BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_6079 (466 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R563|A0R563_MYCS2 Tax_Id=246196 (radA)RecName: Full=DNA rep... 885 0.0 tr|A1TG13|A1TG13_MYCVP Tax_Id=350058 RecName: Full=DNA repair pr... 696 0.0 tr|A4T5L4|A4T5L4_MYCGI Tax_Id=350054 RecName: Full=DNA repair pr... 696 0.0 tr|A3Q6W5|A3Q6W5_MYCSJ Tax_Id=164757 RecName: Full=DNA repair pr... 674 0.0 tr|Q1B2N8|Q1B2N8_MYCSS Tax_Id=164756 RecName: Full=DNA repair pr... 672 0.0 tr|A1UMG0|A1UMG0_MYCSK Tax_Id=189918 RecName: Full=DNA repair pr... 672 0.0 tr|B1MGX8|B1MGX8_MYCA9 Tax_Id=561007 RecName: Full=DNA repair pr... 595 e-168 tr|D5P8L4|D5P8L4_9MYCO Tax_Id=525368 (radA)SubName: Full=DNA rep... 595 e-168 sp|P65953|RADA_MYCTU Tax_Id=1773 (radA)RecName: Full=DNA repair ... 595 e-168 sp|P65954|RADA_MYCBO Tax_Id=1765 (radA)RecName: Full=DNA repair ... 595 e-168 tr|C6DMN7|C6DMN7_MYCTK Tax_Id=478434 RecName: Full=DNA repair pr... 595 e-168 tr|C1AI44|C1AI44_MYCBT Tax_Id=561275 (radA)RecName: Full=DNA rep... 595 e-168 tr|A5WTF4|A5WTF4_MYCTF Tax_Id=336982 RecName: Full=DNA repair pr... 595 e-168 tr|A5U8R0|A5U8R0_MYCTA Tax_Id=419947 (radA)RecName: Full=DNA rep... 595 e-168 tr|A1KPS1|A1KPS1_MYCBP Tax_Id=410289 (radA)RecName: Full=DNA rep... 595 e-168 tr|D6G4S5|D6G4S5_MYCTU Tax_Id=478435 SubName: Full=DNA repair pr... 595 e-168 tr|D6FT68|D6FT68_MYCTU Tax_Id=611304 SubName: Full=DNA repair pr... 595 e-168 tr|D6FHJ5|D6FHJ5_MYCTU Tax_Id=611303 SubName: Full=DNA repair pr... 595 e-168 tr|D6EYT3|D6EYT3_MYCTU Tax_Id=611302 SubName: Full=DNA repair pr... 595 e-168 tr|D5ZMC9|D5ZMC9_MYCTU Tax_Id=537210 SubName: Full=DNA repair pr... 595 e-168 tr|D5ZAF9|D5ZAF9_MYCTU Tax_Id=537209 SubName: Full=DNA repair pr... 595 e-168 tr|D5YXK6|D5YXK6_MYCTU Tax_Id=515616 SubName: Full=DNA repair pr... 595 e-168 tr|D5YL35|D5YL35_MYCTU Tax_Id=520140 SubName: Full=DNA repair pr... 595 e-168 tr|D5Y9I5|D5Y9I5_MYCTU Tax_Id=520141 SubName: Full=DNA repair pr... 595 e-168 tr|D5XZS6|D5XZS6_MYCTU Tax_Id=515617 SubName: Full=DNA repair pr... 595 e-168 tr|A4KM70|A4KM70_MYCTU Tax_Id=395095 RecName: Full=DNA repair pr... 595 e-168 tr|A2VPZ3|A2VPZ3_MYCTU Tax_Id=348776 RecName: Full=DNA repair pr... 595 e-168 tr|Q743W8|Q743W8_MYCPA Tax_Id=1770 (radA)RecName: Full=DNA repai... 592 e-167 tr|B2HJ26|B2HJ26_MYCMM Tax_Id=216594 (radA)RecName: Full=DNA rep... 590 e-166 tr|A0QAB0|A0QAB0_MYCA1 Tax_Id=243243 (radA)RecName: Full=DNA rep... 568 e-160 tr|C1BAB9|C1BAB9_RHOOB Tax_Id=632772 (radA)RecName: Full=DNA rep... 537 e-150 tr|D5PZ33|D5PZ33_COREQ Tax_Id=525370 (radA)SubName: Full=DNA rep... 530 e-148 tr|Q5Z2R7|Q5Z2R7_NOCFA Tax_Id=37329 (sms)RecName: Full=DNA repai... 527 e-147 tr|C0ZPR4|C0ZPR4_RHOE4 Tax_Id=234621 (radA)RecName: Full=DNA rep... 516 e-144 tr|C3JUM6|C3JUM6_RHOER Tax_Id=596309 (radA)RecName: Full=DNA rep... 516 e-144 tr|C7MQ45|C7MQ45_SACVD Tax_Id=471857 RecName: Full=DNA repair pr... 504 e-141 tr|D5USV0|D5USV0_TSUPA Tax_Id=521096 SubName: Full=DNA repair pr... 501 e-139 tr|Q0S893|Q0S893_RHOSR Tax_Id=101510 (radA)RecName: Full=DNA rep... 492 e-137 tr|D0L455|D0L455_GORB4 Tax_Id=526226 RecName: Full=DNA repair pr... 492 e-137 tr|C6WGL9|C6WGL9_ACTMD Tax_Id=446462 RecName: Full=DNA repair pr... 491 e-137 tr|D3CD59|D3CD59_9ACTO Tax_Id=648999 RecName: Full=DNA repair pr... 480 e-133 tr|D1S8F7|D1S8F7_9ACTO Tax_Id=644283 RecName: Full=DNA repair pr... 479 e-133 tr|A4XCP0|A4XCP0_SALTO Tax_Id=369723 RecName: Full=DNA repair pr... 476 e-132 tr|C3PJC3|C3PJC3_CORA7 Tax_Id=548476 (radA)RecName: Full=DNA rep... 475 e-132 tr|A8M7T6|A8M7T6_SALAI Tax_Id=391037 RecName: Full=DNA repair pr... 474 e-131 >tr|A0R563|A0R563_MYCS2 Tax_Id=246196 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium smegmatis] Length = 466 Score = 885 bits (2287), Expect = 0.0 Identities = 453/466 (97%), Positives = 453/466 (97%) Query: 1 MAGSKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSP 60 MAGSKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSP Sbjct: 1 MAGSKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSP 60 Query: 61 AVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHS 120 AVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHS Sbjct: 61 AVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHS 120 Query: 121 GKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQT 180 GKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQT Sbjct: 121 GKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQT 180 Query: 181 MSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLV 240 MSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLV Sbjct: 181 MSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLV 240 Query: 241 DVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPG 300 DVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPG Sbjct: 241 DVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPG 300 Query: 301 TAVTVTLDGKRPMIGEVQALVSPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDL 360 TAVTVTLDGKRPMIGEVQALVSPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDL Sbjct: 301 TAVTVTLDGKRPMIGEVQALVSPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDL 360 Query: 361 YLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSE 420 YLSTVGGMRLTDP YFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSE Sbjct: 361 YLSTVGGMRLTDPSADLAVALAIASAYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSE 420 Query: 421 AARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGAQ 466 AARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGAQ Sbjct: 421 AARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGAQ 466 >tr|A1TG13|A1TG13_MYCVP Tax_Id=350058 RecName: Full=DNA repair protein radA;[Mycobacterium vanbaalenii] Length = 462 Score = 696 bits (1796), Expect = 0.0 Identities = 360/463 (77%), Positives = 397/463 (85%), Gaps = 8/463 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVP 63 SK RSQ+RCSEC HV PKWVGRC +CGTWGTV+EVA+ A A RR+VAP SPAVP Sbjct: 6 SKTRSQFRCSECHHVTPKWVGRCPDCGTWGTVNEVALTAVGGS---ATRRAVAPASPAVP 62 Query: 64 ITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKR 123 I+SIDPG TRH+ TG+SELDRVLGGGLV GSVTLLAGDPGVGKSTLLLEVA+RWA +G+R Sbjct: 63 ISSIDPGSTRHFHTGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWASTGRR 122 Query: 124 ALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMST 183 ALYLSGEESAGQIRLRAERTGC+HD+VYLAAESDLQ ALGHID V+P+LVVVDSVQTMST Sbjct: 123 ALYLSGEESAGQIRLRAERTGCSHDEVYLAAESDLQTALGHIDAVQPTLVVVDSVQTMST 182 Query: 184 TEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVV 243 TEADGVTGGVTQVRAVTT+LT AK VAM+LVGHVTKDGAIAGPRSLEHLVDVV Sbjct: 183 TEADGVTGGVTQVRAVTTALTMTAKTT----GVAMLLVGHVTKDGAIAGPRSLEHLVDVV 238 Query: 244 LHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAV 303 LHFEGDRAS+LRMVRG+KNRFGAADEVGCF LHDNGIECVSDPSGLFLDQRP V GTAV Sbjct: 239 LHFEGDRASALRMVRGIKNRFGAADEVGCFLLHDNGIECVSDPSGLFLDQRPKPVSGTAV 298 Query: 304 TVTLDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYL 362 TVTLDGKRPMIGEVQAL+ SP +G PRRAVSGIDS+RAAMI AVL+ R ++P+ ND+YL Sbjct: 299 TVTLDGKRPMIGEVQALIGSPASGSPRRAVSGIDSSRAAMITAVLEKRAKLPVGMNDIYL 358 Query: 363 STVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAA 422 STVGGMRLTD + D+A+P AIAIGEVGLAGDLRRVTGMDRRL+EAA Sbjct: 359 STVGGMRLTDSSSDLAVALSIASAFTDLALPTTAIAIGEVGLAGDLRRVTGMDRRLAEAA 418 Query: 423 RLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGA 465 RLGFT AVVP GVTSAPAGL+V+ ADNI +A+Q +R I+ GA Sbjct: 419 RLGFTYAVVPSGVTSAPAGLQVLPADNITSALQVLRRISQNGA 461 >tr|A4T5L4|A4T5L4_MYCGI Tax_Id=350054 RecName: Full=DNA repair protein radA;[Mycobacterium gilvum] Length = 467 Score = 696 bits (1795), Expect = 0.0 Identities = 359/459 (78%), Positives = 393/459 (85%), Gaps = 9/459 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVP 63 SK+RSQYRCSEC H KWVGRC++CGTWGTVDEVA+ A + GA RR+VAP SPAVP Sbjct: 6 SKVRSQYRCSECHHTTAKWVGRCSDCGTWGTVDEVALTA----VGGATRRAVAPASPAVP 61 Query: 64 ITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKR 123 I+SIDPG TRH+ TG+SELDRVLGGGLV GSVTLLAGDPGVGKSTLLLEVA+RWA +G+R Sbjct: 62 ISSIDPGTTRHFHTGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWASTGRR 121 Query: 124 ALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMST 183 ALYLSGEESAGQIRLRAERTGC+HD+VYLAAESDLQ ALGHID V+PSLVVVDSVQTMST Sbjct: 122 ALYLSGEESAGQIRLRAERTGCSHDEVYLAAESDLQTALGHIDAVRPSLVVVDSVQTMST 181 Query: 184 TEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVV 243 TEADGVTGGVTQVRAVTT+LT AK VAM+LVGHVTKDGAIAGPRSLEHLVDVV Sbjct: 182 TEADGVTGGVTQVRAVTTALTMTAKTT----GVAMLLVGHVTKDGAIAGPRSLEHLVDVV 237 Query: 244 LHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAV 303 LHFEGDRAS+LRMVRGVKNRFGAADEVGCF LHDNGIECVSDPSGLFLDQRP AV GTAV Sbjct: 238 LHFEGDRASALRMVRGVKNRFGAADEVGCFLLHDNGIECVSDPSGLFLDQRPKAVSGTAV 297 Query: 304 TVTLDGKRPMIGEVQALVSPPA-GPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYL 362 TVTLDGKRPMIGEVQAL+ A G PRRAVSGIDS+RAAMI AVL+ R R+P+ +ND+YL Sbjct: 298 TVTLDGKRPMIGEVQALIGASASGSPRRAVSGIDSSRAAMITAVLEKRARLPVGTNDIYL 357 Query: 363 STVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAA 422 STVGGMRLTD Y D+A+P AIAIGEVGLAGDLRRVTGMD+RL+EAA Sbjct: 358 STVGGMRLTDSSSDLAVALAIASAYTDLALPTTAIAIGEVGLAGDLRRVTGMDKRLAEAA 417 Query: 423 RLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 RLGFT AVVP G A AGLKV+ ADNI +A+Q +R I+ Sbjct: 418 RLGFTVAVVPSGAVGAHAGLKVLQADNIGSALQVLRRIS 456 >tr|A3Q6W5|A3Q6W5_MYCSJ Tax_Id=164757 RecName: Full=DNA repair protein radA;[Mycobacterium sp.] Length = 466 Score = 674 bits (1738), Expect = 0.0 Identities = 350/468 (74%), Positives = 389/468 (83%), Gaps = 8/468 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGA-ARRSVAPTSPAV 62 +K RSQYRCSEC+H+ KWVGRC +CGTWGTV+EVAVLA + GA AR +VAP SPAV Sbjct: 2 AKARSQYRCSECRHITAKWVGRCPDCGTWGTVEEVAVLAA---VAGAPARHAVAPASPAV 58 Query: 63 PITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGK 122 PI+SIDPG TRH TG+SELDRVLGGGLV GSVTLLAGDPGVGKSTLLLEVA+RWA SG+ Sbjct: 59 PISSIDPGRTRHDETGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAVSGR 118 Query: 123 RALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMS 182 RALYL+GEESAGQ+RLRAERTGCTHD++YLAAESDL ALGHID V+PSLVVVDSVQTMS Sbjct: 119 RALYLTGEESAGQVRLRAERTGCTHDELYLAAESDLPTALGHIDAVQPSLVVVDSVQTMS 178 Query: 183 TTEADGVTGGVTQVRAVTTSLTAYAKAAV---GDPAVAMILVGHVTKDGAIAGPRSLEHL 239 T+E DGVTGGVTQVRAVTT+LT YAK A G +AM+LVGHVTKDGAIAGPRSLEHL Sbjct: 179 TSENDGVTGGVTQVRAVTTALTQYAKGAAGPGGPGGIAMVLVGHVTKDGAIAGPRSLEHL 238 Query: 240 VDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVP 299 VDVVLHFEGDR S+LRMVRGVKNRFGAADEVGCFQLHDNGIECV+DPSGLF DQR V Sbjct: 239 VDVVLHFEGDRNSTLRMVRGVKNRFGAADEVGCFQLHDNGIECVADPSGLFRDQRDTPVA 298 Query: 300 GTAVTVTLDGKRPMIGEVQALVSPPAGP-PRRAVSGIDSARAAMIGAVLQTRCRMPINSN 358 GTAVTVTLDGKRP+IGEVQALV PP GP PRRAVSGID+ARAAMI AVL R+ + Sbjct: 299 GTAVTVTLDGKRPLIGEVQALVGPPTGPHPRRAVSGIDAARAAMIAAVLDKHARLQVGPC 358 Query: 359 DLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRL 418 D+YLSTVGGMRLTDP + AMP ++ IGE+GLAGDLRRVTGMDRRL Sbjct: 359 DIYLSTVGGMRLTDPSSDLAVAIAMASARKERAMPANSVVIGELGLAGDLRRVTGMDRRL 418 Query: 419 SEAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGAQ 466 +EAARLGFTTAVVPPG T P GL+V+ A+NI AA++ + IA G + Sbjct: 419 AEAARLGFTTAVVPPGTTGVPPGLRVLPAENISAALRVLDRIADNGGR 466 >tr|Q1B2N8|Q1B2N8_MYCSS Tax_Id=164756 RecName: Full=DNA repair protein radA;[Mycobacterium sp.] Length = 466 Score = 672 bits (1733), Expect = 0.0 Identities = 349/468 (74%), Positives = 388/468 (82%), Gaps = 8/468 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGA-ARRSVAPTSPAV 62 +K RSQYRCSEC+H+ KWVGRC +CGTWGTV+EVAVLA + GA AR +VAP SPAV Sbjct: 2 AKARSQYRCSECRHITAKWVGRCPDCGTWGTVEEVAVLAA---VAGAPARHAVAPASPAV 58 Query: 63 PITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGK 122 PI+SIDPG TRH TG+SELDRVLGGGLV GSVTLLAGDPGVGKSTLLLEVA+RWA SG+ Sbjct: 59 PISSIDPGRTRHDETGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAVSGR 118 Query: 123 RALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMS 182 RALYL+GEESAGQ+RLRAERTGCTHD++YLAAESDL ALGHID V+PSLVVVDSVQTMS Sbjct: 119 RALYLTGEESAGQVRLRAERTGCTHDELYLAAESDLPTALGHIDAVQPSLVVVDSVQTMS 178 Query: 183 TTEADGVTGGVTQVRAVTTSLTAYAKAAV---GDPAVAMILVGHVTKDGAIAGPRSLEHL 239 T+E DGVTGGVTQVRAVTT+LT YAK A G +AM+LVGHVTKDGAIAGPRSLEHL Sbjct: 179 TSENDGVTGGVTQVRAVTTALTQYAKGAAGPGGPGGIAMVLVGHVTKDGAIAGPRSLEHL 238 Query: 240 VDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVP 299 VDVVLHFEGDR S+LRMVRGVKNRFGAADEVGCFQLHDNGIECV+DPSGLF DQR V Sbjct: 239 VDVVLHFEGDRNSTLRMVRGVKNRFGAADEVGCFQLHDNGIECVADPSGLFRDQRDTPVA 298 Query: 300 GTAVTVTLDGKRPMIGEVQALVSPPAGP-PRRAVSGIDSARAAMIGAVLQTRCRMPINSN 358 GTAVTV LDGKRP+IGEVQALV PP GP PRRAVSGID+ARAAMI AVL R+ + Sbjct: 299 GTAVTVALDGKRPLIGEVQALVGPPTGPHPRRAVSGIDAARAAMIAAVLDKHARLQVGPC 358 Query: 359 DLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRL 418 D+YLSTVGGMRLTDP + AMP ++ IGE+GLAGDLRRVTGMDRRL Sbjct: 359 DIYLSTVGGMRLTDPSSDLAVAIAMASARKERAMPANSVVIGELGLAGDLRRVTGMDRRL 418 Query: 419 SEAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGAQ 466 +EAARLGFTTAVVPPG T P GL+V+ A+NI AA++ + IA G + Sbjct: 419 AEAARLGFTTAVVPPGTTGVPPGLRVLPAENISAALRVLDRIADNGGR 466 >tr|A1UMG0|A1UMG0_MYCSK Tax_Id=189918 RecName: Full=DNA repair protein radA;[Mycobacterium sp.] Length = 466 Score = 672 bits (1733), Expect = 0.0 Identities = 349/468 (74%), Positives = 388/468 (82%), Gaps = 8/468 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGA-ARRSVAPTSPAV 62 +K RSQYRCSEC+H+ KWVGRC +CGTWGTV+EVAVLA + GA AR +VAP SPAV Sbjct: 2 AKARSQYRCSECRHITAKWVGRCPDCGTWGTVEEVAVLAA---VAGAPARHAVAPASPAV 58 Query: 63 PITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGK 122 PI+SIDPG TRH TG+SELDRVLGGGLV GSVTLLAGDPGVGKSTLLLEVA+RWA SG+ Sbjct: 59 PISSIDPGRTRHDETGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAVSGR 118 Query: 123 RALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMS 182 RALYL+GEESAGQ+RLRAERTGCTHD++YLAAESDL ALGHID V+PSLVVVDSVQTMS Sbjct: 119 RALYLTGEESAGQVRLRAERTGCTHDELYLAAESDLPTALGHIDAVQPSLVVVDSVQTMS 178 Query: 183 TTEADGVTGGVTQVRAVTTSLTAYAKAAV---GDPAVAMILVGHVTKDGAIAGPRSLEHL 239 T+E DGVTGGVTQVRAVTT+LT YAK A G +AM+LVGHVTKDGAIAGPRSLEHL Sbjct: 179 TSENDGVTGGVTQVRAVTTALTQYAKGAAGPGGPGGIAMVLVGHVTKDGAIAGPRSLEHL 238 Query: 240 VDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVP 299 VDVVLHFEGDR