BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_5775 (722 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R4B6|A0R4B6_MYCS2 Tax_Id=246196 SubName: Full=LytR/CpsA/Psr... 1244 0.0 tr|A3Q684|A3Q684_MYCSJ Tax_Id=164757 SubName: Full=Cell envelope... 762 0.0 tr|A1TFA8|A1TFA8_MYCVP Tax_Id=350058 SubName: Full=Cell envelope... 758 0.0 tr|Q1B3B7|Q1B3B7_MYCSS Tax_Id=164756 SubName: Full=Cell envelope... 753 0.0 tr|A4T7F3|A4T7F3_MYCGI Tax_Id=350054 SubName: Full=Cell envelope... 753 0.0 tr|A1ULT3|A1ULT3_MYCSK Tax_Id=189918 SubName: Full=Cell envelope... 753 0.0 tr|B2HH07|B2HH07_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 654 0.0 tr|Q743C9|Q743C9_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 644 0.0 tr|A0QAV4|A0QAV4_MYCA1 Tax_Id=243243 SubName: Full=LytR/CpsA/Psr... 644 0.0 tr|Q7U171|Q7U171_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 640 0.0 tr|O53834|O53834_MYCTU Tax_Id=1773 SubName: Full=LytR/CpsA/Psr f... 640 0.0 tr|C6DVC7|C6DVC7_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 640 0.0 tr|C1ALF7|C1ALF7_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 640 0.0 tr|A5WKJ1|A5WKJ1_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 640 0.0 tr|A5U0L1|A5U0L1_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 640 0.0 tr|A1KGV5|A1KGV5_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 640 0.0 tr|D6G0R1|D6G0R1_MYCTU Tax_Id=478435 SubName: Full=Putative unch... 640 0.0 tr|D6FNR6|D6FNR6_MYCTU Tax_Id=611304 SubName: Full=Putative unch... 640 0.0 tr|D6FEY7|D6FEY7_MYCTU Tax_Id=611303 SubName: Full=Putative unch... 640 0.0 tr|D6F293|D6F293_MYCTU Tax_Id=611302 SubName: Full=Putative unch... 640 0.0 tr|D5ZDM7|D5ZDM7_MYCTU Tax_Id=537210 SubName: Full=Putative unch... 640 0.0 tr|D5Z158|D5Z158_MYCTU Tax_Id=537209 SubName: Full=Putative unch... 640 0.0 tr|D5YPB7|D5YPB7_MYCTU Tax_Id=515616 SubName: Full=Putative unch... 640 0.0 tr|D5YBU7|D5YBU7_MYCTU Tax_Id=520140 SubName: Full=Putative unch... 640 0.0 tr|D5Y1F1|D5Y1F1_MYCTU Tax_Id=520141 SubName: Full=LytR/CpsA/Psr... 640 0.0 tr|D5XRB4|D5XRB4_MYCTU Tax_Id=515617 SubName: Full=LytR/CpsA/Psr... 640 0.0 tr|A2VGC2|A2VGC2_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 640 0.0 tr|D5P7Z5|D5P7Z5_9MYCO Tax_Id=525368 SubName: Full=LytR/CpsA/Psr... 633 e-179 tr|B1MI26|B1MI26_MYCA9 Tax_Id=561007 SubName: Full=Putative tran... 607 e-171 tr|Q0S734|Q0S734_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 434 e-119 tr|C1ATD2|C1ATD2_RHOOB Tax_Id=632772 SubName: Full=Putative LytR... 425 e-116 tr|D5PYD1|D5PYD1_COREQ Tax_Id=525370 SubName: Full=LytR/CpsA/Psr... 421 e-115 tr|C3JEH1|C3JEH1_RHOER Tax_Id=596309 SubName: Full=LytR/CpsA/Psr... 404 e-110 tr|C0ZP04|C0ZP04_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR... 402 e-110 tr|Q5Z291|Q5Z291_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 386 e-105 tr|D0L3U3|D0L3U3_GORB4 Tax_Id=526226 SubName: Full=Cell envelope... 368 2e-99 tr|Q7WTY1|Q7WTY1_MYCSM Tax_Id=1772 SubName: Full=Putative unchar... 343 5e-92 tr|A4FQC4|A4FQC4_SACEN Tax_Id=405948 SubName: Full=Possible tran... 322 9e-86 tr|C7MRB8|C7MRB8_SACVD Tax_Id=471857 SubName: Full=Cell envelope... 276 8e-72 tr|C6WPQ9|C6WPQ9_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 266 6e-69 tr|C8XA49|C8XA49_NAKMY Tax_Id=479431 SubName: Full=Cell envelope... 249 1e-63 tr|Q47LW3|Q47LW3_THEFY Tax_Id=269800 SubName: Full=Cell envelope... 183 9e-44 tr|Q50048|Q50048_MYCLE Tax_Id=1769 SubName: Full=U2266o;[Mycobac... 182 2e-43 tr|D1AF98|D1AF98_THECD Tax_Id=471852 SubName: Full=Cell envelope... 174 5e-41 tr|A0LRX6|A0LRX6_ACIC1 Tax_Id=351607 SubName: Full=Cell envelope... 167 4e-39 >tr|A0R4B6|A0R4B6_MYCS2 Tax_Id=246196 SubName: Full=LytR/CpsA/Psr family protein;[Mycobacterium smegmatis] Length = 722 Score = 1244 bits (3219), Expect = 0.0 Identities = 629/722 (87%), Positives = 629/722 (87%) Query: 1 MNDPVDDDAEPTGNHADGVTVADLIAKVAGSDGXXXXXXXXXXXXXXXXXXXXXXXXXXX 60 MNDPVDDDAEPTGNHADGVTVADLIAKVAGSDG Sbjct: 1 MNDPVDDDAEPTGNHADGVTVADLIAKVAGSDGATPRRSRRRRAAEPDPEPEFEAQAEPA 60 Query: 61 XXXXXXXXXXXVAPEPPASADPTEVLQAIRYDEYPGDHAGEYPGDHPDAAYAGAADPNLD 120 VAPEPPASADPTEVLQAIRYDEYPGDHAGEYPGDHPDAAYAGAADPNLD Sbjct: 61 PKPTPEPEILPVAPEPPASADPTEVLQAIRYDEYPGDHAGEYPGDHPDAAYAGAADPNLD 120 Query: 121 AIFEPAFAPMPFAGVTAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAG 180 AIFEPAFAPMPFAGVTAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAG Sbjct: 121 AIFEPAFAPMPFAGVTAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAG 180 Query: 181 TDDFDEPHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSR 240 TDDFDEPHRRHPNRK GGAWQWQSSKNDSLNKVAALDLGSR Sbjct: 181 TDDFDEPHRRHPNRKAMIVGRAAAAMIAALTLVLTGGAWQWQSSKNDSLNKVAALDLGSR 240 Query: 241 DILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAV 300 DILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAV Sbjct: 241 DILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAV 300 Query: 301 SFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKV 360 SFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKV Sbjct: 301 SFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKV 360 Query: 361 IQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTA 420 IQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTA Sbjct: 361 IQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTA 420 Query: 421 LNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVD 480 LNYVRARQVTTEYNGDYGRIKRQQ KDTFFSLSKLNNVVNMFIADSYVD Sbjct: 421 LNYVRARQVTTEYNGDYGRIKRQQLFLSSLLRSLISKDTFFSLSKLNNVVNMFIADSYVD 480 Query: 481 NIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLP 540 NIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLP Sbjct: 481 NIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLP 540 Query: 541 GEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKV 600 GEKNPDNTPVPGTPESTTNT EMVDTVTTEPQQVTVKV Sbjct: 541 GEKNPDNTPVPGTPESTTNTAQAPQSTSPAPQPAHAAPAPGSAEMVDTVTTEPQQVTVKV 600 Query: 601 SNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAA 660 SNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAA Sbjct: 601 SNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAA 660 Query: 661 IERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADAT 720 IERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADAT Sbjct: 661 IERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADAT 720 Query: 721 CE 722 CE Sbjct: 721 CE 722 >tr|A3Q684|A3Q684_MYCSJ Tax_Id=164757 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium sp.] Length = 701 Score = 762 bits (1968), Expect = 0.0 Identities = 428/718 (59%), Positives = 479/718 (66%), Gaps = 92/718 (12%) Query: 10 EPTGNHADGV-TVADLIAKVAGSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 68 E G+H GV TVADLIAK+ G DG Sbjct: 71 ESGGSHTAGVVTVADLIAKLNG-DGSAPAELTPKRRR----------------------- 106 Query: 69 XXXVAPEPPASADPTEVLQAIRYDEYPGDHAGEYPGDHPDAAYAGAADPNLDAIFEPAFA 128 PEP A TE+++AIR + + EPA Sbjct: 107 ---AEPEPEPPAPETEIIEAIR-----------------------------EPVREPA-- 132 Query: 129 PMPFAGVTAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAGTDDF---- 184 D D DTEIIPA +A ADLP D R P G Sbjct: 133 ------------DPDRQDTEIIPAATSAYA-ADLPVLAEDPGDR-VPPYRVGDGGTVVAE 178 Query: 185 DEPHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDILD 244 DEPHRR R+ GGAWQWQ+SKN +N+V+ALD SRDI+D Sbjct: 179 DEPHRR---RRIILAGRAAAALLAVLALVLTGGAWQWQTSKNGLMNRVSALDQESRDIVD 235 Query: 245 PNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPR 304 PNAQFGDENFLIVG+DSR GENS MGAG+TDDA GARSDT+MLVNIPA+R+RVVAVSFPR Sbjct: 236 PNAQFGDENFLIVGVDSRIGENSGMGAGTTDDAAGARSDTVMLVNIPANRKRVVAVSFPR 295 Query: 305 DLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKI 364 DL+I PM+CEPW+PETG YGPI D S YG + VYTE KLNSA+A GGPKCLVKV+QK+ Sbjct: 296 DLSIDPMECEPWNPETGAYGPITDPESPMYGRETVYTEYKLNSAYAVGGPKCLVKVVQKL 355 Query: 365 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYV 424 SGLSVNRFMAVDFAGFSKMVDALGGVEVCST PLEDYELGTVL AGRQ+VDGHTALNYV Sbjct: 356 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTEPLEDYELGTVLPTAGRQMVDGHTALNYV 415 Query: 425 RARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKT 484 RARQVTTE NGDYGRIKRQQ K+ FFSLSKLNNVVNMFI DSYVDNI T Sbjct: 416 RARQVTTEINGDYGRIKRQQRFLSSLLRSLISKEVFFSLSKLNNVVNMFIDDSYVDNIDT 475 Query: 485 KDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKN 544 +DLV LGQS+QGV AGRI+FVT+PTTGYADE+GNE PR DD+RALF AIINDDPLPGEKN Sbjct: 476 RDLVTLGQSIQGVTAGRISFVTVPTTGYADEYGNETPRTDDMRALFTAIINDDPLPGEKN 535 Query: 545 PDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNST 604 PDNTPVPGTPESTT E+V+ VTTEPQ VTV+VSNST Sbjct: 536 PDNTPVPGTPESTT------------ADPEVAATESGGAELVNAVTTEPQDVTVQVSNST 583 Query: 605 GQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERV 664 GQ+GL AT A EL+Q+GFNVTTPDDYP L TTVFFSPGNE+AAATVASSF+N IERV Sbjct: 584 GQTGLGATTAEELQQYGFNVTTPDDYPSALTETTVFFSPGNEQAAATVASSFANPTIERV 643 Query: 665 AGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 +G+GD+VQVVLG D+ AV P+PSGS +QV ++ T STP LPEDL+VTNAAD TCE Sbjct: 644 SGMGDIVQVVLGNDYNAVAAPTPSGSPVQVNVLHDTGSTPAPLPEDLNVTNAADTTCE 701 >tr|A1TFA8|A1TFA8_MYCVP Tax_Id=350058 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium vanbaalenii] Length = 687 Score = 758 bits (1958), Expect = 0.0 Identities = 405/650 (62%), Positives = 460/650 (70%), Gaps = 32/650 (4%) Query: 76 PPASADPTEVLQAIRYDEYPGDHAGEYPGDHPDAAYAGAADPNLDAIFEPAFAPMPFAGV 135 PP+ + Y+ P H P+ A G +P L E P G+ Sbjct: 67 PPSEPTRHRAEPELDYEPEPERHG------QPEPAPYGQPEPGLYGQPELGRYGQPELGL 120 Query: 136 ---TAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAGTDDFDEPHRRHP 192 +PD D DT ++PA+ + ADLPD T P+ R P Sbjct: 121 GEEPEPYPDGDDLDTMVLPALDPS--RADLPDLTATRPPAHTLPKP----------RLRP 168 Query: 193 NRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDE 252 + + GGAWQWQS+KN+ LN+V+ALD SRDI+DPNAQFGDE Sbjct: 169 SGRIAVVGRVAAALVAVLALVLTGGAWQWQSAKNNLLNRVSALDPDSRDIVDPNAQFGDE 228 Query: 253 NFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMK 312 NFLIVG DSR GEN+ +GAG+T+DA GARSDT+MLVNIPA+R+RVVAVSFPRDL I PMK Sbjct: 229 NFLIVGTDSRLGENAGIGAGTTEDAAGARSDTVMLVNIPANRKRVVAVSFPRDLEIEPMK 288 Query: 313 CEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRF 372 CEPW+PET YGPI D S YG DE YTE KLNSAFA GGPKCLVKVIQK+SGL VNRF Sbjct: 289 CEPWNPETREYGPISDPESPMYGMDEAYTEYKLNSAFAVGGPKCLVKVIQKLSGLHVNRF 348 Query: 373 MAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTE 432 MAVDF GFSKMVDALGGVEVCSTTP+EDYELGTVLA AGRQIVDGHTALNYVRARQVTTE Sbjct: 349 MAVDFVGFSKMVDALGGVEVCSTTPIEDYELGTVLATAGRQIVDGHTALNYVRARQVTTE 408 Query: 433 YNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQ 492 NGDYGRIKRQQ K+TFFSLSKLNNVVNMFI DSYVDN+ TKDLVDLGQ Sbjct: 409 TNGDYGRIKRQQLFLSSLLRSLISKETFFSLSKLNNVVNMFIGDSYVDNVDTKDLVDLGQ 468 Query: 493 SVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPG 552 SVQGVNAGRITFVT+PT GYADEWGNE PR +D++ALFDAIINDDPLP E+N DNTPVPG Sbjct: 469 SVQGVNAGRITFVTVPTVGYADEWGNEIPRTEDMQALFDAIINDDPLPEERNADNTPVPG 528 Query: 553 TPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAAT 612 TPES TN E+VD +TT+PQ VTV+VSNSTG +GL +T Sbjct: 529 TPESLTN-----------PAPAQPDQGQSGGEIVDAITTDPQSVTVQVSNSTGSTGLGST 577 Query: 613 AAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQ 672 A L+ +GFNVTTPDDYPGPL TTVFFSPGNEEAAATVASSF++A IERVAG+ DVVQ Sbjct: 578 TADALQAYGFNVTTPDDYPGPLPRTTVFFSPGNEEAAATVASSFADATIERVAGMDDVVQ 637 Query: 673 VVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 VVLG+DF AV PSPSGS +QV ++RGT + T LPEDL+VTNAAD +C+ Sbjct: 638 VVLGSDFNAVTAPSPSGSPVQVHVIRGTKTPATTLPEDLTVTNAADTSCD 687 >tr|Q1B3B7|Q1B3B7_MYCSS Tax_Id=164756 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium sp.] Length = 699 Score = 753 bits (1943), Expect = 0.0 Identities = 426/718 (59%), Positives = 477/718 (66%), Gaps = 94/718 (13%) Query: 10 EPTGNHADGV-TVADLIAKVAGSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 68 E G+H GV TVADLIAK+ G DG Sbjct: 71 ESGGSHTAGVVTVADLIAKLNG-DGSAPAELTPKRRR----------------------- 106 Query: 69 XXXVAPEPPASADPTEVLQAIRYDEYPGDHAGEYPGDHPDAAYAGAADPNLDAIFEPAFA 128 PEP A TE+++AIR + + EPA Sbjct: 107 ---AEPEPEPPAPETEIIEAIR-----------------------------EPVREPA-- 132 Query: 129 PMPFAGVTAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAGTDDF---- 184 D D DTEIIPA +A ADLP D R P G Sbjct: 133 ------------DPDRQDTEIIPAATSAYA-ADLPVLAEDPGDR-VPPYRVGDGGTVVAE 178 Query: 185 DEPHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDILD 244 DEPHRR R+ GGAWQWQ+SKN +N+V+ALD SRDI+D Sbjct: 179 DEPHRR---RRIILAGRAAAALLAVLALVLTGGAWQWQTSKNGLMNRVSALDQESRDIVD 235 Query: 245 PNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPR 304 PNAQFGDENFLIVG+DSR GENS MGAG+TDDA GARSDT+MLVNIPA+R+RVVAVSFPR Sbjct: 236 PNAQFGDENFLIVGVDSRIGENSGMGAGTTDDAAGARSDTVMLVNIPANRKRVVAVSFPR 295 Query: 305 DLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKI 364 DL+I PM+CEPW+PETG YGPI D S YG + VYTE KLNSA+A GGPKCLVKV+QK+ Sbjct: 296 DLSIDPMECEPWNPETGAYGPITDPESPMYGRETVYTEYKLNSAYAVGGPKCLVKVVQKL 355 Query: 365 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYV 424 SGLSVNRFMAVDFAGFSKMVDALGGVEVCST PLEDYELGTVL AGRQ+VDGHTALNYV Sbjct: 356 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTEPLEDYELGTVLPTAGRQMVDGHTALNYV 415 Query: 425 RARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKT 484 RARQVTTE NGDYGRIKRQQ K+ FFSLSKLNNVVNMFI DSYVDNI T Sbjct: 416 RARQVTTEINGDYGRIKRQQRFLSSLLRSLISKEVFFSLSKLNNVVNMFIDDSYVDNIDT 475 Query: 485 KDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKN 544 +DLV LGQS+QGV AGRI+FVT+PTTGYADE+GNE PR DD+RALF AIINDDPLPGEKN Sbjct: 476 RDLVTLGQSIQGVTAGRISFVTVPTTGYADEYGNETPRTDDMRALFTAIINDDPLPGEKN 535 Query: 545 PDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNST 604 PDN VPGTPESTT E+V+ VTTEPQ VTV+VSNST Sbjct: 536 PDN--VPGTPESTT------------ADPEVAATESGGAELVNAVTTEPQDVTVQVSNST 581 Query: 605 GQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERV 664 GQ+GL AT A EL+Q+GFNVTTPDDYP L TTVFFSPGNE+AAATVASSF+N IERV Sbjct: 582 GQTGLGATTAEELQQYGFNVTTPDDYPSALTETTVFFSPGNEQAAATVASSFANPTIERV 641 Query: 665 AGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 +G+GD+VQVVLG D+ AV P+PSGS +QV ++ T STP LPEDL+VTNAAD TCE Sbjct: 642 SGMGDIVQVVLGNDYNAVAAPTPSGSPVQVNVLHDTGSTPAPLPEDLNVTNAADTTCE 699 >tr|A4T7F3|A4T7F3_MYCGI Tax_Id=350054 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium gilvum] Length = 649 Score = 753 bits (1943), Expect = 0.0 Identities = 392/600 (65%), Positives = 445/600 (74%), Gaps = 33/600 (5%) Query: 124 EPAFAPMPFAGVTAAHPDLDSCDTEIIPAV-PAADEHADLPDTHRDSWRRRTRPQHAGTD 182 EP P P+ PD DT ++P + P A E DL PQH Sbjct: 82 EPEPEPEPY-------PDTGEFDTTVLPVIDPRASELPDLEAPRP--------PQHVVA- 125 Query: 183 DFDEPHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDI 242 +P R H R+ GGAWQWQS+KN+ LN+V+ALD SRDI Sbjct: 126 ---KPVRSH--RRTVMAGRVAAALVAVLALVLTGGAWQWQSAKNNLLNRVSALDPDSRDI 180 Query: 243 LDPNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSF 302 +DPNAQFGDENFLIVG DSR G N+++GAG+T+DA GARSDT+MLVNIPA+RERVVAVSF Sbjct: 181 VDPNAQFGDENFLIVGTDSRLGSNAEIGAGTTEDAAGARSDTVMLVNIPANRERVVAVSF 240 Query: 303 PRDLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQ 362 PRDL I PMKCEPWDPET YGPI D S YG +EVYTE KLNSAFA GGPKCLVKVIQ Sbjct: 241 PRDLEIEPMKCEPWDPETREYGPIMDPESPMYGKEEVYTEYKLNSAFAVGGPKCLVKVIQ 300 Query: 363 KISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALN 422 K+SGL VNRFMAVDF GFSKMVDALGGVEVCSTTP+EDYELGTVL AGRQ+V+GHTALN Sbjct: 301 KLSGLHVNRFMAVDFVGFSKMVDALGGVEVCSTTPIEDYELGTVLPTAGRQVVNGHTALN 360 Query: 423 YVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNI 482 YVRARQVTTE NGDYGRIKRQQ K+TFFSLSKLNNVVNMFI DSYVDN+ Sbjct: 361 YVRARQVTTETNGDYGRIKRQQLFLSSLLRSLISKETFFSLSKLNNVVNMFIGDSYVDNV 420 Query: 483 KTKDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGE 542 TKDLVDLGQSVQGV AGRITF+T+PT GYADE+GNE PR DD+RALFDAIINDDPLP E Sbjct: 421 DTKDLVDLGQSVQGVTAGRITFITVPTVGYADEYGNEIPRTDDMRALFDAIINDDPLPEE 480 Query: 543 KNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSN 602 +NPDN+PVPGTPES E+VD +TT+PQ VTV+VSN Sbjct: 481 RNPDNSPVPGTPESLA-----------AEPGSGVDGEGPSDEIVDAITTDPQNVTVQVSN 529 Query: 603 STGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIE 662 STGQSGL ATA+ L+ HGFNV +PDDYPGPL+ TTVFFSPGNEEAAATVASSF +A +E Sbjct: 530 STGQSGLGATASTALQSHGFNVESPDDYPGPLEKTTVFFSPGNEEAAATVASSFGDATVE 589 Query: 663 RVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 R +GLGDVVQVVLG+DF +V PSPSGS++QV+++R T + T+LPEDL+VTNAAD +CE Sbjct: 590 RASGLGDVVQVVLGSDFNSVGAPSPSGSSVQVRIIRNTETPATELPEDLTVTNAADTSCE 649 >tr|A1ULT3|A1ULT3_MYCSK Tax_Id=189918 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium sp.] Length = 699 Score = 753 bits (1943), Expect = 0.0 Identities = 426/718 (59%), Positives = 477/718 (66%), Gaps = 94/718 (13%) Query: 10 EPTGNHADGV-TVADLIAKVAGSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 68 E G+H GV TVADLIAK+ G DG Sbjct: 71 ESGGSHTAGVVTVADLIAKLNG-DGSAPAELTPKRRR----------------------- 106 Query: 69 XXXVAPEPPASADPTEVLQAIRYDEYPGDHAGEYPGDHPDAAYAGAADPNLDAIFEPAFA 128 PEP A TE+++AIR + + EPA Sbjct: 107 ---AEPEPEPPAPETEIIEAIR-----------------------------EPVREPA-- 132 Query: 129 PMPFAGVTAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAGTDDF---- 184 D D DTEIIPA +A ADLP D R P G Sbjct: 133 ------------DPDRQDTEIIPAATSAYA-ADLPVLAEDPGDR-VPPYRVGDGGTVVAE 178 Query: 185 DEPHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDILD 244 DEPHRR R+ GGAWQWQ+SKN +N+V+ALD SRDI+D Sbjct: 179 DEPHRR---RRIILAGRAAAALLAVLALVLTGGAWQWQTSKNGLMNRVSALDQESRDIVD 235 Query: 245 PNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPR 304 PNAQFGDENFLIVG+DSR GENS MGAG+TDDA GARSDT+MLVNIPA+R+RVVAVSFPR Sbjct: 236 PNAQFGDENFLIVGVDSRIGENSGMGAGTTDDAAGARSDTVMLVNIPANRKRVVAVSFPR 295 Query: 305 DLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKI 364 DL+I PM+CEPW+PETG YGPI D S YG + VYTE KLNSA+A GGPKCLVKV+QK+ Sbjct: 296 DLSIDPMECEPWNPETGAYGPITDPESPMYGRETVYTEYKLNSAYAVGGPKCLVKVVQKL 355 Query: 365 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYV 424 SGLSVNRFMAVDFAGFSKMVDALGGVEVCST PLEDYELGTVL AGRQ+VDGHTALNYV Sbjct: 356 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTEPLEDYELGTVLPTAGRQMVDGHTALNYV 415 Query: 425 RARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKT 484 RARQVTTE NGDYGRIKRQQ K+ FFSLSKLNNVVNMFI DSYVDNI T Sbjct: 416 RARQVTTEINGDYGRIKRQQRFLSSLLRSLISKEVFFSLSKLNNVVNMFIDDSYVDNIDT 475 Query: 485 KDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKN 544 +DLV LGQS+QGV AGRI+FVT+PTTGYADE+GNE PR DD+RALF AIINDDPLPGEKN Sbjct: 476 RDLVTLGQSIQGVTAGRISFVTVPTTGYADEYGNETPRTDDMRALFTAIINDDPLPGEKN 535 Query: 545 PDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNST 604 PDN VPGTPESTT E+V+ VTTEPQ VTV+VSNST Sbjct: 536 PDN--VPGTPESTT------------ADPEVAATESGGAELVNAVTTEPQDVTVQVSNST 581 Query: 605 GQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERV 664 GQ+GL AT A EL+Q+GFNVTTPDDYP L TTVFFSPGNE+AAATVASSF+N IERV Sbjct: 582 GQTGLGATTAEELQQYGFNVTTPDDYPSALTETTVFFSPGNEQAAATVASSFANPTIERV 641 Query: 665 AGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 +G+GD+VQVVLG D+ AV P+PSGS +QV ++ T STP LPEDL+VTNAAD TCE Sbjct: 642 SGMGDIVQVVLGNDYNAVAAPTPSGSPVQVNVLHDTGSTPAPLPEDLNVTNAADTTCE 699 >tr|B2HH07|B2HH07_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 707 Score = 654 bits (1686), Expect = 0.0 Identities = 355/641 (55%), Positives = 429/641 (66%), Gaps = 34/641 (5%) Query: 98 HAGEYPGDHPDAAYAGAADPNLDAIFEPA---------FAPMPFAGVTAAHPDL------ 142 H P P A A AA D + EPA P + + PDL Sbjct: 85 HHHSAPESEPLPAPADAAPDIADQVHEPADEQLDTEVIAIPAYSLQLLSELPDLGSANYP 144 Query: 143 -DSCDTEIIPAVPAADEHADLPDTHRDSWRRRTRPQHAGTDDFDEPHRRHPNRKXXXXXX 201 D D E PAA A P R S + RP DEP R R Sbjct: 145 HDESDPESPDEQPAAPARARRPRLRRRSTAKTPRPGK------DEPKPRR--RPILLAGR 196 Query: 202 XXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDS 261 GGAW+W SSKN+ LN V+ALD S DI++P+ Q+GDENFLIVGMD+ Sbjct: 197 SLAALFAVLALVLTGGAWEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGDENFLIVGMDT 256 Query: 262 RFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETG 321 R G NS +GAG T+DA GARSDT+MLVNIPA+R+RVVAVSFPRDLAITP+KCE W+P+TG Sbjct: 257 RAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTG 316 Query: 322 TYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFS 381 YGPI+DE +G GP VYTETKLNS+F+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF+ Sbjct: 317 KYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFA 376 Query: 382 KMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIK 441 KMV ALGGVEVCSTTPL DYE+GTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIK Sbjct: 377 KMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIK 436 Query: 442 RQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGR 501 RQQ +DT F+L+KLNNVV+MFI DSYVDN+KTKDLV+LGQS+QG+ AG Sbjct: 437 RQQLFLSSLLRSLISEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELGQSLQGMAAGH 496 Query: 502 ITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTX 561 ITFVT+P TG DE G+E PR D++ALF AII+D+PLP E + + + P +T T Sbjct: 497 ITFVTVP-TGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRPTTTAPT- 554 Query: 562 XXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHG 621 + TT PQ+VTV+VSN TG +GLAATAA +LE++G Sbjct: 555 --------TAPKAPPASPADEVQHQQVTTTSPQEVTVQVSNGTGTTGLAATAASQLERNG 606 Query: 622 FNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMA 681 FNV PDDYP L TTV F+PGNE+AAATVA++F N+ +ERV G+G+VVQVVLG DF A Sbjct: 607 FNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKA 666 Query: 682 VNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 V P PSGS++ V++ R ++S P +LPEDL+VTNAAD TCE Sbjct: 667 VTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 >tr|Q743C9|Q743C9_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 674 Score = 644 bits (1661), Expect = 0.0 Identities = 328/507 (64%), Positives = 385/507 (75%), Gaps = 9/507 (1%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN + ALD S DI DP Q+GDE+FLIVG+DSR G+N+ MGAGSTD Sbjct: 177 GGAWQWSASKNARLNTINALDRNSSDIRDPGGQYGDEDFLIVGLDSRAGDNANMGAGSTD 236 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DADGARSDT+MLVNIPA+R+RVVAVSFPRDLAITPM+CE WDP TG YGPI+D + ++G Sbjct: 237 DADGARSDTVMLVNIPANRKRVVAVSFPRDLAITPMQCEAWDPSTGKYGPIYDPKTKSWG 296 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAFAFGGPKCLVK IQK+SGLS+N F+AVDFAGF+KMVDALGGVEVCS+ Sbjct: 297 PKMVYTETKLNSAFAFGGPKCLVKEIQKLSGLSINHFIAVDFAGFAKMVDALGGVEVCSS 356 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL + GRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 357 TPLHDYELGTVLEHGGRQVLDGDTALNYVRARQVTTEVNGDYGRIKRQQLFLSSLLRSLI 416 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT L+KLNNVVN+ I D+ VDN+K+KDLV LGQS+QG+ AG +TFVT+P TG D+ Sbjct: 417 SADTLLDLNKLNNVVNLVINDTVVDNVKSKDLVQLGQSLQGMAAGHVTFVTVP-TGVTDQ 475 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PRM D+RALFDAIINDDPLP E+N N STT Sbjct: 476 NGDEPPRMSDMRALFDAIINDDPLP-EENDQNAQNLSASGSTTGA-------PKAPTTRK 527 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P VTV+VSN+T QSGLAATA +L++ GFNV TPDDYP ++ Sbjct: 528 SPTPTPEPQREQVTTTSPSGVTVRVSNATTQSGLAATATSQLKRDGFNVMTPDDYPSSVN 587 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 TTV FSPGNEEAAATVASSF+NA ++RV+G G VVQVVLG DF +V PSPSGS + ++ Sbjct: 588 TTTVLFSPGNEEAAATVASSFANAKVQRVSGYGQVVQVVLGPDFKSVTAPSPSGSTMSLQ 647 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + RG+S+ P +LPEDL+VTNAAD TCE Sbjct: 648 IERGSSNAPAKLPEDLTVTNAADTTCE 674 >tr|A0QAV4|A0QAV4_MYCA1 Tax_Id=243243 SubName: Full=LytR/CpsA/Psr family protein;[Mycobacterium avium] Length = 662 Score = 644 bits (1661), Expect = 0.0 Identities = 328/507 (64%), Positives = 385/507 (75%), Gaps = 9/507 (1%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN + ALD S DI DP Q+GDE+FLIVG+DSR G+N+ MGAGSTD Sbjct: 165 GGAWQWSASKNARLNTINALDRNSSDIRDPGGQYGDEDFLIVGLDSRAGDNANMGAGSTD 224 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DADGARSDT+MLVNIPA+R+RVVAVSFPRDLAITPM+CE WDP TG YGPI+D + ++G Sbjct: 225 DADGARSDTVMLVNIPANRKRVVAVSFPRDLAITPMQCEAWDPSTGKYGPIYDPKTKSWG 284 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAFAFGGPKCLVK IQK+SGLS+N F+AVDFAGF+KMVDALGGVEVCS+ Sbjct: 285 PKMVYTETKLNSAFAFGGPKCLVKEIQKLSGLSINHFIAVDFAGFAKMVDALGGVEVCSS 344 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL + GRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 