BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_6153 (402 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R5D5|A0R5D5_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 657 0.0 tr|Q1B2I6|Q1B2I6_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 583 e-164 tr|A1UML2|A1UML2_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 583 e-164 tr|A3Q717|A3Q717_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 581 e-164 tr|A4T5R0|A4T5R0_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 569 e-160 tr|A1TG65|A1TG65_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 566 e-159 tr|Q744B4|Q744B4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 553 e-155 tr|Q7TW17|Q7TW17_MYCBO Tax_Id=1765 SubName: Full=DNA POLYMERASE;... 550 e-154 tr|O06363|O06363_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE DNA PO... 550 e-154 tr|C6DMU5|C6DMU5_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 550 e-154 tr|C1AI96|C1AI96_MYCBT Tax_Id=561275 SubName: Full=DNA polymeras... 550 e-154 tr|A5WTK9|A5WTK9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 550 e-154 tr|A5U8W8|A5U8W8_MYCTA Tax_Id=419947 SubName: Full=DNA polymeras... 550 e-154 tr|A1KPX3|A1KPX3_MYCBP Tax_Id=410289 SubName: Full=DNA polymeras... 550 e-154 tr|Q7D554|Q7D554_MYCTU Tax_Id=1773 (holB)SubName: Full=DNA polym... 550 e-154 tr|D6G4Y1|D6G4Y1_MYCTU Tax_Id=478435 SubName: Full=DNA polymeras... 550 e-154 tr|D6FTQ5|D6FTQ5_MYCTU Tax_Id=611304 SubName: Full=DNA polymeras... 550 e-154 tr|D6FAJ3|D6FAJ3_MYCTU Tax_Id=611303 SubName: Full=DNA polymeras... 550 e-154 tr|D6EYZ2|D6EYZ2_MYCTU Tax_Id=611302 SubName: Full=DNA polymeras... 550 e-154 tr|D5ZMI3|D5ZMI3_MYCTU Tax_Id=537210 SubName: Full=DNA polymeras... 550 e-154 tr|D5YXR4|D5YXR4_MYCTU Tax_Id=515616 SubName: Full=DNA polymeras... 550 e-154 tr|D5YL91|D5YL91_MYCTU Tax_Id=520140 SubName: Full=DNA polymeras... 550 e-154 tr|D5XNE3|D5XNE3_MYCTU Tax_Id=515617 SubName: Full=DNA polymeras... 550 e-154 tr|A4KMB6|A4KMB6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 548 e-154 tr|D5P8S1|D5P8S1_9MYCO Tax_Id=525368 (holB)SubName: Full=DNA-dir... 545 e-153 tr|A0QA63|A0QA63_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 532 e-149 tr|A0PV82|A0PV82_MYCUA Tax_Id=362242 SubName: Full=Conserved pro... 528 e-148 tr|B2HJ77|B2HJ77_MYCMM Tax_Id=216594 SubName: Full=Conserved pro... 527 e-147 tr|O69546|O69546_MYCLE Tax_Id=1769 (MLCB2548.29c)SubName: Full=P... 517 e-144 tr|B8ZU29|B8ZU29_MYCLB Tax_Id=561304 SubName: Full=Putative unch... 517 e-144 tr|B1MGQ6|B1MGQ6_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA ... 494 e-137 tr|D5ZAL6|D5ZAL6_MYCTU Tax_Id=537209 SubName: Full=DNA polymeras... 486 e-135 tr|D5PK29|D5PK29_COREQ Tax_Id=525370 (holB)SubName: Full=DNA-dir... 466 e-129 tr|Q0S8J2|Q0S8J2_RHOSR Tax_Id=101510 SubName: Full=Probable DNA-... 454 e-126 tr|Q5Z2Y1|Q5Z2Y1_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p... 454 e-125 tr|C0ZNH0|C0ZNH0_RHOE4 Tax_Id=234621 (holB)SubName: Full=Putativ... 452 e-125 tr|C3JWH0|C3JWH0_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 452 e-125 tr|C1BA08|C1BA08_RHOOB Tax_Id=632772 (holB)SubName: Full=DNA pol... 449 e-124 tr|D0LEI8|D0LEI8_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 432 e-119 tr|D5UMH5|D5UMH5_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 420 e-115 tr|D5Y9P1|D5Y9P1_MYCTU Tax_Id=520141 SubName: Full=DNA polymeras... 412 e-113 tr|C7MQK6|C7MQK6_SACVD Tax_Id=471857 SubName: Full=DNA polymeras... 371 e-100 tr|A4F6Q3|A4F6Q3_SACEN Tax_Id=405948 (holB)SubName: Full=DNA pol... 367 2e-99 tr|C8X989|C8X989_NAKMY Tax_Id=479431 SubName: Full=DNA-directed ... 354 1e-95 tr|D2S790|D2S790_GEOOG Tax_Id=526225 SubName: Full=DNA polymeras... 341 9e-92 >tr|A0R5D5|A0R5D5_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium smegmatis] Length = 402 Score = 657 bits (1694), Expect = 0.0 Identities = 344/402 (85%), Positives = 344/402 (85%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVFSRLVGQHAVEQELV RGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF Sbjct: 1 MSGVFSRLVGQHAVEQELVAAAAAARGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG Sbjct: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT Sbjct: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA Sbjct: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTADRNENETEELK LK Sbjct: 241 TPSRAYAAAEEMVAVAEAEAVALTADRNENETEELKTALGAGGTGKGTAGTMRGAAGALK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDM Sbjct: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMAEKVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALRG 402 PDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALRG Sbjct: 361 APDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALRG 402 >tr|Q1B2I6|Q1B2I6_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 402 Score = 583 bits (1502), Expect = e-164 Identities = 300/401 (74%), Positives = 320/401 (79%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 M+GVFSRLVGQHAVE ELV RGD+AHS ATGTMTHAWLITGPPGSGRS+AALCF Sbjct: 1 MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS+GVPGCGECRACTTTMAGTHADVRRI+PEGLSI V EMR IVQIASRRPGTG Sbjct: 61 AAALQCTSEGVPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRPGTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 RWQ+VV+EDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIAL Sbjct: 121 RWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS+DAI VLI GDG+ ++ARWAASV GGHVGRARRL D +AR+RRKRAL LARDAA Sbjct: 181 TPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LT DRNE E EEL+ ++ Sbjct: 241 TPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATGAIR 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGA V ANHPDM Sbjct: 301 DLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P++LLRCIEAVLECREALAVNVKPKFAVDAMVAT+GQALR Sbjct: 361 PPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401 >tr|A1UML2|A1UML2_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 402 Score = 583 bits (1502), Expect = e-164 Identities = 300/401 (74%), Positives = 320/401 (79%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 M+GVFSRLVGQHAVE ELV RGD+AHS ATGTMTHAWLITGPPGSGRS+AALCF Sbjct: 1 MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS+GVPGCGECRACTTTMAGTHADVRRI+PEGLSI V EMR IVQIASRRPGTG Sbjct: 61 AAALQCTSEGVPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRPGTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 