S+LRMVRGVKNRFGAADEVGCFQLHDNGIECV+DPSGLF DQR V Sbjct: 239 VDVVLHFEGDRNSTLRMVRGVKNRFGAADEVGCFQLHDNGIECVADPSGLFRDQRDTPVA 298 Query: 300 GTAVTVTLDGKRPMIGEVQALVSPPAGP-PRRAVSGIDSARAAMIGAVLQTRCRMPINSN 358 GTAVTV LDGKRP+IGEVQALV PP GP PRRAVSGID+ARAAMI AVL R+ + Sbjct: 299 GTAVTVALDGKRPLIGEVQALVGPPTGPHPRRAVSGIDAARAAMIAAVLDKHARLQVGPC 358 Query: 359 DLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRL 418 D+YLSTVGGMRLTDP + AMP ++ IGE+GLAGDLRRVTGMDRRL Sbjct: 359 DIYLSTVGGMRLTDPSSDLAVAIAMASARKERAMPANSVVIGELGLAGDLRRVTGMDRRL 418 Query: 419 SEAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIAIAGAQ 466 +EAARLGFTTAVVPPG T P GL+V+ A+NI AA++ + IA G + Sbjct: 419 AEAARLGFTTAVVPPGTTGVPPGLRVLPAENISAALRVLDRIADNGGR 466 >tr|B1MGX8|B1MGX8_MYCA9 Tax_Id=561007 RecName: Full=DNA repair protein radA;[Mycobacterium abscessus] Length = 473 Score = 595 bits (1534), Expect = e-168 Identities = 303/458 (66%), Positives = 361/458 (78%), Gaps = 8/458 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVP 63 +K R+QYRCSECQH KWVGRC +CGTWG+V E AVL+ L A R+VAP S AVP Sbjct: 2 AKPRAQYRCSECQHTTAKWVGRCPDCGTWGSVSETAVLSSIGGLG--AVRAVAPASAAVP 59 Query: 64 ITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKR 123 ITSI TRH PTGVSELDRVLGGGL+ GSV LLAG+PGVGKSTLLL+V ++WA SG R Sbjct: 60 ITSIATDTTRHQPTGVSELDRVLGGGLIPGSVNLLAGEPGVGKSTLLLKVVHQWAASGGR 119 Query: 124 ALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMST 183 ALY+SGEESA Q+RLRAERTGC HD+VYLA+ESDL LGHI+ VKP+L ++DSVQTMST Sbjct: 120 ALYISGEESAAQVRLRAERTGCVHDEVYLASESDLHSVLGHIEAVKPTLAIIDSVQTMST 179 Query: 184 TEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVV 243 T+ADGVTGGVTQVRAVTT+LT AK++ VAM+LVGHVTKDGAIAGPRSLEHLVDVV Sbjct: 180 TDADGVTGGVTQVRAVTTALTMAAKSS----GVAMVLVGHVTKDGAIAGPRSLEHLVDVV 235 Query: 244 LHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAV 303 LHFEGD+ S+LRMVRG+KNRFGAADEVGCFQL D GIECVSDPSGLFL+ R A GTAV Sbjct: 236 LHFEGDKHSALRMVRGIKNRFGAADEVGCFQLRDKGIECVSDPSGLFLEHREKAAAGTAV 295 Query: 304 TVTLDGKRPMIGEVQALVSPPAGP-PRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYL 362 TVTLDGKRP++GEVQ+LV+ P PRRAVSG+D AR+AM+ AVL+ R+P+ +ND+Y+ Sbjct: 296 TVTLDGKRPLLGEVQSLVTTSTNPSPRRAVSGLDHARSAMVTAVLERHGRLPLGNNDIYM 355 Query: 363 STVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAA 422 +TVGGMR+TDP Y DIA+P + IGEVGLAGD+RR + +R+SEAA Sbjct: 356 ATVGGMRMTDPSADLAILMAVASAYTDIALPANMVFIGEVGLAGDIRRTAAVGKRISEAA 415 Query: 423 RLGFTTAVVPP-GVTSAPAGLKVVAADNIRAAVQTMRE 459 RLG+T AV+PP G PAG+ ++ + A++ + E Sbjct: 416 RLGYTHAVIPPEGDDLHPAGMHLLRCPTVGRALEVLSE 453 >tr|D5P8L4|D5P8L4_9MYCO Tax_Id=525368 (radA)SubName: Full=DNA repair protein RadA;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 491 Score = 595 bits (1534), Expect = e-168 Identities = 314/463 (67%), Positives = 357/463 (77%), Gaps = 12/463 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSECQHV KWVGRC CGTWGTVDEV VLA AA + +PAVPITS Sbjct: 15 RSQYRCSECQHVTAKWVGRCLECGTWGTVDEVPVLAAVGGRRAAAASASVSAAPAVPITS 74 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 ++P +RH TG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLL+VA+RWA SG+RALY Sbjct: 75 VEPNASRHRSTGIGELDRVLGGGVVPGSVTLLAGDPGVGKSTLLLKVAHRWALSGRRALY 134 Query: 127 LSGEESAGQIRLRAERTGC---THDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMST 183 +SGEESAGQIRLRA+R GC +VYLAAESDL L HI V+P+LV+VDSVQTMST Sbjct: 135 ISGEESAGQIRLRADRIGCGGKDAQEVYLAAESDLHTVLAHIAAVRPALVIVDSVQTMST 194 Query: 184 TEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVV 243 TE+DGV GGVTQVRAVT +LTA AKA +A+ILVGHVTKDGAIAGPRSLEHLVDVV Sbjct: 195 TESDGVAGGVTQVRAVTAALTAAAKA----NGIALILVGHVTKDGAIAGPRSLEHLVDVV 250 Query: 244 LHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAV 303 LHFEGDR SLRMVRG+KNRFGAADEVGCF LHD+GIE VSDPS LFLDQRP V GTA+ Sbjct: 251 LHFEGDRNGSLRMVRGIKNRFGAADEVGCFLLHDSGIEDVSDPSNLFLDQRPAPVAGTAI 310 Query: 304 TVTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYL 362 TVTLDGKRP+IGEVQAL++ P G PRRAVSGID +RAAMIGAVL+ R+ I ND+YL Sbjct: 311 TVTLDGKRPLIGEVQALLATPGGGSPRRAVSGIDHSRAAMIGAVLEKHGRLAIGVNDIYL 370 Query: 363 STVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAA 422 STVGGMRLTDP Y + +P A+ IGEVGLAGDLRRV+GM+RRL EAA Sbjct: 371 STVGGMRLTDPSSDLAVAMALASAYSGLPLPTTAVMIGEVGLAGDLRRVSGMERRLGEAA 430 Query: 423 RLGFTTAVVPPGVTS----APAGLKVVAADNIRAAVQTMREIA 461 R GF+ A++P G P G++ + A I A+Q M+ IA Sbjct: 431 RQGFSIALIPDGDDPRREIVPDGMRALRAPTIVTALQHMKAIA 473 >sp|P65953|RADA_MYCTU Tax_Id=1773 (radA)RecName: Full=DNA repair protein radA homolog; AltName: Full=DNA repair protein sms homolog;[Mycobacterium tuberculosis] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >sp|P65954|RADA_MYCBO Tax_Id=1765 (radA)RecName: Full=DNA repair protein radA homolog; AltName: Full=DNA repair protein sms homolog;[Mycobacterium bovis] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|C6DMN7|C6DMN7_MYCTK Tax_Id=478434 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|C1AI44|C1AI44_MYCBT Tax_Id=561275 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium bovis] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|A5WTF4|A5WTF4_MYCTF Tax_Id=336982 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|A5U8R0|A5U8R0_MYCTA Tax_Id=419947 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|A1KPS1|A1KPS1_MYCBP Tax_Id=410289 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium bovis] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D6G4S5|D6G4S5_MYCTU Tax_Id=478435 SubName: Full=DNA repair protein radA;[Mycobacterium tuberculosis KZN 605] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D6FT68|D6FT68_MYCTU Tax_Id=611304 SubName: Full=DNA repair protein radA;[Mycobacterium tuberculosis K85] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D6FHJ5|D6FHJ5_MYCTU Tax_Id=611303 SubName: Full=DNA repair protein RadA;[Mycobacterium tuberculosis CPHL_A] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D6EYT3|D6EYT3_MYCTU Tax_Id=611302 SubName: Full=DNA repair protein RadA;[Mycobacterium tuberculosis T46] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D5ZMC9|D5ZMC9_MYCTU Tax_Id=537210 SubName: Full=DNA repair protein radA;[Mycobacterium tuberculosis T17] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D5ZAF9|D5ZAF9_MYCTU Tax_Id=537209 SubName: Full=DNA repair protein radA;[Mycobacterium tuberculosis GM 1503] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D5YXK6|D5YXK6_MYCTU Tax_Id=515616 SubName: Full=DNA repair protein radA;[Mycobacterium tuberculosis 02_1987] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D5YL35|D5YL35_MYCTU Tax_Id=520140 SubName: Full=DNA repair protein radA;[Mycobacterium tuberculosis EAS054] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D5Y9I5|D5Y9I5_MYCTU Tax_Id=520141 SubName: Full=DNA repair protein rada;[Mycobacterium tuberculosis T85] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|D5XZS6|D5XZS6_MYCTU Tax_Id=515617 SubName: Full=DNA repair protein radA;[Mycobacterium tuberculosis T92] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|A4KM70|A4KM70_MYCTU Tax_Id=395095 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis str. Haarlem] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|A2VPZ3|A2VPZ3_MYCTU