BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_5688
         (143 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0R433|A0R433_MYCS2 Tax_Id=246196 SubName: Full=Regulatory pr...   243   5e-63
tr|Q1B3G2|Q1B3G2_MYCSS Tax_Id=164756 SubName: Full=Transcription...   172   1e-41
tr|A3Q639|A3Q639_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   172   1e-41
tr|A1ULN8|A1ULN8_MYCSK Tax_Id=189918 SubName: Full=Transcription...   172   1e-41
tr|Q742L6|Q742L6_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   159   1e-37
tr|D5PEW0|D5PEW0_9MYCO Tax_Id=525368 SubName: Full=Regulatory pr...   152   1e-35
tr|A0PKY6|A0PKY6_MYCUA Tax_Id=362242 SubName: Full=Transcription...   152   1e-35
tr|B1MJ17|B1MJ17_MYCA9 Tax_Id=561007 SubName: Full=Putative HTH-...   149   1e-34
sp|P67746|Y904_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized H...   146   7e-34
sp|P67745|Y880_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized H...   146   7e-34
tr|C6DWL5|C6DWL5_MYCTK Tax_Id=478434 SubName: Full=Transcription...   146   7e-34
tr|C1ALL4|C1ALL4_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   146   7e-34
tr|A5WKQ1|A5WKQ1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   146   7e-34
tr|A1KH12|A1KH12_MYCBP Tax_Id=410289 SubName: Full=Possible tran...   146   7e-34
tr|D6G1S8|D6G1S8_MYCTU Tax_Id=478435 SubName: Full=Transcription...   146   7e-34
tr|D6FNY2|D6FNY2_MYCTU Tax_Id=611304 SubName: Full=Transcription...   146   7e-34
tr|D6FF46|D6FF46_MYCTU Tax_Id=611303 SubName: Full=Transcription...   146   7e-34
tr|D6F2F8|D6F2F8_MYCTU Tax_Id=611302 SubName: Full=Transcription...   146   7e-34
tr|D5Z1B8|D5Z1B8_MYCTU Tax_Id=537209 SubName: Full=SpoU rRNA met...   146   7e-34
tr|D5YPI1|D5YPI1_MYCTU Tax_Id=515616 SubName: Full=MarR family t...   146   7e-34
tr|D5YD56|D5YD56_MYCTU Tax_Id=520140 SubName: Full=SpoU rRNA met...   146   7e-34
tr|D5Y1K7|D5Y1K7_MYCTU Tax_Id=520141 SubName: Full=MarR family t...   146   7e-34
tr|D5XRH8|D5XRH8_MYCTU Tax_Id=515617 SubName: Full=Transcription...   146   7e-34
tr|A4KFI5|A4KFI5_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   146   7e-34
tr|A2VGH6|A2VGH6_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   146   7e-34
tr|A5U0R8|A5U0R8_MYCTA Tax_Id=419947 SubName: Full=Putative marr...   145   2e-33
sp|O33060|Y2140_MYCLE Tax_Id=1769 RecName: Full=Uncharacterized ...   144   3e-33
tr|B8ZSR5|B8ZSR5_MYCLB Tax_Id=561304 SubName: Full=Putative MarR...   144   3e-33
tr|A0QBI0|A0QBI0_MYCA1 Tax_Id=243243 SubName: Full=SpoU rRNA met...   132   1e-29
tr|D5UTW5|D5UTW5_TSUPA Tax_Id=521096 SubName: Full=Transcription...   128   3e-28
tr|B2HF93|B2HF93_MYCMM Tax_Id=216594 SubName: Full=Transcription...   123   8e-27
tr|D5PXU8|D5PXU8_COREQ Tax_Id=525370 SubName: Full=Regulatory pr...   122   2e-26
tr|Q47U28|Q47U28_THEFY Tax_Id=269800 SubName: Full=Regulatory pr...   115   1e-24
tr|D0L5L8|D0L5L8_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr...   115   2e-24
tr|C1ATM3|C1ATM3_RHOOB Tax_Id=632772 SubName: Full=Putative MarR...   114   3e-24
tr|C3JDY8|C3JDY8_RHOER Tax_Id=596309 SubName: Full=SpoU rRNA met...   113   7e-24
tr|Q0S6T2|Q0S6T2_RHOSR Tax_Id=101510 SubName: Full=Probable tran...   112   1e-23
tr|C0ZMS5|C0ZMS5_RHOE4 Tax_Id=234621 SubName: Full=Putative MarR...   112   1e-23
tr|Q5Z247|Q5Z247_NOCFA Tax_Id=37329 SubName: Full=Putative trans...   112   2e-23
tr|D3M1U5|D3M1U5_9ACTO Tax_Id=656024 SubName: Full=Transcription...   110   4e-23
tr|D2S8G0|D2S8G0_GEOOG Tax_Id=526225 SubName: Full=Transcription...   106   8e-22
tr|C6WI05|C6WI05_ACTMD Tax_Id=446462 SubName: Full=Transcription...   105   2e-21
tr|A4F7D2|A4F7D2_SACEN Tax_Id=405948 SubName: Full=Transcription...   103   5e-21
tr|D1BCJ1|D1BCJ1_SANKS Tax_Id=446469 SubName: Full=Transcription...   102   2e-20
tr|D3D7T4|D3D7T4_9ACTO Tax_Id=102897 SubName: Full=Transcription...   101   3e-20