345 TPLHDYELGTVLEHGGRQVLDGDTALNYVRARQVTTEVNGDYGRIKRQQLFLSSLLRSLI 404 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT L+KLNNVVN+ I D+ VDN+K+KDLV LGQS+QG+ AG +TFVT+P TG D+ Sbjct: 405 SADTLLDLNKLNNVVNLVINDTVVDNVKSKDLVQLGQSLQGMAAGHVTFVTVP-TGVTDQ 463 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PRM D+RALFDAIINDDPLP E+N N STT Sbjct: 464 NGDEPPRMSDMRALFDAIINDDPLP-EENDQNAQNLSASGSTTGA-------PKAPTTRK 515 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P VTV+VSN+T QSGLAATA +L++ GFNV TPDDYP ++ Sbjct: 516 SPTPTPEPQREQVTTTSPSGVTVRVSNATTQSGLAATATSQLKRDGFNVMTPDDYPSSVN 575 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 TTV FSPGNEEAAATVASSF+NA ++RV+G G VVQVVLG DF +V PSPSGS + ++ Sbjct: 576 TTTVLFSPGNEEAAATVASSFANAKVQRVSGYGQVVQVVLGPDFKSVTAPSPSGSTMSLQ 635 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + RG+S+ P +LPEDL+VTNAAD TCE Sbjct: 636 IERGSSNAPAKLPEDLTVTNAADTTCE 662 >tr|Q7U171|Q7U171_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb0845c;[Mycobacterium bovis] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|O53834|O53834_MYCTU Tax_Id=1773 SubName: Full=LytR/CpsA/Psr family protein; SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|C6DVC7|C6DVC7_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|C1ALF7|C1ALF7_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|A5WKJ1|A5WKJ1_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|A5U0L1|A5U0L1_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|A1KGV5|A1KGV5_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_0875c;[Mycobacterium bovis] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D6G0R1|D6G0R1_MYCTU Tax_Id=478435 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis KZN 605] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D6FNR6|D6FNR6_MYCTU Tax_Id=611304 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis K85] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D6FEY7|D6FEY7_MYCTU Tax_Id=611303 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis CPHL_A] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D6F293|D6F293_MYCTU Tax_Id=611302 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T46] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D5ZDM7|D5ZDM7_MYCTU Tax_Id=537210 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis T17] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D5Z158|D5Z158_MYCTU Tax_Id=537209 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis GM 1503] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D5YPB7|D5YPB7_MYCTU Tax_Id=515616 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis 02_1987] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D5YBU7|D5YBU7_MYCTU Tax_Id=520140 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis EAS054] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D5Y1F1|D5Y1F1_MYCTU Tax_Id=520141 SubName: Full=LytR/CpsA/Psr family protein;[Mycobacterium tuberculosis T85] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D5XRB4|D5XRB4_MYCTU Tax_Id=515617 SubName: Full=LytR/CpsA/Psr family protein;[Mycobacterium tuberculosis T92] Length = 500 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 5 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 64 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 65 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 124 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 125 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 184 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 185 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 244 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 245 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 303 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 304 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 353 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 354 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 413 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 414 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 473 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 474 ISRNSSSPPTKLPEDLTVTNAADTTCE 500 >tr|A2VGC2|A2VGC2_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 684 Score = 640 bits (1652), Expect = 0.0 Identities = 324/507 (63%), Positives = 389/507 (76%), Gaps = 11/507 (2%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW +SKN LN V+ALD S DI++P+ Q GDENFL+VGMDSR G N+ +GAG + Sbjct: 189 GGAWQWSASKNSRLNMVSALDPHSGDIVNPSGQHGDENFLLVGMDSRAGANANIGAGDAE 248 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA GARSDT+MLVNIPASRERVVAVSFPRDLAITP++CE W+PETG YGPI+DE +GT G Sbjct: 249 DAGGARSDTVMLVNIPASRERVVAVSFPRDLAITPIQCEAWNPETGKYGPIYDEKTGTMG 308 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 P VYTETKLNSAF+FGGPKCLVKVIQK+SGLS+NRF+A+DF GF++MV+ALGGVEVCST Sbjct: 309 PRLVYTETKLNSAFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFARMVEALGGVEVCST 368 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TPL DYELGTVL +AGRQ++DG TALNYVRARQVTTE NGDYGRIKRQQ Sbjct: 369 TPLRDYELGTVLEHAGRQVIDGPTALNYVRARQVTTESNGDYGRIKRQQLFLSSLLRSMI 428 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 DT F+LS+LNNVVNMFI +SYVDN+KTKDLV+LG+S+Q + AG +TFVT+P TG D+ Sbjct: 429 STDTLFNLSRLNNVVNMFIGNSYVDNVKTKDLVELGRSLQHMAAGHVTFVTVP-TGITDQ 487 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXX 575 G+E PR D++ALF AII+DDPLP E + + + TP + T Sbjct: 488 NGDEPPRTSDMKALFTAIIDDDPLPLENDHNAQRLGNTPSTPPTT----------TKKAP 537 Query: 576 XXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLD 635 + TT P++VTV+VSNSTGQ+GLA TA +L+++GFNV PDDYP L Sbjct: 538 QAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATDQLKRNGFNVMAPDDYPSSLL 597 Query: 636 ATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVK 695 ATTVFFSPGNE+AAATVA+ F + IERV G+G +VQVVLG DF AV P PSGS + V+ Sbjct: 598 ATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVLGQDFSAVRAPLPSGSTVSVQ 657 Query: 696 LVRGTSSTPTQLPEDLSVTNAADATCE 722 + R +SS PT+LPEDL+VTNAAD TCE Sbjct: 658 ISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|D5P7Z5|D5P7Z5_9MYCO Tax_Id=525368 SubName: Full=LytR/CpsA/Psr family protein;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 666 Score = 633 bits (1633), Expect = e-179 Identities = 326/538 (60%), Positives = 392/538 (72%), Gaps = 7/538 (1%) Query: 185 DEPHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDILD 244 DE R H +R GGAWQW +SKN LN V ALD GS DI D Sbjct: 136 DERRRGHGHRPMLLAARSVAALLAVLAVAMTGGAWQWSTSKNARLNTVNALDQGSDDIRD 195 Query: 245 PNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPR 304 N Q+GDE+FLIVGMDSR G+N+ MGAG T+DA GARSDT+MLVNIPA+R+RVVAVSFPR Sbjct: 196 RNGQYGDEDFLIVGMDSRAGDNANMGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPR 255 Query: 305 DLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKI 364 DLAITP++CE W+P+TG YGP++D + T+GP VYTETKLNSAFAFGGPKCLVK IQK+ Sbjct: 256 DLAITPIQCEAWNPDTGKYGPLYDAKTKTWGPKMVYTETKLNSAFAFGGPKCLVKEIQKL 315 Query: 365 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYV 424 SGLS+NRF+A+DF+GF+KMVDALGGVEVCS + L DYELGTVL + GRQ++DG TALNYV Sbjct: 316 SGLSINRFIAIDFSGFAKMVDALGGVEVCSKSALHDYELGTVLEHGGRQVLDGPTALNYV 375 Query: 425 RARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKT 484 RARQVTTE NGDYGRIKRQQ +DT L+KLNNVVNMFI+D+ VDN+++ Sbjct: 376 RARQVTTETNGDYGRIKRQQLFLSSLLRSLISEDTLLDLNKLNNVVNMFISDTVVDNVQS 435 Query: 485 KDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKN 544 KDL+ LGQS+QG+ AG +TFVT+P TG D+ G+E PRM D+RALFDAIINDDPLP E+N Sbjct: 436 KDLIHLGQSLQGMAAGHVTFVTVP-TGITDQNGDEPPRMADMRALFDAIINDDPLP-EEN 493 Query: 545 PDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNST 604 N GT + + TT P VTV+VSN+T Sbjct: 494 DQNAKNLGTSDEKSGQTKAPATKKTPAPTAAPEARHE-----QVTTTTPGDVTVRVSNAT 548 Query: 605 GQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERV 664 QSGLAATA +L++ GFNV TPDDYP ++ TTV FSPGNE+AAATVASSF+NA ++RV Sbjct: 549 TQSGLAATATSQLKRDGFNVMTPDDYPSAVNTTTVLFSPGNEQAAATVASSFANAKVQRV 608 Query: 665 AGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 +G G