Tax_Id=348776 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis C] Length = 480 Score = 595 bits (1533), Expect = e-168 Identities = 313/458 (68%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV+ KWVGRC CG WGTVDEVAVL+ + G RRSVAP S AVPI++ Sbjct: 5 RSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSA---VGGTRRRSVAPASGAVPISA 61 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D TR PTG+ ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 62 VDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHD--QVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTT 184 +SGEESAGQIRLRA+R GC + ++YLAA+SD+ L I+ V+P+LV+VDSVQTMST+ Sbjct: 122 VSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTS 181 Query: 185 EADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVL 244 EADGVTGGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVL Sbjct: 182 EADGVTGGVTQVRAVTAALTAAAKAN----EVALILVGHVTKDGAIAGPRSLEHLVDVVL 237 Query: 245 HFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVT 304 HFEGDR +LRMVRGVKNRFGAADEVGCF LHDNGI+ + DPS LFLDQRP V GTA+T Sbjct: 238 HFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGTAIT 297 Query: 305 VTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLS 363 VTLDGKRP++GEVQAL++ P G PRRAVSGI ARAAMI AVL+ R+ I ND+YLS Sbjct: 298 VTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLS 357 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGGMRLT+P Y ++ +P A+ IGEVGLAGD+RRV GM RRLSEAAR Sbjct: 358 TVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAAR 417 Query: 424 LGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 GFT A+VPP P G+ + A I AA+Q M +IA Sbjct: 418 QGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIA 455 >tr|Q743W8|Q743W8_MYCPA Tax_Id=1770 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium paratuberculosis] Length = 474 Score = 592 bits (1526), Expect = e-167 Identities = 316/460 (68%), Positives = 355/460 (77%), Gaps = 13/460 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 RSQYRCSEC+HV KWVGRC CGTWGTVDEV L+ R + S AVPITS Sbjct: 5 RSQYRCSECRHVTAKWVGRCLECGTWGTVDEVPALSAV----AGRRPRLTAASQAVPITS 60 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 I P +RH TGV ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY Sbjct: 61 IKPDASRHRSTGVDELDRVLGGGVVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALY 120 Query: 127 LSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTTEA 186 +SGEESAGQIRLRA+R GC DQVYLAAESDL L HI VKP+LV+VDSVQTMSTTEA Sbjct: 121 ISGEESAGQIRLRADRIGCGGDQVYLAAESDLHTVLEHIATVKPALVIVDSVQTMSTTEA 180 Query: 187 DGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVLHF 246 DGV GGVTQVRAVT +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVLHF Sbjct: 181 DGVAGGVTQVRAVTAALTAAAKA----NGVALILVGHVTKDGAIAGPRSLEHLVDVVLHF 236 Query: 247 EGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVTVT 306 EGDR SLRMVRG+KNRFGAADEVGCF LHDNGI V+DPS LFLDQR VPGTA+TVT Sbjct: 237 EGDRNGSLRMVRGIKNRFGAADEVGCFLLHDNGIAGVTDPSNLFLDQRSAPVPGTAITVT 296 Query: 307 LDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLSTV 365 LDGKRP+IGEVQAL+ SP G PRRAVSGID +RAAMI AVL+ ++P+ ND+YLSTV Sbjct: 297 LDGKRPLIGEVQALLASPSGGSPRRAVSGIDHSRAAMITAVLEKHGKLPVAVNDIYLSTV 356 Query: 366 GGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAARLG 425 GGMRLTDP ++ +P A+ IGEVGLAGDLRRV+GM RRLSEAAR G Sbjct: 357 GGMRLTDPSSDLAVAIALASALSELPLPTTAVMIGEVGLAGDLRRVSGMARRLSEAARQG 416 Query: 426 FTTAVVPPGVTS----APAGLKVVAADNIRAAVQTMREIA 461 F+ A++P G P+G++ + A I AA++ M +IA Sbjct: 417 FSIALIPDGDDPRREIVPSGMRALRAPTIGAALKHMVDIA 456 >tr|B2HJ26|B2HJ26_MYCMM Tax_Id=216594 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium marinum] Length = 491 Score = 590 bits (1521), Expect = e-166 Identities = 309/474 (65%), Positives = 360/474 (75%), Gaps = 23/474 (4%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLA---GNNKLNGAARRSVAPTSPAVP 63 R QYRC++C+++ KWVGRC C +WGTV+EV+VL+ G ++L A PTS AVP Sbjct: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 Query: 64 ITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKR 123 I+S+ P ++RH PTG+ ELDRVLGGG+V GSVTLLAG+PGVGKSTLLLEVA+RWA SG+R Sbjct: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQR 124 Query: 124 ALYLSGEESAGQIRLRAERTGC---------------THDQVYLAAESDLQIALGHIDEV 168 LY+SGEESAGQIRLRA+R GC ++YLAAESDL L HID V Sbjct: 125 VLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTV 184 Query: 169 KPSLVVVDSVQTMSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDG 228 +LV+VDSVQTMST+E DGVTGGVTQVRAVT +LTA AK+ A+ILVGHVTKDG Sbjct: 185 GSALVIVDSVQTMSTSEVDGVTGGVTQVRAVTAALTAAAKSN----GFALILVGHVTKDG 240 Query: 229 AIAGPRSLEHLVDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSG 288 AIAGPRSLEHLVDVVLHFEGDR LRMVRGVKNRFGAADEVGCF LHDNGIE V+DPS Sbjct: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 Query: 289 LFLDQRPLAVPGTAVTVTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVL 347 LFLDQRP VPGTA+TVTLDGKRP+IGEVQAL++ P G PRRAVSGID ARAAMI AVL Sbjct: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 Query: 348 QTRCRMPINSNDLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGD 407 + R+ + ND+YLSTVGGMRLTDP Y ++ +P A+ IGEVGLAGD Sbjct: 361 EKHARLSLAVNDMYLSTVGGMRLTDPSSDLAVAIALASAYANLPLPTTAVMIGEVGLAGD 420 Query: 408 LRRVTGMDRRLSEAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 LRRV GMDRRL+EAAR GF A+VPPG + PAGL+ + A I AA++ M +IA Sbjct: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIA 474 >tr|A0QAB0|A0QAB0_MYCA1 Tax_Id=243243 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium avium] Length = 459 Score = 568 bits (1464), Expect = e-160 Identities = 305/446 (68%), Positives = 343/446 (76%), Gaps = 13/446 (2%) Query: 21 KWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITSIDPGVTRHYPTGVS 80 KWVGRC CGTWGTVDEV L+ R + S AVPITSI P +RH TGV Sbjct: 4 KWVGRCLECGTWGTVDEVPALSAV----AGRRPRLTAASQAVPITSIKPDASRHRSTGVD 59 Query: 81 ELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALYLSGEESAGQIRLRA 140 ELDRVLGGG+V GSVTLLAGDPGVGKSTLLLEVA+RWA SG+RALY+SGEESAGQIRLRA Sbjct: 60 ELDRVLGGGVVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALYISGEESAGQIRLRA 119 Query: 141 ERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTTEADGVTGGVTQVRAVT 200 +R GC DQVYLAAESDL L H+ VKP+LV+VDSVQTMSTTEADGV GGVTQVRAVT Sbjct: 120 DRIGCGGDQVYLAAESDLHTVLEHVATVKPALVIVDSVQTMSTTEADGVAGGVTQVRAVT 179 Query: 201 TSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVLHFEGDRASSLRMVRGV 260 +LTA AKA VA+ILVGHVTKDGAIAGPRSLEHLVDVVLHFEGDR SLRMVRG+ Sbjct: 180 AALTAAAKA----NGVALILVGHVTKDGAIAGPRSLEHLVDVVLHFEGDRNGSLRMVRGI 235 Query: 261 KNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVTVTLDGKRPMIGEVQAL 320 KNRFGAADEVGCF LHDNGI V+DPS LFLDQR VPGTA+TVTLDGKRP+IGEVQAL Sbjct: 236 KNRFGAADEVGCFLLHDNGIAGVTDPSNLFLDQRSAPVPGTAITVTLDGKRPLIGEVQAL 295 Query: 321 V-SPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLSTVGGMRLTDPXXXXXX 379 + SP G PRRAVSGID +RAAMI AVL+ ++P+ ND+YLSTVGGMRLTDP Sbjct: 296 LASPSGGSPRRAVSGIDHSRAAMITAVLEKHGKLPVAVNDIYLSTVGGMRLTDPSSDLAV 355 Query: 380 XXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAARLGFTTAVVPPGVTS-- 437 ++ +P A+ IGEVGLAGDLRRV+GM RRLSEAAR