>tr|A0R433|A0R433_MYCS2 Tax_Id=246196 SubName: Full=Regulatory
           protein, MarR;[Mycobacterium smegmatis]
          Length = 143

 Score =  243 bits (620), Expect = 5e-63
 Identities = 131/143 (91%), Positives = 131/143 (91%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           MKHLDARVASDLALAVIRFARQLRSQRSDSKV            KEGSMTPGALAVRERV
Sbjct: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVTLTQLSALSTLAKEGSMTPGALAVRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL
Sbjct: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120

Query: 121 DPDQRQTLIAAADLMSAMVDEKV 143
           DPDQRQTLIAAADLMSAMVDEKV
Sbjct: 121 DPDQRQTLIAAADLMSAMVDEKV 143


>tr|Q1B3G2|Q1B3G2_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, MarR family;[Mycobacterium sp.]
          Length = 143

 Score =  172 bits (436), Expect = 1e-41
 Identities = 89/140 (63%), Positives = 109/140 (77%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M  L++R+ASDL+LAV+R ARQLR +R++S +            KEG+MTPGALAVRERV
Sbjct: 1   MIDLESRLASDLSLAVVRLARQLRFRRAESPISLSQLSALSTLAKEGAMTPGALAVRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           RPPSMTRV+ SLAE GLV R AHP DGRQV+VS S  G +LVEAE+RASQEWL  +L  L
Sbjct: 61  RPPSMTRVIASLAEMGLVSRNAHPVDGRQVLVSVSPAGADLVEAEKRASQEWLQRRLASL 120

Query: 121 DPDQRQTLIAAADLMSAMVD 140
           +P+QR+TL+ AADLMSAMV+
Sbjct: 121 EPEQRKTLLMAADLMSAMVE 140


>tr|A3Q639|A3Q639_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, MarR family;[Mycobacterium sp.]
          Length = 143

 Score =  172 bits (436), Expect = 1e-41
 Identities = 89/140 (63%), Positives = 109/140 (77%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M  L++R+ASDL+LAV+R ARQLR +R++S +            KEG+MTPGALAVRERV
Sbjct: 1   MIDLESRLASDLSLAVVRLARQLRFRRAESPISLSQLSALSTLAKEGAMTPGALAVRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           RPPSMTRV+ SLAE GLV R AHP DGRQV+VS S  G +LVEAE+RASQEWL  +L  L
Sbjct: 61  RPPSMTRVIASLAEMGLVSRNAHPVDGRQVLVSVSPAGADLVEAEKRASQEWLQRRLASL 120

Query: 121 DPDQRQTLIAAADLMSAMVD 140
           +P+QR+TL+ AADLMSAMV+
Sbjct: 121 EPEQRKTLLMAADLMSAMVE 140


>tr|A1ULN8|A1ULN8_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, MarR family;[Mycobacterium sp.]
          Length = 143

 Score =  172 bits (436), Expect = 1e-41
 Identities = 89/140 (63%), Positives = 109/140 (77%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M  L++R+ASDL+LAV+R ARQLR +R++S +            KEG+MTPGALAVRERV
Sbjct: 1   MIDLESRLASDLSLAVVRLARQLRFRRAESPISLSQLSALSTLAKEGAMTPGALAVRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           RPPSMTRV+ SLAE GLV R AHP DGRQV+VS S  G +LVEAE+RASQEWL  +L  L
Sbjct: 61  RPPSMTRVIASLAEMGLVSRNAHPVDGRQVLVSVSPAGADLVEAEKRASQEWLQRRLASL 120