VVQVVLG DF +V P PSGS+I +++ RG+ S P +LPEDL+VTNAAD TCE Sbjct: 609 SGYGQVVQVVLGPDFKSVATPQPSGSSISLQIERGSGSAPAKLPEDLTVTNAADTTCE 666 >tr|B1MI26|B1MI26_MYCA9 Tax_Id=561007 SubName: Full=Putative transcriptional regulator;[Mycobacterium abscessus] Length = 761 Score = 607 bits (1565), Expect = e-171 Identities = 315/514 (61%), Positives = 372/514 (72%), Gaps = 21/514 (4%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 GGAWQW + KN+ LN V ALD SRDI DPNAQ+GDENFLI+G+D+R G NS MGAG T Sbjct: 260 GGAWQWSNVKNNRLNHVEALDPNSRDIRDPNAQYGDENFLIIGVDTRAGANSAMGAGDTS 319 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 DA+G RSDT+MLVNIPA+R+RV VSFPRDLAI P CE +W+E + +YG Sbjct: 320 DAEGTRSDTMMLVNIPANRKRVAVVSFPRDLAIQPTLCE-----------VWNEDTKSYG 368 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 PD+ YTETKLNSAFAFGGPKCLVKVIQK+SGL++NRF+ VDFAGFSKMVDALGGVEVC+ Sbjct: 369 PDKAYTETKLNSAFAFGGPKCLVKVIQKMSGLNINRFLGVDFAGFSKMVDALGGVEVCTP 428 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 TP+EDYELGTVL NAGRQ +DGHTAL YVRARQVTTEYNGDYGRIKRQQ Sbjct: 429 TPIEDYELGTVLQNAGRQTIDGHTALQYVRARQVTTEYNGDYGRIKRQQLFLSSLLRSMI 488 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADE 515 +TFFSLSKLNNVVN FI DSYVDNI+TKDLVDLGQS+Q V AGRITF+T+PT G D Sbjct: 489 SHNTFFSLSKLNNVVNTFIDDSYVDNIRTKDLVDLGQSLQDVKAGRITFLTVPTDG-TDS 547 Query: 516 WGNEQPRMDDVRALFDAIINDDPLPGEKNPDNT--PVPGTPESTTN---TXXXXXXXXXX 570 GNE PR D+R +FDAIINDDPLPGE PD T P+PGT T + Sbjct: 548 EGNETPRTTDIRKIFDAIINDDPLPGELLPDGTRVPMPGTTTQDTTLAASEHGAASELGE 607 Query: 571 XXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDY 630 E VD VTTEP ++ V VSNSTGQ+GLAA+AA +L +GF +TT DDY Sbjct: 608 TSTAPPTPAATPTEQVDLVTTEPSEINVHVSNSTGQTGLAASAASQLSNYGFGITTTDDY 667 Query: 631 PGPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMA---VNPPSP 687 P L TTVFFSPG+E+ AATVA+SF A ++R+ G V+VVLG+D+ + + P Sbjct: 668 PSALPTTTVFFSPGHEQQAATVAASFGGAKLQRITGAQTTVRVVLGSDYASTANLQAPPA 727 Query: 688 SGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATC 721 +GS + ++L G + PT+LP DL+V NA D +C Sbjct: 728 AGSTVPLQLSSG-AMAPTELPMDLTVVNAGDTSC 760 >tr|Q0S734|Q0S734_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator, LytR family protein;[Rhodococcus sp.] Length = 682 Score = 434 bits (1116), Expect = e-119 Identities = 238/509 (46%), Positives = 308/509 (60%), Gaps = 38/509 (7%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 G W + S +++AALD S DI+D Q GDE +LIVG D+R G + ++GAG+ D Sbjct: 210 GIVWGYLRSTEGKFDQIAALDTESTDIVDAVGQTGDETYLIVGSDTRAGASGEVGAGTID 269 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGP-IWDEASGTY 334 DA+G+R+DT+MLVNIPA R RVVAVSFPRDL + C+ WD +GTY + A G Sbjct: 270 DAEGSRADTVMLVNIPADRSRVVAVSFPRDLDVERPVCQGWDNASGTYTEETFPAADGD- 328 Query: 335 GPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCS 394 KLN+ +A GGPKCLVKVIQK+SGL + F+ +DFAGF MV+ +GGV+VC+ Sbjct: 329 ---------KLNATYALGGPKCLVKVIQKLSGLKIGHFVGMDFAGFESMVNEIGGVKVCT 379 Query: 395 TTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXX 454 T PLED LGTVL AG Q++DG TALN+VRAR V E NGDYGRI RQQ Sbjct: 380 TQPLEDGVLGTVLPQAGTQMLDGKTALNFVRARHVEAEGNGDYGRINRQQRFLSALLRGA 439 Query: 455 XXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYAD 514 + SKLN +N F D++V+NI TK LV LG+S+Q V+AG +TF+T+PT G Sbjct: 440 LSSQVLLNPSKLNGFINAFTRDTFVENIDTKSLVTLGRSLQNVDAGAVTFLTVPTAG-TT 498 Query: 515 EWGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXX 574 EWGNE PR DD++A+F AII+D+ LPGEK + P+P PE Sbjct: 499 EWGNEIPRTDDIKAIFRAIIDDEALPGEKRAE--PLPSAPEPQA---------------- 540 Query: 575 XXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPL 634 + +P VTV+VSN++G+SGLAAT A L GF + +Y G Sbjct: 541 -------APAPLSVQAVDPSSVTVQVSNASGESGLAATVADSLAAEGFQIYNVGNYTGTS 593 Query: 635 DATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFM-AVNPPSPSGSAIQ 693 T V FSPG+E AAT+ASSF A +E GLG VV+V LG+DF V PSP + + Sbjct: 594 GETVVRFSPGHEAEAATLASSFPGAVLESTTGLGTVVEVALGSDFSGTVQTPSPIDTPLS 653 Query: 694 VKLVRGTSSTPTQLPEDLSVTNAADATCE 722 + VR ++P DL+V NA D +CE Sbjct: 654 MSGVREGQQEDVEIPADLAVVNAGDTSCE 682 >tr|C1ATD2|C1ATD2_RHOOB Tax_Id=632772 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus opacus] Length = 581 Score = 425 bits (1093), Expect = e-116 Identities = 234/513 (45%), Positives = 305/513 (59%), Gaps = 44/513 (8%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 G W + S +++AALD S DI+D Q GDE +LIVG D+R G + ++GAG+ D Sbjct: 107 GIVWGYLRSTEGKFDQIAALDTESTDIVDAVGQTGDETYLIVGTDTRAGASGEVGAGTID 166 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGP-IWDEASGTY 334 DA+G+R+DT+MLVNIPA R RVVAVSFPRDL + C+ WD ++GTY + A G Sbjct: 167 DAEGSRADTVMLVNIPADRSRVVAVSFPRDLDVERPVCQGWDNDSGTYTEETFPAADGD- 225 Query: 335 GPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCS 394 KLN+ +A GGPKCLVKVIQK+SGL + F+ +DFAGF MV+ +GGV+VC+ Sbjct: 226 ---------KLNATYALGGPKCLVKVIQKMSGLKIGHFVGMDFAGFESMVNEIGGVKVCT 276 Query: 395 TTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXX 454 T PLED LGTVL + G Q++DG TALN+VRAR V E NGDYGRI RQQ Sbjct: 277 TQPLEDDVLGTVLPHPGTQMLDGKTALNFVRARHVEAEGNGDYGRINRQQRFLSALLRGA 336 Query: 455 XXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYAD 514 + KLN +N F D++V+NI TK LV LG+S+Q V+AG +TF+T+PT G Sbjct: 337 LSSQVLLNPGKLNGFINAFTRDTFVENIDTKSLVTLGRSLQNVDAGAVTFLTVPTAG-TT 395 Query: 515 EWGNEQPRMDDVRALFDAIINDDPLPGEKN----PDNTPVPGTPESTTNTXXXXXXXXXX 570 EWGNE PR DD++A+F AII+D+ LPGEK P P P T T Sbjct: 396 EWGNEIPRTDDIKAIFRAIIDDEALPGEKRAEPLPSTAPEPQAAPPTPQT---------- 445 Query: 571 XXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDY 630 +P VTV+VSN++G+SGLAAT A L GF + +Y Sbjct: 446 -----------------VQAVDPSSVTVQVSNASGESGLAATVADTLAAEGFQIYNVGNY 488 Query: 631 PGPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFM-AVNPPSPSG 689 G T + FSPG+E AAT+ASSF A +E GLG VV+V +G+ F V PSP Sbjct: 489 TGTSSETVIRFSPGHEAEAATLASSFPGAVLEATTGLGTVVEVAIGSSFTGTVQTPSPID 548 Query: 690 SAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 + + V VR ++P DL+V NA D +C+ Sbjct: 549 TPLSVSDVRIGQPEDAEIPADLAVVNAGDTSCD 581 >tr|D5PYD1|D5PYD1_COREQ Tax_Id=525370 SubName: Full=LytR/CpsA/Psr family protein;[Rhodococcus equi ATCC 33707] Length = 659 Score = 421 bits (1083), Expect = e-115 Identities = 258/659 (39%), Positives = 345/659 (52%), Gaps = 67/659 (10%) Query: 81 DPTEVLQAIRYDEYPGDHAGEYPGDH---PDAAYAGAADPNLDAIFEP-AFAPMPFAGVT 136 DP+E L + G A G PD A G I EP A +P F Sbjct: 49 DPSEQLSVAELMQKMGRTAPVASGGRRARPDEAEDGDEIDEAPGIAEPEAQSPSGF---- 104 Query: 137 AAHPDLDSCDTEIIPAV----PAADEHADLPDTHRDSWRRRT----RPQHAGTDDFDE-- 186 D+ TEIIPAV PA P+ +W + PQ GT + Sbjct: 105 ------DAEATEIIPAVTDAPPADSWSGHAPEPEEPNWVEQAVTTASPQAVGTPNRSRLA 158 Query: 187 PHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKVAALDLGSRDILDPN 246 ++ RK G W + S +++AALD S DI+DP Sbjct: 159 ENKTRKRRKALVVGRSMVAFVAVMALLATGTVWGYLRSAEGRFSQIAALDTDSADIVDPG 218 Query: 247 AQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPRDL 306 Q GDEN+LIVG D+R G + +GAG+ +DA+GARSDT+MLV++PA R RVVAVSFPRDL Sbjct: 219 GQMGDENYLIVGTDTRAGASGAIGAGTVEDAEGARSDTVMLVHVPADRSRVVAVSFPRDL 278 Query: 307 AITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTET---KLNSAFAFGGPKCLVKVIQK 363 + C+ WD +TGTY DE Y KLN+ +A GGPKCLVKVIQK Sbjct: 279 DVERPVCQAWDNDTGTY------------TDETYPAADGDKLNATYALGGPKCLVKVIQK 326 Query: 364 ISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNY 423 +SGL + F+ +DFAGF MVD +GGV VC PL D ELG VL AG Q +DG AL+Y Sbjct: 327 MSGLQIKHFVGMDFAGFESMVDTVGGVNVCIPQPLIDGELGNVLPVAGNQTLDGRKALDY 386 Query: 424 VRARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIK 483 VRAR V E NGDYGRIKRQQ F KLN +N F ++V+ + Sbjct: 387 VRARHVEAEGNGDYGRIKRQQLFLSALLREAMSSKVLFDPGKLNGFINAFTRATFVEGVD 446 Query: 484 TKDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEK 543 T+ L+ LGQS++ V+AG +TF+T+PT G ++WGNE PR+DD++A+F AII+D PLPGE+ Sbjct: 447 TRSLLTLGQSLRNVDAGAVTFITVPTAG-TNDWGNEIPRLDDIKAIFQAIIDDQPLPGEE 505 Query: 544 NPDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNS 603 TP + + + + P++++V+VSN Sbjct: 506 RTSGDKKETTPAPAPD--------------------------ITELASAPEELSVQVSNG 539 Query: 604 TGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIER 663 +G SGLAA A L +GF + + +Y T V F+PG E AAT+AS+ A +E Sbjct: 540 SGVSGLAAGTADRLAAYGFGIYSVGNYSSTSRQTIVRFAPGLEAEAATLASAIPGAVLES 599 Query: 664 VAGLGDVVQVVLGTDF-MAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATC 721 +GLG +V+VVLGT+F + P+ G+ + R + +LP DL+VTNA D C Sbjct: 600 TSGLGSIVEVVLGTEFDGTLTAPAAPGTPVDSGPTRISVEEDAELPADLAVTNATDNPC 658 >tr|C3JEH1|C3JEH1_RHOER Tax_Id=596309 SubName: Full=LytR/CpsA/Psr family protein;[Rhodococcus erythropolis SK121] Length = 602 Score = 404 bits (1039), Expect = e-110 Identities = 222/516 (43%), Positives = 303/516 (58%), Gaps = 38/516 (7%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 G W + S +++AALD S DI+D Q GDE +LI+G D+R G + ++GAG+ + Sbjct: 116 GVVWGYLRSVEGGFDQIAALDTESDDIIDAGGQLGDETYLIIGTDTRAGASGEIGAGTVE 175 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTY-GPIWDEASGTY 334 DA+GAR+DT+MLVNIPA R RVVAVSFPRDL + C+ WD + G Y + ASG Sbjct: 176 DAEGARADTVMLVNIPADRSRVVAVSFPRDLDVERPICQGWDNDAGKYTSETFPAASGD- 234 Query: 335 GPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCS 394 KLN+ +A GGPKCLVKVIQK+SGL + F+ +DFAGF +MVD +GGV VCS Sbjct: 235 ---------KLNATYALGGPKCLVKVIQKMSGLKIGHFVGMDFAGFERMVDTVGGVNVCS 285 Query: 395 TTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXX 454 P+ED LGTVLA+ G Q++DG TALNYVRAR V E NGDYGRI RQQ Sbjct: 286 PGPIEDGILGTVLASGGTQMLDGRTALNYVRARHVEAEGNGDYGRITRQQKFLSALLRSA 345 Query: 455 XXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYAD 514 + SKLN +N F +D++V+NI TK LV LG+S+Q V+AG +TF+T+PT G + Sbjct: 346 LSNQVLLNPSKLNGFINAFTSDTFVENIDTKSLVTLGRSLQNVDAGAVTFLTVPTDG-TN 404 Query: 515 EWGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXX 574 +WGNE PR D++++LF AII+DDPLPGE+ D TP + +T T Sbjct: 405 DWGNEIPRTDEIKSLFQAIIDDDPLPGEEREDTTPSSTSSTTTAPT-------------- 450 Query: 575 XXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYP--- 631 ++V VSN++G +G AAT A L +GF ++T ++ Sbjct: 451 ----SSTPPAATSVEAMSAYNISVDVSNASGIAGQAATIADSLAAYGFQISTVGNFSAAT 506 Query: 632 ----GPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFM-AVNPPS 686 T V ++ G E A TVASS A + +GD+++VV+G++F V P+ Sbjct: 507 GLANAQASTTVVRYAAGYEAEAVTVASSIPGAVLVLAPSMGDMIEVVVGSNFAGTVVAPA 566 Query: 687 PSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 G+ + +ST T LP D++ NA D TC+ Sbjct: 567 DPGTILAANPTSVDTSTSTALPADIASVNAGDTTCD 602 >tr|C0ZP04|C0ZP04_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus erythropolis] Length = 530 Score = 402 bits (1034), Expect = e-110 Identities = 221/516 (42%), Positives = 303/516 (58%), Gaps = 38/516 (7%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 G W + S +++AALD S DI+D Q GDE +LI+G D+R G + ++GAG+ + Sbjct: 44 GVVWGYLRSVEGGFDQIAALDTESDDIIDAGGQLGDETYLIIGTDTRAGASGEIGAGTVE 103 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTY-GPIWDEASGTY 334 DA+GAR+DT+MLVNIPA R RVVAVSFPRDL + C+ WD + G Y + ASG Sbjct: 104 DAEGARADTVMLVNIPADRSRVVAVSFPRDLDVERPICQGWDNDAGKYTSETFPAASGD- 162 Query: 335 GPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCS 394 KLN+ +A GGPKCLVKVIQK+SGL + F+ +DFAGF +MVD +GGV VCS Sbjct: 163 ---------KLNATYALGGPKCLVKVIQKMSGLKIGHFVGMDFAGFERMVDTVGGVNVCS 213 Query: 395 TTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXX 454 P+ED LGTVLA+ G Q++DG TALNYVRAR V E NGDYGRI RQQ Sbjct: 214 PGPIEDGILGTVLASGGTQMLDGRTALNYVRARHVEAEGNGDYGRITRQQKFLSALLRSA 273 Query: 455 XXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYAD 514 + SKLN +N F +D++V+NI TK LV LG+S+Q V+AG +TF+T+PT G + Sbjct: 274 LSNQVLLNPSKLNGFINAFTSDTFVENIDTKSLVTLGRSLQNVDAGAVTFLTVPTDG-TN 332 Query: 515 EWGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXX 574 +WGNE PR D++++LF AII+D+PLPGE+ D TP + +T T Sbjct: 333 DWGNEIPRTDEIKSLFQAIIDDEPLPGEEREDTTPSSTSSTTTPPT-------------- 378 Query: 575 XXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYP--- 631 ++V VSN++G +G AAT A L +GF ++T ++ Sbjct: 379 ----SSTPPAATSVEAMSAYNISVDVSNASGIAGQAATIADSLAAYGFQISTVGNFSAAT 434 Query: 632 ----GPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFM-AVNPPS 686 T V ++ G E A TVASS A + +GD+++VV+G++F V P+ Sbjct: 435 GLANAQASTTVVRYAAGYEAEAVTVASSIPGAVLVLAPSMGDMIEVVVGSNFAGTVVAPA 494 Query: 687 PSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 G+ + +ST T LP D++ NA D TC+ Sbjct: 495 DPGTILAANPTSVDTSTSTALPADIASVNAGDTTCD 530 >tr|Q5Z291|Q5Z291_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 837 Score = 386 bits (992), Expect = e-105 Identities = 256/678 (37%), Positives = 337/678 (49%), Gaps = 74/678 (10%) Query: 73 APEPPASA-DPTEVLQAIRYDEYPGDHA-GEYPGDHPDAAYAGAADPNLDAIFE-PAFAP 129 AP P+ A DP A E P + P P+ + P +D I A AP Sbjct: 204 APATPSRATDPRAASPAAPRQEAPSARRPAQPPTARPEPGRRSKSSPIVDDITGGQAAAP 263 Query: 130 MPFAGVTAAHPDLDSCD----TEIIPAV------------PAADEHADLPDTHRDSWRRR 173 P +G A P D T+IIP V P D+ AD PD + Sbjct: 264 KPTSGRRHAEPVAPPEDAEEVTDIIPPVAEPEPARNAMGWPTTDDVADEPD-------KP 316 Query: 174 TRPQHAGTDDFDE--PHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNK 231 P+ + R+ R+ GG W + S + + Sbjct: 317 AEPKAVPSPPLSRLAASRQRRTRRAKAFGRSAAALSAVLALLITGGGWSYLRSTGNDFTQ 376 Query: 232 VAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIP 291 V+ALD S DI+D +AQ GDEN+L+VG D+R G N Q+GAG+ DDA+G+R+DT MLV+IP Sbjct: 377 VSALDENSEDIVDSDAQLGDENYLLVGTDTRAGANGQLGAGTLDDAEGSRADTTMLVHIP 436 Query: 292 ASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAF 351 +R RVV VSFPRDL +T KC WD + + A G KLN+ +A Sbjct: 437 KARNRVVIVSFPRDLDVTRPKCNGWDGDKTYTKETFPPAIGD----------KLNAVYAL 486 Query: 352 GGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAG 411 GGP+CLV IQ+++G S+N F+A+DFAGF MVD + GVEVC+T PL D LGT+L G Sbjct: 487 GGPQCLVSTIQRLTGASINHFIAIDFAGFEAMVDKIDGVEVCATKPLVDDVLGTILEKPG 546 Query: 412 RQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVN 471 +Q ++G TAL YVRAR V E DY RI RQQ + F L KLN + Sbjct: 547 KQRINGETALKYVRARHVYGEERSDYDRINRQQRFLASLLRGALSSNVFLDLGKLNGFIK 606 Query: 472 MFIADSYVD-NIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALF 530 F A + VD K +DL+ LG+S+Q ++AG +TF+T+PT G +GNE PR D++A+F Sbjct: 607 EFTAHTMVDETTKPEDLLTLGRSLQKLDAGTVTFLTVPTAG-TTAYGNEIPRESDIKAIF 665 Query: 531 DAIINDDPLPGEK--NPDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDT 588 AI +D PLPGEK P + P P T +T Sbjct: 666 KAIRDDQPLPGEKPTTPADAPAPAPAAPTPSTY--------------------------- 698 Query: 589 VTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATT-VFFSPGNEE 647 +P V++ VSN +G GLA TAA +L+ HGF + +Y ATT V + G E Sbjct: 699 TAVDPSTVSLLVSNGSGYDGLARTAATKLDNHGFTIYNVSNYANGTSATTKVRYGAGLEA 758 Query: 648 AAATVASSFSNAAIERVAGLGDVVQVVLGTDF---MAVNPPSPSGSAI-QVKLVRGTSST 703 AATVAS+ A IE LG +V+VV+GTD + V P+P G I V S Sbjct: 759 EAATVASAVPGATIEAADDLGGIVEVVVGTDSANGVTVQAPTPVGDVISNVATSTSVESA 818 Query: 704 PTQLPEDLSVTNAADATC 721 P LP DL NAAD C Sbjct: 819 PAVLPADLEHVNAADEIC 836 >tr|D0L3U3|D0L3U3_GORB4 Tax_Id=526226 SubName: Full=Cell envelope-related function transcriptional attenuator, LytR/CpsA family;[Gordonia bronchialis] Length = 734 Score = 368 bits (945), Expect = 2e-99 Identities = 209/524 (39%), Positives = 297/524 (56%), Gaps = 55/524 (10%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 G W + + N + + A+D +I + Q+GDE +LIVG D+R G NS++GAG T Sbjct: 247 GFVWGYLKNWNGAWRTITAVDPDDANIRNKEGQYGDETYLIVGTDTRGGNNSRVGAGDTS 306 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYG 335 + +GARSDT++LVNIPA+R RVVAVSFPRDL + C+ W+ + G+YG A+G Sbjct: 307 EVEGARSDTVILVNIPANRSRVVAVSFPRDLQVDRPDCKQWNNDAGSYGDTLYGATGV-- 364 Query: 336 PDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCST 395 KLNS +A GGP+CLV+ + +SGL++N F+A+DF GF K+V+A+GGV+VCST Sbjct: 365 --------KLNSVYADGGPQCLVRTLTAMSGLNINHFIAMDFYGFEKVVNAVGGVDVCST 416 Query: 396 TPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXX 455 T L DYELG +L G Q + G ALNYVRAR + +E NGDYGRIKRQQ Sbjct: 417 TSLYDYELGDILKRPGHQTLKGRKALNYVRARTIASEGNGDYGRIKRQQLFMSSLLRSVL 476 Query: 456 XKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYA-D 514 + + +KLN +VN FI SYVD + T+ L+DL +S++G++AG+++F+T+PTTG A D Sbjct: 477 SNNVLSNPAKLNTIVNTFIRYSYVDGVNTESLLDLAESMEGIDAGKVSFITVPTTGTATD 536 Query: 515 EWGNEQPRMDDVRALFDAIINDDPLPGE----------------KNPDNTPVPGTPESTT 