GF+ A++P G Sbjct: 356 AIALASALSELPLPTTAVMIGEVGLAGDLRRVSGMARRLSEAARQGFSIALIPDGDDPRR 415 Query: 438 --APAGLKVVAADNIRAAVQTMREIA 461 P+G++ + A I AA+Q M +IA Sbjct: 416 EIVPSGMRALRAPTIGAALQHMVDIA 441 >tr|C1BAB9|C1BAB9_RHOOB Tax_Id=632772 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus opacus] Length = 460 Score = 537 bits (1383), Expect = e-150 Identities = 275/463 (59%), Positives = 349/463 (75%), Gaps = 12/463 (2%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARR-----SVAPT 58 +K++S +RCS CQ PKWVGRC CG+WG++DE ++A GA+ +V P+ Sbjct: 2 AKLKSSFRCSSCQCTVPKWVGRCPECGSWGSMDEAPIVASVASRPGASLAKAGAGAVLPS 61 Query: 59 SPAVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWA 118 +PA PIT ID TR PTG+ ELDRVLGGG+V GSV LLAG+PGVGKSTLLLEV ++WA Sbjct: 62 TPATPITRIDSTSTRAKPTGIDELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVHQWA 121 Query: 119 HSGK--RALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVD 176 G R+LY++GEESAGQ+RLRA+RTG H++VYLAAESDL LGH+++V+P+L++VD Sbjct: 122 RRGPDDRSLYVTGEESAGQVRLRADRTGAVHERVYLAAESDLATVLGHVEQVRPTLLIVD 181 Query: 177 SVQTMSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSL 236 SVQTM + DGV GGVTQV+AVT++LT+ AKA+ V ++L+GHVTKDGA+AGPRSL Sbjct: 182 SVQTMLAADVDGVVGGVTQVKAVTSALTSLAKAS----GVPVLLIGHVTKDGAVAGPRSL 237 Query: 237 EHLVDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPL 296 EHLVDVVLHFEGD+ S+LRMVRGVKNRFGAADEVGCF+L ++GI +SDPSGLFL R Sbjct: 238 EHLVDVVLHFEGDKHSTLRMVRGVKNRFGAADEVGCFELREDGIAGISDPSGLFLHHRAE 297 Query: 297 AVPGTAVTVTLDGKRPMIGEVQALVSPPAGP-PRRAVSGIDSARAAMIGAVLQTRCRMPI 355 AVPGTAVTV +DGKRP++GEVQALV+ + P PRRAVSG+DSAR AM+ AVL RC + I Sbjct: 298 AVPGTAVTVMMDGKRPLLGEVQALVAATSMPAPRRAVSGLDSARVAMVLAVLDRRCGVQI 357 Query: 356 NSNDLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMD 415 D+Y +TVGGMR+T+P D A+P + +GEVGLAG++RRV G+ Sbjct: 358 AKQDVYAATVGGMRMTEPSADLALALAVASAVRDRAVPDGLVILGEVGLAGEVRRVPGVG 417 Query: 416 RRLSEAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMR 458 RRL+EA RLGFT A+VP +AP G+KV N+ AA+ ++R Sbjct: 418 RRLAEAHRLGFTRAIVPLDSGAAPKGMKVTEVGNLDAAILSLR 460 >tr|D5PZ33|D5PZ33_COREQ Tax_Id=525370 (radA)SubName: Full=DNA repair protein RadA;[Rhodococcus equi ATCC 33707] Length = 462 Score = 530 bits (1365), Expect = e-148 Identities = 273/462 (59%), Positives = 345/462 (74%), Gaps = 12/462 (2%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGA--ARRSVA---PT 58 +K +S +RCS CQH KWVGRC CGTWG++DE VLA GA AR A P+ Sbjct: 2 AKPKSSFRCSSCQHTVAKWVGRCPECGTWGSMDEAPVLAAVTSRPGASLARAGAAALLPS 61 Query: 59 SPAVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWA 118 +PA PIT ID TR TGV ELDRVLGGG+V GSV LLAG+PGVGKSTLLLEV +RWA Sbjct: 62 TPATPITQIDGKTTRAKATGVDELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVHRWA 121 Query: 119 H--SGKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVD 176 + RALY++GEESAGQ+RLRA+RTG H++VYLAAESDL LGH+++V+P+L++VD Sbjct: 122 SRSADDRALYVTGEESAGQVRLRADRTGAVHERVYLAAESDLATVLGHVEQVRPTLLIVD 181 Query: 177 SVQTMSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSL 236 SVQTM + DGV GGVTQVRA+T++LT+ AKA+ V ++L+GHVTKDGA+AGPRSL Sbjct: 182 SVQTMLAADVDGVVGGVTQVRAITSALTSLAKAS----GVPVLLIGHVTKDGAVAGPRSL 237 Query: 237 EHLVDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPL 296 EHLVDVVLHFEGD+ S+LRM+RG+KNRFGAADEVGCF+L ++GI VSDPSGLFL R Sbjct: 238 EHLVDVVLHFEGDKHSTLRMIRGIKNRFGAADEVGCFELREDGIVGVSDPSGLFLHHRLD 297 Query: 297 AVPGTAVTVTLDGKRPMIGEVQALVSPPAGP-PRRAVSGIDSARAAMIGAVLQTRCRMPI 355 VPGTAVTVT+DGKRP++GEVQALV+P P PRRAVSG+DSAR +M+ AVL+ R + + Sbjct: 298 EVPGTAVTVTMDGKRPLLGEVQALVAPTHNPSPRRAVSGLDSARVSMVLAVLERRHSIKL 357 Query: 356 NSNDLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMD 415 + ++Y +TVGGMR+TDP D +P + +GEVGLAG++RRV+G+ Sbjct: 358 SDKEVYAATVGGMRMTDPSCDLALAIAVASGSKDRPIPAGTVVLGEVGLAGEVRRVSGVG 417 Query: 416 RRLSEAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTM 457 RR++EAARLGFT AVVP P G++ + N+ A++ + Sbjct: 418 RRVAEAARLGFTRAVVPVDSGELPKGIRAIEVANVGDALRAL 459 >tr|Q5Z2R7|Q5Z2R7_NOCFA Tax_Id=37329 (sms)RecName: Full=DNA repair protein radA;[Nocardia farcinica] Length = 462 Score = 527 bits (1358), Expect = e-147 Identities = 273/455 (60%), Positives = 349/455 (76%), Gaps = 9/455 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVP 63 +K ++ +RCS C H KWVG+C +CG WGTVDEVAV AG G RR++ P++ A P Sbjct: 2 AKTKAIFRCSACSHEVAKWVGKCPDCGAWGTVDEVAVSAGAPGAPG--RRAMLPSTAAAP 59 Query: 64 ITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHS-GK 122 I++ID VT+ PTGVSELDRVLGGG+VAGSV LL+G+PGVGKSTLLLEVA++WA G+ Sbjct: 60 ISAIDSQVTKARPTGVSELDRVLGGGVVAGSVVLLSGEPGVGKSTLLLEVAHQWARRPGE 119 Query: 123 RALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMS 182 +ALY++ EESAGQ+RLRA+RTG H+QV+LAAESDL I LGH+++V+P+L+VVDSVQTM Sbjct: 120 KALYVTAEESAGQVRLRADRTGAVHEQVFLAAESDLSIVLGHVEQVRPTLLVVDSVQTML 179 Query: 183 TTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDV 242 EA+GV GGVTQVRAVT +LT+ AKA+ +A++LVGHVTKDG +AGPR+LEHLVDV Sbjct: 180 APEAEGVIGGVTQVRAVTAALTSLAKAS----GIAVLLVGHVTKDGNVAGPRTLEHLVDV 235 Query: 243 VLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTA 302 VL FEGD+ S+LRMVRG+KNRFG+ADEVGCF+LH++GI CV DPSGLFL R VPGTA Sbjct: 236 VLQFEGDKNSTLRMVRGIKNRFGSADEVGCFELHEDGIACVDDPSGLFLHHRTDPVPGTA 295 Query: 303 VTVTLDGKRPMIGEVQAL-VSPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLY 361 VTV +DGKRP++GEVQ L V PRRAVSG+D R AM+ AVLQ+R R+ + +D+Y Sbjct: 296 VTVAMDGKRPLVGEVQGLTVKTEIPAPRRAVSGLDYNRVAMVLAVLQSRGRVFLGKHDVY 355 Query: 362 LSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEA 421 +TVGGMRL +P D A+P + +GEVGLAG++R+VTG+ RRL+EA Sbjct: 356 AATVGGMRLAEPAADLAIALAIASAECDTALPAGWVILGEVGLAGEVRKVTGVARRLAEA 415 Query: 422 ARLGFTTAVVPPGVTSAP-AGLKVVAADNIRAAVQ 455 RLGFTTA+VPPG A ++V ++R+A++ Sbjct: 416 ERLGFTTALVPPGSERLKGATIRVHEVGDVRSALR 450 >tr|C0ZPR4|C0ZPR4_RHOE4 Tax_Id=234621 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus erythropolis] Length = 477 Score = 516 bits (1330), Expect = e-144 Identities = 273/461 (59%), Positives = 343/461 (74%), Gaps = 16/461 (3%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLA-----GNNKLNGAARRSVAPT 58 +K++S YRCSECQ V PKWVGRC +C +WG++ EVAV+A L A +V PT Sbjct: 2 AKVKSNYRCSECQSVVPKWVGRCPDCDSWGSMTEVAVVAPVASRAGASLAKAGSSAVLPT 61 Query: 59 SPAVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWA 118 +PA P+T ID T+ PTG+ ELDRVLGGG+V GSV LLAG+PGVGKSTLLLEV RWA Sbjct: 62 TPATPLTQIDSTSTQAKPTGIGELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVYRWA 121 Query: 119 --HSGKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVD 176 + RALY++GEESAGQ+RLRA+RT H+++YLAAESDL LGHI++VKP+LV+VD Sbjct: 122 MRSADDRALYVTGEESAGQVRLRADRTNSVHERMYLAAESDLATILGHIEQVKPTLVIVD 181 Query: 177 SVQTMSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSL 236 SVQTM + DGV GGVTQV+AVT++LT+ AKA+ + ++L+GHVTKDGA+AGPRSL Sbjct: 182 SVQTMLAADVDGVVGGVTQVKAVTSALTSLAKAS----GIPVLLIGHVTKDGAVAGPRSL 237 Query: 237 EHLVDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPL 296 EHLVDVVLHFEGD+ S+LRMVRGVKNRFGAADEVGCF+L + GI +SDPSGLFL R Sbjct: 238 EHLVDVVLHFEGDKHSTLRMVRGVKNRFGAADEVGCFELSEQGINEISDPSGLFLHHREE 297 Query: 297 AVPGTAVTVTLDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPI 355 AV