Query: 121 DPDQRQTLIAAADLMSAMVD 140
           +P+QR+TL+ AADLMSAMV+
Sbjct: 121 EPEQRKTLLMAADLMSAMVE 140


>tr|Q742L6|Q742L6_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 143

 Score =  159 bits (401), Expect = 1e-37
 Identities = 86/141 (60%), Positives = 99/141 (70%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M   DAR+ASDL+LAV+R ARQLR +   S V             EG MTPGALA+RERV
Sbjct: 1   MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALAMLANEGPMTPGALAIRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           RPPSMTRV+ SLAE GLV RT HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L
Sbjct: 61  RPPSMTRVIASLAEMGLVDRTPHPVDGRQVLVSVSEAGAELVKANRRARQEWLAKRLSTL 120

Query: 121 DPDQRQTLIAAADLMSAMVDE 141
           D D+R+TL  AADLM A+VDE
Sbjct: 121 DDDERETLRHAADLMLALVDE 141


>tr|D5PEW0|D5PEW0_9MYCO Tax_Id=525368 SubName: Full=Regulatory
           protein;[Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 143

 Score =  152 bits (385), Expect = 1e-35
 Identities = 83/141 (58%), Positives = 96/141 (68%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M   DAR+ASDL+LAV+R ARQLR +   S V             EG MTPGALA+RERV
Sbjct: 1   MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALATLGNEGPMTPGALAIRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           RPPSMTRV+ SLA+ GLV R  HP DGRQV+VS S  G ELV+  +RA QEWL  +L  L
Sbjct: 61  RPPSMTRVIASLADMGLVDRAPHPIDGRQVLVSVSPSGAELVKVTRRARQEWLAKRLATL 120

Query: 121 DPDQRQTLIAAADLMSAMVDE 141
           D +QR TL  AADLM A+VDE
Sbjct: 121 DSEQRDTLRNAADLMLALVDE 141


>tr|A0PKY6|A0PKY6_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein (Possibly marR-family);[Mycobacterium
           ulcerans]
          Length = 143

 Score =  152 bits (384), Expect = 1e-35
 Identities = 82/141 (58%), Positives = 97/141 (68%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M   D R+ASDL+LAV+R ARQLR +   S V             EG+MTPGALA+RERV
Sbjct: 1   MPDSDGRLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           RPPSMTRV+ SLA+ GLV RT HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L
Sbjct: 61  RPPSMTRVIASLADMGLVDRTPHPVDGRQVLVSVSEAGAELVKAARRARQEWLTERLATL 120

Query: 121 DPDQRQTLIAAADLMSAMVDE 141
           D D+R  L  AAD+M A+VDE
Sbjct: 121 DGDKRDILRNAADIMMALVDE 141


>tr|B1MJ17|B1MJ17_MYCA9 Tax_Id=561007 SubName: Full=Putative
           HTH-type transcriptional regulator MarR;[Mycobacterium
           abscessus]
          Length = 143

 Score =  149 bits (375), Expect = 1e-34
 Identities = 79/141 (56%), Positives = 97/141 (68%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M   DAR+ASDL+L VIR AR LR +R+DS V             EG+MTPGALA RERV
Sbjct: 1   MSDPDARLASDLSLVVIRLARHLRFRRADSPVSLTQLSALATLLNEGAMTPGALAARERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKL 120
           +PPSMTRV+ SLAE GLV R+AHP DGRQV+VS S  G ++V+A++ A +EWL   L   
Sbjct: 61  QPPSMTRVIASLAELGLVERSAHPTDGRQVVVSLSEAGADIVQADRSAREEWLREHLADF 120

