BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_5774 (389 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R4B5|A0R4B5_MYCS2 Tax_Id=246196 SubName: Full=tRNA-dihydrou... 708 0.0 tr|A1TFA7|A1TFA7_MYCVP Tax_Id=350058 SubName: Full=Putative TIM-... 621 e-176 tr|A4T7F4|A4T7F4_MYCGI Tax_Id=350054 SubName: Full=Putative TIM-... 616 e-174 tr|Q1B3B8|Q1B3B8_MYCSS Tax_Id=164756 SubName: Full=Dihydrouridin... 610 e-172 tr|A1ULT2|A1ULT2_MYCSK Tax_Id=189918 SubName: Full=Putative TIM-... 610 e-172 tr|A3Q683|A3Q683_MYCSJ Tax_Id=164757 SubName: Full=Putative TIM-... 607 e-172 tr|B2HH06|B2HH06_MYCMM Tax_Id=216594 SubName: Full=Transcription... 597 e-169 tr|D5P7Z4|D5P7Z4_9MYCO Tax_Id=525368 SubName: Full=Dihydrouridin... 597 e-169 tr|A0PLD2|A0PLD2_MYCUA Tax_Id=362242 SubName: Full=Transcription... 593 e-167 tr|A0QAV6|A0QAV6_MYCA1 Tax_Id=243243 SubName: Full=Dihydrouridin... 589 e-166 tr|Q743C8|Q743C8_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 585 e-165 tr|B1MI27|B1MI27_MYCA9 Tax_Id=561007 SubName: Full=Probable tRNA... 579 e-163 sp|O53835|DUS_MYCTU Tax_Id=1773 (dus)RecName: Full=Probable tRNA... 577 e-163 tr|C6DVC8|C6DVC8_MYCTK Tax_Id=478434 SubName: Full=Transcription... 577 e-163 tr|A5WKJ2|A5WKJ2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 577 e-163 tr|A5U0L2|A5U0L2_MYCTA Tax_Id=419947 SubName: Full=NifR3/SMM1 fa... 577 e-163 tr|D6G0R2|D6G0R2_MYCTU Tax_Id=478435 SubName: Full=Transcription... 577 e-163 tr|D6FEY8|D6FEY8_MYCTU Tax_Id=611303 SubName: Full=Transcription... 577 e-163 tr|D6F294|D6F294_MYCTU Tax_Id=611302 SubName: Full=Transcription... 577 e-163 tr|D5ZDM8|D5ZDM8_MYCTU Tax_Id=537210 SubName: Full=Transcription... 577 e-163 tr|D5Z159|D5Z159_MYCTU Tax_Id=537209 SubName: Full=Transcription... 577 e-163 tr|D5XRB5|D5XRB5_MYCTU Tax_Id=515617 SubName: Full=Transcription... 577 e-163 tr|A2VGC3|A2VGC3_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 577 e-163 tr|Q7U170|Q7U170_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC... 574 e-162 tr|C1ALF8|C1ALF8_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 574 e-162 tr|A1KGV6|A1KGV6_MYCBP Tax_Id=410289 SubName: Full=Possible tran... 574 e-162 tr|D6FNR7|D6FNR7_MYCTU Tax_Id=611304 SubName: Full=Transcription... 574 e-162 tr|D5YPB8|D5YPB8_MYCTU Tax_Id=515616 SubName: Full=Transcription... 572 e-161 tr|D5Y1F2|D5Y1F2_MYCTU Tax_Id=520141 SubName: Full=Transcription... 572 e-161 tr|Q0S733|Q0S733_RHOSR Tax_Id=101510 SubName: Full=Probable tRNA... 560 e-157 tr|C1ATD3|C1ATD3_RHOOB Tax_Id=632772 SubName: Full=Putative tRNA... 557 e-157 tr|D0L3U2|D0L3U2_GORB4 Tax_Id=526226 SubName: Full=TIM-barrel pr... 556 e-156 tr|C0ZP03|C0ZP03_RHOE4 Tax_Id=234621 SubName: Full=Putative tRNA... 550 e-154 tr|C3JEH0|C3JEH0_RHOER Tax_Id=596309 SubName: Full=Putative tRNA... 550 e-154 tr|D5PYC9|D5PYC9_COREQ Tax_Id=525370 SubName: Full=Dihydrouridin... 549 e-154 sp|Q50049|DUS_MYCLE Tax_Id=1769 (dus)RecName: Full=Probable tRNA... 547 e-154 tr|B8ZST6|B8ZST6_MYCLB Tax_Id=561304 SubName: Full=Transcription... 547 e-154 tr|D5YBU8|D5YBU8_MYCTU Tax_Id=520140 SubName: Full=Transcription... 544 e-153 tr|A4KFD4|A4KFD4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 515 e-144 tr|C2CTC8|C2CTC8_CORST Tax_Id=525268 SubName: Full=Possible tRNA... 514 e-144 tr|Q4JXC2|Q4JXC2_CORJK Tax_Id=306537 SubName: Full=Putative unch... 510 e-142 tr|C0WH14|C0WH14_9CORY Tax_Id=525260 SubName: Full=Dihydrouridin... 505 e-141 tr|Q8FMP2|Q8FMP2_COREF Tax_Id=152794 SubName: Full=Putative tran... 504 e-141 tr|D5UX97|D5UX97_TSUPA Tax_Id=521096 SubName: Full=TIM-barrel pr... 504 e-141 tr|C8NK90|C8NK90_COREF Tax_Id=196164 SubName: Full=tRNA-dihydrou... 504 e-141 >tr|A0R4B5|A0R4B5_MYCS2 Tax_Id=246196 SubName: Full=tRNA-dihydrouridine synthase, putative; EC=1.-.-.-;[Mycobacterium smegmatis] Length = 389 Score = 708 bits (1827), Expect = 0.0 Identities = 354/389 (91%), Positives = 354/389 (91%) Query: 1 MSLTALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEM 60 MSLTALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEM Sbjct: 1 MSLTALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEM 60 Query: 61 VTARALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGC 120 VTARALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGC Sbjct: 61 VTARALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGC 120 Query: 121 PVPKVTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXX 180 PVPKVTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLD Sbjct: 121 PVPKVTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDAGRI 180 Query: 181 XXXXXXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAAT 240 QRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAAT Sbjct: 181 AAEEGAAAVALHARTAAQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAAT 240 Query: 241 GCDGVVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGM 300 GCDGVVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGM Sbjct: 241 GCDGVVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGM 300 Query: 301 RDIRKHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSA 360 RDIRKHVAWYLHGFPAGADLRRALALVKT APFPPAATGPRGRQGSA Sbjct: 301 RDIRKHVAWYLHGFPAGADLRRALALVKTRRELDELLDQLDRDAPFPPAATGPRGRQGSA 360 Query: 361 SSVHLPEGWLDDPDDCAVPVGADVMHSGG 389 SSVHLPEGWLDDPDDCAVPVGADVMHSGG Sbjct: 361 SSVHLPEGWLDDPDDCAVPVGADVMHSGG 389 >tr|A1TFA7|A1TFA7_MYCVP Tax_Id=350058 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium vanbaalenii] Length = 377 Score = 621 bits (1602), Expect = e-176 Identities = 307/377 (81%), Positives = 321/377 (85%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 ++IG IALHSPVVLAPMAGVTNVAFRTLCRELE++RAGTVSGLYVCEMVTARALVERHPV Sbjct: 1 MRIGPIALHSPVVLAPMAGVTNVAFRTLCRELELSRAGTVSGLYVCEMVTARALVERHPV 60 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTFAPEESPRSLQLYTVDP NTY AAKMIVDE+LADHIDMNFGCPVPKVT+RGGGA Sbjct: 61 TMHMTTFAPEESPRSLQLYTVDPANTYAAAKMIVDENLADHIDMNFGCPVPKVTRRGGGA 120 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALPYKRRLFGQI+ AAV ATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 121 ALPYKRRLFGQIIRAAVAATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAADEGAAAVALH 180 Query: 193 XXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCL 252 QRYSG+ADWEQIAALKAHVT IPVLGNGDIF+A DALAMMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGSADWEQIAALKAHVTNIPVLGNGDIFDARDALAMMAATGCDGVVIGRGCL 240 Query: 253 GRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLH 312 GRPWLFAELSAAFN TPPTLGEVA I+RRHGELL+ HFGEDKGMRDIRKHVAWY+H Sbjct: 241 GRPWLFAELSAAFNGTAPATPPTLGEVAQIIRRHGELLAAHFGEDKGMRDIRKHVAWYMH 300 Query: 313 GFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDD 372 GFPAGADLRR+LALVKT PFP AA GPRGRQGSA+SV LPEGWLDD Sbjct: 301 GFPAGADLRRSLALVKTISELDDLLDQLDPDVPFPAAANGPRGRQGSAASVTLPEGWLDD 360 Query: 373 PDDCAVPVGADVMHSGG 389 PDDC VP GADVMHSGG Sbjct: 361 PDDCTVPAGADVMHSGG 377 >tr|A4T7F4|A4T7F4_MYCGI Tax_Id=350054 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium gilvum] Length = 455 Score = 616 bits (1589), Expect = e-174 Identities = 304/378 (80%), Positives = 321/378 (84%) Query: 12 ALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHP 71 +L+IG L SPVVLAPMAGVTNVAFRTLCRELE++RAGTVSGLYVCEMVTARALVERHP Sbjct: 78 SLRIGPFDLRSPVVLAPMAGVTNVAFRTLCRELELSRAGTVSGLYVCEMVTARALVERHP 137 Query: 72 VTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGG 131 VTMHMTTFAPEESPRSLQLYTVDP NTY AAKMIVDE+LADHIDMNFGCPVPKVT+RGGG Sbjct: 138 VTMHMTTFAPEESPRSLQLYTVDPVNTYAAAKMIVDENLADHIDMNFGCPVPKVTRRGGG 197 Query: 132 AALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXX 191 AALPYKRRLFGQIV+AAVRATEGTDIPVTVKFRIGIDDEHHTHLD Sbjct: 198 AALPYKRRLFGQIVSAAVRATEGTDIPVTVKFRIGIDDEHHTHLDAGRIAAEEGAAAVAL 257 Query: 192 XXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGC 251 QRYSG+ADW+QIAALKAHVT +PVLGNGDIF+A DALAMMAATGCDGVVIGRGC Sbjct: 258 HARTAAQRYSGSADWDQIAALKAHVTNVPVLGNGDIFDARDALAMMAATGCDGVVIGRGC 317 Query: 252 LGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYL 311 LGRPWLFAELSAAF TPPTLGEVA I+RRHGELL+ HFGEDKGMRDIRKHVAWY+ Sbjct: 318 LGRPWLFAELSAAFTGATPATPPTLGEVAQIIRRHGELLAAHFGEDKGMRDIRKHVAWYM 377 Query: 312 HGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLD 371 HGFPAGADLRR++ALVKT PFP AA GPRGRQGSA+SV LPEGWLD Sbjct: 378 HGFPAGADLRRSMALVKTISELDDLLEQLDPDVPFPAAANGPRGRQGSAASVTLPEGWLD 437 Query: 372 DPDDCAVPVGADVMHSGG 389 DPDDC VP GADVMHSGG Sbjct: 438 DPDDCTVPAGADVMHSGG 455 >tr|Q1B3B8|Q1B3B8_MYCSS Tax_Id=164756 SubName: Full=Dihydrouridine synthase TIM-barrel protein nifR3;[Mycobacterium sp.] Length = 370 Score = 610 bits (1573), Expect = e-172 Identities = 298/368 (80%), Positives = 312/368 (84%) Query: 22 SPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPVTMHMTTFAP 81 SPVVLAPMAGVTNVAFRTLCRELE+ARAGTVSGLYVCEMVTARALVERHPVTMHMT FA Sbjct: 3 SPVVLAPMAGVTNVAFRTLCRELEVARAGTVSGLYVCEMVTARALVERHPVTMHMTAFAS 62 Query: 82 EESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGAALPYKRRLF 141 +ESPRSLQLYTVDP TY AAKMI DE++ADHIDMNFGCPVPKVTKRGGGAALPYKR+LF Sbjct: 63 DESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKVTKRGGGAALPYKRKLF 122 Query: 142 GQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXXXXXXXQRYS 201 GQIV AAV ATEGTDIPVTVKFRIGIDD HHTHLD QRYS Sbjct: 123 GQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEGAAAVALHARTAAQRYS 182 Query: 202 GTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCLGRPWLFAEL 261 GTADW+QIAALKAHVT +PVLGNGDIF+ADDALAMMAATGCDGVVIGRGCLGRPWLFAEL Sbjct: 183 GTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGVVIGRGCLGRPWLFAEL 242 Query: 262 SAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLHGFPAGADLR 321 SA F RP+P PPTLGEVADI+RRHGELL+ HFGEDK MRDIRKH+AWYLHGFPAG+DLR Sbjct: 243 SAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRKHIAWYLHGFPAGSDLR 302 Query: 322 RALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDDPDDCAVPVG 381 RALALVKT PFPPAATGPRGRQGSA+SV LPEGWL DPDDC VP G Sbjct: 303 RALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSLPEGWLTDPDDCTVPAG 362 Query: 382 ADVMHSGG 389 ADVMHSGG Sbjct: 363 ADVMHSGG 370 >tr|A1ULT2|A1ULT2_MYCSK Tax_Id=189918 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium sp.] Length = 370 Score = 610 bits (1573), Expect = e-172 Identities = 298/368 (80%), Positives = 312/368 (84%) Query: 22 SPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPVTMHMTTFAP 81 SPVVLAPMAGVTNVAFRTLCRELE+ARAGTVSGLYVCEMVTARALVERHPVTMHMT FA Sbjct: 3 SPVVLAPMAGVTNVAFRTLCRELEVARAGTVSGLYVCEMVTARALVERHPVTMHMTAFAS 62 Query: 82 EESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGAALPYKRRLF 141 +ESPRSLQLYTVDP TY AAKMI DE++ADHIDMNFGCPVPKVTKRGGGAALPYKR+LF Sbjct: 63 DESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKVTKRGGGAALPYKRKLF 122 Query: 142 GQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXXXXXXXQRYS 201 GQIV AAV ATEGTDIPVTVKFRIGIDD HHTHLD QRYS Sbjct: 123 GQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEGAAAVALHARTAAQRYS 182 Query: 202 GTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCLGRPWLFAEL 261 GTADW+QIAALKAHVT +PVLGNGDIF+ADDALAMMAATGCDGVVIGRGCLGRPWLFAEL Sbjct: 183 GTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGVVIGRGCLGRPWLFAEL 242 Query: 262 SAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLHGFPAGADLR 321 SA F RP+P PPTLGEVADI+RRHGELL+ HFGEDK MRDIRKH+AWYLHGFPAG+DLR Sbjct: 243 SAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRKHIAWYLHGFPAGSDLR 302 Query: 322 RALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDDPDDCAVPVG 381 RALALVKT PFPPAATGPRGRQGSA+SV LPEGWL DPDDC VP G Sbjct: 303 RALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSLPEGWLTDPDDCTVPAG 362 Query: 382 ADVMHSGG 389 ADVMHSGG Sbjct: 363 ADVMHSGG 370 >tr|A3Q683|A3Q683_MYCSJ Tax_Id=164757 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium sp.] Length = 370 Score = 607 bits (1566), Expect = e-172 Identities = 297/368 (80%), Positives = 311/368 (84%) Query: 22 SPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPVTMHMTTFAP 81 SPVVLAPMAGVTNVAFRTLCRELE+ARAGTVSGLYVCEMVTARALVERHPVTMHMT FA Sbjct: 3 SPVVLAPMAGVTNVAFRTLCRELEVARAGTVSGLYVCEMVTARALVERHPVTMHMTAFAS 62 Query: 82 EESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGAALPYKRRLF 141 +ESPRSLQLYTVDP TY AAKMI DE++ADHIDMNFGCPVPKVTKRGGGAALPYKR+LF Sbjct: 63 DESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKVTKRGGGAALPYKRKLF 122 Query: 142 GQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXXXXXXXQRYS 201 GQIV AAV ATEGTDIPVTVKFRIGIDD HHTHLD QRYS Sbjct: 123 GQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEGAAAVALHARTAAQRYS 182 Query: 202 GTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCLGRPWLFAEL 261 