RWQ+VV+EDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIAL Sbjct: 121 RWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS+DAI VLI GDG+ ++ARWAASV GGHVGRARRL D +AR+RRKRAL LARDAA Sbjct: 181 TPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LT DRNE E EEL+ ++ Sbjct: 241 TPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATGAIR 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGA V ANHPDM Sbjct: 301 DLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P++LLRCIEAVLECREALAVNVKPKFAVDAMVAT+GQALR Sbjct: 361 PPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401 >tr|A3Q717|A3Q717_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 402 Score = 581 bits (1498), Expect = e-164 Identities = 298/401 (74%), Positives = 320/401 (79%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 M+GVFSRLVGQHAVE ELV RGD+AHS ATGTMTHAWLITGPPGSGRS+AALCF Sbjct: 1 MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS+GVPGCG+CRACTTTMAGTHADVRRI+PEGLSI V EMR IVQIASRRPGTG Sbjct: 61 AAALQCTSEGVPGCGDCRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRPGTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 RWQ+VV+EDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRH+AL Sbjct: 121 RWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS+DAI VLI GDG+ ++ARWAASV GGHVGRARRL D +AR+RRKRAL LARDAA Sbjct: 181 TPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LT DRNE E EEL+ ++ Sbjct: 241 TPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATGAIR 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGA V ANHPDM Sbjct: 301 DLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P++LLRCIEAVLECREALAVNVKPKFAVDAMVAT+GQALR Sbjct: 361 PPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401 >tr|A4T5R0|A4T5R0_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 404 Score = 569 bits (1466), Expect = e-160 Identities = 298/403 (73%), Positives = 314/403 (77%), Gaps = 2/403 (0%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSG--VATGTMTHAWLITGPPGSGRSVAAL 58 M+GVFSRLVGQ VE EL+ RGDS H TGTMTHAWLITGPPGSGRS+AAL Sbjct: 1 MAGVFSRLVGQDTVEAELIAAARAARGDSVHDDDPAETGTMTHAWLITGPPGSGRSIAAL 60 Query: 59 CFAAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPG 118 CFAAALQCTS+G PGCGECRACTTTMAGTHADVRRI+PEGLSI V MR IVQIASRRPG Sbjct: 61 CFAAALQCTSEGRPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDAMRAIVQIASRRPG 120 Query: 119 TGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIA 178 TGRWQ+VV+EDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRH+A Sbjct: 121 TGRWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHVA 180 Query: 179 LTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARD 238 L TP ++AIA VLI DGL +ARWAASV GGHVGRARRLATD EARERRKRALGLARD Sbjct: 181 LVTPPVEAIAQVLIDADGLSAAEARWAASVSGGHVGRARRLATDDEARERRKRALGLARD 240 Query: 239 AATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXX 298 AATPSR LT DRNE E+EEL+ Sbjct: 241 AATPSRAYAAAEELVATAEAEAKALTGDRNEAESEELRTALGAGGTGKGTAGTMRGAAGA 300 Query: 299 LKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXX 358 LKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVS+GA V ANHPDM Sbjct: 301 LKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSAGATDVVANHPDMADKVAALAA 360 Query: 359 XXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 PD+LLRCIEAVLECREALAVNVKPKFAVDAMV T+GQALR Sbjct: 361 HAPPDKLLRCIEAVLECREALAVNVKPKFAVDAMVGTVGQALR 403 >tr|A1TG65|A1TG65_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 407 Score = 566 bits (1459), Expect = e-159 Identities = 301/407 (73%), Positives = 314/407 (77%), Gaps = 7/407 (1%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAH------SGVATGTMTHAWLITGPPGSGRS 54 M+GVFSRLVGQ AVE EL RGDS H SGV TGTMTHAWLITGPPGSGRS Sbjct: 1 MTGVFSRLVGQDAVETELTAAARAARGDSPHTSGLDVSGV-TGTMTHAWLITGPPGSGRS 59 Query: 55 VAALCFAAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIAS 114 +AALCFAAALQCTSDG PGCGECRAC TTMAGTHADVRRI+PEGLSI V MR IVQIAS Sbjct: 60 IAALCFAAALQCTSDGTPGCGECRACATTMAGTHADVRRIIPEGLSIGVDAMRAIVQIAS 119 Query: 115 RRPGTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRC 174 RRPGTGRWQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRC Sbjct: 120 RRPGTGRWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRC 179 Query: 175 RHIALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALG 234 RH+AL TP +DAIA VLI DGLP +DA WAA+V GGHVGRARRLATD ARERR+RALG Sbjct: 180 RHVALVTPPVDAIARVLIDSDGLPEKDAEWAAAVSGGHVGRARRLATDERARERRQRALG 239 Query: 235 LARDAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXX 294 LARDAATPSR LT DRNE E EEL+ Sbjct: 240 LARDAATPSRAYAAAEELVATAEAEAKALTEDRNEVEAEELRTALGAGGTGKGTAGTMRG 299 Query: 295 XXXXLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXX 354 LKELEKRQKSR TRASRDALDRALIDLATYFRDALLVSSGA V ANHPDM Sbjct: 300 AAGALKELEKRQKSRHTRASRDALDRALIDLATYFRDALLVSSGATDVVANHPDMAEKVA 359 Query: 355 XXXXXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P++LLRCIEAVLECREALAVNVKPKFAVDAMV T+GQALR Sbjct: 360 AMAAHASPEKLLRCIEAVLECREALAVNVKPKFAVDAMVGTVGQALR 406 >tr|Q744B4|Q744B4_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 401 Score = 553 bits (1426), Expect = e-155 Identities = 287/400 (71%), Positives = 309/400 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AV+ EL+ RGD+ HS GTMTHAWLITGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQDAVKAELLGAARAARGDAGHSDAGAGTMTHAWLITGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCT+DG PGCG C ACTTT+AGTHADVRR+VPEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTADGEPGCGRCHACTTTLAGTHADVRRVVPEGLSIGVDEMRAIVQIAARRPATG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPED+AITLRSRCRH+AL Sbjct: 121 NWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDVAITLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS +AIA VL+ DGL PE A WAASV GGHVGRARRLATDPEAR+RR+RALGL RDAA Sbjct: 181 TPSTEAIARVLVDSDGLTPETADWAASVSGGHVGRARRLATDPEARQRRERALGLVRDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA+R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAAAEAEAVVLTAERAEAETEELRTALGAGGTGKGTAGAMRGAAGAIK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+ QKSRQTRASRDALDRALIDLATYFRDAL+ SSGA V ANHPDM Sbjct: 301 DLERCQKSRQTRASRDALDRALIDLATYFRDALMASSGAGAVRANHPDMAERVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQAL 400 P+RLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQ L Sbjct: 361 PPERLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQQL 400 >tr|Q7TW17|Q7TW17_MYCBO Tax_Id=1765 SubName: Full=DNA POLYMERASE; EC=2.7.7.