Query: 121 DPDQRQTLIAAADLMSAMVDE 141
            PDQR  L  A DL+SA+V+E
Sbjct: 121 TPDQRAVLRQATDLLSALVNE 141


>sp|P67746|Y904_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator Mb0904;[Mycobacterium
           bovis]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>sp|P67745|Y880_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator
           Rv0880/MT0903.1;[Mycobacterium tuberculosis]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|C6DWL5|C6DWL5_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator, marR-family;[Mycobacterium tuberculosis]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|C1ALL4|C1ALL4_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|A5WKQ1|A5WKQ1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein,
           marR-family;[Mycobacterium tuberculosis]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|A1KH12|A1KH12_MYCBP Tax_Id=410289 SubName: Full=Possible
           transcriptional regulatory protein (Possibly
           marR-family);[Mycobacterium bovis]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D6G1S8|D6G1S8_MYCTU Tax_Id=478435 SubName: Full=Transcriptional
           regulator, marR-family;[Mycobacterium tuberculosis KZN
           605]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D6FNY2|D6FNY2_MYCTU Tax_Id=611304 SubName: Full=Transcriptional
           regulator, marR-family;[Mycobacterium tuberculosis K85]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D6FF46|D6FF46_MYCTU Tax_Id=611303 SubName: Full=Transcriptional
           regulator, marR-family;[Mycobacterium tuberculosis
           CPHL_A]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D6F2F8|D6F2F8_MYCTU Tax_Id=611302 SubName: Full=Transcriptional
           regulator, marR-family;[Mycobacterium tuberculosis T46]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D5Z1B8|D5Z1B8_MYCTU Tax_Id=537209 SubName: Full=SpoU rRNA
           methylase family protein;[Mycobacterium tuberculosis GM
           1503]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D5YPI1|D5YPI1_MYCTU Tax_Id=515616 SubName: Full=MarR family
           transcriptional regulator;[Mycobacterium tuberculosis
           02_1987]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D5YD56|D5YD56_MYCTU Tax_Id=520140 SubName: Full=SpoU rRNA
           methylase;[Mycobacterium tuberculosis EAS054]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D5Y1K7|D5Y1K7_MYCTU Tax_Id=520141 SubName: Full=MarR family
           transcriptional regulator;[Mycobacterium tuberculosis
           T85]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|D5XRH8|D5XRH8_MYCTU Tax_Id=515617 SubName: Full=Transcriptional
           regulator, marR-family;[Mycobacterium tuberculosis T92]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|A4KFI5|A4KFI5_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein (Possibly
           marR-family);[Mycobacterium tuberculosis str. Haarlem]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|A2VGH6|A2VGH6_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 143

 Score =  146 bits (369), Expect = 7e-34
 Identities = 78/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>tr|A5U0R8|A5U0R8_MYCTA Tax_Id=419947 SubName: Full=Putative
           marr-family transcriptional regulatory
           protein;[Mycobacterium tuberculosis]
          Length = 143

 Score =  145 bits (366), Expect = 2e-33
 Identities = 77/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R +RQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MT+V+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL  +L  L+  +
Sbjct: 65  MTKVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSE 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L +AADLM A+VDE
Sbjct: 125 RDILRSAADLMLALVDE 141


>sp|O33060|Y2140_MYCLE Tax_Id=1769 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator ML2140;[Mycobacterium
           leprae]
          Length = 143

 Score =  144 bits (364), Expect = 3e-33
 Identities = 77/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R ARQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLARQLRFRNPQSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL+ +L  L+ D+
Sbjct: 65  MTRVIASLADMGFVDREPHPVDGRQVLVSVSQSGAELVKAARRARQEWLVERLMTLNSDK 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L  AADL+  ++DE
Sbjct: 125 RDILRNAADLILELIDE 141


>tr|B8ZSR5|B8ZSR5_MYCLB Tax_Id=561304 SubName: Full=Putative
           MarR-family protein;[Mycobacterium leprae]
          Length = 143

 Score =  144 bits (364), Expect = 3e-33
 Identities = 77/137 (56%), Positives = 95/137 (69%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DAR+ASDL+LAV+R ARQLR +   S V             EG+MTPGALA+RERVRPPS
Sbjct: 5   DARLASDLSLAVMRLARQLRFRNPQSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPS 64

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ G V R  HP DGRQV+VS S  G ELV+A +RA QEWL+ +L  L+ D+
Sbjct: 65  MTRVIASLADMGFVDREPHPVDGRQVLVSVSQSGAELVKAARRARQEWLVERLMTLNSDK 124

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L  AADL+  ++DE
Sbjct: 125 RDILRNAADLILELIDE 141


>tr|A0QBI0|A0QBI0_MYCA1 Tax_Id=243243 SubName: Full=SpoU rRNA
           methylase family protein;[Mycobacterium avium]
          Length = 432

 Score =  132 bits (333), Expect = 1e-29
 Identities = 72/117 (61%), Positives = 81/117 (69%)

