberculosis]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|A5U0Z4|A5U0Z4_MYCTA Tax_Id=419947 SubName: Full=Putative
           conserved transmembrane protein;[Mycobacterium
           tuberculosis]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|A1KH88|A1KH88_MYCBP Tax_Id=410289 SubName: Full=Probable
           conserved transmembrane protein;[Mycobacterium bovis]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D6G171|D6G171_MYCTU Tax_Id=478435 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis KZN 605]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D6FPJ6|D6FPJ6_MYCTU Tax_Id=611304 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis K85]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D6FFC7|D6FFC7_MYCTU Tax_Id=611303 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis CPHL_A]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D6F2N8|D6F2N8_MYCTU Tax_Id=611302 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis T46]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D5ZE29|D5ZE29_MYCTU Tax_Id=537210 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis T17]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D5Z1J6|D5Z1J6_MYCTU Tax_Id=537209 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis GM
           1503]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D5YPQ6|D5YPQ6_MYCTU Tax_Id=515616 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis
           02_1987]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D5YDD1|D5YDD1_MYCTU Tax_Id=520140 SubName: Full=Predicted
           protein;[Mycobacterium tuberculosis EAS054]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D5Y1T1|D5Y1T1_MYCTU Tax_Id=520141 SubName: Full=Predicted
           protein;[Mycobacterium tuberculosis T85]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|D5XRQ4|D5XRQ4_MYCTU Tax_Id=515617 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis T92]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|A4KFQ3|A4KFQ3_MYCTU Tax_Id=395095 SubName: Full=Conserved
           transmembrane protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


>tr|A2VGP9|A2VGP9_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 303

 Score = 36.6 bits (83), Expect = 4.0
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 94  PKQKNHAGVASVLALVAFLQSVYLVILA------GSDSGWAFITILVLTLIQAGAALTVL 147
           PK K+H  V +VL ++     V+L++ A         +GWA   +L   + QA AA+  L
Sbjct: 97  PKAKSHVTVVAVLGVL----GVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLAL 152

Query: 148 LFDSGILT 155
           L ++G +T
Sbjct: 153 LVETGAIT 160


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.319    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 785,412,461
Number of extensions: 18103225
Number of successful extensions: 74145
Number of sequences better than 10.0: 38
Number of HSP's gapped: 74792
Number of HSP's successfully gapped: 38
Length of query: 299
Length of database: 4,236,830,644
Length adjustment: 137
Effective length of query: 162
Effective length of database: 2,523,253,276
Effective search space: 408767030712
Effective search space used: 408767030712
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)