GTAVTV +DGKRP++GEVQALV + P PRRAVSG+D+AR AM+ AVL+ R + I Sbjct: 298 AVEGTAVTVMMDGKRPLLGEVQALVAATPLPTPRRAVSGLDTARVAMVLAVLERRVGVSI 357 Query: 356 NSNDLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMD 415 + D+Y +TVGGMR+T+P +P + +GEVGLAG++RRV G++ Sbjct: 358 SKADVYAATVGGMRMTEPGADLALAIAVASAVKAKPVPKGLVILGEVGLAGEVRRVAGVN 417 Query: 416 RRLSEAARLGFTTAVVPPGVTSAP--AGLKVVAADNIRAAV 454 RRL EAARLGFT+A+VP V S P G++V N+ A+ Sbjct: 418 RRLIEAARLGFTSAIVP--VDSGPNIPGMRVNEVANLAEAL 456 >tr|C3JUM6|C3JUM6_RHOER Tax_Id=596309 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus erythropolis SK121] Length = 477 Score = 516 bits (1330), Expect = e-144 Identities = 273/461 (59%), Positives = 343/461 (74%), Gaps = 16/461 (3%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLA-----GNNKLNGAARRSVAPT 58 +K++S YRCSECQ V PKWVGRC +C +WG++ EVAV+A L A +V PT Sbjct: 2 AKVKSNYRCSECQSVVPKWVGRCPDCDSWGSMTEVAVVAPVASRAGASLAKAGSSAVLPT 61 Query: 59 SPAVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWA 118 +PA P+T ID T+ PTG+ ELDRVLGGG+V GSV LLAG+PGVGKSTLLLEV RWA Sbjct: 62 TPATPLTQIDSTSTQAKPTGIGELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVYRWA 121 Query: 119 --HSGKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVD 176 + RALY++GEESAGQ+RLRA+RT H+++YLAAESDL LGHI++VKP+LV+VD Sbjct: 122 MRSADDRALYVTGEESAGQVRLRADRTNSVHERMYLAAESDLATILGHIEQVKPTLVIVD 181 Query: 177 SVQTMSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSL 236 SVQTM + DGV GGVTQV+AVT++LT+ AKA+ + ++L+GHVTKDGA+AGPRSL Sbjct: 182 SVQTMLAADVDGVVGGVTQVKAVTSALTSLAKAS----GIPVLLIGHVTKDGAVAGPRSL 237 Query: 237 EHLVDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPL 296 EHLVDVVLHFEGD+ S+LRMVRGVKNRFGAADEVGCF+L + GI +SDPSGLFL R Sbjct: 238 EHLVDVVLHFEGDKHSTLRMVRGVKNRFGAADEVGCFELSEQGINEISDPSGLFLHHREE 297 Query: 297 AVPGTAVTVTLDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPI 355 AV GTAVTV +DGKRP++GEVQALV + P PRRAVSG+D+AR AM+ AVL+ R + I Sbjct: 298 AVEGTAVTVMMDGKRPLLGEVQALVAATPLPTPRRAVSGLDTARVAMVLAVLERRVGVSI 357 Query: 356 NSNDLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMD 415 + D+Y +TVGGMR+T+P +P + +GEVGLAG++RRV G++ Sbjct: 358 SKADVYAATVGGMRMTEPGADLALAIAVASAVKAKPVPKGLVILGEVGLAGEVRRVAGVN 417 Query: 416 RRLSEAARLGFTTAVVPPGVTSAP--AGLKVVAADNIRAAV 454 RRL EAARLGFT+A+VP V S P G++V N+ A+ Sbjct: 418 RRLIEAARLGFTSAIVP--VDSGPNIPGMRVNEVANLAEAL 456 >tr|C7MQ45|C7MQ45_SACVD Tax_Id=471857 RecName: Full=DNA repair protein radA;[Saccharomonospora viridis] Length = 454 Score = 504 bits (1299), Expect = e-141 Identities = 263/455 (57%), Positives = 337/455 (74%), Gaps = 10/455 (2%) Query: 8 SQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITSI 67 S YRC+EC + KW+GRC C WGT++E G+ + A + AP+SPA PI + Sbjct: 6 SSYRCAECGYEVAKWLGRCPECQAWGTIEE----RGDARAPIARVAAGAPSSPARPIAEV 61 Query: 68 DPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWA-HSGKRALY 126 D +R TGVSELDRVLGGGLV G V LLAG+PGVGKSTLLLEVA +WA +SG ALY Sbjct: 62 DLEASRARATGVSELDRVLGGGLVPGVVVLLAGEPGVGKSTLLLEVAYQWAANSGASALY 121 Query: 127 LSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTTEA 186 ++GEESAGQ+RLRAERTG HD+++LAAESDL LGH+D+VKP L++VDSVQTMS+ +A Sbjct: 122 VTGEESAGQVRLRAERTGNVHDRMFLAAESDLAAVLGHVDDVKPGLLIVDSVQTMSSPQA 181 Query: 187 DGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVLHF 246 +G GGVTQV+AVT L A AK + + +LVGHVTK+G++AGPR LEHLVDVVLHF Sbjct: 182 EGAPGGVTQVKAVTAGLVALAK----ERGLPTVLVGHVTKEGSVAGPRVLEHLVDVVLHF 237 Query: 247 EGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVTVT 306 EGD+ S+LRMVRGVKNRFGAADE+GCF+L D+GI V DPSGLFL++ AVPGTAVTVT Sbjct: 238 EGDKHSTLRMVRGVKNRFGAADEIGCFELRDDGIVGVPDPSGLFLNRHAEAVPGTAVTVT 297 Query: 307 LDGKRPMIGEVQALVSPPA-GPPRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLSTV 365 ++GKRP++GEVQALV+ + PRRAVSG+DSAR +M+ AVL+ R P+ D+Y +TV Sbjct: 298 VEGKRPLLGEVQALVTDSSLAQPRRAVSGLDSARVSMVLAVLEKRTGSPLGGKDVYTATV 357 Query: 366 GGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAARLG 425 GGM++T+P D A+ + +AIGEVGLAG++RRVTG+ RRL+EAARLG Sbjct: 358 GGMKVTEPAVDLAVALAVWSGMRDRALSPRLVAIGEVGLAGEVRRVTGVGRRLTEAARLG 417 Query: 426 FTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREI 460 FT A+VPP PA +K + ++ +A++ + + Sbjct: 418 FTHALVPPDSGPLPADIKTLEVADLASALRAVEYV 452 >tr|D5USV0|D5USV0_TSUPA Tax_Id=521096 SubName: Full=DNA repair protein RadA;[Tsukamurella paurometabola DSM 20162] Length = 461 Score = 501 bits (1289), Expect = e-139 Identities = 264/461 (57%), Positives = 335/461 (72%), Gaps = 9/461 (1%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVA-VLAGNNKLNGAARRSVAPTSPAV 62 +K + QY CSEC H KWVGRC +CG W T++E A G A P++PAV Sbjct: 2 AKPKVQYTCSECGHTVAKWVGRCPSCGAWSTMEEGAPARVGGGSGPTAHVGLTLPSTPAV 61 Query: 63 PITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGK 122 PIT IDP TR P G+ ELDRVLGGG+V GSV LLAG+PGVGKSTLLL+V +RWA +G+ Sbjct: 62 PITRIDPNSTRALPVGIGELDRVLGGGIVPGSVILLAGEPGVGKSTLLLDVVHRWASTGR 121 Query: 123 -RALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTM 181 ++LY++GEESAGQ+RLRAERTG D++YLAAESDL LGH++++ P+L+VVDSVQT+ Sbjct: 122 GKSLYVTGEESAGQVRLRAERTGALSDELYLAAESDLGTVLGHVEQISPTLMVVDSVQTL 181 Query: 182 STTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVD 241 S + DGV GGVTQVRA+T +LT+ AKA+ +A+ILVGHVTKDGA+AGPRSLEHLVD Sbjct: 182 SASGVDGVHGGVTQVRAITATLTSLAKAS----GIAVILVGHVTKDGAVAGPRSLEHLVD 237 Query: 242 VVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGT 301 VVL FEGD+ S+LRMVRG+KNRFGA+DEVGCF+ ++GI V+DPSGLFL R A GT Sbjct: 238 VVLSFEGDKHSTLRMVRGIKNRFGASDEVGCFEQRESGIAQVTDPSGLFLHHRDQAAAGT 297 Query: 302 AVTVTLDGKRPMIGEVQALVSP-PAGPPRRAVSGIDSARAAMIGAVLQTRCRMP-INSND 359 AVTV LDGKRPM+GE+QALV+P P PRRAVSG+DSAR AMI AVL + + D Sbjct: 298 AVTVGLDGKRPMLGELQALVTPTPLPQPRRAVSGLDSARVAMILAVLTKHGGIENLAQKD 357 Query: 360 LYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLS 419 +Y +TVGGM++T+P D A+ + +GEVGLAG++RRVTG++RRL+ Sbjct: 358 VYAATVGGMKITEPAADLALALAIASGAADTALRPNTVVLGEVGLAGEVRRVTGVERRLA 417 Query: 420 EAARLGFTTAVVPPGVTSAPAG-LKVVAADNIRAAVQTMRE 459 EA R+GFT A+VPP G +++ A + AV+ R+ Sbjct: 418 EAHRMGFTHAIVPPAQERLRVGDMRIAEAATVAEAVRLSRQ 458 >tr|Q0S893|Q0S893_RHOSR Tax_Id=101510 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus sp.] Length = 428 Score = 492 bits (1266), Expect = e-137 Identities = 258/432 (59%), Positives = 326/432 (75%), Gaps = 12/432 (2%) Query: 35 VDEVAVLAGNNKLNGAARR-----SVAPTSPAVPITSIDPGVTRHYPTGVSELDRVLGGG 89 +DE ++A GA+ +V P++PA PIT ID TR PTG+ ELDRVLGGG Sbjct: 1 MDEAPIVASVASRPGASLAKAGAGAVLPSTPATPITRIDSTSTRAKPTGIDELDRVLGGG 60 Query: 90 LVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGK--RALYLSGEESAGQIRLRAERTGCTH 147 +V GSV LLAG+PGVGKSTLLLEV ++WA G R+LY++GEESAGQ+RLRA+RTG H Sbjct: 61 VVPGSVVLLAGEPGVGKSTLLLEVVHQWARRGPDDRSLYVTGEESAGQVRLRADRTGAVH 120 Query: 148 DQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTTEADGVTGGVTQVRAVTTSLTAYA 207 ++VYLAAESDL LGH+++V+P+L++VDSVQTM + DGV GGVTQV+AVT++LT+ A Sbjct: 121 ERVYLAAESDLATILGHVEQVRPTLLIVDSVQTMLAADVDGVVGGVTQVKAVTSALTSLA 180 Query: 208 KAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVLHFEGDRASSLRMVRGVKNRFGAA 267 KA+ V ++L+GHVTKDGA+AGPRSLEHLVDVVLHFEGD+ S+LRMVRGVKNRFGAA Sbjct: 181 KAS----GVPVLLIGHVTKDGAVAGPRSLEHLVDVVLHFEGDKHSTLRMVRGVKNRFGAA 