-;[Mycobacterium bovis] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|O06363|O06363_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE DNA POLYMERASE; EC=2.7.7.-;[Mycobacterium tuberculosis] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|C6DMU5|C6DMU5_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis] Length = 402 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 2 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 61 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 62 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 121 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 122 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 181 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 182 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 241 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 242 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 301 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 302 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 361 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 362 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 402 >tr|C1AI96|C1AI96_MYCBT Tax_Id=561275 SubName: Full=DNA polymerase III subunit delta; EC=2.7.7.7;[Mycobacterium bovis] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|A5WTK9|A5WTK9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical DNA polymerase;[Mycobacterium tuberculosis] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|A5U8W8|A5U8W8_MYCTA Tax_Id=419947 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium tuberculosis] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|A1KPX3|A1KPX3_MYCBP Tax_Id=410289 SubName: Full=DNA polymerase; EC=2.7.7.-;[Mycobacterium bovis] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|Q7D554|Q7D554_MYCTU Tax_Id=1773 (holB)SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 404 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 4 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 63 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 64 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 123 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 124 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 183 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 184 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 243 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 244 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 303 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 304 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 363 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 364 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 404 >tr|D6G4Y1|D6G4Y1_MYCTU Tax_Id=478435 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis KZN 605] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|D6FTQ5|D6FTQ5_MYCTU Tax_Id=611304 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis K85] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|D6FAJ3|D6FAJ3_MYCTU Tax_Id=611303 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis CPHL_A] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|D6EYZ2|D6EYZ2_MYCTU Tax_Id=611302 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis T46] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|D5ZMI3|D5ZMI3_MYCTU Tax_Id=537210 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis T17] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|D5YXR4|D5YXR4_MYCTU Tax_Id=515616 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium tuberculosis 02_1987] Length = 402 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 2 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 61 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 62 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 121 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 122 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 181 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 182 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 241 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 242 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 301 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 302 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 361 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 362 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 402 >tr|D5YL91|D5YL91_MYCTU Tax_Id=520140 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium tuberculosis EAS054] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|D5XNE3|D5XNE3_MYCTU Tax_Id=515617 SubName: Full=DNA polymerase;[Mycobacterium tuberculosis T92] Length = 401 Score = 550 bits (1416), Expect = e-154 Identities = 288/401 (71%), Positives = 309/401 (77%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|A4KMB6|A4KMB6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical DNA polymerase;[Mycobacterium tuberculosis str. Haarlem] Length = 401 Score = 548 bits (1412), Expect = e-154 Identities = 287/401 (71%), Positives = 308/401 (76%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTGNWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA R E ETEEL+ +K Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401 >tr|D5P8S1|D5P8S1_9MYCO Tax_Id=525368 (holB)SubName: Full=DNA-directed DNA polymerase III subunit delta'; EC=2.7.7.7;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 406 Score = 545 bits (1403), Expect = e-153 Identities = 290/404 (71%), Positives = 307/404 (75%), Gaps = 3/404 (0%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AV EL+ RGD HS GTMTHAWLITGPPGSGRSVAALCF Sbjct: 2 MSGVFTRLVGQDAVTAELLAAARAARGDPVHSEAGAGTMTHAWLITGPPGSGRSVAALCF 61 Query: 61 AAALQCTS---DGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRP 117 AAALQCTS DG PGCG CRACTTTMAGTHADVRR++PEGLSI V EMR IVQIASRRP Sbjct: 62 AAALQCTSAVEDGGPGCGNCRACTTTMAGTHADVRRVIPEGLSIGVDEMRAIVQIASRRP 121 Query: 118 GTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHI 177 TG Q+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRH+ Sbjct: 122 ATGHRQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHV 181 Query: 178 ALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLAR 237 AL TP +AIA VLI DGL PE A WAASV GGHVGRARRLATDPEAR+RR+RAL L R Sbjct: 182 ALVTPPTEAIARVLIDSDGLSPETADWAASVSGGHVGRARRLATDPEARDRRERALALVR 241 Query: 238 DAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXX 297 DAATPSR LTADR E ETEEL+ Sbjct: 242 DAATPSRAYAAAEELVASAEAEAVVLTADRAEAETEELRTALGAGGTGKGTAGAMRGAAG 301 Query: 298 XLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXX 357 +K+LE+RQKSRQTRASRDALDRALIDLATYFRDAL+VS+GA +V ANHPDM Sbjct: 302 AMKDLERRQKSRQTRASRDALDRALIDLATYFRDALMVSAGAASVRANHPDMAERVSALA 361 Query: 358 XXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P RLLRCIEAVLECREALA+NVKPKFAVDAMVAT GQ LR Sbjct: 362 AHASPPRLLRCIEAVLECREALAMNVKPKFAVDAMVATFGQELR 405 >tr|A0QA63|A0QA63_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium avium] Length = 388 Score = 532 bits (1371), Expect = e-149 Identities = 275/387 (71%), Positives = 297/387 (76%) Query: 14 VEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCFAAALQCTSDGVPG 73 ++ EL+ RGD+ HS GTMTHAWLITGPPGSGRSVAALCFAAALQCT+DG PG Sbjct: 1 MKAELLGAARAARGDAGHSDAGAGTMTHAWLITGPPGSGRSVAALCFAAALQCTADGEPG 60 Query: 74 CGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTGRWQVVVIEDADRL 133 CG C ACTTT+AGTHADVRR+VPEGLSI V MR IVQIA+RRP TG WQ+VVIEDADRL Sbjct: 61 CGRCHACTTTLAGTHADVRRVVPEGLSIGVDGMRAIVQIAARRPATGNWQIVVIEDADRL 120 Query: 134 TEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALTTPSIDAIADVLIT 193 TEGAANALLKVVEEPPPSTVFLLCAPSVDPED+AITLRSRCRH+AL TPS +AIA VL+ Sbjct: 121 TEGAANALLKVVEEPPPSTVFLLCAPSVDPEDVAITLRSRCRHVALVTPSTEAIARVLVD 180 Query: 194 GDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAATPSRXXXXXXXXX 253 DGL PE A WAASV GGHVGRARRLATDPEAR+RR+RALGL RDAATPSR Sbjct: 181 SDGLTPETADWAASVSGGHVGRARRLATDPEARQRRERALGLVRDAATPSRAYAAAEELV 240 Query: 254 XXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLKELEKRQKSRQTRA 313 LTA+R E ETEEL+ +K+LE+RQKSRQTRA Sbjct: 241 AAAEAEAVVLTAERAEAETEELRTALGAGGTGKGTAGAMRGAAGAIKDLERRQKSRQTRA 300 Query: 314 SRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXXXPDRLLRCIEAVL 373 SRDALDRALIDLATYFRDAL+ SSGA V ANHPDM P+RLLRCIEAVL Sbjct: 301 SRDALDRALIDLATYFRDALMASSGAGAVRANHPDMAERVAALAAHAPPERLLRCIEAVL 360 Query: 374 ECREALAVNVKPKFAVDAMVATIGQAL 400 ECREALAVNVKPKFAVDAMVATIGQ L Sbjct: 361 ECREALAVNVKPKFAVDAMVATIGQQL 387 >tr|A0PV82|A0PV82_MYCUA Tax_Id=362242 SubName: Full=Conserved protein;[Mycobacterium ulcerans] Length = 401 Score = 528 bits (1361), Expect = e-148 Identities = 277/401 (69%), Positives = 302/401 (75%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DS HS G MTHAWLITGPPGSGRS+AALCF Sbjct: 1 MSGVFARLVGQGAVESELLAAARSARSDSTHSSGFDGDMTHAWLITGPPGSGRSIAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTSDG PGCG CR+C TTMAGTHADVRR++PEGLSI V +MR IVQIASRRP TG Sbjct: 61 AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 R Q+V+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TP AIA VLI DGL E A WAASV GGHVGRARRLATDPEAR+RR+RALGL RDAA Sbjct: 181 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TP+R LT+DR E ETEEL+ +K Sbjct: 241 TPARAYAAAEELVAAAEAEALALTSDRAEAETEELRTALGAGGTGKGTAGTMRGSAGAIK 300 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSR TRA+RDALDRALIDLATYFRDALLVS+ A+ ANHPDM Sbjct: 301 DLERRQKSRHTRAARDALDRALIDLATYFRDALLVSAKADQPRANHPDMADRVAALAAHA 360 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ LR Sbjct: 361 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLR 401 >tr|B2HJ77|B2HJ77_MYCMM Tax_Id=216594 SubName: Full=Conserved protein;[Mycobacterium marinum] Length = 405 Score = 527 bits (1357), Expect = e-147 Identities = 276/401 (68%), Positives = 302/401 (75%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DS HS G MTHAWLITGPPGSGRS+AALCF Sbjct: 5 MSGVFARLVGQGAVESELLAAARSARSDSTHSSGFDGDMTHAWLITGPPGSGRSIAALCF 64 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTSDG PGCG CR+C TTMAGTHADVRR++PEGLSI V +MR IVQIASRRP TG Sbjct: 65 AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 R Q+V+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TP AIA VLI DGL E A WAASV GGHVGRARRLATDPEAR+RR+RALGL RDAA Sbjct: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDAA 244 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TP+R LT+DR E ETEEL+ +K Sbjct: 245 TPARAYAAAEELVAAAEAEALALTSDRAEAETEELRTALGAGGTGKGTAGTMRGSAGAIK 304 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 +LE+RQKSR TRA+RDALDRALIDLATYFRDALLVS+ A+ ANHPDM Sbjct: 305 DLERRQKSRHTRAARDALDRALIDLATYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ L+ Sbjct: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405 >tr|O69546|O69546_MYCLE Tax_Id=1769 (MLCB2548.29c)SubName: Full=Putative uncharacterized protein ML0202; SubName: Full=Putative uncharacterized protein MLCB2548.29c;[Mycobacterium leprae] Length = 405 Score = 517 bits (1331), Expect = e-144 Identities = 275/404 (68%), Positives = 299/404 (74%), Gaps = 3/404 (0%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R D HS A GTMTHAWLITGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQDAVEAELLAAAKAARSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 Query: 61 AAALQCTSD---GVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRP 117 AAALQCT+D G PGCG CRACTTTMAGTHADVRR++P+GLSI V EMR IV ASRRP Sbjct: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 Query: 118 GTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHI 177 TG WQ+V+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRSRCRH+ Sbjct: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 Query: 178 ALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLAR 237 AL TPS AIA VLI DGL + A WAA V GGHVG ARRLATDPEA++RR+RA GL R Sbjct: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 Query: 238 DAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXX 297 DA PSR LTA+R E ETEEL+ Sbjct: 241 DAVVPSRAYAVAEELVAAAEAEALVLTAERAEAETEELRTALGAGGTGKGTAGALRSVTG 300 Query: 298 XLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXX 357 +K+LE+RQKSRQTRASRDALDR LIDLATYFRDALLVS+ A +V NHPDM Sbjct: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 Query: 358 XXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVLECREALAVNVKPKFAVDA+VATIGQ LR Sbjct: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 >tr|B8ZU29|B8ZU29_MYCLB Tax_Id=561304 SubName: Full=Putative uncharacterized protein;[Mycobacterium leprae] Length = 405 Score = 517 bits (1331), Expect = e-144 Identities = 275/404 (68%), Positives = 299/404 (74%), Gaps = 3/404 (0%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R D HS A GTMTHAWLITGPPGSGRSVAA+CF Sbjct: 1 MSGVFTRLVGQDAVEAELLAAAKAARSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60 Query: 61 AAALQCTSD---GVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRP 117 AAALQCT+D G PGCG CRACTTTMAGTHADVRR++P+GLSI V EMR IV ASRRP Sbjct: 61 AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120 Query: 118 GTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHI 177 TG WQ+V+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSV PEDIA+TLRSRCRH+ Sbjct: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180 Query: 178 ALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLAR 237 AL TPS AIA VLI DGL + A WAA V GGHVG ARRLATDPEA++RR+RA GL R Sbjct: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240 Query: 238 DAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXX 297 DA PSR LTA+R E ETEEL+ Sbjct: 241 DAVVPSRAYAVAEELVAAAEAEALVLTAERAEAETEELRTALGAGGTGKGTAGALRSVTG 300 Query: 298 XLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXX 357 +K+LE+RQKSRQTRASRDALDR LIDLATYFRDALLVS+ A +V NHPDM Sbjct: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360 Query: 358 XXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVLECREALAVNVKPKFAVDA+VATIGQ LR Sbjct: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404 >tr|B1MGQ6|B1MGQ6_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA polymerase III, delta' subunit;[Mycobacterium abscessus] Length = 401 Score = 494 bits (1271), Expect = e-137 Identities = 267/404 (66%), Positives = 290/404 (71%), Gaps = 9/404 (2%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF RLV Q AV L RGD A G MTHAWL TGPPGSGRSVAALCF Sbjct: 1 MSGVFGRLVDQGAVVSTLSSSALAARGDDA------GRMTHAWLFTGPPGSGRSVAALCF 54 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQC S+ V GCG CR CTTTMAGTHADVRR+VPEGLSI V EMR IVQ A RRP TG Sbjct: 55 AAALQCESEDVAGCGACRPCTTTMAGTHADVRRVVPEGLSIGVDEMRAIVQAAWRRPSTG 114 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 RW VV+IEDADRLTEGA N LLKVVEEPPP TVFLLCAPSVDPEDI+ITLRSRCRH+AL Sbjct: 115 RWLVVLIEDADRLTEGAGNVLLKVVEEPPPRTVFLLCAPSVDPEDISITLRSRCRHVALV 174 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS+ AIA VL+ DG+ E A+WAASV GGHVGRARRLATD +AR RR +ALGLAR+AA Sbjct: 175 TPSVAAIAQVLVDRDGIDAEQAQWAASVSGGHVGRARRLATDEQARARRLKALGLAREAA 234 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 TPSR LTA RNE E EELK LK Sbjct: 235 TPSRAYAAAEELVTSADAEAKELTAARNEAEEEELKTALGAGGTGKGAATALRGSAGVLK 294 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGA---NTVTANHPDMXXXXXXXX 357 +LE++QKSRQTRASRDALDR LIDLATYFRDAL++S GA V +HPDM Sbjct: 295 DLERKQKSRQTRASRDALDRTLIDLATYFRDALVLSFGAAGQGRVALHHPDMADRLGPMV 354 Query: 358 XXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P++LL+CIEAVLECREALAVNVKPKFA+DA+VAT GQALR Sbjct: 355 DRVPPEQLLKCIEAVLECREALAVNVKPKFAIDALVATAGQALR 398 >tr|D5ZAL6|D5ZAL6_MYCTU Tax_Id=537209 SubName: Full=DNA polymerase III subunit delta; Flags: Fragment;[Mycobacterium tuberculosis GM 1503] Length = 354 Score = 486 bits (1251), Expect = e-135 Identities = 255/352 (72%), Positives = 273/352 (77%) Query: 50 GSGRSVAALCFAAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREI 109 GSGRSVAALCFAAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR I Sbjct: 3 GSGRSVAALCFAAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAI 62 Query: 110 VQIASRRPGTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAIT 169 VQIA+RRP TG WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+T Sbjct: 63 VQIAARRPTTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVT 122 Query: 170 LRSRCRHIALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERR 229 LRSRCRH+AL TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR Sbjct: 123 LRSRCRHVALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRR 182 Query: 230 KRALGLARDAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXX 289 +RALGLARDAATPSR LTA R E ETEEL+ Sbjct: 183 ERALGLARDAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTG 242 Query: 290 XXXXXXXXXLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDM 349 +K+LE+RQKSRQTRASRDALDRALIDLATYFRDALLV++ A V ANHPDM Sbjct: 243 AALRGATGAMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDM 302 Query: 350 XXXXXXXXXXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+RLLRCIEAVL CREALAVNVKPKFAVDAMVATIGQ LR Sbjct: 303 ADRVAALAAHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 354 >tr|D5PK29|D5PK29_COREQ Tax_Id=525370 (holB)SubName: Full=DNA-directed DNA polymerase III subunit delta'; EC=2.7.7.7;[Rhodococcus equi ATCC 33707] Length = 395 Score = 466 bits (1198), Expect = e-129 Identities = 249/401 (62%), Positives = 279/401 (69%), Gaps = 6/401 (1%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 M+GVF RLVGQ VE EL RG A S MTH+WL TGPPGSGRSVAA+CF Sbjct: 1 MAGVFDRLVGQEHVEAELTAAATAARGGDAGS-----RMTHSWLFTGPPGSGRSVAAVCF 55 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS+GVPGCGEC+ACTTTMAGTH DVRR+VPEGLSI+V EMR IVQ ASRRP TG Sbjct: 56 AAALQCTSEGVPGCGECQACTTTMAGTHGDVRRVVPEGLSISVSEMRGIVQTASRRPSTG 115 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 RWQVVV+EDADRLTEGAANALLKVVEEPP TVFLLCAPSVDP+DI++TLRSRCRHI L Sbjct: 116 RWQVVVVEDADRLTEGAANALLKVVEEPPERTVFLLCAPSVDPQDISVTLRSRCRHIPLV 175 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS+DAIA VL D L E + WAAS+CGGHVGRARRLA D +AR RRKRAL LA A Sbjct: 176 TPSVDAIAQVLRERDHLDAETSDWAASICGGHVGRARRLARDEDARSRRKRALALAGAAL 235 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 P LTA+R+E ETEE++ LK Sbjct: 236 RPGTAYAAAEELVQSAELEARELTAERDERETEEMRTALGAGGTGKGAAGALRGSAGVLK 295 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXX 360 ELE+RQKSR TR RD+LDRAL+DLA +RDAL S G ++ T NHPDM Sbjct: 296 ELERRQKSRATRTGRDSLDRALMDLAGLYRDALAYSFG-SSATPNHPDMAEQAADLAGRT 354 Query: 361 XPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 + LLRCIEA+L+CREAL NVKPKFA DA+VA +G R Sbjct: 355 SREGLLRCIEAILDCREALDQNVKPKFAADALVARLGAEFR 395 >tr|Q0S8J2|Q0S8J2_RHOSR Tax_Id=101510 SubName: Full=Probable DNA-directed DNA polymerase III delta prime subunit; EC=2.7.7.7;[Rhodococcus sp.] Length = 404 Score = 454 bits (1169), Expect = e-126 Identities = 246/398 (61%), Positives = 276/398 (69%), Gaps = 4/398 (1%) Query: 4 VFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCFAAA 63 VF RLVGQ VE EL R G +MTH+WL TGPPGSGRSVAA CFAAA Sbjct: 3 