Query: 1   MKHLDARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERV 60
           M   DAR+ASDL+LAV+R ARQLR +   S V             EG MTPGALAVRERV
Sbjct: 1   MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALAMLANEGPMTPGALAVRERV 60

Query: 61  RPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQL 117
           RPPSMTRV+ SLAE GLV RT HP DGRQV+VS S  G ELV+A +RA QEWL  +L
Sbjct: 61  RPPSMTRVIASLAEMGLVDRTPHPVDGRQVLVSVSEAGAELVKANRRARQEWLAKRL 117


>tr|D5UTW5|D5UTW5_TSUPA Tax_Id=521096 SubName: Full=Transcriptional
           regulator, MarR family;[Tsukamurella paurometabola DSM
           20162]
          Length = 151

 Score =  128 bits (321), Expect = 3e-28
 Identities = 65/135 (48%), Positives = 88/135 (65%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           D R+A DL+LA +RFAR LR +R DS V             +G +TPG LA RERV+PPS
Sbjct: 10  DDRLAGDLSLATVRFARHLRGRRRDSLVSLTQLSALNALANDGPLTPGQLAARERVQPPS 69

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SLA+ GLV R  HP DGRQV+VS S EG +++  E RA + WL  +L +L P +
Sbjct: 70  MTRVIASLADLGLVRRAPHPTDGRQVIVSLSEEGEQVITGEARAREAWLRGKLDELTPAE 129

Query: 125 RQTLIAAADLMSAMV 139
           R+TL  A  +++ ++
Sbjct: 130 RETLDGAVSILNRLI 144


>tr|B2HF93|B2HF93_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Possibly marR-family);[Mycobacterium
           marinum]
          Length = 95

 Score =  123 bits (308), Expect = 8e-27
 Identities = 62/93 (66%), Positives = 73/93 (78%)

Query: 49  MTPGALAVRERVRPPSMTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRA 108
           MTPGALA+RERVRPPSMTRV+ SLA+ GLV RT HP DGRQV+VS S  G ELV+A +RA
Sbjct: 1   MTPGALAIRERVRPPSMTRVIASLADMGLVDRTPHPVDGRQVLVSVSEAGAELVKAARRA 60

Query: 109 SQEWLLTQLGKLDPDQRQTLIAAADLMSAMVDE 141
            QEWL  +L  LD D+R+ L  AAD+M A+VDE
Sbjct: 61  RQEWLAERLATLDGDKREILRNAADIMMALVDE 93


>tr|D5PXU8|D5PXU8_COREQ Tax_Id=525370 SubName: Full=Regulatory
           protein;[Rhodococcus equi ATCC 33707]
          Length = 147

 Score =  122 bits (305), Expect = 2e-26
 Identities = 64/134 (47%), Positives = 87/134 (64%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +ASDL+LAV+R  R LR +R+D++V             +G MTPGALA RE+V+PPSMTR
Sbjct: 12  LASDLSLAVVRLTRHLRGRRADAQVTLTQLSALVTLSADGPMTPGALAQREKVQPPSMTR 71

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
           V+ SLA+ GLV R  HP DGRQ++VS S  G  L+E E +A + W+  +L  LD  Q  T
Sbjct: 72  VIASLADVGLVDRAPHPTDGRQIIVSLSDAGHALIEGETQAREAWMTEKLSGLDATQLAT 131

Query: 128 LIAAADLMSAMVDE 141
           L  A  ++S++V E
Sbjct: 132 LRDAVTIISSLVSE 145


>tr|Q47U28|Q47U28_THEFY Tax_Id=269800 SubName: Full=Regulatory
           protein, MarR;[Thermobifida fusca]
          Length = 151

 Score =  115 bits (289), Expect = 1e-24
 Identities = 58/134 (43%), Positives = 87/134 (64%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           DA +A+ L +AV R AR+LR+QR DS +            + G+MTPGALA  E+V+PPS
Sbjct: 15  DASLAAALRMAVGRLARRLRAQRPDSSLSLGQGSALFTLARHGTMTPGALADHEKVQPPS 74

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTR++ +L E+GLV R  HP DGRQ +V  + EG++LV+A+ +  + WL  QL +L  + 
Sbjct: 75  MTRIIAALEERGLVRRRRHPDDGRQQLVEITEEGIQLVQADHQRREAWLTRQLAELSHED 134

