BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_5696 (149 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R441|A0R441_MYCS2 Tax_Id=246196 SubName: Full='Cold-shock' ... 262 9e-69 tr|Q1B3F5|Q1B3F5_MYCSS Tax_Id=164756 SubName: Full=Cold-shock DN... 227 4e-58 tr|A3Q646|A3Q646_MYCSJ Tax_Id=164757 SubName: Full=Cold-shock DN... 220 5e-56 tr|A1ULP5|A1ULP5_MYCSK Tax_Id=189918 SubName: Full=Cold-shock DN... 220 5e-56 tr|A1TF67|A1TF67_MYCVP Tax_Id=350058 SubName: Full=Cold-shock DN... 220 5e-56 tr|A0PKZ5|A0PKZ5_MYCUA Tax_Id=362242 (cspB)SubName: Full=Cold sh... 215 1e-54 tr|A4T7B7|A4T7B7_MYCGI Tax_Id=350054 SubName: Full=Cold-shock DN... 214 3e-54 tr|Q742M5|Q742M5_MYCPA Tax_Id=1770 (cspB)SubName: Full=CspB;[Myc... 213 5e-54 tr|A0QBH1|A0QBH1_MYCA1 Tax_Id=243243 SubName: Full='Cold-shock' ... 210 4e-53 tr|B2HFA2|B2HFA2_MYCMM Tax_Id=216594 (cspB)SubName: Full=Cold sh... 209 9e-53 tr|D5PEV2|D5PEV2_9MYCO Tax_Id=525368 (cspB)SubName: Full=Cold-sh... 209 9e-53 tr|C6DWM4|C6DWM4_MYCTK Tax_Id=478434 SubName: Full=Cold shock pr... 206 6e-52 tr|A5WKP2|A5WKP2_MYCTF Tax_Id=336982 SubName: Full=Cold shock pr... 206 6e-52 tr|D6G1T7|D6G1T7_MYCTU Tax_Id=478435 SubName: Full=Cold shock pr... 206 6e-52 tr|D5YPG8|D5YPG8_MYCTU Tax_Id=515616 SubName: Full=Cold shock pr... 206 6e-52 tr|A2VGG7|A2VGG7_MYCTU Tax_Id=348776 SubName: Full=Cold shock-li... 206 6e-52 tr|O33052|O33052_MYCLE Tax_Id=1769 (cspA)SubName: Full=Probable ... 206 7e-52 tr|B8ZSS0|B8ZSS0_MYCLB Tax_Id=561304 (cspB)SubName: Full=Probabl... 206 7e-52 tr|Q7U126|Q7U126_MYCBO Tax_Id=1765 (cspB)SubName: Full=PROBABLE ... 203 5e-51 tr|O53883|O53883_MYCTU Tax_Id=1773 (cspB)SubName: Full=Cold-shoc... 203 5e-51 tr|C1ALK5|C1ALK5_MYCBT Tax_Id=561275 (cspB)SubName: Full=Putativ... 203 5e-51 tr|A5U0Q9|A5U0Q9_MYCTA Tax_Id=419947 (cspB)SubName: Full=Cold-sh... 203 5e-51 tr|A1KH03|A1KH03_MYCBP Tax_Id=410289 (cspB)SubName: Full=Probabl... 203 5e-51 tr|D6FNW9|D6FNW9_MYCTU Tax_Id=611304 SubName: Full=Cold shock pr... 203 5e-51 tr|D6F2E8|D6F2E8_MYCTU Tax_Id=611302 SubName: Full=Cold shock pr... 203 5e-51 tr|D5ZDT6|D5ZDT6_MYCTU Tax_Id=537210 SubName: Full=Cold shock pr... 203 5e-51 tr|D5Z1A9|D5Z1A9_MYCTU Tax_Id=537209 SubName: Full=Cold shock-li... 203 5e-51 tr|D5YD47|D5YD47_MYCTU Tax_Id=520140 SubName: Full=Cold-shock pr... 203 5e-51 tr|D5Y1J8|D5Y1J8_MYCTU Tax_Id=520141 SubName: Full=Cold shock pr... 203 5e-51 tr|D5XRG7|D5XRG7_MYCTU Tax_Id=515617 SubName: Full=Cold shock pr... 203 5e-51 tr|B1MJ10|B1MJ10_MYCA9 Tax_Id=561007 SubName: Full=Probable cold... 201 3e-50 tr|A4KFH7|A4KFH7_MYCTU Tax_Id=395095 SubName: Full=Cold shock-li... 200 5e-50 tr|D6FF37|D6FF37_MYCTU Tax_Id=611303 SubName: Full=Cold shock pr... 199 9e-50 tr|C1ATL4|C1ATL4_RHOOB Tax_Id=632772 SubName: Full=Cold shock pr... 191 2e-47 tr|D0L5K3|D0L5K3_GORB4 Tax_Id=526226 SubName: Full=Cold-shock pr... 191 2e-47 tr|Q0S6U1|Q0S6U1_RHOSR Tax_Id=101510 SubName: Full=Probable cold... 190 6e-47 tr|C3JDZ8|C3JDZ8_RHOER Tax_Id=596309 SubName: Full=Cold-shock DN... 186 6e-46 tr|C0ZMT5|C0ZMT5_RHOE4 Tax_Id=234621 SubName: Full=Probable cold... 185 2e-45 tr|Q5Z257|Q5Z257_NOCFA Tax_Id=37329 SubName: Full=Putative cold ... 