GTADW+QIAALKAHVT +PVLGNGDIF+ADDALAMMAATGCDGVVIGRGCLGRPWLFAEL Sbjct: 183 GTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGVVIGRGCLGRPWLFAEL 242 Query: 262 SAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLHGFPAGADLR 321 SA F RP+P PPTLGEVADI+RRHGELL+ HFGEDK MRDIRKH+AWYLHGFPAG+DLR Sbjct: 243 SAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRKHIAWYLHGFPAGSDLR 302 Query: 322 RALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDDPDDCAVPVG 381 RALALVKT PFPPAATGPRGRQGSA+SV LPEGWL DPDDC VP G Sbjct: 303 RALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSLPEGWLTDPDDCTVPAG 362 Query: 382 ADVMHSGG 389 A VMHSGG Sbjct: 363 AHVMHSGG 370 >tr|B2HH06|B2HH06_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulator;[Mycobacterium marinum] Length = 377 Score = 597 bits (1540), Expect = e-169 Identities = 296/377 (78%), Positives = 310/377 (82%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 ++IG I L SPVVLAPMAGVTNVAFRTLCRELE A+ GTVSGLYVCEMVTARALVERHPV Sbjct: 1 MRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTFAP+ESPRSLQLYTVDP+ TY AA+MI +E LADHIDMNFGCPVPKVTKRGGGA Sbjct: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALP+KRRLFGQIVAAAVR EGTDIPVTVKFRIGIDD HHTHLD Sbjct: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 180 Query: 193 XXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCL 252 QRYSGTADWEQIA LK HV +PVLGNGDI++A DALAMMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 Query: 253 GRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLH 312 GRPWLFAELSAAF P PTPPTLGEV DI+RRHGELL+ HFGEDKGMRDIRKHVAWYLH Sbjct: 241 GRPWLFAELSAAFTGNPGPTPPTLGEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 Query: 313 GFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDD 372 GFPAG+DLRRALALVKT FP AA GPRGRQGS S V LPEGWLDD Sbjct: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 Query: 373 PDDCAVPVGADVMHSGG 389 PDDC VP GADVMHSGG Sbjct: 361 PDDCQVPDGADVMHSGG 377 >tr|D5P7Z4|D5P7Z4_9MYCO Tax_Id=525368 SubName: Full=Dihydrouridine synthase;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 377 Score = 597 bits (1540), Expect = e-169 Identities = 294/377 (77%), Positives = 311/377 (82%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 ++IG I L SPVVLAPMAGVTNVAFRTLCRELE ++ GTVSGLYVCEMVTARALVERHPV Sbjct: 1 MRIGPITLASPVVLAPMAGVTNVAFRTLCRELERSKVGTVSGLYVCEMVTARALVERHPV 60 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTFAP+ESPRSLQLYTVDP TY AAKMIVDE LADHIDMNFGCPVPKVTKRGGGA Sbjct: 61 TMHMTTFAPDESPRSLQLYTVDPATTYAAAKMIVDEGLADHIDMNFGCPVPKVTKRGGGA 120 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALPYKRRLFGQIVAAAVRATEG IPVTVKFR+GIDDEHHTHLD Sbjct: 121 ALPYKRRLFGQIVAAAVRATEGARIPVTVKFRVGIDDEHHTHLDAGRIAESEGAAAVALH 180 Query: 193 XXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCL 252 QRYSGTADWEQIA LK HV IPVLGNGDI++A DAL MMA TGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQHVRTIPVLGNGDIYDASDALTMMATTGCDGVVIGRGCL 240 Query: 253 GRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLH 312 GRPWLFAELSAAF + P PTPPTLGEVADIVRRHG+LL+ HFGEDKGMRDIRKH+ WYLH Sbjct: 241 GRPWLFAELSAAFTDSPAPTPPTLGEVADIVRRHGKLLAAHFGEDKGMRDIRKHIGWYLH 300 Query: 313 GFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDD 372 GFPAG++LRRALA+VKT PFP AA+GPRGRQGS + V LPEGWL D Sbjct: 301 GFPAGSELRRALAMVKTLDELDSLLSQLDGTVPFPDAASGPRGRQGSPARVALPEGWLTD 360 Query: 373 PDDCAVPVGADVMHSGG 389 PDDC VP GADVMHSGG Sbjct: 361 PDDCTVPAGADVMHSGG 377 >tr|A0PLD2|A0PLD2_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulator;[Mycobacterium ulcerans] Length = 377 Score = 593 bits (1528), Expect = e-167 Identities = 293/377 (77%), Positives = 309/377 (81%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 ++IG I L SPV LAPMAGVTNVAFRTLCRELE A+ GTVSGLYVCEMVTARALVERHPV Sbjct: 1 MRIGPIELASPVALAPMAGVTNVAFRTLCRELEEAKVGTVSGLYVCEMVTARALVERHPV 60 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTFAP+ESPRSLQLYTVDP+ TY AA+MI +E LADHIDMNFGCPVPKVTKRGGGA Sbjct: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALP+KRRLFGQIVAAAVR EGTDIPVTVKFRIGIDD HHTHLD Sbjct: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 180 Query: 193 XXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCL 252 QRYSGTADWEQIA LK HV +PVLGNGDI++A DALAM+AATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMIAATGCDGVVIGRGCL 240 Query: 253 GRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLH 312 GRPWLFAELSAAF P PTPPTLGEV DI+RRHGELL+ HFGEDKG+RDIRKHVAWYLH Sbjct: 241 GRPWLFAELSAAFTGNPGPTPPTLGEVTDIIRRHGELLAAHFGEDKGVRDIRKHVAWYLH 300 Query: 313 GFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDD 372 GFPAG+DLRRALALVKT FP AA GPRGRQGS S V LPEGWLDD Sbjct: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPGVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 Query: 373 PDDCAVPVGADVMHSGG 389 PDDC VP GADVMHSGG Sbjct: 361 PDDCRVPDGADVMHSGG 377 >tr|A0QAV6|A0QAV6_MYCA1 Tax_Id=243243 SubName: Full=Dihydrouridine synthase;[Mycobacterium avium] Length = 377 Score = 589 bits (1518), Expect = e-166 Identities = 291/377 (77%), Positives = 308/377 (81%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 ++IG I L SPVVLAPMAGVTNVAFRTLCRELE GTVSGLYVCEMVTARALVERHP Sbjct: 1 MRIGPIELASPVVLAPMAGVTNVAFRTLCRELERELVGTVSGLYVCEMVTARALVERHPA 60 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTFAP+ESPRSLQLYTVDP TY AAKMI +E LADHIDMNFGCPVPKVTKRGGG+ Sbjct: 61 TMHMTTFAPDESPRSLQLYTVDPATTYAAAKMIANEGLADHIDMNFGCPVPKVTKRGGGS 120 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALPYKRRLFGQIVAAAVRAT+GT+IPVTVKFRIGID+EHHTHLD Sbjct: 121 ALPYKRRLFGQIVAAAVRATQGTEIPVTVKFRIGIDEEHHTHLDAGRIAEAEGAAAVALH 180 Query: 193 XXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCL 252 QRYSGTADWEQIA LK V IPVLGNGDI++A DAL MMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQQVRTIPVLGNGDIYDASDALTMMAATGCDGVVIGRGCL 240 Query: 253 GRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLH 312 GRPWLFAELSAAF P PTPPTLG+VADIVRRHG LL+ HFGEDKGMRDIRKH+AWYLH Sbjct: 241 GRPWLFAELSAAFTGSPPPTPPTLGQVADIVRRHGRLLAAHFGEDKGMRDIRKHIAWYLH 300 Query: 313 GFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDD 372 GFPAG++LRRALA+VKT PFP ATGPRGRQGS + V LPEGWLDD Sbjct: 301 GFPAGSELRRALAIVKTLDELDRLLDRLDGSVPFPDEATGPRGRQGSPARVVLPEGWLDD 360 Query: 373 PDDCAVPVGADVMHSGG 389 PDDC VP GADVMHSGG Sbjct: 361 PDDCTVPAGADVMHSGG 377 >tr|Q743C8|Q743C8_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 377 Score = 585 bits (1509), Expect = e-165 Identities = 290/377 (76%), Positives = 306/377 (81%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 ++IG I L SPVVLAPMAGVTNVAFRTLCRELE GTVSGLYV EMVTARALVERHP Sbjct: 1 MRIGPIELASPVVLAPMAGVTNVAFRTLCRELERELVGTVSGLYVYEMVTARALVERHPA 60 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHM TFAP+ESPRSLQLYTVDP TY AAKMI DE LADHIDMNFGCPVPKVTKRGGG+ Sbjct: 61 TMHMITFAPDESPRSLQLYTVDPATTYAAAKMIADEGLADHIDMNFGCPVPKVTKRGGGS 120 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALPYKRRLFGQIVAAAVRAT+GT+IPVTVKFRIGIDDEHHTHLD Sbjct: 121 ALPYKRRLFGQIVAAAVRATQGTEIPVTVKFRIGIDDEHHTHLDAGRIAEAEGAAAVALH 180 Query: 193 XXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCL 252 QRYSGTADWEQIA LK V IPVLGNGDI++A DAL MMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQQVRTIPVLGNGDIYDASDALTMMAATGCDGVVIGRGCL 240 Query: 253 GRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLH 312 GRPWLFAELSAAF P PTPPTLG+VADIVRRHG LL+ HFGEDKGMRDIRKH+AWYLH Sbjct: 241 GRPWLFAELSAAFTGSPPPTPPTLGQVADIVRRHGRLLAAHFGEDKGMRDIRKHIAWYLH 300 Query: 313 GFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDD 372 GFPAG++LRRALA+VKT PFP ATGPRGRQGS + V LPEGWLDD Sbjct: 301 GFPAGSELRRALAMVKTLDELDRLLDRLDGSVPFPDEATGPRGRQGSPARVVLPEGWLDD 360 Query: 373 PDDCAVPVGADVMHSGG 389 PDDC VP GAD+MHSGG Sbjct: 361 PDDCTVPAGADIMHSGG 377 >tr|B1MI27|B1MI27_MYCA9 Tax_Id=561007 SubName: Full=Probable tRNA-dihydrouridine synthase;[Mycobacterium abscessus] Length = 391 Score = 579 bits (1493), Expect = e-163 Identities = 286/385 (74%), Positives = 309/385 (80%), Gaps = 1/385 (0%) Query: 6 LDPARSA-LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 L ARS L+IGS+AL SPVVLAPMAGVTNVAFRTLCRELE+A GTVSGLYVCEMVTAR Sbjct: 7 LPEARSRELRIGSLALPSPVVLAPMAGVTNVAFRTLCRELELATTGTVSGLYVCEMVTAR 66 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL ERHPVT+HMTTF+PEESPRSLQLY+VDPE TY+AAKM+VDE LADHIDMNFGCPVPK Sbjct: 67 ALAERHPVTLHMTTFSPEESPRSLQLYSVDPETTYRAAKMVVDEGLADHIDMNFGCPVPK 126 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VT+ GGGAALPYKRRLFGQIVAAAVRAT GTDIPVTVKFR+GIDD+HHTHLD Sbjct: 127 VTRNGGGAALPYKRRLFGQIVAAAVRATAGTDIPVTVKFRVGIDDDHHTHLDAGAIAESE 186 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADW QIAALK HVT IPVLGNGDIF+A DA+AMM TGCDG Sbjct: 187 GAAAVALHARTASQRYSGTADWSQIAALKNHVTTIPVLGNGDIFDAADAVAMMEQTGCDG 246 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSA FN + IP PP LG+V I+RRH ELL HFGEDK +RD+R Sbjct: 247 VVIGRGCLGRPWLFAELSAVFNGQTIPAPPNLGQVTVIMRRHAELLVDHFGEDKALRDMR 306 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG D+RRALALV T APFP GPRGRQGS + V Sbjct: 307 KHIAWYLHGFPAGGDIRRALALVSTRAELDTLLEQLDQSAPFPEGGNGPRGRQGSPAKVS 366 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL+DPDDC VP ADVMHSGG Sbjct: 367 LPDGWLNDPDDCTVPSAADVMHSGG 391 >sp|O53835|DUS_MYCTU Tax_Id=1773 (dus)RecName: Full=Probable tRNA-dihydrouridine synthase; EC=1.-.-.-;[Mycobacterium tuberculosis] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|C6DVC8|C6DVC8_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A5WKJ2|A5WKJ2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A5U0L2|A5U0L2_MYCTA Tax_Id=419947 SubName: Full=NifR3/SMM1 family protein;[Mycobacterium tuberculosis] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D6G0R2|D6G0R2_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis KZN 605] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D6FEY8|D6FEY8_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis CPHL_A] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D6F294|D6F294_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T46] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D5ZDM8|D5ZDM8_MYCTU Tax_Id=537210 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T17] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D5Z159|D5Z159_MYCTU Tax_Id=537209 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis GM 1503] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D5XRB5|D5XRB5_MYCTU Tax_Id=515617 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T92] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A2VGC3|A2VGC3_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 389 Score = 577 bits (1488), Expect = e-163 Identities = 287/385 (74%), Positives = 310/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|Q7U170|Q7U170_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 389 Score = 574 bits (1479), Expect = e-162 Identities = 286/385 (74%), Positives = 309/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRG GAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGCGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|C1ALF8|C1ALF8_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 389 Score = 574 bits (1479), Expect = e-162 Identities = 286/385 (74%), Positives = 309/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRG GAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGCGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|A1KGV6|A1KGV6_MYCBP Tax_Id=410289 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium bovis] Length = 389 Score = 574 bits (1479), Expect = e-162 Identities = 286/385 (74%), Positives = 309/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRG GAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGCGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D6FNR7|D6FNR7_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis K85] Length = 389 Score = 574 bits (1479), Expect = e-162 Identities = 286/385 (74%), Positives = 309/385 (80%), Gaps = 1/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRG GAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGCGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ LRRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 364 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 365 LPDGWLTDPDDCRVPEGADAMGSGG 389 >tr|D5YPB8|D5YPB8_MYCTU Tax_Id=515616 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis 02_1987] Length = 388 Score = 572 bits (1473), Expect = e-161 Identities = 286/385 (74%), Positives = 309/385 (80%), Gaps = 2/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ RRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGS-ARRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 363 