Query: 125 RQTLIAAADLMSAM 138
           ++ L  AA++M  +
Sbjct: 135 KEVLRRAAEIMDRL 148


>tr|D0L5L8|D0L5L8_GORB4 Tax_Id=526226 SubName: Full=Regulatory
           protein MarR;[Gordonia bronchialis]
          Length = 146

 Score =  115 bits (288), Expect = 2e-24
 Identities = 60/136 (44%), Positives = 84/136 (61%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           D  +A DL+LAV+RFAR+LR +R +  V             EG MTPGALA  ERVRPPS
Sbjct: 7   DGSLAGDLSLAVVRFARRLRGRRENKLVSLTQLSALSTLHHEGPMTPGALAAAERVRPPS 66

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ SL++ G++ R  HP DGRQ +V+ +  G ++V  E  A + WL  +L +L  D+
Sbjct: 67  MTRVIASLSDLGMIKREPHPTDGRQAIVTLAPAGRDVVTDELAARKAWLDDRLSELTSDE 126

Query: 125 RQTLIAAADLMSAMVD 140
           R TL     +M+ M++
Sbjct: 127 RDTLRQVVAIMNKMIN 142


>tr|C1ATM3|C1ATM3_RHOOB Tax_Id=632772 SubName: Full=Putative MarR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 143

 Score =  114 bits (286), Expect = 3e-24
 Identities = 60/134 (44%), Positives = 85/134 (63%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +ASDL+LAV+R  R LR +R D++V            ++G+MTPG LA RE+V+PPSMTR
Sbjct: 8   LASDLSLAVVRLTRHLRGRRVDAQVSLTQLSALATLARDGAMTPGNLAAREKVQPPSMTR 67

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
           V+ SL E GLV R  HP DGRQ++V+ S  G  L+  E  A + W+  +L  LD  Q +T
Sbjct: 68  VIASLVELGLVERAPHPTDGRQIIVTLSDAGHALIADETHAREAWMNERLSGLDESQLKT 127

Query: 128 LIAAADLMSAMVDE 141
           L  A  +++++V E
Sbjct: 128 LRDAVGIITSIVAE 141


>tr|C3JDY8|C3JDY8_RHOER Tax_Id=596309 SubName: Full=SpoU rRNA
           methylase family protein;[Rhodococcus erythropolis
           SK121]
          Length = 143

 Score =  113 bits (283), Expect = 7e-24
 Identities = 60/134 (44%), Positives = 85/134 (63%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +ASDL+LAV+R  R LR +R D++V            + G MTPG LA RE+V+PPSMTR
Sbjct: 8   LASDLSLAVVRLTRHLRGRRVDAQVSLTQLSALASLDQYGPMTPGVLAAREKVQPPSMTR 67

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
           V+ SLAE GLV R+ HP DGRQ++V+ S  G  L+  E  A + W+  QL  L  ++  T
Sbjct: 68  VVASLAELGLVERSPHPTDGRQIIVNLSDAGQALLADETHAREAWMNEQLAGLGGEELAT 127

Query: 128 LIAAADLMSAMVDE 141
           L  A ++++ MV++
Sbjct: 128 LRGAVEIITEMVNK 141


>tr|Q0S6T2|Q0S6T2_RHOSR Tax_Id=101510 SubName: Full=Probable
           transcriptional regulator, MarR family
           protein;[Rhodococcus sp.]
          Length = 143

 Score =  112 bits (281), Expect = 1e-23
 Identities = 59/132 (44%), Positives = 84/132 (63%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +ASDL+LAV+R  R LR +R D++V            ++G+MTPG LA RE+V+PPSMTR
Sbjct: 8   LASDLSLAVVRLTRHLRGRRVDAQVSLTQLSALATLARDGAMTPGNLAAREKVQPPSMTR 67

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
           V+ SL E GLV R  HP DGRQ++V+ S  G  L+  E  A + W+  +L  LD  Q +T
Sbjct: 68  VIASLVELGLVERAPHPTDGRQIIVTLSDAGHALIADETHAREAWMNERLSGLDEAQLKT 127

Query: 128 LIAAADLMSAMV 139
           L  A  +++++V
Sbjct: 128 LRDAVGIITSIV 139


>tr|C0ZMS5|C0ZMS5_RHOE4 Tax_Id=234621 SubName: Full=Putative MarR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 143