183 5e-45 tr|D5PXV8|D5PXV8_COREQ Tax_Id=525370 (cspB)SubName: Full=Cold-sh... 176 8e-43 tr|D5UTV7|D5UTV7_TSUPA Tax_Id=521096 SubName: Full=Cold-shock DN... 166 9e-40 tr|C6WHZ7|C6WHZ7_ACTMD Tax_Id=446462 SubName: Full=Cold-shock DN... 160 6e-38 tr|A4F7B5|A4F7B5_SACEN Tax_Id=405948 SubName: Full=Cold-shock DN... 159 8e-38 tr|C7N0G6|C7N0G6_SACVD Tax_Id=471857 SubName: Full=Cold-shock DN... 157 4e-37 tr|D1VAH9|D1VAH9_9ACTO Tax_Id=298654 SubName: Full=Cold-shock DN... 152 1e-35 >tr|A0R441|A0R441_MYCS2 Tax_Id=246196 SubName: Full='Cold-shock' DNA-binding domain protein;[Mycobacterium smegmatis] Length = 149 Score = 262 bits (670), Expect = 9e-69 Identities = 133/149 (89%), Positives = 133/149 (89%) Query: 1 MFLLADNDERVRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVE 60 MFLLADNDERVRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVE Sbjct: 1 MFLLADNDERVRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVE 60 Query: 61 FGVAAGRRGPQALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQP 120 FGVAAGRRGPQALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQP Sbjct: 61 FGVAAGRRGPQALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQP 120 Query: 121 ELRKGRYPDXXXXXXXXXXXXXXXXELDA 149 ELRKGRYPD ELDA Sbjct: 121 ELRKGRYPDRKVARRVSEVVRAVARELDA 149 >tr|Q1B3F5|Q1B3F5_MYCSS Tax_Id=164756 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 147 Score = 227 bits (578), Expect = 4e-58 Identities = 111/143 (77%), Positives = 121/143 (84%) Query: 7 NDERVRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAG 66 +DE+V VPTG+VKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFGVAAG Sbjct: 5 DDEQVTKVPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAG 64 Query: 67 RRGPQALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGR 126 RRGPQALSL LIDPPPSLS+ RREAERPEHKHTPDELHGM+ D+ITLLESA+QP+L+KGR Sbjct: 65 RRGPQALSLTLIDPPPSLSKTRREAERPEHKHTPDELHGMIGDLITLLESAIQPDLQKGR 124 Query: 127 YPDXXXXXXXXXXXXXXXXELDA 149 YPD ELDA Sbjct: 125 YPDRKVARRVSEVVKAVARELDA 147 >tr|A3Q646|A3Q646_MYCSJ Tax_Id=164757 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 136 Score = 220 bits (560), Expect = 5e-56 Identities = 107/136 (78%), Positives = 116/136 (85%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTG+VKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFGVAAGRRGPQAL Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDXXXX 133 SL LIDPPPSLS+ RREAERPEHKHTPDELHGM+ D+ITLLESA+QP+L+KGRYPD Sbjct: 61 SLTLIDPPPSLSKTRREAERPEHKHTPDELHGMIGDLITLLESAIQPDLQKGRYPDRKVA 120 Query: 134 XXXXXXXXXXXXELDA 149 ELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|A1ULP5|A1ULP5_MYCSK Tax_Id=189918 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 136 Score = 220 bits (560), Expect = 5e-56 Identities = 107/136 (78%), Positives = 116/136 (85%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTG+VKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFGVAAGRRGPQAL Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDXXXX 133 SL LIDPPPSLS+ RREAERPEHKHTPDELHGM+ D+ITLLESA+QP+L+KGRYPD Sbjct: 61 SLTLIDPPPSLSKTRREAERPEHKHTPDELHGMIGDLITLLESAIQPDLQKGRYPDRKVA 120 Query: 134 XXXXXXXXXXXXELDA 149 ELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|A1TF67|A1TF67_MYCVP Tax_Id=350058 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium vanbaalenii] Length = 136 Score = 220 bits (560), Expect = 5e-56 Identities = 110/136 (80%), Positives = 115/136 (84%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTG+VKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFGVAAGRRGPQAL Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDXXXX 133 SLKLIDPPPSL+R RREA EHKH+PDELHGMVEDMITLLESAVQPELRKGRYPD Sbjct: 61 SLKLIDPPPSLTRTRREAAAVEHKHSPDELHGMVEDMITLLESAVQPELRKGRYPDRKVA 120 Query: 134 XXXXXXXXXXXXELDA 149 ELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|A0PKZ5|A0PKZ5_MYCUA Tax_Id=362242 (cspB)SubName: Full=Cold shock-like protein B CspB;[Mycobacterium ulcerans] Length = 184 Score = 215 bits (548), Expect = 1e-54 Identities = 107/143 (74%), Positives = 119/143 (83%), Gaps = 2/143 (1%) Query: 7 NDERVRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAG 66 +D++VR VPTGKVKWYD++KGFGFLSQE+GEDVYVRSSALPAGVE LK+GQRVEFG+A+G Sbjct: 44 SDKQVRAVPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASG 103 Query: 67 RRGPQALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGR 126 RRGPQALSLKL+DPPPSL+R R EA EHKH+PDELHGMVEDMITLLES VQPELRKGR Sbjct: 104 RRGPQALSLKLLDPPPSLTRTRHEA--VEHKHSPDELHGMVEDMITLLESTVQPELRKGR 161 Query: 127 YPDXXXXXXXXXXXXXXXXELDA 149 YPD ELDA Sbjct: 162 YPDRKTARRVSEVVKAVARELDA 184 >tr|A4T7B7|A4T7B7_MYCGI Tax_Id=350054 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium gilvum] Length = 136 Score = 214 bits (545), Expect = 3e-54 Identities = 106/136 (77%), Positives = 113/136 (83%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTG+VKWYDAEKGFGFLSQE+GEDVYVRSSALPAGVE LK+GQRVEFGVAAGRRGPQAL Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDXXXX 133 +KLIDPPPS+SR RREA EHKHTPDELHGMVEDMITLLE AVQPELRKG+YPD Sbjct: 61 QVKLIDPPPSVSRNRREAAAAEHKHTPDELHGMVEDMITLLEGAVQPELRKGKYPDRKVA 120 Query: 134 XXXXXXXXXXXXELDA 149 ELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|Q742M5|Q742M5_MYCPA Tax_Id=1770 (cspB)SubName: Full=CspB;[Mycobacterium paratuberculosis] Length = 138 Score = 213 bits (543), Expect = 5e-54 Identities = 107/139 (76%), Positives = 116/139 (83%), Gaps = 1/139 (0%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 +R VPTGKVKWYDA+KGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFG+A+GRRGP Sbjct: 1 MRPVPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDX 130 QALSLKLI+PPPSL++ARRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 QALSLKLIEPPPSLTKARREGP-AEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDR 119 Query: 131 XXXXXXXXXXXXXXXELDA 149 ELDA Sbjct: 120 KTARRVSEVVRAVARELDA 138 >tr|A0QBH1|A0QBH1_MYCA1 Tax_Id=243243 SubName: Full='Cold-shock' DNA-binding domain;[Mycobacterium avium] Length = 135 Score = 210 bits (535), Expect = 4e-53 Identities = 105/136 (77%), Positives = 114/136 (83%), Gaps = 1/136 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYDA+KGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDXXXX 133 SLKLI+PPPSL++ARRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLKLIEPPPSLTKARREGP-AEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 119 Query: 134 XXXXXXXXXXXXELDA 149 ELDA Sbjct: 120 RRVSEVVRAVARELDA 135 >tr|B2HFA2|B2HFA2_MYCMM Tax_Id=216594 (cspB)SubName: Full=Cold shock-like protein B CspB;[Mycobacterium marinum] Length = 134 Score = 209 bits (532), Expect = 9e-53 Identities = 104/136 (76%), Positives = 114/136 (83%), Gaps = 2/136 (1%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD++KGFGFLSQE+GEDVYVRSSALPAGVE LK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDXXXX 133 SLKL+DPPPSL+R RREA EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLKLLDPPPSLTRTRREA--VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 Query: 134 XXXXXXXXXXXXELDA 149 ELDA Sbjct: 119 RRVSEVVKAVARELDA 134 >tr|D5PEV2|D5PEV2_9MYCO Tax_Id=525368 (cspB)SubName: Full=Cold-shock domain family protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 137 Score = 209 bits (532), Expect = 9e-53 Identities = 101/117 (86%), Positives = 111/117 (94%), Gaps = 1/117 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYDA+KGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERP-EHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SLKLI+PPPSL++A+ E P EHKH+PDELHGMVEDMITLLESAVQPELRKGRYPD Sbjct: 61 SLKLIEPPPSLTKAQGRREAPVEHKHSPDELHGMVEDMITLLESAVQPELRKGRYPD 117 >tr|C6DWM4|C6DWM4_MYCTK Tax_Id=478434 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis] Length = 138 Score = 206 bits (525), Expect = 6e-52 Identities = 101/119 (84%), Positives = 109/119 (91%), Gaps = 1/119 (0%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 +R VPTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGP Sbjct: 1 MRPVPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALSL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 QALSLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 118 >tr|A5WKP2|A5WKP2_MYCTF Tax_Id=336982 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis] Length = 138 Score = 206 bits (525), Expect = 6e-52 Identities = 101/119 (84%), Positives = 109/119 (91%), Gaps = 1/119 (0%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 +R VPTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGP Sbjct: 1 MRPVPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALSL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 QALSLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 118 >tr|D6G1T7|D6G1T7_MYCTU Tax_Id=478435 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis KZN 605] Length = 138 Score = 206 bits (525), Expect = 6e-52 Identities = 101/119 (84%), Positives = 109/119 (91%), Gaps = 1/119 (0%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 +R VPTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGP Sbjct: 1 MRPVPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALSL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 QALSLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 118 >tr|D5YPG8|D5YPG8_MYCTU Tax_Id=515616 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis 02_1987] Length = 138 Score = 206 bits (525), Expect = 6e-52 Identities = 101/119 (84%), Positives = 109/119 (91%), Gaps = 1/119 (0%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 +R VPTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGP Sbjct: 1 MRPVPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALSL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 QALSLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 118 >tr|A2VGG7|A2VGG7_MYCTU Tax_Id=348776 SubName: Full=Cold shock-like protein B cspB;[Mycobacterium tuberculosis C] Length = 138 Score = 206 bits (525), Expect = 6e-52 Identities = 101/119 (84%), Positives = 109/119 (91%), Gaps = 1/119 (0%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 +R VPTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGP Sbjct: 1 MRPVPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALSL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 QALSLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 118 >tr|O33052|O33052_MYCLE Tax_Id=1769 (cspA)SubName: Full=Probable cold shock protein; SubName: Full=Small cold-shock protein;[Mycobacterium leprae] Length = 136 Score = 206 bits (524), Expect = 7e-52 Identities = 99/116 (85%), Positives = 106/116 (91%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYDA+KGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFGVA+GRRGPQAL Sbjct: 1 MPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SLKLIDPPPS +R R EH+H+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLKLIDPPPSFARQVRREALAEHRHSPDELHGMVEDMITLLESTVQPELRKGRYPD 116 >tr|B8ZSS0|B8ZSS0_MYCLB Tax_Id=561304 (cspB)SubName: Full=Probable cold shock protein;[Mycobacterium leprae] Length = 136 Score = 206 bits (524), Expect = 7e-52 Identities = 99/116 (85%), Positives = 106/116 (91%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYDA+KGFGFLSQEDGEDVYVRSSALPAGVE LK+GQRVEFGVA+GRRGPQAL Sbjct: 1 MPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SLKLIDPPPS +R R EH+H+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLKLIDPPPSFARQVRREALAEHRHSPDELHGMVEDMITLLESTVQPELRKGRYPD 116 >tr|Q7U126|Q7U126_MYCBO Tax_Id=1765 (cspB)SubName: Full=PROBABLE COLD SHOCK-LIKE PROTEIN B CSPB;[Mycobacterium bovis] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|O53883|O53883_MYCTU Tax_Id=1773 (cspB)SubName: Full=Cold-shock domain family protein; SubName: Full=PROBABLE COLD SHOCK-LIKE PROTEIN B CSPB;[Mycobacterium tuberculosis] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|C1ALK5|C1ALK5_MYCBT Tax_Id=561275 (cspB)SubName: Full=Putative cold shock-like protein B;[Mycobacterium bovis] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|A5U0Q9|A5U0Q9_MYCTA Tax_Id=419947 (cspB)SubName: Full=Cold-shock domain family protein;[Mycobacterium tuberculosis] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|A1KH03|A1KH03_MYCBP Tax_Id=410289 (cspB)SubName: Full=Probable cold shock-like protein B cspB;[Mycobacterium bovis] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D6FNW9|D6FNW9_MYCTU Tax_Id=611304 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis K85] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D6F2E8|D6F2E8_MYCTU Tax_Id=611302 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis T46] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D5ZDT6|D5ZDT6_MYCTU Tax_Id=537210 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis T17] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D5Z1A9|D5Z1A9_MYCTU Tax_Id=537209 SubName: Full=Cold shock-like protein B cspB;[Mycobacterium tuberculosis GM 1503] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D5YD47|D5YD47_MYCTU Tax_Id=520140 SubName: Full=Cold-shock protein B cspB;[Mycobacterium tuberculosis EAS054] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D5Y1J8|D5Y1J8_MYCTU Tax_Id=520141 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis T85] Length = 135 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D5XRG7|D5XRG7_MYCTU Tax_Id=515617 SubName: Full=Cold shock protein B cspB; Flags: Fragment;[Mycobacterium tuberculosis T92] Length = 136 Score = 203 bits (517), Expect = 5e-51 Identities = 99/116 (85%), Positives = 107/116 (92%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|B1MJ10|B1MJ10_MYCA9 Tax_Id=561007 SubName: Full=Probable cold shock-like protein B CspB;[Mycobacterium abscessus] Length = 137 Score = 201 bits (510), Expect = 3e-50 Identities = 101/137 (73%), Positives = 109/137 (79%), Gaps = 1/137 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVE LK+GQ+VEFG+AAGRRGPQAL Sbjct: 1 MPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQKVEFGMAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERP-EHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDXXX 132 SLKLID PPS+ + RRE+ P HKHT DELHGM+EDMITLLE VQ ELRKGRYPD Sbjct: 61 SLKLIDAPPSVQKTRRESSGPVNHKHTTDELHGMIEDMITLLEGTVQTELRKGRYPDRKI 120 Query: 133 XXXXXXXXXXXXXELDA 149 ELDA Sbjct: 121 ARKVSEVVRAVASELDA 137 >tr|A4KFH7|A4KFH7_MYCTU Tax_Id=395095 SubName: Full=Cold shock-like protein B cspB;[Mycobacterium tuberculosis str. Haarlem] Length = 135 Score = 200 bits (508), Expect = 5e-50 Identities = 98/116 (84%), Positives = 106/116 (91%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP VEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTFVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSLSR RRE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLSRPRRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|D6FF37|D6FF37_MYCTU Tax_Id=611303 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis CPHL_A] Length = 135 Score = 199 bits (506), Expect = 9e-50 Identities = 97/116 (83%), Positives = 105/116 (90%), Gaps = 1/116 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLSQE GEDVYVRSSALP GVEALK+GQRVEFG+A+GRRGPQAL Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+LI+PPPSL R RE EHKH+PDELHGMVEDMITLLES VQPELRKGRYPD Sbjct: 61 SLRLIEPPPSLYRPHRE-PAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 115 >tr|C1ATL4|C1ATL4_RHOOB Tax_Id=632772 SubName: Full=Cold shock protein;[Rhodococcus opacus] Length = 139 Score = 191 bits (486), Expect = 2e-47 Identities = 92/119 (77%), Positives = 102/119 (85%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 + VPTGKVKWYD EKGFGFLSQE+GEDVYVRSSALP GVE LK+GQRVEFG+AAGRRGP Sbjct: 1 MNAVPTGKVKWYDVEKGFGFLSQEEGEDVYVRSSALPEGVEGLKAGQRVEFGMAAGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALSLK++DP PSL + E KHTPDELHGMVEDMITLLE+ VQP+LRKG+YPD Sbjct: 61 QALSLKVLDPAPSLRQNAARKEPSAKKHTPDELHGMVEDMITLLEAKVQPDLRKGKYPD 119 >tr|D0L5K3|D0L5K3_GORB4 Tax_Id=526226 SubName: Full=Cold-shock protein DNA-binding protein;[Gordonia bronchialis] Length = 155 Score = 191 bits (485), Expect = 2e-47 Identities = 94/121 (77%), Positives = 106/121 (87%), Gaps = 1/121 (0%) Query: 10 RVRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRG 69 RV TVPTGKVKWYDAEKGFGFL+QEDGEDVYVRSSALP GVE LK GQRVEFG+AAGRRG Sbjct: 15 RVSTVPTGKVKWYDAEKGFGFLAQEDGEDVYVRSSALPDGVEGLKPGQRVEFGMAAGRRG 74 Query: 70 PQALSLKLIDPPPSLSRARREAERPEHK-HTPDELHGMVEDMITLLESAVQPELRKGRYP 128 PQALS+ +++P PS+++ REA R E K H+PDELHGMV D+ITLLE VQP+LRKGRYP Sbjct: 75 PQALSVTVLEPAPSVAKNTREAARKEVKRHSPDELHGMVADLITLLEGKVQPDLRKGRYP 134 Query: 129 D 129 D Sbjct: 135 D 135 >tr|Q0S6U1|Q0S6U1_RHOSR Tax_Id=101510 SubName: Full=Probable cold shock protein;[Rhodococcus sp.] Length = 136 Score = 190 bits (482), Expect = 6e-47 Identities = 91/116 (78%), Positives = 101/116 (87%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD EKGFGFLSQE+GEDVYVRSSALP GVE LK+GQRVEFG+AAGRRGPQAL Sbjct: 1 MPTGKVKWYDVEKGFGFLSQEEGEDVYVRSSALPEGVEGLKAGQRVEFGMAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SLK++DP PSL + E KHTPDELHGMVEDMITLLE+ VQP+LRKG+YPD Sbjct: 61 SLKVLDPAPSLRQNAARKEPSAKKHTPDELHGMVEDMITLLEAKVQPDLRKGKYPD 116 >tr|C3JDZ8|C3JDZ8_RHOER Tax_Id=596309 SubName: Full=Cold-shock DNA-binding domain protein;[Rhodococcus erythropolis SK121] Length = 140 Score = 186 bits (473), Expect = 6e-46 Identities = 90/120 (75%), Positives = 102/120 (85%), Gaps = 1/120 (0%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 + VPTGKVKWYD EKGFGFLSQE+GEDVYVR+SALP GVE LK+GQRVEFG+AAGRRGP Sbjct: 1 MNAVPTGKVKWYDVEKGFGFLSQEEGEDVYVRASALPEGVEGLKAGQRVEFGMAAGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERP-EHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALSLK+++P PSL A P E KHTPD+LHGMVEDMITLLE+ VQP+LR G+YPD Sbjct: 61 QALSLKVLEPAPSLRGATATRREPVERKHTPDQLHGMVEDMITLLEAKVQPDLRNGKYPD 120 >tr|C0ZMT5|C0ZMT5_RHOE4 Tax_Id=234621 SubName: Full=Probable cold shock protein;[Rhodococcus erythropolis] Length = 137 Score = 185 bits (469), Expect = 2e-45 Identities = 89/117 (76%), Positives = 101/117 (86%), Gaps = 1/117 (0%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD EKGFGFLSQE+GEDVYVR+SALP GVE LK+GQRVEFG+AAGRRGPQAL Sbjct: 1 MPTGKVKWYDVEKGFGFLSQEEGEDVYVRASALPEGVEGLKAGQRVEFGMAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERP-EHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SLK+++P PSL A P E KHTPD+LHGMVEDMITLLE+ VQP+LR G+YPD Sbjct: 61 SLKVLEPAPSLRGATATRREPVERKHTPDQLHGMVEDMITLLEAKVQPDLRNGKYPD 117 >tr|Q5Z257|Q5Z257_NOCFA Tax_Id=37329 SubName: Full=Putative cold shock protein;[Nocardia farcinica] Length = 138 Score = 183 bits (465), Expect = 5e-45 Identities = 92/120 (76%), Positives = 102/120 (85%), Gaps = 6/120 (5%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTG+VKWYD EKGFGFLSQ++GEDVYVRSSALP GVE LK GQRVEFG+AAGRRGPQAL Sbjct: 1 MPTGRVKWYDVEKGFGFLSQDEGEDVYVRSSALPEGVEGLKPGQRVEFGMAAGRRGPQAL 60 Query: 74 SLKLIDPPPSL----SRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SLKLI+ PPSL R R+E P + TPDELHGMVEDMITLLE+ VQP+LRKGRYPD Sbjct: 61 SLKLIEAPPSLRQGQDRGRKEPSGP--RRTPDELHGMVEDMITLLETKVQPDLRKGRYPD 118 >tr|D5PXV8|D5PXV8_COREQ Tax_Id=525370 (cspB)SubName: Full=Cold-shock domain family protein;[Rhodococcus equi ATCC 33707] Length = 140 Score = 176 bits (446), Expect = 8e-43 Identities = 86/122 (70%), Positives = 104/122 (85%), Gaps = 5/122 (4%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 + TVPTGKVKWYD EKGFGFLSQE+GEDVYVR+SALP V+ LK+GQRVEF +AAGRRGP Sbjct: 1 MNTVPTGKVKWYDVEKGFGFLSQEEGEDVYVRASALPGDVDGLKAGQRVEFDMAAGRRGP 60 Query: 71 QALSLKLIDPPPSL---SRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRY 127 QAL ++L++P P+L S AR++A KH+PDELHGMVEDMITLLE+ +QP+LRKG+Y Sbjct: 61 QALKVQLLEPAPTLRQNSGARKDA--VARKHSPDELHGMVEDMITLLEAKIQPDLRKGKY 118 Query: 128 PD 129 PD Sbjct: 119 PD 120 >tr|D5UTV7|D5UTV7_TSUPA Tax_Id=521096 SubName: Full=Cold-shock DNA-binding domain protein;[Tsukamurella paurometabola DSM 20162] Length = 139 Score = 166 bits (420), Expect = 9e-40 Identities = 82/119 (68%), Positives = 97/119 (81%), Gaps = 3/119 (2%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYDAEKGFGFLSQE GEDVYVRSSALP+G + LK GQRVEF +AAGRRGPQAL Sbjct: 1 