VFDRLVGQEDVEAELTAAATAARRGVGAMG---SSMTHSWLFTGPPGSGRSVAAQCFAAA 59 Query: 64 LQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTGRWQ 123 LQCTSDGVPGCG C ACTT MAGTH DVR++VPEGLSI+VKEMR IVQ A+RRP TGRWQ Sbjct: 60 LQCTSDGVPGCGVCHACTTAMAGTHGDVRQVVPEGLSISVKEMRAIVQTAARRPSTGRWQ 119 Query: 124 VVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALTTPS 183 +VV+EDADRLTEGAANALLKVVEEPP TVFLLCAPSVDP+DI++TLRSRCRH+ L TPS Sbjct: 120 IVVVEDADRLTEGAANALLKVVEEPPDRTVFLLCAPSVDPQDISVTLRSRCRHVHLVTPS 179 Query: 184 IDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAATPS 243 D+IA VL DGL P DA+ AAS+ GGHVGRARRLATD A+ RRK AL LA A P+ Sbjct: 180 ADSIAKVLRERDGLDPADAQLAASISGGHVGRARRLATDLNAKVRRKDALDLAVAALRPA 239 Query: 244 RXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLKELE 303 ++A R+E ETEEL+ LK+LE Sbjct: 240 TAFAAAEELVRSADAEAKEMSASRDEQETEELRTALGAGGTGKGAAGALRGSAGVLKDLE 299 Query: 304 KRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXXXPD 363 KRQKSR TR RDALDRALIDLA +RDAL V+ +N ANHPDM P+ Sbjct: 300 KRQKSRATRTGRDALDRALIDLAGLYRDALAVAWKSN-AAANHPDMADRAADLASRTTPE 358 Query: 364 RLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 LLRCIEAVLECREA+ VNVKP++AVDAMVAT+G A R Sbjct: 359 GLLRCIEAVLECREAITVNVKPQWAVDAMVATLGDAFR 396 >tr|Q5Z2Y1|Q5Z2Y1_NOCFA Tax_Id=37329 SubName: Full=Putative DNA polymerase III delta' subunit;[Nocardia farcinica] Length = 410 Score = 454 bits (1168), Expect = e-125 Identities = 248/405 (61%), Positives = 275/405 (67%), Gaps = 8/405 (1%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 ++GVF RLVGQ AVE EL +A +G G MTH+WL TGPPGSGRSVAALCF Sbjct: 11 VAGVFDRLVGQDAVESELTAAAV-----AARAGSVEGAMTHSWLFTGPPGSGRSVAALCF 65 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCT G PGCG C ACTTTMAGTH DVRR+VPEGLSI+ KEMREIVQIASRRP TG Sbjct: 66 AAALQCTDPGTPGCGRCHACTTTMAGTHGDVRRVVPEGLSISTKEMREIVQIASRRPSTG 125 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 RWQVVVIEDADRLTE A N LLKVVEEPP TVFLLCAPSVDPEDI++TLRSRCRH+ L Sbjct: 126 RWQVVVIEDADRLTEAAGNVLLKVVEEPPERTVFLLCAPSVDPEDISVTLRSRCRHVHLV 185 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS+ AIA VL DGL + A WAASV GGHVGRARRLATD ARERR+RAL LA AA Sbjct: 186 TPSVAAIATVLRERDGLDAKTAEWAASVSGGHVGRARRLATDAHARERRQRALALAAAAA 245 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLK 300 P ++A+R+E E EEL LK Sbjct: 246 RPGAAYAAADELVKAADDEAKEMSAERDEREREELATALGAGGTGKGAASATRGSAGVLK 305 Query: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLV---SSGANTVTANHPDMXXXXXXXX 357 ELE+RQKSR TR RDALDRALID+A +RDAL V + A+ VT HPDM Sbjct: 306 ELERRQKSRATRTGRDALDRALIDVAGLYRDALAVRFAAHDADAVTLTHPDMTEQIHDLA 365 Query: 358 XXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALRG 402 P+ LLR I+AVL CREAL +NVKP+FAV AMVAT+ A G Sbjct: 366 DRVPPEGLLRSIDAVLACREALDLNVKPRFAVAAMVATLIAAQSG 410 >tr|C0ZNH0|C0ZNH0_RHOE4 Tax_Id=234621 (holB)SubName: Full=Putative DNA polymerase III delta' subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 409 Score = 452 bits (1162), Expect = e-125 Identities = 245/399 (61%), Positives = 275/399 (68%), Gaps = 6/399 (1%) Query: 3 GVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCFAA 62 GVF RLVGQH VEQ L RGDS+ S MTHAWL TGPPGSGRSVAALCFAA Sbjct: 9 GVFGRLVGQHDVEQSLRDAALSARGDSSGS-----EMTHAWLFTGPPGSGRSVAALCFAA 63 Query: 63 ALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTGRW 122 ALQCTSDG PGCGEC ACTTTM GTH DVRRI+P+GLSI+VK MREIV IASRRP TGRW Sbjct: 64 ALQCTSDGAPGCGECHACTTTMGGTHGDVRRIIPDGLSISVKGMREIVNIASRRPTTGRW 123 Query: 123 QVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALTTP 182 QV+V+EDADRLTEGAANALLKVVEEPP TV LLCAP+ DPED+++TLRSRCRH+ L TP Sbjct: 124 QVIVVEDADRLTEGAANALLKVVEEPPDRTVILLCAPTTDPEDMSVTLRSRCRHMPLVTP 183 Query: 183 SIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAATP 242 S+++IA VLI DGL PE AR AAS+ GGHVGRARRLATD AR+ R+R+L LA DA Sbjct: 184 SVESIAQVLIDRDGLDPERARIAASISGGHVGRARRLATDESARDERQRSLRLAADAIGA 243 Query: 243 SRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLKEL 302 S A+ E E EELK +K+L Sbjct: 244 STAYKAAENLVKSIEADTKAFYAELKEQELEELKVSLGGGGTGKGTAGTLRGSAGLIKDL 303 Query: 303 EKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXXXP 362 E RQKSR TRA RD LDR LIDLA +RDAL S G +T TA HPDM P Sbjct: 304 EARQKSRDTRARRDLLDRTLIDLAGMYRDALSYSLG-STSTATHPDMARQAAELAARTSP 362 Query: 363 DRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 + LL+CIEAVLECREA+ NVK ++A+DAMVA+IG A R Sbjct: 363 EGLLKCIEAVLECREAVDFNVKLQWALDAMVASIGAAFR 401 >tr|C3JWH0|C3JWH0_RHOER Tax_Id=596309 SubName: Full=DNA polymerase III subunit delta;[Rhodococcus erythropolis SK121] Length = 405 Score = 452 bits (1162), Expect = e-125 Identities = 245/399 (61%), Positives = 275/399 (68%), Gaps = 6/399 (1%) Query: 3 GVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCFAA 62 GVF RLVGQH VEQ L RGDS+ S MTHAWL TGPPGSGRSVAALCFAA Sbjct: 5 GVFGRLVGQHDVEQSLRDAALSARGDSSGS-----EMTHAWLFTGPPGSGRSVAALCFAA 59 Query: 63 ALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTGRW 122 ALQCTSDG PGCGEC ACTTTM GTH DVRRI+P+GLSI+VK MREIV IASRRP TGRW Sbjct: 60 ALQCTSDGAPGCGECHACTTTMGGTHGDVRRIIPDGLSISVKGMREIVNIASRRPTTGRW 119 Query: 123 QVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALTTP 182 QV+V+EDADRLTEGAANALLKVVEEPP TV LLCAP+ DPED+++TLRSRCRH+ L TP Sbjct: 120 QVIVVEDADRLTEGAANALLKVVEEPPDRTVILLCAPTTDPEDMSVTLRSRCRHMPLVTP 179 Query: 183 SIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAATP 242 S+++IA VLI DGL PE AR AAS+ GGHVGRARRLATD AR+ R+R+L LA DA Sbjct: 180 SVESIAQVLIDRDGLDPERARIAASISGGHVGRARRLATDESARDERQRSLRLAADAIGA 239 Query: 243 SRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLKEL 302 S A+ E E EELK +K+L Sbjct: 240 STAYKAAENLVKSIEADTKAFYAELKEQELEELKVSLGGGGTGKGTAGTLRGSAGLIKDL 299 Query: 303 EKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXXXP 362 E RQKSR TRA RD LDR LIDLA +RDAL S G +T TA HPDM P Sbjct: 300 EARQKSRDTRARRDLLDRTLIDLAGMYRDALSCSLG-STSTATHPDMARQAAELAARTSP 358 Query: 363 DRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 + LL+CIEAVLECREA+ NVK ++A+DAMVA+IG A R Sbjct: 359 EGLLKCIEAVLECREAVDFNVKLQWALDAMVASIGAAFR 397 >tr|C1BA08|C1BA08_RHOOB Tax_Id=632772 (holB)SubName: Full=DNA polymerase III delta' subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 404 Score = 449 bits (1154), Expect = e-124 Identities = 243/398 (61%), Positives = 275/398 (69%), Gaps = 4/398 (1%) Query: 4 VFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCFAAA 63 VF RLVGQ VE EL R G +MTH+WL