 Score =  112 bits (280), Expect = 1e-23
 Identities = 60/134 (44%), Positives = 84/134 (62%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +ASDL+LAV+R  R LR +R D++V            + G MTPG LA RE+V+PPSMTR
Sbjct: 8   LASDLSLAVVRLTRHLRGRRVDAQVSLTQLSALASLDQYGPMTPGVLAAREKVQPPSMTR 67

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
           V+ SLAE GLV R+ HP DGRQ++V+ S  G  L+  E  A + W+  QL  L  ++  T
Sbjct: 68  VVASLAELGLVERSPHPTDGRQIIVNLSDAGQALLADETHAREAWMNEQLAGLGGEELAT 127

Query: 128 LIAAADLMSAMVDE 141
           L  A  +++ MV++
Sbjct: 128 LRGAVGIITEMVNK 141


>tr|Q5Z247|Q5Z247_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 145

 Score =  112 bits (279), Expect = 2e-23
 Identities = 60/134 (44%), Positives = 81/134 (60%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +A +L+LAV+R  R LR +R+DS V            +EG+MTPGALA +ERV+PPSMTR
Sbjct: 10  LAGELSLAVVRLTRHLRGRRTDSPVSLTQLSALATLAREGAMTPGALAAKERVQPPSMTR 69

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
           V+ SL++  LV R  HP DGRQ++VS S  G  L+  E  A + W+  QL  L  +Q   
Sbjct: 70  VIASLSDLKLVERKPHPTDGRQIIVSLSESGRALIADEASAREAWMTEQLSGLTGEQLDV 129

Query: 128 LIAAADLMSAMVDE 141
           L  A  +M  +V E
Sbjct: 130 LEQAVAIMKQIVAE 143


>tr|D3M1U5|D3M1U5_9ACTO Tax_Id=656024 SubName: Full=Transcriptional
           regulator, MarR family;[Frankia symbiont of Datisca
           glomerata]
          Length = 151

 Score =  110 bits (276), Expect = 4e-23
 Identities = 58/134 (43%), Positives = 86/134 (64%), Gaps = 1/134 (0%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           +A++AS L L+V+R +R++R +RS++ +            + GSMT G LA  ERV+PPS
Sbjct: 16  EAQLASVLRLSVMRLSRRMRQERSNT-LTPTQIATLATLKRHGSMTLGELAAHERVQPPS 74

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+  LAE GLV R AHP+DGRQV+   +  G++L+EA++R   EWL  +L  L PD+
Sbjct: 75  MTRVVAHLAEAGLVARGAHPSDGRQVIARITEAGIDLLEADRRRRDEWLAERLASLSPDE 134

Query: 125 RQTLIAAADLMSAM 138
              L  AA ++  +
Sbjct: 135 MAALERAAPILDTL 148


>tr|D2S8G0|D2S8G0_GEOOG Tax_Id=526225 SubName: Full=Transcriptional
           regulator, MarR family;[Geodermatophilus obscurus]
          Length = 144

 Score =  106 bits (265), Expect = 8e-22
 Identities = 57/133 (42%), Positives = 81/133 (60%)

Query: 6   ARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSM 65
           A +A DL LAV+RF+R+LR+QR D+ V            + G M+PG LA  ERV+PPSM
Sbjct: 9   AALAHDLRLAVMRFSRRLRNQRVDTSVTLTHLAALSTLKRHGRMSPGELAGHERVQPPSM 68

Query: 66  TRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQR 125
           TRV+ +L   GLV R+ HP DGRQV++  +    +L+ AE RA + WL   L +L  ++R
Sbjct: 69  TRVVVALEGMGLVTRSPHPTDGRQVVIDLTPAAEDLLGAEARAREAWLSGMLQRLTAEER 128

Query: 126 QTLIAAADLMSAM 138
             L  AA ++  +
Sbjct: 129 AVLREAAVIIDKL 141


>tr|C6WI05|C6WI05_ACTMD Tax_Id=446462 SubName: Full=Transcriptional
           regulator, MarR family;[Actinosynnema mirum]
          Length = 148

 Score =  105 bits (262), Expect = 2e-21
 Identities = 56/137 (40%), Positives = 78/137 (56%)

Query: 5   DARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPS 64
           D  +AS L LA+IR  R+LR+QR +S +            K G +TPG LA +E V+PPS
Sbjct: 12  DHGLASRLRLAIIRLNRRLRAQRVNSTISLTQVSALSTLHKCGPLTPGELAAKEGVQPPS 71