558 NE P + + A+F+AII+D PLP E + +TP P TPE+ T Sbjct: 537 GSNNELPNTEGIDAIFNAIIDDQPLPREGGRKASTPGSSTTTSTDDSSSTPPPTTPETPT 596 Query: 559 NTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELE 618 V V V+V N TG++GLA + +L Sbjct: 597 R--------------------------VSATAQNAANVGVRVLNGTGRTGLAGEVSQQLA 630 Query: 619 QHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTD 678 GF+V D T V + PG ++AAAT+A++ A I+ + V+V+LG+ Sbjct: 631 NSGFDVRGVADASESRTDTVVRYGPGQQDAAATLAATIPGATIQSDRTVRSGVEVILGSG 690 Query: 679 FM-AVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATC 721 F ++ GSA+ V + S LP DL++TNA D TC Sbjct: 691 FTGSIGSVPEVGSAVSVDQL-PPSVRANNLPNDLAITNAGDTTC 733 >tr|Q7WTY1|Q7WTY1_MYCSM Tax_Id=1772 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 200 Score = 343 bits (880), Expect = 5e-92 Identities = 177/200 (88%), Positives = 177/200 (88%) Query: 523 MDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXX 582 MDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNT Sbjct: 1 MDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTAQAPQSTSPAPQPAHAAPAPGS 60 Query: 583 XEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFS 642 EMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFS Sbjct: 61 AEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFS 120 Query: 643 PGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSS 702 PGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSS Sbjct: 121 PGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSS 180 Query: 703 TPTQLPEDLSVTNAADATCE 722 TPTQLPEDLSVTNAADATCE Sbjct: 181 TPTQLPEDLSVTNAADATCE 200 >tr|A4FQC4|A4FQC4_SACEN Tax_Id=405948 SubName: Full=Possible transcriptional regulator, LytR family;[Saccharopolyspora erythraea] Length = 748 Score = 322 bits (826), Expect = 9e-86 Identities = 196/510 (38%), Positives = 263/510 (51%), Gaps = 55/510 (10%) Query: 217 GAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTDD 276 GA W K +VA+LD S DI D Q GD+NFL++G D+R G + G G+T+D Sbjct: 287 GAKTWVDGK---FREVASLDPNSGDIKDAAKQTGDQNFLLIGSDTRAGATADDGVGNTED 343 Query: 277 ADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYGP 336 GAR+DT M+ +IPA R RVV VSFPRDL + CE WD TG Y +G P Sbjct: 344 EPGARADTTMIAHIPADRSRVVVVSFPRDLEVAIPACERWDAATGRY-------TGVQAP 396 Query: 337 DEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTT 396 + + KLN A+A GGPKC KVIQ++SGLS+ F+ +DF GF MVDA+ GV++C+ Sbjct: 397 AQ--EKAKLNQAYAVGGPKCTTKVIQQLSGLSITSFLGIDFQGFKSMVDAVHGVDICTQK 454 Query: 397 PLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXXXX 456 P+ D +GTVL N G + G AL+YVRAR V + DYGR++RQQ Sbjct: 455 PVVDDVIGTVLPNPGHYNLTGQQALSYVRARHVQGDVTADYGRMQRQQLFLSALLRKTMS 514 Query: 457 KDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADEW 516 +KL+ VN A+++ +N+ T L++LGQS+QG++ ++TFVT+PTTGYA++ Sbjct: 515 SQVLLDPNKLSGFVNAVAANTFGENVGTDRLLELGQSMQGLDPSKVTFVTVPTTGYANDD 574 Query: 517 GNEQPRMDDVRALFDAIIN----DDPLPGEKNPDNTPVPGT-PESTTNTXXXXXXXXXXX 571 G E+ R D ALF AII P G +TP GT P +T T Sbjct: 575 GREELRAADNDALFRAIIEGVPVTPPASGGGTGGSTPSGGTGPMATAFTAHPLP------ 628 Query: 572 XXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYP 631 +P QV V+V N+TG G A T L + GFNVT Sbjct: 629 ------------------AIQPSQVKVEVVNTTGSGGSAGTTGDRLREFGFNVTGTGQSG 670 Query: 632 GPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSA 691 T + SP N EAA +ASS A + A G V+++ LG F Sbjct: 671 SSASGTVIKHSPANAEAAKLLASSVPGARLVEDASAGSVLRLELGAGFDGA--------- 721 Query: 692 IQVKLVRGTSSTPTQLPEDLSVTNAADATC 721 V S+ P Q+PE+L+ NA C Sbjct: 722 -----VHAPSTAPAQVPENLATVNAGTDVC 746 >tr|C7MRB8|C7MRB8_SACVD Tax_Id=471857 SubName: Full=Cell envelope-related function transcriptional attenuator common domain protein;[Saccharomonospora viridis] Length = 619 Score = 276 bits (706), Expect = 8e-72 Identities = 172/451 (38%), Positives = 237/451 (52%), Gaps = 39/451 (8%) Query: 133 AGVTAAHPDLDSCDTEIIPAVPAADEHADLPDTHRDSWR-----RRTRPQH---AGTDDF 184 A AA D+DS DTE++ + + + +D D+ D R T AGTD Sbjct: 150 AETDAAPDDVDSDDTELV-RLESEETESDETDSDGDGSNGANGLRTTEADDTGSAGTDSD 208 Query: 185 ------------DEPHRRHPNRKXXXXXXXXXXXXXXXXXXXXGGAWQWQSSKNDSLNKV 232 D R +R+ G W ++ +N++ Sbjct: 209 ESTSDQDGSETRDHAERTGRDRRAVLASKAAVLVVAVLVFLGTGIGWGAKTWFEGQVNEI 268 Query: 233 AALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPA 292 ALD S DI + +AQ GD NFLIVG D+R G ++ GST+ GARSDT+ML +IP Sbjct: 269 LALDEDSADIRNASAQIGDANFLIVGSDTREGAEAEDNVGSTESIQGARSDTVMLAHIPE 328 Query: 293 SRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFG 352 RERVV +SFPRDL IT +C+ WD TG YG T GP E KLN+AF G Sbjct: 329 DRERVVVISFPRDLEITRPECQRWDSATGAYGE-------TVGPAEA---VKLNTAFTIG 378 Query: 353 GPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGR 412 GP+CL KVIQ+ISG+ +N F+ +DF GF MVDA+GGV + P+ D ELG ++A G Sbjct: 379 GPRCLTKVIQQISGVRINHFVGIDFQGFKGMVDAVGGVTMHFEEPMRDAELGLIVAETGD 438 Query: 413 QIVDGHTALNYVRARQVTTEYN-GDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVN 471 ++ G AL++VRAR+V + DYGR+KRQQ D + KL N Sbjct: 439 VLLKGEQALSFVRARKVYGDPTFSDYGRMKRQQDFLASLLRKVLSGDVLLDMGKLTNFAQ 498 Query: 472 MFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFD 531 F ++ +NI ++ L QS++G++AG++TF+TIPT G A+E GNE + LF Sbjct: 499 AFARSTFGENIGVDQMLTLAQSMKGLDAGKVTFLTIPTVGEANERGNEVLLESEAAKLFQ 558 Query: 532 AIINDDPLPG-EKNPDNTPVP------GTPE 555 A+I++ PLPG E+ P P GTP+ Sbjct: 559 ALIDNTPLPGEEEEQQGAPTPEAGAETGTPQ 589 >tr|C6WPQ9|C6WPQ9_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator;[Actinosynnema mirum] Length = 1336 Score = 266 bits (681), Expect = 6e-69 Identities = 174/514 (33%), Positives = 253/514 (49%), Gaps = 57/514 (11%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGENSQMGAGSTD 275 G W + + ++ AL S + Q GDENFLIVG D+R G G G T Sbjct: 871 GIGWGAMLHFDSKITRIDALGQNSAAVHQAEKQLGDENFLIVGSDTRAGAKDTDGVGDTS 930 Query: 276 DADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGP-IWDEASGTY 334 + GARSD +M+ ++PA R+R+V VS PRDL +T C WD + TY + +A G Sbjct: 931 EVVGARSDVMMIAHVPADRKRMVVVSMPRDLQVTRPACNSWDSASDTYSDKVLPQAEGV- 989 Query: 335 GPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCS 394 K N +A GGP+C+ K + ++SGL +NRF++VDF GF MVDA+G V VC+ Sbjct: 990 ---------KANEVYATGGPQCVSKFMTELSGLDINRFVSVDFNGFKGMVDAVGTVGVCA 1040 Query: 395 TTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXX 454 T ++D ELG + G+ VDG AL++VRAR+V TE GDY RIKRQQ Sbjct: 1041 PTVMDDGELGMIFDKPGKYEVDGQKALDFVRARKVKTEEFGDYDRIKRQQQFLSALLRKA 1100 Query: 455 XXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIP------ 508 + S SKLN +N F + + NI ++ L QS+QG++AGR++FVT+P Sbjct: 1101 MSSELLLSPSKLNGFLNAFASSTAGQNIGVDSMLTLAQSLQGLDAGRVSFVTVPHRTDEG 1160 Query: 509 -TTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXXX 567 T D + E + D+ +ALF A+I+ PLPGE + GT E Sbjct: 1161 PTPSNDDNF--EVLQEDETKALFQAVIDGTPLPGEAPTEG----GTTEKKA--------- 1205 Query: 568 XXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTP 627 E +P V V+V N T +LE+ GF VT Sbjct: 1206 ----------------EKQPGTVGDPGSVRVQVFNQTSGGFAPKNTKTKLEEVGFKVTYI 1249 Query: 628 DDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSP 687 P T + ++ GNE AAAT+ ++ +A ++ +G VV +++G+++ Sbjct: 1250 GVAPQASTRTFIRYATGNENAAATLRAAVPDAELQVDESMGGVVALMMGSEW-------- 1301 Query: 688 SGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATC 721 G+ + + +G + DL V NAA C Sbjct: 1302 EGAVERPRAGQGGGVSADSGAGDLPVVNAAVDPC 1335 >tr|C8XA49|C8XA49_NAKMY Tax_Id=479431 SubName: Full=Cell envelope-related transcriptional attenuator;[Nakamurella multipartita] Length = 551 Score = 249 bits (635), Expect = 1e-63 Identities = 161/491 (32%), Positives = 242/491 (49%), Gaps = 43/491 (8%) Query: 248 QFGDENFLIVGMDSRFGE-NSQMGAGSTDDADG-ARSDTIMLVNIPASRERVVAVSFPRD 305 +F EN L++G D+R G N+Q G ADG A SDT+M+ +I + R V +S PRD Sbjct: 86 EFTPENILLLGSDTRAGAANAQAGGTDDSTADGVANSDTLMIAHISSDRH-VTVLSIPRD 144 Query: 306 LAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKIS 365 + C WD G G + D+ D+ + +NSA++ GGP+C V+ +Q ++ Sbjct: 145 TMVDAPTCRVWD---GATGQLSDQTYPVSSGDKWH----INSAYSVGGPQCTVRAVQDLT 197 Query: 366 GLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYVR 425 GL ++R + +DFAGF MVDALGG+ V P+ D