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 364 LPDGWLTDPDDCRVPEGADAMGSGG 388 >tr|D5Y1F2|D5Y1F2_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis T85] Length = 388 Score = 572 bits (1473), Expect = e-161 Identities = 286/385 (74%), Positives = 309/385 (80%), Gaps = 2/385 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVH 364 KH+AWYLHGFPAG+ RRALA+VKT PFP +ATG RGRQGS + V Sbjct: 305 KHIAWYLHGFPAGS-ARRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVA 363 Query: 365 LPEGWLDDPDDCAVPVGADVMHSGG 389 LP+GWL DPDDC VP GAD M SGG Sbjct: 364 LPDGWLTDPDDCRVPEGADAMGSGG 388 >tr|Q0S733|Q0S733_RHOSR Tax_Id=101510 SubName: Full=Probable tRNA-dihydrouridine synthase;[Rhodococcus sp.] Length = 380 Score = 560 bits (1443), Expect = e-157 Identities = 270/379 (71%), Positives = 302/379 (79%) Query: 11 SALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERH 70 S+L+IGS+ L SPVVLAPMAG+TNVAFRTLCRELE RAG+ SGLYVCEMVTARALVER Sbjct: 2 SSLRIGSLELRSPVVLAPMAGITNVAFRTLCRELETERAGSTSGLYVCEMVTARALVERQ 61 Query: 71 PVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGG 130 P T+HMTTF P E+PRSLQLYTVDP+ TY AAKMIVDE++ADHIDMNFGCPVPKVT++GG Sbjct: 62 PATLHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGG 121 Query: 131 GAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXX 190 GAALPYKR LFG+IVAAAV+ATEGTD+PVTVKFR+GID EHHTHLD Sbjct: 122 GAALPYKRTLFGRIVAAAVKATEGTDVPVTVKFRVGIDAEHHTHLDAGRIAAGEGAAAVA 181 Query: 191 XXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSGTADW +IA LK HVT +PVLGNGDIF A+DA MM TGCDGVV+GRG Sbjct: 182 LHARTASQRYSGTADWNEIARLKEHVTDVPVLGNGDIFAAEDAARMMEQTGCDGVVVGRG 241 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSAA N +P PTPP LGEVA I+RRH ELL+ H GEDKG+R++RKHV+WY Sbjct: 242 CLGRPWLFAELSAALNGKPQPTPPNLGEVATIIRRHAELLADHHGEDKGLRELRKHVSWY 301 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 L GFPAG++LR A+ALV T PFP A GPRGRQGS +V LPEGWL Sbjct: 302 LRGFPAGSELRVAMALVSTLTELDDLLVQLDPTIPFPKDAEGPRGRQGSPGTVALPEGWL 361 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDPDDC VP GAD+MHSGG Sbjct: 362 DDPDDCLVPAGADLMHSGG 380 >tr|C1ATD3|C1ATD3_RHOOB Tax_Id=632772 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus opacus] Length = 380 Score = 557 bits (1436), Expect = e-157 Identities = 268/379 (70%), Positives = 302/379 (79%) Query: 11 SALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERH 70 S+L+IGS+ L SPVVLAPMAG+TNVAFRTLCRELE RAG+ SGLYVCEMVTARALVER Sbjct: 2 SSLRIGSLELRSPVVLAPMAGITNVAFRTLCRELETERAGSTSGLYVCEMVTARALVERQ 61 Query: 71 PVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGG 130 P T+HMTTF P E+PRSLQLYTVDP+ TY AAKMIVDE++ADHIDMNFGCPVPKVT++GG Sbjct: 62 PATLHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGG 121 Query: 131 GAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXX 190 GAALPYKR LFG+IVAAAV+ATEGTD+PVTVKFR+GID +HHTHLD Sbjct: 122 GAALPYKRTLFGRIVAAAVKATEGTDVPVTVKFRVGIDADHHTHLDAGRIAAGEGAAAVA 181 Query: 191 XXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSGTADW +IA LK HVT +PVLGNGDIF A+DA MM TGCDGVV+GRG Sbjct: 182 LHARTASQRYSGTADWNEIARLKEHVTDVPVLGNGDIFAAEDAARMMEQTGCDGVVVGRG 241 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSAA N +P PTPP LGEVA I+RRH ELL+ H GEDKG+R++RKHV+WY Sbjct: 242 CLGRPWLFAELSAALNGKPQPTPPNLGEVATIIRRHAELLADHHGEDKGLRELRKHVSWY 301 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 L GFPAG++LR A+ALV T PFP A GPRGRQGS +V LPEGWL Sbjct: 302 LRGFPAGSELRVAMALVSTLTELDDLLVQLDPTIPFPKDAEGPRGRQGSPGTVALPEGWL 361 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+DC VP GAD+MHSGG Sbjct: 362 DDPEDCLVPAGADLMHSGG 380 >tr|D0L3U2|D0L3U2_GORB4 Tax_Id=526226 SubName: Full=TIM-barrel protein, nifR3 family;[Gordonia bronchialis] Length = 394 Score = 556 bits (1434), Expect = e-156 Identities = 280/388 (72%), Positives = 305/388 (78%) Query: 2 SLTALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMV 61 S+T + SAL+IGSI L SPVVLAPMAGVTNVAFRTLCRELEIAR GTVSGLYVCEMV Sbjct: 7 SITEGAGSASALRIGSIELASPVVLAPMAGVTNVAFRTLCRELEIARTGTVSGLYVCEMV 66 Query: 62 TARALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCP 121 TARALVERHPVTMHMTTFAPEESPRS+QLYTVDPE TY AAKMIVDEDLADHIDMNFGCP Sbjct: 67 TARALVERHPVTMHMTTFAPEESPRSMQLYTVDPEYTYAAAKMIVDEDLADHIDMNFGCP 126 Query: 122 VPKVTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXX 181 VPKVT++GGG+A+PYKR LF +IVAAAVRATEGTDIPVTVKFRIGIDDEH THLD Sbjct: 127 VPKVTRKGGGSAIPYKRTLFRKIVAAAVRATEGTDIPVTVKFRIGIDDEHRTHLDAGRIA 186 Query: 182 XXXXXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATG 241 QRYSG ADW++IA LK HVT +PVLGNGDIFE DA+ MM TG Sbjct: 187 AEEGAKAVALHARTASQRYSGQADWDEIARLKDHVTDVPVLGNGDIFEPVDAVEMMRRTG 246 Query: 242 CDGVVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMR 301 CDGVVIGRGCLGRPWLFAEL+A N PTPPTLGEVADI+ RH ELL H GE KG R Sbjct: 247 CDGVVIGRGCLGRPWLFAELAAEMNGVEAPTPPTLGEVADIIVRHCELLVAHHGEMKGCR 306 Query: 302 DIRKHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSAS 361 +IRKHVAWYL GFPAG++LRR +ALV+T PFP GPRGRQGS + Sbjct: 307 EIRKHVAWYLRGFPAGSELRRQMALVETVDQLRELVATLPADVPFPTDGHGPRGRQGSPA 366 Query: 362 SVHLPEGWLDDPDDCAVPVGADVMHSGG 389 V LP+GWLDDPD+ VP GA++MHSGG Sbjct: 367 KVALPDGWLDDPDEDVVPEGAEIMHSGG 394 >tr|C0ZP03|C0ZP03_RHOE4 Tax_Id=234621 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus erythropolis] Length = 380 Score = 550 bits (1416), Expect = e-154 Identities = 266/379 (70%), Positives = 298/379 (78%) Query: 11 SALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERH 70 S+L+IGS+ LHSPVVLAPMAGVTNVAFRTLCRELE+ RAG+ SGLYVCEMVTARALVER Sbjct: 2 SSLRIGSLELHSPVVLAPMAGVTNVAFRTLCRELELERAGSTSGLYVCEMVTARALVERQ 61 Query: 71 PVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGG 130 P TMHMTTF P E+PRSLQLYTVDP+ TY AAKMIVDE++ADHIDMNFGCPVPKVT++GG Sbjct: 62 PATMHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGG 121 Query: 131 GAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXX 190 G+ALPYKRRLFGQIVAAAVRATEGTDIPVTVK R+GID EHHTHLD Sbjct: 122 GSALPYKRRLFGQIVAAAVRATEGTDIPVTVKMRVGIDPEHHTHLDAGRIAAAEGAAAVA 181 Query: 191 XXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSGTADW +I LK HVT +P+LGNGDIF+A DA MM TGCDGVV+GRG Sbjct: 182 LHARTASQRYSGTADWNEITRLKEHVTDVPILGNGDIFDASDAARMMNETGCDGVVVGRG 241 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSAA N + I TPPTLGEV I+ RH +LL+ H GE KG+R++RKHV+WY Sbjct: 242 