Query: 65  MTRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQ 124
           MTRV+ +L E G   R  HP DGRQ +V  S  G++ + AE  A + WL   L +L P+ 
Sbjct: 72  MTRVIAALEELGFATRRPHPTDGRQAIVELSPSGMQYINAEVSAREAWLDQHLAELTPED 131

Query: 125 RQTLIAAADLMSAMVDE 141
           R  L  AA+++  M  +
Sbjct: 132 RAVLSRAAEIIDRMAGQ 148


>tr|A4F7D2|A4F7D2_SACEN Tax_Id=405948 SubName: Full=Transcriptional
           regulator, MarR family;[Saccharopolyspora erythraea]
          Length = 144

 Score =  103 bits (258), Expect = 5e-21
 Identities = 55/131 (41%), Positives = 78/131 (59%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +AS L +AV+R  R+LR+Q + S +            K G MTPG LA +E V+PPSMTR
Sbjct: 11  LASRLRVAVVRLNRRLRAQSTGSAITLSQLSALFCLNKVGPMTPGELAAKEGVQPPSMTR 70

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
           V+ +L + GLVVR AHP DGRQ +V  +  G   ++ E  A + WL  QL  L  ++R T
Sbjct: 71  VIAALEDSGLVVRRAHPTDGRQAIVELTDAGKARIDEEVSARERWLDLQLADLTEEERTT 130

Query: 128 LIAAADLMSAM 138
           L  AA+++  +
Sbjct: 131 LCRAAEIIDRL 141


>tr|D1BCJ1|D1BCJ1_SANKS Tax_Id=446469 SubName: Full=Transcriptional
           regulator;[Sanguibacter keddieii]
          Length = 145

 Score =  102 bits (254), Expect = 2e-20
 Identities = 52/128 (40%), Positives = 76/128 (59%)

Query: 8   VASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSMTR 67
           +   L +A+ R +R+LR+QR ++ +            K G MTPGALA  E +RPPSMTR
Sbjct: 12  LGGQLRVALTRISRRLRNQRGEADLPEGQFAVLTTIYKHGPMTPGALADHEHIRPPSMTR 71

Query: 68  VLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQRQT 127
            + +LAE GLV +  H  D R V+V  +  G + V   +R  + WL   LG+L P++RQT
Sbjct: 72  TVNALAELGLVTKVGHETDKRLVLVELTTTGRDEVRETRRRREAWLTKNLGQLTPEERQT 131

Query: 128 LIAAADLM 135
           L AA++L+
Sbjct: 132 LAAASELL 139


>tr|D3D7T4|D3D7T4_9ACTO Tax_Id=102897 SubName: Full=Transcriptional
           regulator, MarR family;[Frankia sp. EUN1f]
          Length = 141

 Score =  101 bits (252), Expect = 3e-20
 Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 1/133 (0%)

Query: 6   ARVASDLALAVIRFARQLRSQRSDSKVXXXXXXXXXXXXKEGSMTPGALAVRERVRPPSM 65
           A +AS L ++V+R +R++R +RS S +            + G MT G +A  ERV+PPSM
Sbjct: 7   AELASTLRMSVMRLSRRMRQERS-STLTPTQVATLATLARHGPMTLGEIAAYERVQPPSM 65

Query: 66  TRVLTSLAEQGLVVRTAHPADGRQVMVSASAEGVELVEAEQRASQEWLLTQLGKLDPDQR 125
           TRV+T LAE GLV R  HP+DGRQV+   +  G EL+ A++R   EWL   L  L PD+ 
Sbjct: 66  TRVITLLAEAGLVNRGQHPSDGRQVIAEVTEAGRELLAADRRRRDEWLAEHLEDLAPDEV 125

Query: 126 QTLIAAADLMSAM 138
             L AAA ++  +
Sbjct: 126 DALKAAAPILDRL 138


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.316    0.126    0.335 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 840,566,457
Number of extensions: 23614294
Number of successful extensions: 109151
Number of sequences better than 10.0: 2426
Number of HSP's gapped: 110496
Number of HSP's successfully gapped: 2426
Length of query: 143
Length of database: 4,236,830,644
Length adjustment: 107
Effective length of query: 36
Effective length of database: 2,898,489,196
Effective search space: 104345611056
Effective search space used: 104345611056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)