ELGTV+ + G Q + G AL+ VR Sbjct: 198 GLRIDRVIGIDFAGFQSMVDALGGITVNVCRPIVDGELGTVVPDGGVQTIHGEQALSLVR 257 Query: 426 ARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKTK 485 AR+V + + D RI+RQQ T + +KL+ + F+ +++ DN+ Sbjct: 258 ARKVEGDTDSDLARIRRQQIVLSAILQQVTSAGTLLNPAKLDAFLQAFVQNTFTDNVTID 317 Query: 486 DLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKNP 545 DLV L QS+ ++ ++TF T+PT P D A+F+A+ ND PLPGE Sbjct: 318 DLVALAQSMGNLDPSKVTFYTLPTVPSRSNPDALDPDEDAANAVFEALRNDQPLPGESGS 377 Query: 546 DNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTG 605 + P TP + + T +P V + V N TG Sbjct: 378 TTSTAPSTPAVPEPSAGAVGG------------------LATGTTVDPATVNLTVVNVTG 419 Query: 606 QSGLAATAAGELEQHGFNVTTPDDYPGPLD---ATTVFFSPGNEEAAATVASSFSNAAIE 662 +SG+A A EL GF++T D P D A T+ + P N AA TVA++ A + Sbjct: 420 RSGVAGQAMDELNNVGFDITDDDLQARPDDVQSAVTIEYDPTNLNAALTVAAAVPGATVV 479 Query: 663 RVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTS------------STPTQLPED 710 V+GLG V+++LG D+ P + +++ + TS ST L Sbjct: 480 PVSGLGKSVRLLLGEDYDGSVSPVKAKASVTATMGSATSTPTASDDQDSAQSTAPSLTTP 539 Query: 711 LSVTNAADATC 721 L+ NA +A C Sbjct: 540 LTSINAGEALC 550 >tr|Q47LW3|Q47LW3_THEFY Tax_Id=269800 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Thermobifida fusca] Length = 478 Score = 183 bits (464), Expect = 9e-44 Identities = 137/468 (29%), Positives = 211/468 (45%), Gaps = 59/468 (12%) Query: 245 PNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPR 304 P G N +I+G D R G N++ G + +G R DT+++ +I + + + V+ PR Sbjct: 65 PTKVEGAINIMIIGSDVRSGANAEYGG----EIEGERPDTLLIAHISPNHDGAILVNLPR 120 Query: 305 DLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKI 364 D + CEP G EA LNSA +GG +C KV++++ Sbjct: 121 DSIVDMPACEPNGDRPGM------EAH----------RGMLNSAMNYGGIQCQWKVVEQL 164 Query: 365 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYV 424 +G+ ++ F++VDF GF +MVDA+GGVE+C P++D + L +AGRQ ++G AL Y+ Sbjct: 165 TGIHIDHFVSVDFTGFKEMVDAIGGVEMCIPHPIDDPKAHLKL-DAGRQTLNGEQALGYM 223 Query: 425 RARQVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKT 484 R+R + D RI RQQ + S S + ++ VD+ T Sbjct: 224 RSRYGQGD-GSDLSRIDRQQVFLGAMLRKVMSGEIMSSPSSIYAFLSSVTDSITVDDQFT 282 Query: 485 KD-LVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEK 543 D + D+ ++ V+ I FVT+P + D+ D LF AI ND + EK Sbjct: 283 VDKMTDIAIQMREVDMSNIRFVTVPNGAHPDDANRVAWTQPDADRLFQAIANDTEITDEK 342 Query: 544 NPDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNS 603 + D E D T +P +V+V+V N Sbjct: 343 SDDE--------------------------------EKDEEKEDVPTVDPAEVSVEVING 370 Query: 604 TGQSGLAATAAGELEQHGFNVTTPDDYPGPLDA-TTVFFSPGNEEAAATVASSFSNAAIE 662 T SGLA T EL+ GF V + G + TTVF+ PG E A TVA+ A +E Sbjct: 371 TTTSGLAGTVGEELQARGFVVAGTGNPQGSVPGRTTVFYGPGMEAHAHTVAAQVKKAVVE 430 Query: 663 RVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPED 710 LG VQ+V+ D+ + S S+ ++ ++ + PED Sbjct: 431 ESPYLGSTVQLVISMDWDGLKGQSSGDSS---NVLDSLNAKTAEAPED 475 >tr|Q50048|Q50048_MYCLE Tax_Id=1769 SubName: Full=U2266o;[Mycobacterium leprae] Length = 222 Score = 182 bits (462), Expect = 2e-43 Identities = 97/169 (57%), Positives = 115/169 (68%), Gaps = 2/169 (1%) Query: 392 VCSTTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXX 451 +C TP +DYELG VL R++V+ T LNYVRAR+VTT++ GDY RIKRQQ Sbjct: 1 MCRKTPTQDYELGAVLDYRERKVVNRATVLNYVRARKVTTDFTGDYRRIKRQQLSLSSLL 60 Query: 452 XXXXXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIPTTG 511 DT F+L+KLNN+VNMFI+ SYVDN+KTKDL LG S+QG+ G ITFVT+P TG Sbjct: 61 SSTILSDTLFNLNKLNNLVNMFISKSYVDNVKTKDLAQLGMSLQGMATGHITFVTVP-TG 119 Query: 512 YADEWGNEQPRMDDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNT 560 D GNE PR D+R LFDAIINDDPLP E N NT G +TT T Sbjct: 120 VTDGNGNEPPRTADMRVLFDAIINDDPLPLENN-QNTQSSGMTPTTTPT 167 >tr|D1AF98|D1AF98_THECD Tax_Id=471852 SubName: Full=Cell envelope-related transcriptional attenuator;[Thermomonospora curvata] Length = 549 Score = 174 bits (440), Expect = 5e-41 Identities = 140/477 (29%), Positives = 208/477 (43%), Gaps = 66/477 (13%) Query: 216 GGAWQWQSSKNDSLNKVAALDLGSRDILDPNAQFGDENFLIVGMDSRFGEN-SQMGAGST 274 GGAW +Q+ +L+KV LG D G L+ G+D R G Q A Sbjct: 93 GGAWGFQNYVTGALDKVRVGGLG-----DGGGPKGAMTILVAGVDRRDGLTPEQQKAARL 147 Query: 275 DDADGARSDTIMLVNIPASRERVVAVSFPRDLAITPMKCEPWDPETGTYGPIWDEASGTY 334 A+G RSDT+MLV+I +R+ VS PRD + P G+ GP Y Sbjct: 148 GRAEGERSDTMMLVHISRDHDRISVVSLPRDSLVII----PAHRSNGSEGPKGTPIPARY 203 Query: 335 GPDEVYTETKLNSAFAFGGPKCLVKVIQKISGLSVNRFMAVDFAGFSKMVDALGGVEVCS 394 G KL A+ +GGP V +++ +G+ ++ ++ V+F GF MVDA+GGV+VC Sbjct: 204 G--------KLTWAYQYGGPDLTVATVKRATGVPIDHYIEVNFYGFVNMVDAIGGVDVCV 255 Query: 395 TTPLEDYELGTVLANAGRQIVDGHTALNYVRARQVTTEYNGDYGRIKRQQXXXXXXXXXX 454 + D + G L AG V+G AL + RAR + D GRI+RQQ Sbjct: 256 EKAVYDKKSGLKLP-AGTTHVNGLQALAFARARY-SIGNGSDLGRIERQQQFMASLLKQA 313 Query: 455 XXKDTFFSLSKLNNVVNMFIADSYVDNIKTKDLVDLGQSVQGVNAGRITFVTIP--TTGY 512 T K +N + VD K+L L ++ ++ +TFV IP + Y Sbjct: 314 LNTKTLSDPVKSTRFLNAALKTLRVDEKLAKNLPALADQMKDLSTDNVTFVKIPLKSENY 373 Query: 513 ADEWGNEQPRM------DDVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTXXXXXX 566 P+ + +F I D P +P P +P T + Sbjct: 374 MTPINGSAPQSTVLWDREKAEEVFAKIRRDQPFDPP-----SPKPASPSPTVDP------ 422 Query: 567 XXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTT 626 D T +P+ + V V N G GLAA AAG+L + GF + Sbjct: 423 --------------------DAPTVQPRDINVVVRNGVGTPGLAARAAGDLRRVGFGTSV 462 Query: 627 PDDYPG----PLDATTVFFSPGNEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDF 679 P PG L T + + N +AA T+A++ A +++V LGD +QV++G+D+ Sbjct: 463 P---PGVARTGLRTTQIHYGSANVDAAKTLAAAIPGARLKKVPSLGDTIQVIVGSDW 516 >tr|A0LRX6|A0LRX6_ACIC1 Tax_Id=351607 SubName: Full=Cell envelope-related transcriptional attenuator;[Acidothermus cellulolyticus] Length = 491 Score = 167 bits (424), Expect = 4e-39 Identities = 145/482 (30%), Positives = 213/482 (44%), Gaps = 74/482 (15%) Query: 250 GDENFLIVGMDSRFGENSQMGAGSTDDAD--GARSDTIMLVNIPASRERVVAVSFPRDLA 307 G EN L+VG D+R G Q G RSDT++L ++ R VS PRD Sbjct: 72 GAENVLLVGSDTRTGAGDQFAQAPKGQTQVLGQRSDTVILAHLAKGHGRATLVSLPRDSW 131 Query: 308 ITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKISGL 367 +T P + +A+G P + KLN+AFA GG LVK +Q+++GL Sbjct: 132 VTI--------------PAYTDANGVLHPAH---QDKLNAAFALGGAALLVKTVQELTGL 174 Query: 368 SVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYVRAR 427 ++ ++ +DFAGF +MVDALGGV+VC + P D G L +AG ++G AL +VR R Sbjct: 175 HIDHYVEIDFAGFQRMVDALGGVDVCLSRPAHDVNTGINL-SAGWHHLNGAQALAFVRQR 233 Query: 428 QVTTEYNGDYGRIKRQQXXXXXXXXXXXXKDTFFSLSKLNNVVNMFIADSYVD-NIKTKD 486 GD RIKRQQ T + KLN ++ F VD + T D Sbjct: 234 YGLP--LGDLDRIKRQQQFLAAMMRKVESAGTLTNPLKLNAFLDAFTKSVTVDAGMSTAD 291 Query: 487 LVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRA--LFDAIINDDPLPGEKN 544 + L S++G++ G + T+P G+ G +D +A LF A+ D + + Sbjct: 292 MEKLAVSLRGLSTGNVVLTTMPIAGFGTRNGESVDIVDTAKAQQLFAALAADQSV---LS 348 Query: 545 PDNTPVPGTPESTTNTXXXXXXXXXXXXXXXXXXXXXXXEMVDTVTTEPQQVTVKVSNST 604 P P T QV V+V N+ Sbjct: 349 PSAQP---------------------------------------STLPRSQVHVRVFNAA 369 Query: 605 GQSGLAATAAGELEQHGFNVT-TPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIER 663 G +GLAA A+ EL Q GF+V TP + T + + P AA T+A+ A + Sbjct: 370 GINGLAARASAELAQAGFDVIGTPANRGSGATTTVIEYPPAEAAAAHTLAAVIPGAVLRP 429 Query: 664 VAGLGDVVQVVLGTDFMAV---NPPSPSGSAIQVKLVRGTS-STPTQLPEDLSVTNAADA 719 L + ++LG+D+ + + PS +G+ + G + ST L S T AA A Sbjct: 430 NDQLSGEIDLLLGSDYHGLATSSSPSTTGTPNRGSGGSGAAGSTGGGLTG--SATTAATA 487 Query: 720 TC 721 +C Sbjct: 488 SC 489 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.313 0.132 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 5,725,565,879 Number of extensions: 238269457 Number of successful extensions: 420010 Number of sequences better than 10.0: 2921 Number of HSP's gapped: 418932 Number of HSP's successfully gapped: 3036 Length of query: 722 Length of database: 4,236,830,644 Length adjustment: 146 Effective length of query: 576 Effective length of database: 2,410,682,500 Effective search space: 1388553120000 Effective search space used: 1388553120000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 85 (37.4 bits)