CLGRPWLFAELSAALNGQQIATPPTLGEVTKIIARHAQLLAAHHGEMKGLRELRKHVSWY 301 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 + GFP G+DLR ++ALV T PFP A GPRGRQGS V LPEGWL Sbjct: 302 MRGFPVGSDLRVSMALVSTLSELDDLLGQLDHDVPFPKDAEGPRGRQGSPGQVALPEGWL 361 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VPVGAD+MHSGG Sbjct: 362 DDPEDDLVPVGADMMHSGG 380 >tr|C3JEH0|C3JEH0_RHOER Tax_Id=596309 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus erythropolis SK121] Length = 380 Score = 550 bits (1416), Expect = e-154 Identities = 266/379 (70%), Positives = 298/379 (78%) Query: 11 SALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERH 70 S+L+IGS+ LHSPVVLAPMAGVTNVAFRTLCRELE+ RAG+ SGLYVCEMVTARALVER Sbjct: 2 SSLRIGSLELHSPVVLAPMAGVTNVAFRTLCRELELERAGSTSGLYVCEMVTARALVERQ 61 Query: 71 PVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGG 130 P TMHMTTF P E+PRSLQLYTVDP+ TY AAKMIVDE++ADHIDMNFGCPVPKVT++GG Sbjct: 62 PATMHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGG 121 Query: 131 GAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXX 190 G+ALPYKRRLFGQIVAAAVRATEGTDIPVTVK R+GID EHHTHLD Sbjct: 122 GSALPYKRRLFGQIVAAAVRATEGTDIPVTVKMRVGIDPEHHTHLDAGRIAAAEGAAAVA 181 Query: 191 XXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSGTADW +I LK HVT +P+LGNGDIF+A DA MM TGCDGVV+GRG Sbjct: 182 LHARTASQRYSGTADWNEITRLKEHVTDVPILGNGDIFDASDAARMMNETGCDGVVVGRG 241 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSAA N + I TPPTLGEV I+ RH +LL+ H GE KG+R++RKHV+WY Sbjct: 242 CLGRPWLFAELSAALNGQQIATPPTLGEVTKIIARHAQLLAAHHGEMKGLRELRKHVSWY 301 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 + GFP G+DLR ++ALV T PFP A GPRGRQGS V LPEGWL Sbjct: 302 MRGFPVGSDLRVSMALVSTLSELDDLLGQLDHDVPFPKDAEGPRGRQGSPGQVALPEGWL 361 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VPVGAD+MHSGG Sbjct: 362 DDPEDDLVPVGADMMHSGG 380 >tr|D5PYC9|D5PYC9_COREQ Tax_Id=525370 SubName: Full=Dihydrouridine synthase;[Rhodococcus equi ATCC 33707] Length = 380 Score = 549 bits (1415), Expect = e-154 Identities = 267/379 (70%), Positives = 299/379 (78%) Query: 11 SALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERH 70 S L+IGS+ L SPVVLAPMAG+TNVAFRTLCRELE+ RAG+ SGLYVCEMVTARALVERH Sbjct: 2 SPLRIGSLELGSPVVLAPMAGITNVAFRTLCRELELERAGSTSGLYVCEMVTARALVERH 61 Query: 71 PVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGG 130 PVTMHMTTF P E+PRSLQLYTVDPE TY+AAKMIVDE+LADHIDMNFGCPVPKVT++GG Sbjct: 62 PVTMHMTTFGPTETPRSLQLYTVDPEITYQAAKMIVDENLADHIDMNFGCPVPKVTRKGG 121 Query: 131 GAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXX 190 G+ALPYKRRLFGQIVAAAV+ATEGTDIPVTVK R+GID EHHTHLD Sbjct: 122 GSALPYKRRLFGQIVAAAVKATEGTDIPVTVKMRVGIDAEHHTHLDAGRIAAAEGAAAVA 181 Query: 191 XXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSG ADW +IA LK HVT +PVLGNGDIF A+DA MM+ TGCDGVV+GRG Sbjct: 182 LHGRTAAQRYSGQADWSEIARLKEHVTDVPVLGNGDIFAAEDAEKMMSETGCDGVVVGRG 241 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSAA N +P PP LGEVA I+ RHG LL+ H GEDKGMR++RKH+AWY Sbjct: 242 CLGRPWLFAELSAALNGTEMPVPPNLGEVAAIMMRHGRLLADHHGEDKGMREMRKHIAWY 301 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 + GFPAG++LR +A V + PFP A GPRGRQGS +V LP+GWL Sbjct: 302 MRGFPAGSELRNGMARVSSLAELEGFLGQLDPTVPFPKDAEGPRGRQGSPGTVALPDGWL 361 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VP GADVMHSGG Sbjct: 362 DDPEDTLVPAGADVMHSGG 380 >sp|Q50049|DUS_MYCLE Tax_Id=1769 (dus)RecName: Full=Probable tRNA-dihydrouridine synthase; EC=1.-.-.-;[Mycobacterium leprae] Length = 384 Score = 547 bits (1410), Expect = e-154 Identities = 274/384 (71%), Positives = 295/384 (76%), Gaps = 19/384 (4%) Query: 25 VLAPMAGVTNVAFRTLCRE-------------------LEIARAGTVSGLYVCEMVTARA 65 +LAPMAGVTNV FRTLCRE LE ++ GT+SGLYVCEMVTARA Sbjct: 1 MLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 Query: 66 LVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKV 125 LVER+ VT+HMTTFAP+ESPRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 Query: 126 TKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 185 T+RGGGAALPYKRRLFGQIVAAAVRATEGT IPVTVKFRIGIDDEHHTHLD Sbjct: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDAGRIAEAEG 180 Query: 186 XXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGV 245 QRYSGTADW QIA LK V IPVLGNGDI++A DALAMMA TGCDGV Sbjct: 181 AAAVALHARTAAQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 Query: 246 VIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRK 305 VIGRGCLGRPWLFAELSAAF RP P PPTLGEVA+IVRRHG+LL HFGEDKGMRDIRK Sbjct: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 Query: 306 HVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHL 365 H+AWYLHGFPAG++LR ALALVKT PFP AA GPRGRQGS + V L Sbjct: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 Query: 366 PEGWLDDPDDCAVPVGADVMHSGG 389 P+ WL DPDDC VP+GAD+M SGG Sbjct: 361 PDSWLTDPDDCTVPIGADIMESGG 384 >tr|B8ZST6|B8ZST6_MYCLB Tax_Id=561304 SubName: Full=Transcriptional regulator (NifR3/Smm1 family);[Mycobacterium leprae] Length = 384 Score = 547 bits (1410), Expect = e-154 Identities = 274/384 (71%), Positives = 295/384 (76%), Gaps = 19/384 (4%) Query: 25 VLAPMAGVTNVAFRTLCRE-------------------LEIARAGTVSGLYVCEMVTARA 65 +LAPMAGVTNV FRTLCRE LE ++ GT+SGLYVCEMVTARA Sbjct: 1 MLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 Query: 66 LVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKV 125 LVER+ VT+HMTTFAP+ESPRSLQLYTVDP TY AAKM+ DE LADHIDMNFGCP+PKV Sbjct: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 Query: 126 TKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXX 185 T+RGGGAALPYKRRLFGQIVAAAVRATEGT IPVTVKFRIGIDDEHHTHLD Sbjct: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDAGRIAEAEG 180 Query: 186 XXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGV 245 QRYSGTADW QIA LK V IPVLGNGDI++A DALAMMA TGCDGV Sbjct: 181 AAAVALHARTAAQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 Query: 246 VIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRK 305 VIGRGCLGRPWLFAELSAAF RP P PPTLGEVA+IVRRHG+LL HFGEDKGMRDIRK Sbjct: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 Query: 306 HVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHL 365 H+AWYLHGFPAG++LR ALALVKT PFP AA GPRGRQGS + V L Sbjct: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 Query: 366 PEGWLDDPDDCAVPVGADVMHSGG 389 P+ WL DPDDC VP+GAD+M SGG Sbjct: 361 PDSWLTDPDDCTVPIGADIMESGG 384 >tr|D5YBU8|D5YBU8_MYCTU Tax_Id=520140 