236 Query: 268 DEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVTVTLDGKRPMIGEVQALVSPPAGP 327 DEVGCF+L ++GI +SDPSGLFL R AVPGTAVTV +DGKRP++GEVQALV+ + P Sbjct: 237 DEVGCFELREDGIAGISDPSGLFLHHRAEAVPGTAVTVMMDGKRPLLGEVQALVAATSMP 296 Query: 328 -PRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLSTVGGMRLTDPXXXXXXXXXXXXX 386 PRRAVSG+DSAR AM+ AVL RC +PI ND+Y +TVGGMR+T+P Sbjct: 297 APRRAVSGLDSARVAMVLAVLDRRCGVPIAKNDVYAATVGGMRMTEPSADLALALAVASA 356 Query: 387 YFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAARLGFTTAVVPPGVTSAPAGLKVVA 446 D +P + +GEVGLAG++RRV G+ RRL+EA RLGFT A+VP +AP G+KV Sbjct: 357 VKDKPVPDGLVILGEVGLAGEVRRVPGVGRRLAEAHRLGFTRAIVPLDSGAAPKGMKVTE 416 Query: 447 ADNIRAAVQTMR 458 N+ AA+ ++R Sbjct: 417 VGNLGAAIASLR 428 >tr|D0L455|D0L455_GORB4 Tax_Id=526226 RecName: Full=DNA repair protein radA;[Gordonia bronchialis] Length = 461 Score = 492 bits (1266), Expect = e-137 Identities = 261/465 (56%), Positives = 328/465 (70%), Gaps = 10/465 (2%) Query: 4 SKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVP 63 +K +S +RC+ C KWVGRC +CG WG+VDEV L +A +VAP+SPA Sbjct: 2 AKPKSTFRCTACGRQVAKWVGRCPDCGEWGSVDEVTTLFAAGT---SATAAVAPSSPARR 58 Query: 64 ITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKR 123 IT ID + PTG+ E DRVLG G+V GSV LLAG+PGVGKSTLLLE WA G+ Sbjct: 59 ITEIDAASSAAVPTGIGEFDRVLGRGVVPGSVILLAGEPGVGKSTLLLETVKHWAGLGRT 118 Query: 124 ALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMST 183 ALY++GEESAGQ+R+RAERTG H+ VYLAAESDL LG +D V+PSL++VDSVQT+ Sbjct: 119 ALYITGEESAGQVRMRAERTGAVHENVYLAAESDLATILGQVDAVRPSLMIVDSVQTVVA 178 Query: 184 TEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVV 243 T ADGVTGGVTQ+RAVTT+L + AK + +A+ILVGHVTKDGA+AGPRSLEHLVDVV Sbjct: 179 TGADGVTGGVTQIRAVTTALVSLAK----NRGIAVILVGHVTKDGAVAGPRSLEHLVDVV 234 Query: 244 LHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAV 303 L FEGDR S+LRMVRG+KNRFG ADEVGCF+ D+GI V+DPSG+FL QR V GTA Sbjct: 235 LSFEGDRHSTLRMVRGIKNRFGPADEVGCFEQRDDGIHQVTDPSGIFLHQRDSDVSGTAT 294 Query: 304 TVTLDGKRPMIGEVQALVS-PPAGPPRRAVSGIDSARAAMIGAVLQTRCRM-PINSNDLY 361 VT+DGKRP++GEVQ+L + PRRAVSG+DSAR AM+ AVLQ+R + I N++Y Sbjct: 295 MVTMDGKRPLVGEVQSLANGSQMATPRRAVSGMDSARVAMVLAVLQSRMGLEQIAKNEIY 354 Query: 362 LSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEA 421 ++TVGGMR+T+P +P IAIGEVGLAG++RRV+ + RR++EA Sbjct: 355 VATVGGMRVTEPAADLAIALAVHSAMTKRPVPATTIAIGEVGLAGEVRRVSAVSRRIAEA 414 Query: 422 ARLGFTTAVVPPGV-TSAPAGLKVVAADNIRAAVQTMREIAIAGA 465 RLGF A++P G P G+++ ++ AAV A+ A Sbjct: 415 QRLGFRHAIIPGGTDEKLPKGMRITRVGDLLAAVTAAGVTAVTDA 459 >tr|C6WGL9|C6WGL9_ACTMD Tax_Id=446462 RecName: Full=DNA repair protein radA;[Actinosynnema mirum] Length = 462 Score = 491 bits (1265), Expect = e-137 Identities = 256/453 (56%), Positives = 329/453 (72%), Gaps = 11/453 (2%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 R YRC+EC H KWVGRC C WGTV+E V A L GA + A PI Sbjct: 9 RPVYRCAECGHEVSKWVGRCPECQAWGTVEERGVAAPARFLAGAT------SGDARPIGQ 62 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKRALY 126 +D +R TGV ELDRVLGGGLV G+V LLAG+PGVGKSTLLLEVA++WA + R LY Sbjct: 63 VDIESSRASATGVGELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLEVAHQWASTVGRCLY 122 Query: 127 LSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTTEA 186 ++GEESAGQ+RLRA+RTG HD++YLAAESD+ LG +D VKPS+++VDSVQTMS+ Sbjct: 123 VTGEESAGQVRLRADRTGNLHDEIYLAAESDISAVLGQVDAVKPSMMIVDSVQTMSSLSI 182 Query: 187 DGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVLHF 246 DG+ GGV+QVRAVT+ L + AK + + +ILVGHVTKDG++AGPR LEHLVDVVL F Sbjct: 183 DGMPGGVSQVRAVTSGLISVAK----ERNLPIILVGHVTKDGSVAGPRVLEHLVDVVLQF 238 Query: 247 EGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVTVT 306 EGDR S+LR++RG+KNRFGAADEVGCF+L D+GI V DPSGLFL++R V G+AVTV Sbjct: 239 EGDRHSTLRLLRGIKNRFGAADEVGCFELRDDGIVGVPDPSGLFLNRREQDVTGSAVTVV 298 Query: 307 LDGKRPMIGEVQALVSPPAGP-PRRAVSGIDSARAAMIGAVLQTRCRMPINSNDLYLSTV 365 ++GKRP++GEVQALV+P + P PRRAVSG+DSAR AM+ AVL+ R R+P+ + D++ +TV Sbjct: 299 VEGKRPLLGEVQALVAPTSLPAPRRAVSGLDSARVAMVMAVLEKRGRVPLGNKDVFAATV 358 Query: 366 GGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAARLG 425 GGMRL +P D +P + +GEVGL+G+LRRV G+ RRLSEAARLG Sbjct: 359 GGMRLVEPSVDLALALAVASAAVDQPLPHDLVVVGEVGLSGELRRVNGVGRRLSEAARLG 418 Query: 426 FTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMR 458 +T A+VPP P + + A+++ A++ ++ Sbjct: 419 YTRALVPPDAGPLPKETRALVANDLGEALRLLK 451 >tr|D3CD59|D3CD59_9ACTO Tax_Id=648999 RecName: Full=DNA repair protein radA;[Micromonospora sp. L5] Length = 483 Score = 480 bits (1236), Expect = e-133 Identities = 256/457 (56%), Positives = 321/457 (70%), Gaps = 14/457 (3%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 R Y C C H PKWVGRC CG WG+V E V ++G S P PA PI + Sbjct: 25 RPAYECDACGHQPPKWVGRCPECGEWGSVVECTVTGP--MVSGRVVSSRMPAEPARPIAT 82 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAH-SGKRAL 125 I R PTGVSELDRVLGGGLV G+V LLAG+PGVGKSTLLL+VA +WA +G +L Sbjct: 83 ISAAPARARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAQQWAAGAGSPSL 142 Query: 126 YLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTTE 185 +SGEES Q+RLRAER G HDQ+YLAAESDL LGH+D VKP L+V+DSVQT+STT Sbjct: 143 VVSGEESVSQVRLRAERMGTLHDQLYLAAESDLSAVLGHLDAVKPGLLVLDSVQTISTTG 202 Query: 186 ADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVLH 245 +GV GGVTQVRAVT +L A AK + +A +LVGHVTKDG +AGPR LEHLVDVVLH Sbjct: 203 TEGVPGGVTQVRAVTAALVAVAK----ERGIATVLVGHVTKDGQVAGPRVLEHLVDVVLH 258 Query: 246 FEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVTV 305 FEGD+ SSLRMVRGVKNRFGAADEVGCF++H+ GI ++DPSGLFL + VPGT VTV Sbjct: 259 FEGDKHSSLRMVRGVKNRFGAADEVGCFEMHEGGISSLADPSGLFLTRYSEPVPGTCVTV 318 Query: 306 TLDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRC-RMPINSNDLYLS 363 ++G+R ++ EVQAL+ + AG PRR VSG+DSAR AM+ AVLQ R R+ ++ +++ + Sbjct: 319 AMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAVLQRRTERLTLHDREVFAA 378 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGG+R+ +P ++A+ +AIGEVGL G++RRV + RRL+EAAR Sbjct: 379 TVGGIRVVEPAADLAVALAVASGGLNLALNPHLVAIGEVGLTGEVRRVGAVPRRLAEAAR 438 Query: 424 LGFTTAVVPPGV-----TSAPAGLKVVAADNIRAAVQ 455 LGF A+VPPG + P ++V+ ++RAA+Q Sbjct: 439 LGFRLALVPPGCGPESSGAGPENMRVIEVTDVRAALQ 475 >tr|D1S8F7|D1S8F7_9ACTO Tax_Id=644283 RecName: Full=DNA repair protein radA;[Micromonospora aurantiaca ATCC 27029] Length = 483 Score = 479 bits (1234), Expect = e-133 Identities = 256/457 (56%), Positives = 321/457 (70%), Gaps = 14/457 (3%) Query: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPAVPITS 66 R Y C C H PKWVGRC CG WG+V E V ++G S P PA PI + Sbjct: 25 RPAYECDACGHQPPKWVGRCPECGEWGSVVECTVTGPI--VSGRVVSSRMPAEPARPIAT 82 Query: 67 IDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAH-SGKRAL 125 I R PTGVSELDRVLGGGLV G+V LLAG+PGVGKSTLLL+VA +WA +G +L Sbjct: 83 ISAAPARARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAQQWAAGAGSPSL 142 Query: 126 YLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQTMSTTE 185 +SGEES Q+RLRAER G HDQ+YLAAESDL LGH+D VKP L+V+DSVQT+STT Sbjct: 143 VVSGEESVSQVRLRAERMGTLHDQLYLAAESDLSAVLGHLDAVKPGLLVLDSVQTISTTG 202 Query: 186 ADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLVDVVLH 245 +GV GGVTQVRAVT +L A AK + +A +LVGHVTKDG +AGPR LEHLVDVVLH Sbjct: 203 TEGVPGGVTQVRAVTATLVAVAK----ERGIATVLVGHVTKDGQVAGPRVLEHLVDVVLH 258 Query: 246 FEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPGTAVTV 305 FEGD+ SSLRMVRGVKNRFGAADEVGCF++H+ GI ++DPSGLFL + VPGT VTV Sbjct: 259 FEGDKHSSLRMVRGVKNRFGAADEVGCFEMHEGGISSLADPSGLFLTRYSEPVPGTCVTV 318 Query: 306 TLDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRC-RMPINSNDLYLS 363 ++G+R ++ EVQAL+ + AG PRR VSG+DSAR AM+ AVLQ R R+ ++ +++ + Sbjct: 319 AMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAVLQRRTERLTLHDREVFAA 378 Query: 364 TVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLSEAAR 423 TVGG+R+ +P ++A+ +AIGEVGL G++RRV + RRL+EAAR Sbjct: 379 TVGGIRVVEPAADLAVALAVASGGLNLALNPHLVAIGEVGLTGEVRRVGAVPRRLAEAAR 438 Query: 424 LGFTTAVVPPGV-----TSAPAGLKVVAADNIRAAVQ 455 LGF A+VPPG + P ++V+ ++RAA+Q Sbjct: 439 LGFRLALVPPGCGPESSGAGPENMRVIEVTDVRAALQ 475 >tr|A4XCP0|A4XCP0_SALTO Tax_Id=369723 RecName: Full=DNA repair protein radA;[Salinispora tropica] Length = 481 Score = 476 bits (1224), Expect = e-132 Identities = 254/466 (54%), Positives = 322/466 (69%), Gaps = 14/466 (3%) Query: 2 AGSKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPA 61 A + R Y C C H PKWVGRC CG WG+V E + ++G S P PA Sbjct: 18 AAREPRPAYECDACGHQPPKWVGRCPECGEWGSVVECTLTGPT--VSGRVVSSRMPAEPA 75 Query: 62 VPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSG 121 PI +I R PTGVSELDRVLGGGLV G+V LLAG+PGVGKSTLLL+VA +WA G Sbjct: 76 RPIATISAAPARARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAQQWAAGG 135 Query: 122 KR-ALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQT 180 +L +SGEES Q+RLRAER G H+Q+YLAAESDL LGH+D VKP L+V+DSVQT Sbjct: 136 ANPSLVVSGEESVSQVRLRAERMGALHEQLYLAAESDLAAVLGHLDAVKPGLLVLDSVQT 195 Query: 181 MSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLV 240 +STT +GV GGVTQVRAVT +L A AK + +A +LVGHVTKDG +AGPR LEHLV Sbjct: 196 ISTTGTEGVPGGVTQVRAVTAALVAVAK----ERGIATLLVGHVTKDGQVAGPRVLEHLV 251 Query: 241 DVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPG 300 DVVLHFEGD+ SSLR+VRGVKNRFGAADEVGCF++H+ GI ++DPSGLFL + VPG Sbjct: 252 DVVLHFEGDKHSSLRLVRGVKNRFGAADEVGCFEMHEGGISSLADPSGLFLTRYSEPVPG 311 Query: 301 TAVTVTLDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRC-RMPINSN 358 T VTV ++G+R ++ EVQAL+ + AG PRR VSG+DSAR AM+ AVLQ R R+ ++ Sbjct: 312 TCVTVAMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAVLQRRTERLTLHDR 371 Query: 359 DLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRL 418 +++ +TVGG+R+ +P ++A+ +AIGEVGL G++RRV + RRL Sbjct: 372 EVFAATVGGIRVVEPAADLAVALAVASGGLNLAITPHLVAIGEVGLTGEVRRVGAVPRRL 431 Query: 419 SEAARLGFTTAVVPPGVTSAPAG-----LKVVAADNIRAAVQTMRE 459 +EA RLGF A+VPPG G L+V+ ++RAA+Q + + Sbjct: 432 AEATRLGFRLALVPPGCGPESTGVRADQLRVIEVSDVRAALQAVAQ 477 >tr|C3PJC3|C3PJC3_CORA7 Tax_Id=548476 (radA)RecName: Full=DNA repair protein radA;[Corynebacterium aurimucosum] Length = 460 Score = 475 bits (1222), Expect = e-132 Identities = 243/459 (52%), Positives = 313/459 (68%), Gaps = 9/459 (1%) Query: 5 KIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVL----AGNNKLNGAARRSVAPTSP 60 K+R + CSEC V+PKW+GRC CG+WGT+ E A A ++G + PTSP Sbjct: 4 KVRPVHTCSECGFVSPKWLGRCPECGSWGTLQETAAAESGTAAQAAVSGRRPTGLTPTSP 63 Query: 61 AVPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHS 120 AVPIT + T+ TG+ ELDRVLG G+V GSV L+AG+PGVGKSTLLLEVA+RWA Sbjct: 64 AVPITKVGASATKAINTGIGELDRVLGRGIVPGSVVLMAGEPGVGKSTLLLEVASRWAQL 123 Query: 121 GKRALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQT 180 G+ ALY + EESAGQ+R RAERTG H+ +YLAAES+L + GH++++KPSL++VDSVQT Sbjct: 124 GRTALYATAEESAGQVRARAERTGALHETLYLAAESNLDVVFGHVEQLKPSLLIVDSVQT 183 Query: 181 MSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLV 240 M +GV GGV Q RAVT +LT AK + ++LVGHVTKDG +AGPR LEHLV Sbjct: 184 MHAAGVEGVAGGVAQSRAVTAALTTLAKTT----GIPILLVGHVTKDGNVAGPRVLEHLV 239 Query: 241 DVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPG 300 DVVL+FEGDR SSLR++RG+KNRFGA DE+GCF+ GI V+DPSGLFL R G Sbjct: 240 DVVLNFEGDRQSSLRLLRGLKNRFGATDEMGCFEQTAAGIREVADPSGLFLSHRGSTPDG 299 Query: 301 TAVTVTLDGKRPMIGEVQAL-VSPPAGPPRRAVSGIDSARAAMIGAVLQTRCRMPINSND 359 +AVTV +DG RP++ EVQAL V P A PRR V+G+D+ R M+ AVLQ R N D Sbjct: 300 SAVTVAMDGVRPILAEVQALTVDPVAKNPRRVVTGLDANRVPMVLAVLQARAGERTNDKD 359 Query: 360 LYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRLS 419 Y++TVGGM++ +P + +P K + IGEVGLAG++RRV +DRRL+ Sbjct: 360 AYVATVGGMKIQEPATDLAVALATWSSLHEQPLPPKTVVIGEVGLAGEVRRVPNLDRRLA 419 Query: 420 EAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMR 458 EAARLG+ A+VPPG G++V A + A+ ++ Sbjct: 420 EAARLGYRYAIVPPGKVEVSGGMQVRQAATLSEAIAALK 458 >tr|A8M7T6|A8M7T6_SALAI Tax_Id=391037 RecName: Full=DNA repair protein radA;[Salinispora arenicola] Length = 499 Score = 474 bits (1220), Expect = e-131 Identities = 256/464 (55%), Positives = 323/464 (69%), Gaps = 14/464 (3%) Query: 2 AGSKIRSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLAGNNKLNGAARRSVAPTSPA 61 A + R Y C C H PKW GRC CG WG+V E + ++G S P PA Sbjct: 18 AAREPRPAYECDACGHQPPKWFGRCPECGEWGSVVECTMTGPT--VSGRVVSSRLPAEPA 75 Query: 62 VPITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSG 121 PI +I + PTGVSELDRVLGGGLV G+V LLAG+PGVGKSTLLL+VA +WA G Sbjct: 76 RPIATISAAPAQARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAQQWAVGG 135 Query: 122 KR-ALYLSGEESAGQIRLRAERTGCTHDQVYLAAESDLQIALGHIDEVKPSLVVVDSVQT 180 +L +SGEES Q+RLRAER G HDQ+YLAAESDL LGH+D VKP L+V+DSVQT Sbjct: 136 TSPSLVVSGEESVSQVRLRAERMGTLHDQLYLAAESDLAAVLGHLDAVKPGLLVLDSVQT 195 Query: 181 MSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDGAIAGPRSLEHLV 240 +STT +GV GGVTQVRAVT +L A AK + +A +LVGHVTKDG +AGPR LEHLV Sbjct: 196 ISTTGTEGVPGGVTQVRAVTAALVAVAK----ERGIATLLVGHVTKDGQVAGPRVLEHLV 251 Query: 241 DVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSGLFLDQRPLAVPG 300 DVVLHFEGD+ SSLR+VRGVKNRFGAADEVGCF++H+ GI ++DPSGLFL + VPG Sbjct: 252 DVVLHFEGDKHSSLRLVRGVKNRFGAADEVGCFEMHEGGISSLADPSGLFLTRYSEPVPG 311 Query: 301 TAVTVTLDGKRPMIGEVQALV-SPPAGPPRRAVSGIDSARAAMIGAVLQTRC-RMPINSN 358 T VTV ++G+R ++ EVQAL+ + AG PRR VSG+DSAR AM+ AVLQ R R+ ++ Sbjct: 312 TCVTVAMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAVLQRRTERLTLHDR 371 Query: 359 DLYLSTVGGMRLTDPXXXXXXXXXXXXXYFDIAMPMKAIAIGEVGLAGDLRRVTGMDRRL 418 +++ +TVGG+R+ +P ++A+ +AIGEVGL G++RRV + RRL Sbjct: 372 EVFAATVGGIRVVEPAADLAVALAVASGGLNLAIAPHLVAIGEVGLTGEVRRVGAVPRRL 431 Query: 419 SEAARLGFTTAVVPPG----VTSAPAG-LKVVAADNIRAAVQTM 457 +EAARLGF A+VPPG T PA L+V+ ++RAA+Q + Sbjct: 432 AEAARLGFRLALVPPGSGPESTGVPADQLRVIEVGDVRAALQAV 475 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.318 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,611,435,692 Number of extensions: 149225254 Number of successful extensions: 610376 Number of sequences better than 10.0: 5580 Number of HSP's gapped: 609155 Number of HSP's successfully gapped: 5778 Length of query: 466 Length of database: 4,236,830,644 Length adjustment: 142 Effective length of query: 324 Effective length of database: 2,460,713,956 Effective search space: 797271321744 Effective search space used: 797271321744 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 83 (36.6 bits)