TGPPGSGRSVAA CFAAA Sbjct: 3 VFDRLVGQEDVESELTAAATAARRGVGEMG---SSMTHSWLFTGPPGSGRSVAAQCFAAA 59 Query: 64 LQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTGRWQ 123 LQCTS+G PGCG C ACTT MAGTH DVR++VPEGLSI+VKEMR VQ A+RRP TGRWQ Sbjct: 60 LQCTSEGTPGCGVCHACTTAMAGTHGDVRQVVPEGLSISVKEMRATVQTAARRPSTGRWQ 119 Query: 124 VVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALTTPS 183 +VV+EDADRLTEGAANALLKVVEEPP TVFLLCAPSVDP+DI++TLRSRCRHI L TPS Sbjct: 120 IVVVEDADRLTEGAANALLKVVEEPPDRTVFLLCAPSVDPQDISVTLRSRCRHIHLVTPS 179 Query: 184 IDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAATPS 243 D+IA VL DGL PE A+ AAS+ GGHVGRARRLATD A+ RRK AL LA A P+ Sbjct: 180 ADSIAKVLRERDGLDPEAAQLAASISGGHVGRARRLATDLNAKVRRKDALDLAVAALRPA 239 Query: 244 RXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLKELE 303 ++A R+E ETEEL+ LK+LE Sbjct: 240 TAFAAAEELVRSADAEAKEMSAARDEQETEELRTALGAGGTGKGAAGALRGSAGVLKDLE 299 Query: 304 KRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXXXPD 363 KRQKSR TR RDALDRALIDLA +RDAL V + +T ANHPDM P+ Sbjct: 300 KRQKSRATRTGRDALDRALIDLAGLYRDALAV-AWKSTAAANHPDMADRAADLASRTTPE 358 Query: 364 RLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 LL+CIEAVLECREA+AVNVKP++AVDAMVA++G A R Sbjct: 359 GLLKCIEAVLECREAIAVNVKPQWAVDAMVASLGDAFR 396 >tr|D0LEI8|D0LEI8_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Gordonia bronchialis] Length = 431 Score = 432 bits (1112), Expect = e-119 Identities = 236/427 (55%), Positives = 276/427 (64%), Gaps = 27/427 (6%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRG-----------------------DSAHSGVATG 37 M+ VF RL GQ A+ +L RG D + Sbjct: 1 MTSVFDRLTGQTAIADDLRSAARAARGLANRLDEGDVGAESMFADTAEQADDVCDAASRA 60 Query: 38 TMTHAWLITGPPGSGRSVAALCFAAALQCTSDGVP--GCGECRACTTTMAGTHADVRRIV 95 +MTH+WL TGPPGSGRSVAA CFAAALQC +D GCG+CRAC T MAGTHADVR I Sbjct: 61 SMTHSWLFTGPPGSGRSVAATCFAAALQCQADDPADIGCGQCRACVTVMAGTHADVRSIA 120 Query: 96 PEGLSIAVKEMREIVQIASRRPGTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFL 155 P+GL+++VK MREIVQ ASRRPGTGRWQ+V++EDADRLTE AANALLKVVEEPP TVFL Sbjct: 121 PDGLTLSVKSMREIVQTASRRPGTGRWQIVIVEDADRLTEQAANALLKVVEEPPSRTVFL 180 Query: 156 LCAPSVDPEDIAITLRSRCRHIALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGR 215 LCAPSVDP+DI++TLRSRCRH+ALT+PS+ I VL+ DG+ P A WAASVCGGH+GR Sbjct: 181 LCAPSVDPDDISVTLRSRCRHVALTSPSVADIERVLVDRDGIDPAQAAWAASVCGGHIGR 240 Query: 216 ARRLATDPEARERRKRALGLARDAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEEL 275 ARRLATD +ARE+R+ AL LAR A S + A+ NE E EE+ Sbjct: 241 ARRLATDADAREQREMALRLARAATVDSTAYKAAEELVRTAEAASKAIAAELNEPELEEM 300 Query: 276 KXXXXXXXXXXXXXXXXXXXXXXLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLV 335 K +KELEKRQKSR+TR RD LDRAL+DLA FRDAL+V Sbjct: 301 KTALGAGGTGKGTARAPRGSAGAIKELEKRQKSRETRVGRDVLDRALVDLAALFRDALVV 360 Query: 336 SSGANTVTANHPD-MXXXXXXXXXXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVA 394 GA VT HPD P++LL+C+EAVL CREAL VNVKPKFAVDAMVA Sbjct: 361 GVGAQ-VTPMHPDKADDVVIPMAGFARPEQLLQCVEAVLACREALDVNVKPKFAVDAMVA 419 Query: 395 TIGQALR 401 +IG A+R Sbjct: 420 SIGLAMR 426 >tr|D5UMH5|D5UMH5_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 406 Score = 420 bits (1080), Expect = e-115 Identities = 232/405 (57%), Positives = 268/405 (66%), Gaps = 7/405 (1%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSG----VATGTMTHAWLITGPPGSGRSVA 56 MSGVFSRLVGQ AV EL R A G +A MTHAWL TGPPGSGRSVA Sbjct: 1 MSGVFSRLVGQDAVVAELRAAAEAARDVVASGGTVADLAGSAMTHAWLFTGPPGSGRSVA 60 Query: 57 ALCFAAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRR 116 A AAALQC PGCG CRACTT +AGTHADVR I P+GLSIAVK+MRE+V ASRR Sbjct: 61 ARALAAALQCEDPAEPGCGHCRACTTVLAGTHADVRAIAPDGLSIAVKQMREVVADASRR 120 Query: 117 PGTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRH 176 P G WQ+V+IEDADRLTE A NALLK+VEEPP T+ LLCAP+VDPEDI++TL+SRCRH Sbjct: 121 PSVGHWQIVLIEDADRLTEQAGNALLKMVEEPPAQTIVLLCAPTVDPEDISVTLKSRCRH 180 Query: 177 IALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLA 236 + L TPS AIA VL DG+ E A WAA VCGGHVGRA+RLATDPE++++R++AL +A Sbjct: 181 VPLVTPSAPAIAAVL-ERDGIDAERAAWAAGVCGGHVGRAKRLATDPESQKQRRQALSVA 239 Query: 237 RDAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXX 296 R AAT + AD NE ETEELK Sbjct: 240 R-AATSEGVYGVVEQLLRDAESAAKEINADLNERETEELKTALGAGGTGRGTAGVMRGSA 298 Query: 297 XXLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXX 356 LK+LEKRQK+R TR+ RDALDRALIDLA FRDAL+ SGA VT HPD Sbjct: 299 GQLKDLEKRQKARSTRSVRDALDRALIDLAALFRDALVQGSGAQ-VTLMHPDEAEQTSRL 357 Query: 357 XXXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401 P+ LLRC+E+VL+CREA+ +NVKP A+DAM A + ALR Sbjct: 358 AGYARPEGLLRCVESVLDCREAIDLNVKPVVALDAMAAGVSSALR 402 >tr|D5Y9P1|D5Y9P1_MYCTU Tax_Id=520141 SubName: Full=DNA polymerase III subunit delta;[Mycobacterium tuberculosis T85] Length = 285 Score = 412 bits (1058), Expect = e-113 Identities = 209/276 (75%), Positives = 224/276 (81%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60 MSGVF+RLVGQ AVE EL+ R DSAHS GTMTHAWL+TGPPGSGRSVAALCF Sbjct: 1 MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60 Query: 61 AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120 AAALQCTS G PGCG CRACTTT+AGTHADVRR++PEGLSI V EMR IVQIA+RRP TG Sbjct: 61 AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120 Query: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180 WQ+VVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIA+TLRSRCRH+AL Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180 Query: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240 TPS AIA VL GDGL P+ A WAASV GGHVGRARRLATDP+AR+RR+RALGLARDAA Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240 Query: 241 TPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELK 276 TPSR LTA R E ETEEL+ Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELR 276 >tr|C7MQK6|C7MQK6_SACVD Tax_Id=471857 SubName: Full=DNA polymerase III, delta prime subunit;[Saccharomonospora viridis] Length = 406 Score = 371 bits (952), Expect = e-100 Identities = 203/393 (51%), Positives = 249/393 (63%), Gaps = 3/393 (0%) Query: 4 VFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCFAAA 63 V+S+LVGQ + L + G+MTHAWL TGPPGSGRSVAA FAAA Sbjct: 14 VWSQLVGQEPAVETLSAAAESAAALVSGRTTDPGSMTHAWLFTGPPGSGRSVAARTFAAA 73 Query: 64 LQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTGRWQ 123 LQCT D GCG C+ C TT+AGTHADV+ +VPEGLSI+V EMR +VQ A+RRP TGRWQ Sbjct: 74 