SubName: Full=Transcriptional regulatory protein; Flags: Fragment;[Mycobacterium tuberculosis EAS054] Length = 362 Score = 544 bits (1402), Expect = e-153 Identities = 266/359 (74%), Positives = 288/359 (80%) Query: 31 GVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPVTMHMTTFAPEESPRSLQL 90 G ++AFR LCR+LE ++ GTVSGLYVCEMVTARAL+ERHPVTMHMTTF+ +ESPRSLQL Sbjct: 4 GSGDIAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQL 63 Query: 91 YTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGAALPYKRRLFGQIVAAAVR 150 YTVDP+ TY AA+MI E LADHIDMNFGCPVPKVTKRGGGAALP+KRRLFGQIVAAAVR Sbjct: 64 YTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVR 123 Query: 151 ATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXXXXXXXQRYSGTADWEQIA 210 ATEGTDIPVTVKFRIGIDD HHTHLD QRYSGTADWEQIA Sbjct: 124 ATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGTADWEQIA 183 Query: 211 ALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCLGRPWLFAELSAAFNNRPI 270 LK HV IPVLGNGDI++A DALAMM+ TGCDGVVIGRGCLGRPWLFAELSAAF P Sbjct: 184 RLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPA 243 Query: 271 PTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLHGFPAGADLRRALALVKTX 330 PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIRKH+AWYLHGFPAG+ LRRALA+VKT Sbjct: 244 PTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTF 303 Query: 331 XXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWLDDPDDCAVPVGADVMHSGG 389 PFP +ATG RGRQGS + V LP+GWL DPDDC VP GAD M SGG Sbjct: 304 DELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG 362 >tr|A4KFD4|A4KFD4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 339 Score = 515 bits (1326), Expect = e-144 Identities = 255/325 (78%), Positives = 275/325 (84%), Gaps = 1/325 (0%) Query: 5 ALDPARSALQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTAR 64 A+ P+ AL+IG I L SPVVLAPMAGVTNVAFR LCR+LE ++ GTVSGLYVCEMVTAR Sbjct: 6 AIQPS-PALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTAR 64 Query: 65 ALVERHPVTMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPK 124 AL+ERHPVTMHMTTF+ +ESPRSLQLYTVDP+ TY AA+MI E LADHIDMNFGCPVPK Sbjct: 65 ALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPK 124 Query: 125 VTKRGGGAALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXX 184 VTKRGGGAALP+KRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDD HHTHLD Sbjct: 125 VTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE 184 Query: 185 XXXXXXXXXXXXXQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDG 244 QRYSGTADWEQIA LK HV IPVLGNGDI++A DALAMM+ TGCDG Sbjct: 185 GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDG 244 Query: 245 VVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIR 304 VVIGRGCLGRPWLFAELSAAF P PTPPTLGEVADI+RRHG LL+ HFGEDKGMRDIR Sbjct: 245 VVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIR 304 Query: 305 KHVAWYLHGFPAGADLRRALALVKT 329 KH+AWYLHGFPAG+ LRRALA+VKT Sbjct: 305 KHIAWYLHGFPAGSALRRALAMVKT 329 >tr|C2CTC8|C2CTC8_CORST Tax_Id=525268 SubName: Full=Possible tRNA-dihydrouridine synthase;[Corynebacterium striatum ATCC 6940] Length = 381 Score = 514 bits (1324), Expect = e-144 Identities = 258/379 (68%), Positives = 285/379 (75%), Gaps = 2/379 (0%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 L IG I L+SPVVLAPMAGVTNVAFRTLCRE EI + GTVSGLYVCEMVTARALVER+ Sbjct: 3 LAIGKIELNSPVVLAPMAGVTNVAFRTLCREQEIEKTGTVSGLYVCEMVTARALVERNEK 62 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTF PEE+PRSLQLYTVDPE TYKAAKMIVDE+LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TMHMTTFGPEENPRSLQLYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALPYKRRLFG I+AAAV+ATEGTDIPVTVK R+GIDDEHHTHLD Sbjct: 123 ALPYKRRLFGNIIAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEGAAAVALH 182 Query: 193 XXXXXQRYSGTADWEQIAALKAHV--TGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSG ADW +IA LK H+ +GIPVLGNGDIF+A DA AMM TGCDGVV+GRG Sbjct: 183 GRTAAQRYSGHADWNEIARLKEHLADSGIPVLGNGDIFKATDARAMMEQTGCDGVVVGRG 242 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSA PIP PTLGEV + RH ELL++H GE + RDIRKHV WY Sbjct: 243 CLGRPWLFAELSAELRGEPIPAEPTLGEVTKTMIRHAELLAQHDGERQASRDIRKHVGWY 302 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 L GFP G ++R LA V++ A G RGRQGS + V LPEGWL Sbjct: 303 LRGFPVGGEVRSGLARVESVDNLRELLAPWANSQALADDADGARGRQGSPAKVVLPEGWL 362 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VP GA++MHSGG Sbjct: 363 DDPEDATVPEGAEIMHSGG 381 >tr|Q4JXC2|Q4JXC2_CORJK Tax_Id=306537 SubName: Full=Putative uncharacterized protein;[Corynebacterium jeikeium] Length = 389 Score = 510 bits (1313), Expect = e-142 Identities = 256/379 (67%), Positives = 287/379 (75%), Gaps = 2/379 (0%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 L+IG + L SPVVLAPMAGVTNVAFR+LCRE E R G+V+GLYVCEMVTARALVER+P Sbjct: 11 LKIGKMELDSPVVLAPMAGVTNVAFRSLCREQERERMGSVAGLYVCEMVTARALVERNPK 70 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 T+HMTTFAP+E PRSLQLYT DPE TYKAAKMIVDE+LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 71 TLHMTTFAPDEDPRSLQLYTTDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 130 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALPYKR+LFG IVAAAV+ATEGTDIPVTVK R+GIDDEHHTHLD Sbjct: 131 ALPYKRKLFGNIVAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEGAAAVALH 190 Query: 193 XXXXXQRYSGTADWEQIAALKAHV--TGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSG ADW +IA LK H+ TGIPVLGNGDIF+A DA AMM TGCDGVV+GRG Sbjct: 191 GRTAAQRYSGHADWNEIARLKEHLAHTGIPVLGNGDIFKATDARAMMEQTGCDGVVVGRG 250 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSA PIP+ PTLGEVA I+ RH ELL+ H GE K RD+RKH+ WY Sbjct: 251 CLGRPWLFAELSAELRGLPIPSEPTLGEVARIILRHAELLAAHDGEQKACRDLRKHMTWY 310 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 L GFPAG +LRR+L+ V + A G RGRQGS + V LPEGWL Sbjct: 311 LRGFPAGGELRRSLSRVSSLDELKSALAEVWDSPALAEDADGARGRQGSPAKVALPEGWL 370 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VP GAD+ +SGG Sbjct: 371 DDPEDETVPDGADIENSGG 389 >tr|C0WH14|C0WH14_9CORY Tax_Id=525260 SubName: Full=Dihydrouridine synthase;[Corynebacterium accolens ATCC 49725] Length = 381 Score = 505 bits (1300), Expect = e-141 Identities = 252/379 (66%), Positives = 282/379 (74%), Gaps = 2/379 (0%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 L+IG+ L SPV+LAPMAGVTNVAFRTLCRE E+AR GTVSGLYVCEMVTARALVER+ Sbjct: 3 