MPTGKVKWYDAEKGFGFLSQEGGEDVYVRSSALPSGTDELKQGQRVEFSMAAGRRGPQAL 60 Query: 74 SLKLIDPPPSLSR--ARREAERPEHKHTP-DELHGMVEDMITLLESAVQPELRKGRYPD 129 ++ +++P PS++R A + RP P DELHGM+EDMI LL+ +VQ ELRKGRYPD Sbjct: 61 TVTVLEPAPSVARGGAAQRTRRPAANRRPADELHGMIEDMIQLLDGSVQQELRKGRYPD 119 >tr|C6WHZ7|C6WHZ7_ACTMD Tax_Id=446462 SubName: Full=Cold-shock DNA-binding domain protein;[Actinosynnema mirum] Length = 131 Score = 160 bits (404), Expect = 6e-38 Identities = 78/119 (65%), Positives = 98/119 (82%), Gaps = 8/119 (6%) Query: 11 VRTVPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGP 70 +R VPTGKVKWYD+EKGFGF++Q+ GEDVYVR SALP GV+ALK+GQR+EFG+A GRRGP Sbjct: 1 MRAVPTGKVKWYDSEKGFGFVTQDGGEDVYVRKSALPEGVDALKAGQRIEFGMAEGRRGP 60 Query: 71 QALSLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 QALS++L+DP PS++ ARR RP DEL+ ++ED+I LLE VQPELR+ RYP+ Sbjct: 61 QALSVRLVDPAPSVAEARR---RP-----ADELNVVIEDLIRLLEQRVQPELRRSRYPE 111 >tr|A4F7B5|A4F7B5_SACEN Tax_Id=405948 SubName: Full=Cold-shock DNA-binding domain protein;[Saccharopolyspora erythraea] Length = 130 Score = 159 bits (403), Expect = 8e-38 Identities = 78/116 (67%), Positives = 97/116 (83%), Gaps = 8/116 (6%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTG+VKW+DAEKGFGF++Q+ GEDVYVR+SALP+GVE+LK+GQRV+F +A GRRGPQAL Sbjct: 1 MPTGRVKWFDAEKGFGFVTQDGGEDVYVRASALPSGVESLKTGQRVDFDMAQGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 ++L+DPPPS+ ARR RP DELHGMV+DMI LLE V P+LR+GRYPD Sbjct: 61 KVQLLDPPPSVVEARR---RP-----ADELHGMVDDMIKLLELKVLPDLRRGRYPD 108 >tr|C7N0G6|C7N0G6_SACVD Tax_Id=471857 SubName: Full=Cold-shock DNA-binding protein family;[Saccharomonospora viridis] Length = 128 Score = 157 bits (397), Expect = 4e-37 Identities = 76/116 (65%), Positives = 95/116 (81%), Gaps = 8/116 (6%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYDA+KGFGF++++ G DVYVR SALP GVE LK+GQR+EFG+A GRRGPQAL Sbjct: 1 MPTGKVKWYDADKGFGFVTEDGGRDVYVRKSALPQGVETLKAGQRLEFGIAEGRRGPQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 S++L+DP PS++ ARR RP +ELHG++EDMI LLE VQP LR+GRYP+ Sbjct: 61 SVRLLDPLPSVAEARR---RP-----AEELHGLIEDMIKLLEMRVQPVLRRGRYPE 108 >tr|D1VAH9|D1VAH9_9ACTO Tax_Id=298654 SubName: Full=Cold-shock DNA-binding domain protein;[Frankia sp. EuI1c] Length = 131 Score = 152 bits (384), Expect = 1e-35 Identities = 75/116 (64%), Positives = 95/116 (81%), Gaps = 5/116 (4%) Query: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 +PTGKVKWYD +KGFGFLS++DG DV+V +ALPAGVE L++G RVEFGVAAGR+G QAL Sbjct: 1 MPTGKVKWYDVDKGFGFLSRDDGGDVFVHKAALPAGVEKLRAGDRVEFGVAAGRKGDQAL 60 Query: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPD 129 SL+++ PPS+++A REA R +PDELH MVEDMI +L+ VQ +LR+GRYPD Sbjct: 61 SLRILAEPPSVAKAVREAAR----RSPDELHAMVEDMIKVLDD-VQRDLRRGRYPD 111 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.314 0.135 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 1,139,750,862 Number of extensions: 44467983 Number of successful extensions: 101070 Number of sequences better than 10.0: 6497 Number of HSP's gapped: 97760 Number of HSP's successfully gapped: 6704 Length of query: 149 Length of database: 4,236,830,644 Length adjustment: 112 Effective length of query: 37 Effective length of database: 2,835,949,876 Effective search space: 104930145412 Effective search space used: 104930145412 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 75 (33.5 bits)