LQCTVDA--GCGRCQGCHTTLAGTHADVKLVVPEGLSISVSEMRALVQAAARRPTTGRWQ 131 Query: 124 VVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALTTPS 183 +V+IEDADRLTEGA+NALLK VEEPP TVFLLCAPS P+DI+IT+RSRCR + L TPS Sbjct: 132 IVIIEDADRLTEGASNALLKAVEEPPERTVFLLCAPSDHPDDISITIRSRCRTVNLRTPS 191 Query: 184 IDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAATPS 243 +AIA VL+ DG+ PE ARWAASVCGGHVGRARRLATD AR RR L + Sbjct: 192 PEAIATVLVERDGIDPERARWAASVCGGHVGRARRLATDENARARRAAVLRIPLGLRRAE 251 Query: 244 RXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLKELE 303 ++ R+E E + L+ ++ LE Sbjct: 252 DVFRCADELISTAEADATEVSKARDEAEQDALRTAMGSGGTGKGVAAAKRAADAAVRALE 311 Query: 304 KRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXXXPD 363 K+QKSR TR RD LD AL+DLA ++RD L++SSG++ NHPD+ P Sbjct: 312 KKQKSRATRTQRDTLDLALMDLAGFYRDVLVLSSGSD-AALNHPDVAEQAAEAAREWTPV 370 Query: 364 RLLRCIEAVLECREALAVNVKPKFAVDAMVATI 396 LR +EAVL CR+A+A NVKP+ AV+AM+ T+ Sbjct: 371 STLRRLEAVLACRDAIAWNVKPRVAVEAMLTTL 403 >tr|A4F6Q3|A4F6Q3_SACEN Tax_Id=405948 (holB)SubName: Full=DNA polymerase III, delta' subunit; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 403 Score = 367 bits (941), Expect = 2e-99 Identities = 207/399 (51%), Positives = 249/399 (62%), Gaps = 11/399 (2%) Query: 2 SGVFSRLVGQ----HAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAA 57 +GV++ +VGQ + + RG+ A +G MTHAWL TGPPGSGRSVAA Sbjct: 9 TGVWADVVGQPEAVRTLRAAVRAADLLARGEPAPAGA----MTHAWLFTGPPGSGRSVAA 64 Query: 58 LCFAAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRP 117 FAAALQCTS GCG C AC T AGTHADVR +VPEGLSI+V EMR +VQ ++RRP Sbjct: 65 RSFAAALQCTSG--EGCGHCSACRTVQAGTHADVRVVVPEGLSISVSEMRSLVQASARRP 122 Query: 118 GTGRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHI 177 TG+W+VV+IED+DRLTEGA+NALLK VEEPP TVFLLCAPS PED+++T+RSRCR + Sbjct: 123 TTGQWRVVLIEDSDRLTEGASNALLKAVEEPPDRTVFLLCAPSDHPEDVSVTIRSRCRVV 182 Query: 178 ALTTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLAR 237 L TP DAIA+VL DG+ P A+WAASV GGH+GRARRLATD EARERR+ L + Sbjct: 183 QLKTPRPDAIAEVLAERDGIEPRMAQWAASVSGGHIGRARRLATDGEARERREAVLSVPL 242 Query: 238 DAATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXX 297 S DRNE E EEL+ Sbjct: 243 GLRRFSDVFTAAGGLVKASETDAVAANEDRNEAEKEELRTAMGAGGTGKGTAAATRGANA 302 Query: 298 XLKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXX 357 ++ELEKRQKSR TR+ RDALD AL+DLA ++RD L+V SG +T NHPD Sbjct: 303 AIRELEKRQKSRATRSQRDALDLALVDLAGFYRDVLVVRSG-STAALNHPDFARSVSKAA 361 Query: 358 XXXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATI 396 + LR +EAVL CR AL NVKP AV+AM A + Sbjct: 362 AEWTSESTLRRLEAVLACRLALTQNVKPIIAVEAMAAAL 400 >tr|C8X989|C8X989_NAKMY Tax_Id=479431 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Nakamurella multipartita] Length = 412 Score = 354 bits (909), Expect = 1e-95 Identities = 193/393 (49%), Positives = 240/393 (61%), Gaps = 7/393 (1%) Query: 4 VFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCFAAA 63 VF L+GQ +EL GD GV MTHAWL TGP GSGRSVAA FAAA Sbjct: 17 VFDDLIGQQHAIEELSLAVAASHGDP---GVPGAAMTHAWLFTGPAGSGRSVAARAFAAA 73 Query: 64 LQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTGRWQ 123 LQC G CG C C T A TH+DVR ++PEGL+I+VKEMR++VQ+A+R P GR+Q Sbjct: 74 LQCADRG---CGHCSHCRTVAAHTHSDVRAVIPEGLTISVKEMRQVVQLAARSPAAGRYQ 130 Query: 124 VVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALTTPS 183 +V+IEDADRLTEGA+NALLK VEEP TVFLLCAPS P+D+++T+RSRCR + L TPS Sbjct: 131 IVLIEDADRLTEGASNALLKAVEEPAEHTVFLLCAPSTHPDDVSVTIRSRCRVVGLRTPS 190 Query: 184 IDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAATPS 243 AIADVL DG+ PE A WAASV GHVGRARRLA D +ARE+R++ L L A+ + Sbjct: 191 APAIADVLARRDGVDPETAHWAASVAAGHVGRARRLARDEQAREQRRQVLALPTSLASVA 250 Query: 244 RXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXLKELE 303 ++ R+ E EELK +KE+E Sbjct: 251 DVFEQSAELLARAKGEASSMSQTRDAAEIEELKTALGAGGTGKGAVGAARGSAGVVKEME 310 Query: 304 KRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMXXXXXXXXXXXXPD 363 +RQKSR TR RD LDRAL+DL+ ++RD L S G+ N PDM PD Sbjct: 311 RRQKSRATRTERDVLDRALVDLSGFYRDVLARSLGSTAPLLN-PDMPGQVDAVAKRLGPD 369 Query: 364 RLLRCIEAVLECREALAVNVKPKFAVDAMVATI 396 L ++AVL CREA+ +NVKP+ A++AMV + Sbjct: 370 GALAAVDAVLACREAIELNVKPQIAIEAMVMAL 402 >tr|D2S790|D2S790_GEOOG Tax_Id=526225 SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7;[Geodermatophilus obscurus] Length = 386 Score = 341 bits (875), Expect = 9e-92 Identities = 195/398 (48%), Positives = 244/398 (61%), Gaps = 18/398 (4%) Query: 1 MSGVFSRLVGQHAVEQELVXXXXXXRGDSAHSGVATGT-MTHAWLITGPPGSGRSVAALC 59 MSGV+ +++GQ AV EL + VA T MTHAWL TGPPGSGRSVAA Sbjct: 1 MSGVWEQVIGQSAVVAEL------------QAAVADPTAMTHAWLFTGPPGSGRSVAARA 48 Query: 60 FAAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGT 119 FAAALQC DG G G C AC T +AGTHADV+ +VPEGLSI V E+RE+V+IA R P Sbjct: 49 FAAALQCP-DG--GDGTCHACRTVLAGTHADVQTVVPEGLSIGVAEVRELVRIAGRAPSQ 105 Query: 120 GRWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIAL 179 GRWQVV++EDADR+TE A+N +LK++EEPP TVFLLCAPS+ P+D+ +T+RSRCR + L Sbjct: 106 GRWQVVLVEDADRMTEQASNTVLKMLEEPPARTVFLLCAPSLHPDDVPVTIRSRCRVVGL 165 Query: 180 TTPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDA 239 TP +DA+ADVL+ DG+ P A W+A+ GGHVGRAR LA D AR RK L + Sbjct: 166 RTPPVDAVADVLVRRDGVDPALAAWSAAAAGGHVGRARHLARDETARLARKAVLDVPLSL 225 Query: 240 ATPSRXXXXXXXXXXXXXXXXXXLTADRNENETEELKXXXXXXXXXXXXXXXXXXXXXXL 299 + + + + + ETE +K L Sbjct: 226 VSLAACLNAADDLVGAAKEESDRASTELDGAETEAVK-QSLGVGARGPGVAAASRGAGQL 284 Query: 300 KELEKRQKSRQTRASRDALDRALIDLATYFRDALLV-SSGANTVTANHPDMXXXXXXXXX 358 KELEKRQKSR TR RD+LDRAL+DLA +RDAL+V +SG VT HPD Sbjct: 285 KELEKRQKSRATRLGRDSLDRALVDLAALYRDALVVATSGTEGVTLAHPDRRADAEELAR 344 Query: 359 XXXPDRLLRCIEAVLECREALAVNVKPKFAVDAMVATI 396 P+ LR I+AVL+CR AL NVKP+ AV+A+ + Sbjct: 345 RIGPEGALRRIDAVLDCRRALEQNVKPQVAVEALTVAL 382 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.319 0.132 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,745,606,176 Number of extensions: 103442800 Number of successful extensions: 329103 Number of sequences better than 10.0: 4896 Number of HSP's gapped: 324338 Number of HSP's successfully gapped: 5065 Length of query: 402 Length of database: 4,236,830,644 Length adjustment: 140 Effective length of query: 262 Effective length of database: 2,485,729,684 Effective search space: 651261177208 Effective search space used: 651261177208 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 82 (36.2 bits)