LRIGNYDLSSPVILAPMAGVTNVAFRTLCREQELARTGTVSGLYVCEMVTARALVERNEK 62 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTFAP E PRSLQ+YTVDPE TYKAAK+IVDE+LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TMHMTTFAPNEDPRSLQIYTVDPEYTYKAAKIIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 ALPYKRRLFG IV+AAV+ATEGT+IPVTVK R+GIDDEHHTHLD Sbjct: 123 ALPYKRRLFGNIVSAAVKATEGTNIPVTVKMRVGIDDEHHTHLDAGRIAVDSGAAAVTLH 182 Query: 193 XXXXXQRYSGTADWEQIAALKAHV--TGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSG A W++IA LK H+ TG+PVLGNGDIF ADDA MM ATGCDGV +GRG Sbjct: 183 GRTAAQRYSGDARWDEIARLKEHLADTGVPVLGNGDIFRADDARRMMEATGCDGVQVGRG 242 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAEL AA IP PTLGEV ++ RH ELL++H GED RDIRKH+ WY Sbjct: 243 CLGRPWLFAELGAALRGESIPAEPTLGEVTQVILRHAELLAQHEGEDHASRDIRKHIGWY 302 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 L GFP G +R LA V + A G RGRQGS S V LP+GWL Sbjct: 303 LRGFPVGGQVRAGLAKVDSLESLRELLAPWADSDALAADADGARGRQGSPSKVALPDGWL 362 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VPVGAD+ +SGG Sbjct: 363 DDPEDEFVPVGADIYNSGG 381 >tr|Q8FMP2|Q8FMP2_COREF Tax_Id=152794 SubName: Full=Putative transcription regulator;[Corynebacterium efficiens] Length = 381 Score = 504 bits (1298), Expect = e-141 Identities = 251/379 (66%), Positives = 286/379 (75%), Gaps = 2/379 (0%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 L+IG L SPV+LAPMAGVTNVAFRTLCRE E+ R GT+SGLYVCEMVTARALVER+ Sbjct: 3 LKIGPFDLASPVILAPMAGVTNVAFRTLCREQEMQRTGTISGLYVCEMVTARALVERNEK 62 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 T+HMTTFAP+E+PRSLQLYTVDP+ TY+AAKMIVDE+LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TLHMTTFAPDENPRSLQLYTVDPQYTYEAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 A+PYKRRLF IV+AAVRATEGTDIPVTVKFR+GIDDEHHTHLD Sbjct: 123 AIPYKRRLFENIVSAAVRATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAGAKSVALH 182 Query: 193 XXXXXQRYSGTADWEQIAALKAHV--TGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSG ADW +IA LK H+ TG+PVLGNGDIF A+DA MM TGCDGVV+GRG Sbjct: 183 ARTAAQRYSGQADWNEIARLKEHLADTGVPVLGNGDIFAAEDATRMMEQTGCDGVVVGRG 242 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSAA PIP PTLGEV I+ RH ELL +H GE KG+RD+RKH+ WY Sbjct: 243 CLGRPWLFAELSAAVRGEPIPEEPTLGEVTRIILRHAELLMQHDGELKGIRDLRKHMGWY 302 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 L GFP G + R LA V T A G RGR+GS++ V LP+GWL Sbjct: 303 LRGFPVGGEFRANLARVSTYAELGELLAPWGTSTARAEDADGARGRKGSSAKVALPDGWL 362 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VPVGA++ +SGG Sbjct: 363 DDPEDDTVPVGAEMENSGG 381 >tr|D5UX97|D5UX97_TSUPA Tax_Id=521096 SubName: Full=TIM-barrel protein, nifR3 family;[Tsukamurella paurometabola DSM 20162] Length = 396 Score = 504 bits (1298), Expect = e-141 Identities = 257/388 (66%), Positives = 284/388 (73%), Gaps = 11/388 (2%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 L+IG L SPVVLAPMAGVTNVAFR+LCRELE AR GTV+GLYVCEMVTARALVERHPV Sbjct: 9 LRIGRFELDSPVVLAPMAGVTNVAFRSLCRELERARTGTVAGLYVCEMVTARALVERHPV 68 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 TMHMTTFAP+E PRSLQLYTVD TY+AA+MI +E LADH+DMNFGCPVPK+T+RGGG+ Sbjct: 69 TMHMTTFAPDEDPRSLQLYTVDAHYTYEAARMIAEEGLADHLDMNFGCPVPKITRRGGGS 128 Query: 133 ALPYKRRLFGQIVAAAVRATE----GTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXX 188 ALPYKR LF IV AAVR E G IPVTVKFRIGIDDEHHTHLD Sbjct: 129 ALPYKRNLFASIVDAAVRGIEDGGQGGRIPVTVKFRIGIDDEHHTHLDAGRIAAEQGAVA 188 Query: 189 XXXXXXXXXQRYSGTADWEQIAALKAHV-----TGIPVLGNGDIFEADDALAMMAATGCD 243 QRYSG ADW++IA LK HV +PVLGNGDIF A+DA+ MM TGCD Sbjct: 189 VALHARTAAQRYSGQADWDEIARLKEHVHHHFGDAVPVLGNGDIFAAEDAVTMMDRTGCD 248 Query: 244 GVVIGRGCLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDI 303 GVV+GRGCLGRPWLF+ELSAA N P+PTPP LGEV +I+ RHGELL+ H GEDKGMR+I Sbjct: 249 GVVVGRGCLGRPWLFSELSAALNGTPMPTPPNLGEVTEIMYRHGELLAAHHGEDKGMREI 308 Query: 304 RKHVAWYLHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSV 363 RKHVAWYL GFPAG +LR LA VKT PFP A GPRGRQG+ V Sbjct: 309 RKHVAWYLRGFPAGGELRTRLATVKTLTDLRALLDTLPRDVPFPKDAEGPRGRQGTPGKV 368 Query: 364 HLPEGWLDDP--DDCAVPVGADVMHSGG 389 LP+GWLDDP D A GA+ SGG Sbjct: 369 VLPDGWLDDPWEADAAAMPGAETETSGG 396 >tr|C8NK90|C8NK90_COREF Tax_Id=196164 SubName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-;[Corynebacterium efficiens YS-314] Length = 381 Score = 504 bits (1298), Expect = e-141 Identities = 251/379 (66%), Positives = 286/379 (75%), Gaps = 2/379 (0%) Query: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 L+IG L SPV+LAPMAGVTNVAFRTLCRE E+ R GT+SGLYVCEMVTARALVER+ Sbjct: 3 LKIGPFDLASPVILAPMAGVTNVAFRTLCREQEMQRTGTISGLYVCEMVTARALVERNEK 62 Query: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 T+HMTTFAP+E+PRSLQLYTVDP+ TY+AAKMIVDE+LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TLHMTTFAPDENPRSLQLYTVDPQYTYEAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDXXXXXXXXXXXXXXXX 192 A+PYKRRLF IV+AAVRATEGTDIPVTVKFR+GIDDEHHTHLD Sbjct: 123 AIPYKRRLFENIVSAAVRATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAGAKSVALH 182 Query: 193 XXXXXQRYSGTADWEQIAALKAHV--TGIPVLGNGDIFEADDALAMMAATGCDGVVIGRG 250 QRYSG ADW +IA LK H+ TG+PVLGNGDIF A+DA MM TGCDGVV+GRG Sbjct: 183 ARTAAQRYSGQADWNEIARLKEHLADTGVPVLGNGDIFAAEDATRMMEQTGCDGVVVGRG 242 Query: 251 CLGRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWY 310 CLGRPWLFAELSAA PIP PTLGEV I+ RH ELL +H GE KG+RD+RKH+ WY Sbjct: 243 CLGRPWLFAELSAAVRGEPIPEEPTLGEVTRIILRHAELLMQHDGELKGIRDLRKHMGWY 302 Query: 311 LHGFPAGADLRRALALVKTXXXXXXXXXXXXXXAPFPPAATGPRGRQGSASSVHLPEGWL 370 L GFP G + R LA V T A G RGR+GS++ V LP+GWL Sbjct: 303 LRGFPVGGEFRANLARVSTYAELGELLAPWGTSTARAEDADGARGRKGSSAKVALPDGWL 362 Query: 371 DDPDDCAVPVGADVMHSGG 389 DDP+D VPVGA++ +SGG Sbjct: 363 DDPEDDTVPVGAEMENSGG 381 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.321 0.137 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,066,096,118 Number of extensions: 122022255 Number of successful extensions: 288184 Number of sequences better than 10.0: 4305 Number of HSP's gapped: 278098 Number of HSP's successfully gapped: 4736 Length of query: 389 Length of database: 4,236,830,644 Length adjustment: 140 Effective length of query: 249 Effective length of database: 2,485,729,684 Effective search space: 618946691316 Effective search space used: 618946691316 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 82 (36.2 bits)